András Perczel
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Hungarian chemist and researcher
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Chemistry
András Perczel's Degrees
- PhD Chemistry Eötvös Loránd University
Why Is András Perczel Influential?
(Suggest an Edit or Addition)According to Wikipedia, András Perczel is a Hungarian chemist, biochemist, university professor, an elected member of the Hungarian Academy of Sciences. His major field of research is structural chemistry and biology including synthesis of biomolecules and NMR spectroscopy of peptides and proteins. He was awarded the Bolyai prize in 2011.
András Perczel's Published Works
Number of citations in a given year to any of this author's works
Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- Analysis of the circular dichroism spectrum of proteins using the convex constraint algorithm: a practical guide. (1992) (381)
- Convex constraint analysis: a natural deconvolution of circular dichroism curves of proteins. (1991) (303)
- Peptide models. 1. Topology of selected peptide conformational potential energy surfaces (glycine and alanine derivatives) (1991) (207)
- Natively unfolded tubulin polymerization promoting protein TPPP/p25 is a common marker of alpha-synucleinopathies (2004) (142)
- Mutation-dependent recessive inheritance of NPHS2-associated steroid-resistant nephrotic syndrome (2014) (129)
- NMR studies of a viral protein that mimics the regulators of complement activation. (1997) (127)
- Vicinal disulfide turns. (2003) (115)
- Differentiation between transmembrane helices and peripheral helices by the deconvolution of circular dichroism spectra of membrane proteins (1992) (112)
- Deconvolution of the circular dichroism spectra of proteins: The circular dichroism spectra of the antiparallel β‐sheet in proteins (1992) (102)
- Conformational analysis of pseudocyclic hexapeptides based on quantitative circular dichroism (CD), NOE, and x-ray data. The pure CD spectra of type I and type II .beta.-turns (1991) (101)
- The evaluation of type I and type II beta-turn mixtures. Circular dichroism, NMR and molecular dynamics studies. (2009) (93)
- Peptide models 6. New .beta.-turn conformations from ab initio calculations confirmed by x-ray data of proteins (1993) (84)
- Characterization of β‐turns in cyclic hexapeptides in solution by fourier transform IR spectroscopy (1993) (81)
- Membrane translocation of penetratin and its derivatives in different cell lines (2003) (79)
- CD and Fourier transform ir spectroscopic studies of peptides. II. Detection of β‐turns in linear peptides (1994) (78)
- alpha- and 3(10)-helix interconversion: a quantum-chemical study on polyalanine systems in the gas phase and in aqueous solvent. (2001) (68)
- Metal ion-induced conformational changes of phosphorylated fragments of human neurofilament (NF-M) protein. (1992) (66)
- Alternatively spliced exon B of myosin Va is essential for binding the tail-associated light chain shared by dynein. (2006) (64)
- Peptide Models. 3. Conformational Potential Energy Hypersurface of Formyl-l-valinamide (1993) (63)
- Peptide models. XXXIII. Extrapolation of low‐level Hartree–Fock data of peptide conformation to large basis set SCF, MP2, DFT, and CCSD(T) results. The Ramachandran surface of alanine dipeptide computed at various levels of theory (2003) (59)
- Structure and stability of β‐pleated sheets * (2005) (58)
- Peptide models 4. Topological features of molecular mechanics and ab initio 2D-ramachandran maps: Conformational data for for-Gly-NH2, for-l-Ala-NH2, Ac-l-Ala-NHMe and for-l-Val-NH2 (1993) (57)
- Dead-end street of protein folding: thermodynamic rationale of amyloid fibril formation. (2007) (56)
- Cooperation between a salt bridge and the hydrophobic core triggers fold stabilization in a Trp-cage miniprotein. (2008) (55)
- The Mechanism of the Reverse Recovery Step, Phosphate Release, and Actin Activation of Dictyostelium Myosin II* (2008) (53)
- Structural insights into the Trp-cage folding intermediate formation. (2013) (50)
- A matrix isolation study on Ac-Gly-NHMe and Ac-l-Ala-NHMe, the simplest chiral and achiral building blocks of peptides and proteins. (2007) (49)
- Peptide models XV. The effect of basis set size increase and electron correlation on selected minima of the ab initio 2D-Ramachandran map of For-Gly-NH2 and For-l-Ala-NH2 (1997) (49)
- Local structural preferences of calpastatin, the intrinsically unstructured protein inhibitor of calpain. (2008) (48)
- Conformation dependence of pKa: Ab initio and DFT investigation of histidine (2004) (47)
- Peptide and protein folding (2001) (46)
- Toward a computed peptide structure database: The role of a universal atomic numbering system of amino acids in peptides and internal hierarchy of database (2002) (45)
- Extended intermolecular interactions in a serine protease-canonical inhibitor complex account for strong and highly specific inhibition. (2005) (43)
- Phosphorylation loops in synthetic peptides of the human neurofilament protein middle-sized subunit (1988) (43)
- Investigation of penetratin peptides Part 1. The environment dependent conformational properties of penetratin and two of its derivatives (2002) (42)
- Solubilization of beta-amyloid-(1-42)-peptide: reversing the beta-sheet conformation induced by aluminum with silicates. (1995) (41)
- Peptide models. IX. A complete conformational set of For-Ala-Ala-NH2 from ab inito computations (1994) (41)
- The importin-beta P446L dominant-negative mutant protein loses RanGTP binding ability and blocks the formation of intact nuclear envelope. (2002) (41)
- Peptide models. 18. Hydroxymethyl side-chain induced backbone conformational shifts of L-serine amide. All ab initio conformers of For-L-Ser-NH2 (1996) (40)
- Stable intrachain and interchain complexes of neurofilament peptides: a putative link between Al3+ and Alzheimer disease. (1994) (39)
- Full backbone assignment and dynamics of the intrinsically disordered dehydrin ERD14 (2011) (39)
- Cooperativity of carbohydrate moiety orientation and β‐ turn stability is determined by intramolecular hydrogen bonds in protected glycopeptide models (1990) (37)
- PEPTIDE MODELS XXII. A CONFORMATIONAL MODEL FOR AROMATIC AMINO ACID RESIDUES IN PROTEINS. A COMPREHENSIVE ANALYSIS OF ALL THE RHF/6-31+G CONFORMERS OF FOR-L-PHE-NH2 (1998) (37)
- Determining the Molecular Basis for the pH-dependent Interaction between the Link Module of Human TSG-6 and Hyaluronan*♦ (2007) (37)
- The Piwi‐piRNA pathway: road to immortality (2017) (36)
- Toward a rational design of β‐peptide structures (2006) (36)
- Peptide models XX. Aromatic side-chain–backbone interaction in phenylalanine-containing diamide model system. A systematic search for the identification of all the ab initio conformers of N-formyl-L-phenylalanine-amide (1997) (36)
- Peptide models XIX: Side-chain conformational energy surface and amide I vibrational frequencies of N-formyl-l-phenylalaninamide (For-Phe-NH2) in its γL or γinv or C7eq backbone conformation (1996) (36)
- Comparative structure analysis of proteinase inhibitors from the desert locust, Schistocerca gregaria. (2002) (36)
- Disordered TPPP/p25 binds GTP and displays Mg2+‐dependent GTPase activity (2011) (35)
- Peptide models XIII. Side-chain conformational energy surface E = E( ? 1, ? 2) of N- formyl- l- seri (1995) (35)
- Cooperativity network of Trp‐cage miniproteins: probing salt‐bridges (2011) (34)
- Peptide models XXIX. cis-trans Isomerism of peptide bonds: ab initio study on small peptide model compound; the 3D-Ramachandran map of formylglycinamide (2000) (34)
- Theoretical Study on Tertiary Structural Elements of β-peptides: Nanotubes Formed from Parallel-Sheet-Derived Assemblies of β-Peptides (2006) (33)
- Journal of Molecular Structure: Theochem - Preface (2004) (33)
- Estimating intrinsic structural preferences of de novo emerging random‐sequence proteins: Is aggregation the main bottleneck? (2012) (32)
- Vicinal disulfide bridge conformers by experimental methods and by ab initio and DFT molecular computations (2004) (32)
- Calcium‐induced tripartite binding of intrinsically disordered calpastatin to its cognate enzyme, calpain (2008) (31)
- Solvation model induced structural changes in peptides. A quantum chemical study on Ramachandran surfaces and conformers of alanine diamide using the polarizable continuum model (2004) (31)
- Characteristics of Ramachandran maps of L-alanine diamides as computed by various molecular mechanics, semiempirical and ab initio MO methods.: A search for primary standard of peptide conformational stability (1998) (31)
- Peptide models XXIII. Conformational model for polar side‐chain containing amino acid residues: A comprehensive analysis of RHF, DFT, and MP2 properties of HCO‐L‐SER‐NH2 (2000) (31)
- Charged single alpha-helices in proteomes revealed by a consensus prediction approach. (2012) (30)
- Zn²+-induced rearrangement of the disordered TPPP/p25 affects its microtubule assembly and GTPase activity. (2011) (29)
- On the flexibility of β‐peptides (2004) (28)
- Peptide models XVI. The identification of selected HCO—L—SER—NH2 conformers via a systematic grid search using ab initio potential energy surfaces (1996) (28)
- Folded‐unfolded cross‐predictions and protein evolution: The case study of coiled‐coils (2010) (27)
- Intrinsically stable secondary structure elements of proteins: a comprehensive study of folding units of proteins by computation and by analysis of data determined by X-ray crystallography. (2003) (27)
- Peptide models 5. Topological features of molecular mechanics and ab initio 4D-Ramachandran maps (1993) (26)
- An exploratory ab initio study of the full conformational space of N-acetyl-l-cysteine-N-methylamide (2001) (26)
- The Structure of the Complex of Calmodulin with KAR-2 (2005) (26)
- Secondary structure of short β-peptides as the chiral expression of monomeric building units: a rational and predictive model. (2012) (26)
- Prospects in computational molecular medicine: a millennial mega-project on peptide folding (2000) (26)
- Searching for the simplest structural units to describe the three-dimensional structure of proteins (1995) (26)
- Peptide models XXV. Side-chain conformational potential energy surface, E = E(χ1, χ2) of N-formyl-L-aspartic acidamide and its conjugate base N- formyl-L-aspartatamide in their γ(L) backbone conformations (2000) (25)
- Synthesis and conformational analysis of N‐glycopeptides. II. CD, molecular dynamics, and nmr spectroscopic studies on linear N‐glycopeptides (1993) (25)
- How reverse turns may mediate the formation of helical segments in proteins: an x-ray model. (1992) (24)
- Structure, enzymatic stability and antitumor activity of sea lamprey GnRH-III and its dimer derivatives (2007) (24)
- Peptide models XXXVIII. Proline conformers from X-ray crystallographic database and from ab initio computations (2002) (23)
- How stable is a collagen triple helix? An ab initio study on various collagen and β‐sheet forming sequences (2008) (23)
- Reconciling the lock‐and‐key and dynamic views of canonical serine protease inhibitor action (2010) (23)
- Coupling strategies in solid-phase synthesis of glycopeptides. (1989) (22)
- A nomenclature of peptide conformers (2004) (22)
- Study of Al3+ binding and conformational properties of the alanine-substituted C-terminal domain of the NF-M protein and its relevance to Alzheimer's disease. (1994) (22)
- Hyperfine-Shifted 13C Resonance Assignments in an Iron−Sulfur Protein with Quantum Chemical Verification: Aliphatic C−H···S 3-Center−4-Electron Interactions (2011) (22)
- Intrinsic structural disorder of DF31, a Drosophila protein of chromatin decondensation and remodeling activities. (2008) (22)
- Peptide models. 17. The role of the water molecule in peptide folding. An ab initio study on the right-handed helical conformations of N-formylglycinamide and N-formyl-L-alaninamide monohydrates [H(CONH-CHR-CONH)H·H2O; R = H or CH3] (1995) (22)
- Peptide models XI. Substitution effects on peptide chains. The magnitude of side-chain–backbone interactions in oligopeptides HCO-(NHCHRCO)n-NH2 for R=CH3. An ab initio study (1995) (22)
- Same fold with different mobility: backbone dynamics of small protease inhibitors from the desert locust, Schistocerca gregaria. (2004) (21)
- Turns in small cyclic peptides — can infrared spectroscopy detect and discriminate amongst them? (1994) (21)
- A study on the backbone/side-chain interaction in N-formyl-(L)serineamide (1990) (21)
- Toward direct determination of conformations of protein building units from multidimensional NMR experiments I. A theoretical case study of For‐Gly‐NH2 and For‐L‐Ala‐NH2 (2000) (21)
- Major human γ-aminobutyrate transporter: In silico prediction of substrate efficacy (2007) (20)
- Challenging drug target for Parkinson's disease: Pathological complex of the chameleon TPPP/p25 and alpha-synuclein proteins. (2017) (20)
- Side-chain conformational analysis of N-formyl-?-asparaginamide and N-acetyl-?-asparagine N-methylamide in their γ? backbone conformation (2000) (20)
- Pseudouridylation defect due to DKC1 and NOP10 mutations causes nephrotic syndrome with cataracts, hearing impairment, and enterocolitis (2020) (20)
- Peptide models XXXI. Conformational properties of hydrophobic residues shaping the core of proteins. An ab initio study of N‐formyl‐L‐valinamide and N‐formyl‐L‐phenylalaninamide (2001) (19)
- Role of water in protein folding, oligomerization, amyloidosis and miniprotein (2014) (19)
- Rational design of α-helix-stabilized exendin-4 analogues. (2014) (18)
- 1H, 15N backbone assignment and comparative analysis of the wild type and G12C, G12D, G12V mutants of K-Ras bound to GDP at physiological pH (2019) (18)
- A matrix isolation study on Ac–l-Pro–NH2: a frequent structural element of β- and γ-turns of peptides and proteins (2008) (18)
- Protein Dynamics as Reported by NMR (2010) (18)
- Stability of the hydration layer of tropocollagen: A QM study (2009) (17)
- Peptide models XXVII. An exploratory ab initio study on the 21st amino acid side-chain conformations of N-formyl-L-selenocysteinamide (For-L-Sec-NH2) and N-acetyl-L-selenocysteine-N-methylamide (Ac-L-Sec-NHMe) in their γL backbone conformation (2000) (17)
- Relative stability of major types of beta-turns as a function of amino acid composition: a study based on Ab initio energetic and natural abundance data. (2003) (17)
- CoNSEnsX: an ensemble view of protein structures and NMR-derived experimental data (2010) (17)
- Peptide models VII The ending of the right-handed helices in oligopeptides [For-(Ala)n-NH2 for 2 ⩽ n ⩽ 4] and in proteins (1995) (17)
- Multidimensional NMR Identifies the Conformational Shift Essential for Catalytic Competence in the 60-kDa Drosophila melanogaster dUTPase Trimer* (2004) (17)
- Peptide Models 10. Topological features of molecular mechanics and ab initio 6D-Ramachandran maps. Conformational data for Ac-l-Ala-l-Ala-l-Ala-NHMe andFor-l-Ala-l-Ala-l-Ala-NH2 (1994) (17)
- Phosphorylation as conformational switch from the native to amyloid state: Trp-cage as a protein aggregation model. (2015) (17)
- A simple fold with variations: the pacifastin inhibitor family (2004) (16)
- Exploration of the Four-Dimensional-Conformational Potential Energy Hypersurface of N-Acetyl-L-aspartic Acid N'-Methylamide with Its Internally Hydrogen Bonded Side-Chain Orientation (2002) (16)
- Chiral and achiral fundamental conformational building units of beta-peptides: a matrix isolation conformational study on Ac-beta-HGly-NHMe and Ac-beta-HAla-NHMe. (2009) (16)
- An ab initio exploratory study of side chain conformations for selected backbone conformations of N-acetyl-l-glutamine-N-methylamide (2001) (16)
- Peptide models XXI. Side-chain/backbone conformational interconversions in HCO-l-Ser-NH2. Tracing relaxation paths by ab initio modeling. An exploratory study (1998) (16)
- Synthesis, solution structure analysis and antibody binding of cyclic epitope peptides from glycoprotein D of Herpes simplex virus type I. (2003) (15)
- DYNLL2 dynein light chain binds to an extended linear motif of myosin 5a tail that has structural plasticity. (2014) (15)
- DUckCov: a Dynamic Undocking‐Based Virtual Screening Protocol for Covalent Binders (2019) (15)
- Peptide models XLV: Conformational properties of N‐formyl‐L‐methioninamide and its relevance to methionine in proteins (2004) (15)
- Side-chain conformations for selected backbone conformations of N-acetyl-l-isoleucine-N-methylamide and N-acetyl-l-nor-isoleucine-N-methylamide. An exploratory ab initio study (2001) (15)
- Bacterial expression and/or solid phase peptide synthesis of 20-40 amino acid long polypeptides and miniproteins, the case study of Class B GPCR ligands. (2016) (15)
- Ca2+‐induced conformational transitions of phosphorylated peptides (1993) (15)
- Peptide models. XIV. Ab initio study on the role of side-chain backbone interaction stabilizing the building unit of right- and left-handed helices in peptides and proteins (1997) (15)
- Peptide models 8. The use of a modified Romberg formalism for the extrapolation of molecular properties from oligomers to polymers. Polyalanine diamide in its “extended like” or (βL)n or (C5)n conformation (1994) (14)
- Penetratin analogues acting as antifungal agents. (2011) (14)
- Stability issues of covalently and noncovalently bonded peptide subunits (2004) (13)
- Extended apolar beta-peptide foldamers: the role of axis chirality on beta-peptide sheet stability. (2010) (13)
- Conformational effects of one glycine residue on the other glycine residues in the Ac-Gly-Gly-Gly-NHMe tripeptide motif: an ab initio exploratory study (2002) (13)
- C-terminal oligomerization of podocin mediates interallelic interactions. (2018) (13)
- Peptide Conformational Potential Energy Surfaces and their Relevance to Protein Folding (1992) (13)
- Multiple fuzzy interactions in the moonlighting function of thymosin-β4 (2013) (13)
- Development of cyclic NGR peptides with thioether linkage: structure and dynamics determining deamidation and bioactivity. (2015) (13)
- Catalytic mechanism of α-phosphate attack in dUTPase is revealed by X-ray crystallographic snapshots of distinct intermediates, 31P-NMR spectroscopy and reaction path modelling (2013) (13)
- Use of a modified romberg formalism for the extrapolation of molecular properties from oligomers to polymers. Polyalanine diamide in its (γL)n or (C7)n conformation (1993) (12)
- Generation and analysis of the conformational potential energy surfaces of N-acetyl-N-methyl-l-alanine-N′-methylamide. An exploratory ab initio study (2003) (12)
- Peptide models XII Topological features of molecular mechanics and ab-initio 8D-Ramachandran maps. Conformational data for Ac-(l-Ala)4-NHMe and For-(l-Ala)4-NH2 (1995) (12)
- Structural impact of GTP binding on downstream KRAS signaling† (2020) (12)
- Deciphering factors which determine the Ramachandran surface of peptides. The application of isodesmic surfaces, Δ E ID ( ϕ , ψ ), to analyze the contribution of rotating moieties to the shape of potential energy surfaces (2000) (12)
- Novel nontoxic heat shock protein 90 inhibitors having selective antiproliferative effect. (2006) (12)
- Ab initio conformational space study of model compounds of O-glycosides of serine diamide. (2002) (12)
- Foldamers of β-peptides: conformational preference of peptides formed by rigid building blocks. The first MI-IR spectra of a triamide nanosystem (2013) (11)
- Peptide model XXVIII: An exploratory ab initio and density functional study on the side-chain-backbone interaction in N-acetyl-L-cysteine- N-methylamide and N-formyl-L-cysteinamide in their γL-backbone conformations (2002) (11)
- Ab initio analysis of the conformational changes of the prolyl-proline model peptide (2003) (11)
- α/β-Chimera peptide synthesis with cyclic β-sugar amino acids: the efficient coupling protocol (2019) (11)
- Conformational analysis and structural study by ab initio gradient geometry optimizations of the model tripeptide N-formyl L-alanyl L-alanine amide (1993) (11)
- Major human gamma-aminobutyrate transporter: in silico prediction of substrate efficacy. (2007) (11)
- A theoretical comparison of self-assembling alpha- and beta-peptide nanostructures: toward design of beta-barrel frameworks. (2008) (11)
- Prolylproline unit in model peptides and in fragments from databases (2007) (11)
- Peptide models XXXIV. Side-chain conformational potential energy surfaces associated with all major backbone folds of neutral tautomers of N- and C-protected l-histidine. An ab initio study on ethylimidazole and N-formyl-l-histidinamide (2002) (10)
- A search for the ideal type I β-turn (1996) (10)
- An exploratory study of side-chain–backbone interaction in selected conformations of N-acetyl-l-glutamate-N-methylamide. An ab initio study (2001) (10)
- Foldamer Stability Coupled to Aggregation Propensity of Elongated Trp‐Cage Miniproteins (2013) (10)
- Analysis of hydrogen bonds in peptides, based on the hydration affinity of amides (1993) (10)
- The inherent flexibility of peptides and protein fragments quantitized by CD in conjunction with CCA+ (2009) (10)
- Penetratin and Derivatives Acting as Antibacterial Agents (2013) (10)
- C-3 epimers of sugar amino acids as foldameric building blocks: improved synthesis, useful derivatives, coupling strategies (2017) (10)
- New antifungal peptides. Synthesis, bioassays and initial structure prediction by CD spectroscopy. (2010) (9)
- Fast protein fold estimation from NMR-derived distance restraints (2008) (9)
- The Budapest Amyloid Predictor and Its Applications (2020) (9)
- Binding crevice for TT-232 in a homology model of type 1 somatostatin receptor. (2004) (9)
- Antibody recognition and conformational flexibility of a plaque-specific beta-amyloid epitope modulated by non-native peptide flanking regions. (2008) (9)
- Assessment of Tractable Cysteines for Covalent Targeting by Screening Covalent Fragments (2020) (9)
- Four faces of the interaction between ions and aromatic rings (2017) (9)
- Variation of conformational properties at a glance. True graphical visualization of the Ramachandran surface topology as a periodic potential energy surface (2012) (9)
- An assessment of the chiral environment created by adjacent d- and l-alanyl residues on a glycine unit within the tripeptide N-Ac-Ala-Gly-Ala-NHMe: an ab initio exploratory study (2003) (8)
- Origin of problems related to Staudinger reduction in carbopeptoid syntheses (2016) (8)
- Effect of spectral window size on circular dichroism spectra deconvolution of proteins (1993) (8)
- Intermodule cooperativity in the structure and dynamics of consecutive complement control modules in human C1r (2010) (8)
- A complete set of conformational elements defining secondary structures of proteins (1993) (8)
- Combined NMR three‐bond scalar coupling measurements and QM calculations to calculate OH‐rotamer equilibrium of polyalcohols (2009) (8)
- Protein Aggregation in a Nutshell: The Splendid Molecular Architecture of the Dreaded Amyloid Fibrils. (2019) (8)
- Suggested binding mechanism of the HIV-gp120 to its CD4 receptor (1996) (8)
- Dynamically encoded reactivity of Ras enzymes: opening new frontiers for drug discovery (2020) (8)
- The Route from the Folded to the Amyloid State: Exploring the Potential Energy Surface of a Drug‐Like Miniprotein (2019) (8)
- 2-Acetamido-2-deoxyaldonolactones from sugar formazans (1994) (8)
- A self‐stabilized model of the chymotrypsin catalytic pocket. The energy profile of the overall catalytic cycle (2005) (7)
- New Small-Size Antifungal Peptides: Design, Synthesis and Antifungal Activity (2011) (7)
- FT-IR spectroscopy guided analysis of the circular dichroism spectra of polypeptides (1993) (7)
- Toward direct determination of conformations of protein building units from multidimensional NMR experiments. V. NMR chemical shielding analysis of N‐formyl‐serinamide, a model for polar side‐chain containing peptides (2003) (7)
- Structure-oriented rational design of chymotrypsin inhibitor models. (2003) (7)
- Interplay of Structural Disorder and Short Binding Elements in the Cellular Chaperone Function of Plant Dehydrin ERD14 (2020) (7)
- Potential energy curves, surfaces and hypersurfaces. A model to follow and understand the conformational transformations in amino acids (2004) (7)
- Prediction of folding preference of 10 kDa silk-like proteins using a Lego approach and ab initio calculations. (2006) (7)
- Probing dynamic protein ensembles with atomic proximity measures. (2010) (7)
- Turn conformations in peptides containing the -Xaa-Ser- sequence. (2009) (7)
- Assessment of tractable cysteines by covalent fragments screening. (2020) (7)
- Aromatic Cluster Sensor of Protein Folding: Near-UV Electronic Circular Dichroism Bands Assigned to Fold Compactness. (2016) (7)
- Biochemical and pharmacological characterization of three opioid-nociceptin hybrid peptide ligands reveals substantially differing modes of their actions (2018) (7)
- GETTING TO GRIPS WITH HA-PROTEIN INTERACTIONS (2002) (7)
- Solution state conformation and degradation of cyclopeptides containing an NGR motif (2005) (7)
- Unwanted hydrolysis or α/β-peptide bond formation: how long should the rate-limiting coupling step take? (2019) (6)
- Determining suitable lego-structures to estimate stability of larger peptide nanostructures using computational methods (2006) (6)
- Structure and stability of short beta-peptide nanotubes: a non-natural representative of collagen? (2008) (6)
- Toward a rational design of beta-peptide structures. (2006) (6)
- Peptide models XXXV. Protonated and deprotonated N-formyl-L-histidinamide: an ab initio study on side-chain potential energy surfaces of all major backbone conformers (2002) (6)
- Atropisomerism of the Asn α radicals revealed by Ramachandran surface topology. (2013) (6)
- Polymerization dependence of the entropy of homo-oligomer peptides (2010) (6)
- A theoretical case study of type I and type II β-turns (2003) (6)
- Structure and stability of beta-pleated sheets. (2005) (6)
- Hydration shell differentiates folded and disordered states of a Trp-cage miniprotein, allowing characterization of structural heterogeneity by wide-line NMR measurements (2019) (6)
- Information accumulation in helical oligopeptide structures (2007) (6)
- Breaking and making of the S-S linkage via nucleophilic substitution. An ab initio study (1998) (5)
- Cost-Effective Flow Peptide Synthesis: Metamorphosis of HPLC (2021) (5)
- The Eighth Central European Conference “Chemistry towards Biology”: Snapshot (2016) (5)
- A redesigned genetic code for selective labeling in protein NMR. (2008) (5)
- Synthesis and conformational analysis of the N-glycosylated cyclic peptide: Cyclo[Gly-Pro-Asn(GlcNAc)-GIy-NH-(CH2)4-CO] (1996) (5)
- A conformational comparison of N- and C-protected methionine and N- and C-protected homocysteine (2003) (5)
- Theoretical study on tertiary structural elements of beta-peptides: nanotubes formed from parallel-sheet-derived assemblies of beta-peptides. (2006) (5)
- Small Peptides Derived from Penetratin as Antibacterial Agents (2016) (5)
- The role of entropy in initializing the aggregation of peptides: a first principle study on oligopeptide oligomerization. (2012) (5)
- Local binding with globally distributed changes in a small protease inhibitor upon enzyme binding (2006) (5)
- A new method for the interpretation of dynamics trajectories in the conformational analysis of HIV receptor mutants (1993) (5)
- N-acetyl-L-aspartic acid-N'-methylamide with side-chain orientation capable of external hydrogen bonding (2002) (5)
- Is there an excuse for the non-conformist? Notes on the calculated energies, atom–atom contacts and natural abundance of the different conformers of alanine in proteins (2004) (4)
- Omicron Binding Mode: Contact Analysis and Dynamics of the Omicron Receptor-Binding Domain in Complex with ACE2 (2022) (4)
- iNEXT: a European facility network to stimulate translational structural biology (2018) (4)
- Interaction between separated consecutive complement control modules of human C1r: Implications for dimerization of the full‐length protease (2010) (4)
- AMINO ACID CONFORMATIONAL ANALYSES OF PROTEINS (ACAP PROGRAM) (1996) (4)
- Exploiting diverse stereochemistry of β-amino acids: toward a rational design of sheet-forming β-peptide systems (2012) (4)
- Toward direct determination of conformations of protein building units from multidimensional NMR experiments VI. Chemical shift analysis of his to gain 3D structure and protonation state information (2005) (4)
- A theoretical study of the stability of disulfide bridges in various β-sheet structures of protein segment models (2014) (4)
- The Route from the Folded to the Amyloid State: Exploring the Potential Energy Surface of a Drug-Like Miniprotein. (2020) (3)
- Can NO2+ exist in bent or cyclic forms? (2001) (3)
- Impairment of a model peptide by oxidative stress: Thermodynamic stabilities of asparagine diamide Cα-radical foldamers (2014) (3)
- Peptide models XXIII. Conformational model for polar side-chain containing amino acid residues: A comprehensive analysis of RHF, DFT, and MP2 properties of HCO-L-SER-NH2 (2000) (3)
- Approaches to Pyranuronic β‐Sugar Amino Acid Building Blocks of Peptidosaccharide Foldamers (2018) (3)
- Transformation of aldose formazans. Novel synthesis of 2-acetamido-2-deoxypentonolactones and a new pent-2-enose formazan. (2011) (3)
- pKa optimized catalysis in serine proteinases, an ab initio study on the catalaytic His (2007) (3)
- The Importance of Mg2+‐Free State in Nucleotide Exchange of Oncogenic K‐Ras Mutants (2022) (3)
- Peptide models XLII. Ab initio study on conformational changes of N-formyl-l-histidinamide caused by protonation or deprotonation of its side chain (2004) (3)
- Compactness of Protein Folds Alters Disulfide‐Bond Reducibility by Three Orders of Magnitude: A Comprehensive Kinetic Case Study on the Reduction of Differently Sized Tryptophan Cage Model Proteins (2019) (3)
- Zipper-like unfolding of β-sheets accessed by pioneer water molecules: Atomic resolution of forced unfold reveals different mechanisms for parallel and antiparallel motifs (2010) (3)
- Peptide models XXXII. Computed chemical shift analysis of penetratin fragments (2004) (3)
- Helix compactness and stability: Electron structure calculations of conformer dependent thermodynamic functions (2013) (2)
- On the flexibility of beta-peptides. (2004) (2)
- Bacterial fermentation and isotope labelling optimized for amyloidogenic proteins (2021) (2)
- Engineering new peptidic inhibitors from a natural chymotrypsin inhibitor (2002) (2)
- Quantum Chemical Calculations on Small Protein Models (2014) (2)
- A search for the ideal type I beta-turn. (1996) (2)
- Predictable Conformational Diversity in Foldamers of Sugar Amino Acids (2017) (2)
- Structural Water Stabilizes Protein Motifs in Liquid Protein Phase: The Folding Mechanism of Short β-Sheets Coupled to Phase Transition (2021) (2)
- Hydrogen‐Bonding Network Anchors the Cyclic Form of Sugar Arylhydrazones (2016) (1)
- Peptide models XVI. The identification of selected HCO - L - SER - NH2 conformers via a systematic grid search using ab initio potential energy surfaces (1996) (1)
- DYNLL2 dynein light chain binds to an extended, unstructured linear motif of myosin 5a tail (2014) (1)
- Off-pathway 3D-structure provides protection against spontaneous Asn/Asp isomerization: shielding proteins Achilles heel (2020) (1)
- How weak an acid can be? Variations of H-bond and/or van der Waals Interaction of Weak Acids (2017) (1)
- Local protein backbone folds determined by calculated NMR chemical shifts (2011) (1)
- Protein structure and dynamics (2014) (1)
- Aromatic cluster sensor of protein folding: near-UV ECD bandsassigned to fold compactness (2016) (1)
- Configuration controlled crystal and/or gel formation of protected D-Glucosamines supported by promiscuous interaction surfaces and a conformationally heterogeneous solution state. (2020) (1)
- Stable intrachain and interchain complexes of neurofilament peptides : A putative link between A 13 + and Alzheimer disease ( phosphorylated derivatdves / conformatonal changes / rcular dichrolsm ) MIKL 6 (1)
- Synthesis of chimera oligopeptide including furanoid β-sugar amino acid derivatives with free OHs: mild but successful removal of the 1,2-O-isopropylidene from the building block (2021) (1)
- Assignment of vibrational circular dichroism cross-referenced electronic circular dichroism spectra of flexible foldamer building blocks: towards assigning foldamers’ pure chiroptical properties (2019) (1)
- The clear and dark sides of water: influence on the coiled coil folding domain (2016) (1)
- On the unexpected formation of a new dioxopiperazine containing carbohydrate side-chains: an X-ray study (1989) (1)
- An exploratory study on the oxo-enol tautomerization of selected dioxopiperazines and their sulphur-containing analogues (1993) (1)
- Directed Evolution-Driven Increase of Structural Plasticity Is a Prerequisite for Binding the Complement Lectin Pathway Blocking MASP-Inhibitor Peptides (2022) (1)
- Solution Structure and Acid‐Base Properties of Reduced α‐Conotoxin MI (2021) (1)
- Corrigendum to “Calcium‐induced tripartite binding of intrinsically disordered calpastatin to its cognate enzyme, calpain” [FEBS Lett. 582 (2008) 2149–2154] (2008) (1)
- Designed Exendin-4 analogues (2014) (1)
- Succinct Amyloid and Nonamyloid Patterns in Hexapeptides (2022) (1)
- Assignment of Vibrational Circular Dichroism Cross‐Referenced Electronic Circular Dichroism Spectra of Flexible Foldamer Building Blocks: Towards Assigning Pure Chiroptical Properties of Foldamers (2019) (1)
- Synthesis of the extracellular domain of GLP-1R by chemical and biotechnological approaches (2022) (0)
- Studies on Conformational Mixtures of Some Linear and Cyclic Beta-Turn Models Using X-Ray Diffraction, NMR, Circular Dichroism Spectroscopic Methods and Molecular Dynamics, (1992) (0)
- Proteins’ fold compactness alters disulfide-bond reducibility by 3 orders of magnitude: a comprehensive kinetic case study on the reduction of different size Trp-cage model proteins (2019) (0)
- Origin of problems related to Staudinger reduction in carbopeptoid syntheses (2016) (0)
- C-3 epimers of sugar amino acids as foldameric building blocks: improved synthesis, useful derivatives, coupling strategies (2016) (0)
- 1H and 15N assignment of 15N-labeled oncogenic mutant human KRas4B-G12D(1-169) bound to GTP at physiological pH (2020) (0)
- Hydration shell differentiates folded and disordered states of a Trp-cage miniprotein, allowing characterization of structural heterogeneity by wide-line NMR measurements (2019) (0)
- Front Cover: DUckCov: a Dynamic Undocking‐Based Virtual Screening Protocol for Covalent Binders (ChemMedChem 10/2019) (2019) (0)
- The impact of water on the ambivalent behavior and paradoxical phenomenon of the amyloid-β fibril protein (2017) (0)
- α/β-Chimera peptide synthesis with cyclic β-sugar amino acids: the efficient coupling protocol (2019) (0)
- GIAO-PCM Calculations on Alanine Diamide Models Aimed atPredicting Protein Secondary Structures (2012) (0)
- Cryo-EM structure of acylpeptide hydrolase reveals substrate selection by multimerization and a multi-state serine-protease triad (2022) (0)
- Cover Picture: Structural Insights into the Trp‐Cage Folding Intermediate Formation (Chem. Eur. J. 8/2013) (2013) (0)
- Ab Initio Characterization of Building Units in Peptides and Proteins (1999) (0)
- Opening Amyloid-Windows to the Secondary Structure of Proteins: The Amyloidogenecity Increases Tenfold Inside Beta-Sheets (2022) (0)
- Synthesis of linear and branched functional polymers by quasiliving polymerizations and chemical modifications (2017) (0)
- Searching for the Simplest Structural Units to Describe the Three- Dimensional Structure of Proteins (1996) (0)
- 2‐Acetamido‐2‐deoxyaldonolactones from Sugar Formazans. (1994) (0)
- Identification of molecular components underlying optical signals applied for spatiotemporal neural activity mapping (2016) (0)
- SOLUTION STRUCTURE OF THE SMALL SERINE PROTEASE INHIBITOR SGCI[L30R, K31M] (2001) (0)
- 1H and 15N assignment of 15N-labeled wildtype human KRas4B(1-169) bound to GTP at physiological pH (2020) (0)
- MP031THE MUTATION-DEPENDENT PATHOGENICITY OF THE NPHS2 R229Q VARIANT (2016) (0)
- Dynamics of small, folded proteins (2014) (0)
- [Allele-specific inhibitors of mutant KRAS are in the focus of RASopathy consortium]. (2019) (0)
- DISTINGUISIDNG TRANSMEMBRANE HELICES FROM PERIPHERAL HELICES BY CIRCULAR DICHROISM (0)
- The synthesis, oxidation and characterization of GLP-1 peptide receptor fragments (2018) (0)
- Protein structure and evolution in the light of flexibility (2012) (0)
- A carbapenem antibiotic inhibiting a mammalian serine protease: structure of the acylaminoacyl peptidase–meropenem complex (2022) (0)
- Binding of KAR-2 to a new binding domain of calmodulin and beyond: structure and function (2004) (0)
- A Novel Fusion Protein System for the Production of Nanobodies and the SARS-CoV-2 Spike RBD in a Bacterial System (2023) (0)
- New tools for the new era of NMR spectroscopy (2003) (0)
- Oligomerization mediates interactions of podocin (2019) (0)
- Solution structure of the third helix of Antennapedia homeodomain derivative [W6F,W14F] (2002) (0)
- Back Cover: Aromatic Cluster Sensor of Protein Folding: Near-UV Electronic Circular Dichroism Bands Assigned to Fold Compactness (Chem. Eur. J. 39/2016) (2016) (0)
- FT-IR Spectroscopy Guided Analysis of the Circular Dichroism Spectra of Polypeptides. (1993) (0)
- Structural and dynamical characterization and binding investigation of Calpastatin by NMR spectroscopy (2010) (0)
- D27-LIKE1 carotenoid isomerase has a preference towards trans/cis and cis/cis conversions in Arabidopsis (2022) (0)
- Front Cover: The Route from the Folded to the Amyloid State: Exploring the Potential Energy Surface of a Drug‐Like Miniprotein (Chem. Eur. J. 9/2020) (2020) (0)
- Application of Sugar Amino Acids: Flow chemistry used for α/β‐chimera synthesis (2021) (0)
- Synthesis and structural analysis of C-3 epimeric sugar amino acids and their novel foldamers (2019) (0)
- D27-LIKE1 isomerase has a preference towards trans/cis and cis/cis conversions of carotenoids in Arabidopsis. (2022) (0)
- Exploiting diverse stereochemistry of β-amino acids: toward a rational design of sheet-forming β-peptide systems (2011) (0)
- Podocin Oligomerization Revealed by FRET Analysis: Sites of Interallelic Interactions (2018) (0)
- Solution structure of the third helix of Antennapedia homeodomain (2002) (0)
- SOLUTION STRUCTURE OF THE SMALL SERINE PROTEASE INHIBITOR SGCI (2001) (0)
- Configuration-controlled crystal and/or gel formation of fully protected D-glucosamines (2019) (0)
- 1H Chemical shift assignments of Schistocerca gregaria trypsin inhibitor (2002) (0)
- Flexibility analysis based on NMR studies reveals intensive contact between tandem CCP modules in the C1r complement protease (2007) (0)
- 1H, 13C and 15N chemical shift assignments of Schistocerca gregaria chymotrypsin inhibitor at pH=6.0 (2007) (0)
- Covalent fragment mapping of KRasG12C revealed novel chemotypes with in vivo potency. (2023) (0)
- 1HN, 1HA, 13CA, 13CB, 13CO and 15N Chemical Shift Assignments for Intrinsically Disordered Dehydrin ERD14 (2011) (0)
- From Qualitative to Quantitative Analyses of Circular Dichroism Spectra Using the Convex Constraint Algorithm (1993) (0)
- 1.2A resolution structure of a crayfish trypsin complexed with a peptide inhibitor, SGTI (2005) (0)
- Solution structure of the third helix of Antennapedia homeodomain derivatives (RQIKIWFRKWKK) (2002) (0)
- An Investigation of Cubane Rearrangements (2013) (0)
- THE STRUCTURE OF CALMODULIN’S COMPLEX WITH KAR-2: A NOVEL MODE OF BINDING EXPLAINS THE DRUG’S UNIQUE PHARMACOLOGY (2004) (0)
- Infrared spectroscopic characterization of β-turns in cyclic pseudo-hexapeptides (1993) (0)
- The Inherent Stability of Collagen (2008) (0)
- Ab initio Conformational Analysis of Protein Subunits: A Case Study of the Serine Diamide Model (2010) (0)
- Foldamers of β-peptides: conformational preference of peptides formed by rigid building blocks. The first MI-IR spectra of a triamide nanosystem (2013) (0)
- Assignment of 15N-labeled oncogenic mutant KRas-G12D(1-169) in physiological pH (2019) (0)
- s1.m6.p10 Binding of KAR-2 to a new binding domain of calmodulin and beyond: structure and function (2004) (0)
- Toward direct determination of conformations of protein building units from multidimensional NMR experiments I. A theoretical case study of For-Gly-NH2 and For-L-Ala-NH2 (2000) (0)
- A theoretical case study of type I and type II beta-turns. (2003) (0)
- Corrigendum to ‘‘Transformation of aldose formazans. Novel synthesis of 2-acetamido-2-deoxypentonolactones and a new pent-2-enose formazan” [Carbohydr. Res. 346 (2011) 1534–1540] (2011) (0)
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