Pamela J. Green | Academic Influence

Pamela J. Green's AcademicInfluence.com Rankings

Pamela J. Green

Biology

#6041

World Rank

#8664

Historical Rank

Cell Biology

#793

World Rank

#811

Historical Rank

Molecular Biology

#1346

World Rank

#1373

Historical Rank

Genetics

#1611

World Rank

#1717

Historical Rank

biology Degrees

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Biology

Pamela J. Green's Degrees

Bachelors Biology University of California, Berkeley
PhD Molecular Biology Stanford University

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Why Is Pamela J. Green Influential?

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According to Wikipedia, Pamela J. Green is Crawford H. Greenewalt Chair, Professor of Plant and Soil Sciences and Professor of Marine Studies at the University of Delaware. She has researched the uses for RNA, one of the three major biological macromolecules that are essential for all known forms of life.

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Pamela J. Green's Published Works

Number of citations in a given year to any of this author's works

Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author

Published Works

The tomato genome sequence provides insights into fleshy fruit evolution (2012) (2615)
The Chlamydomonas Genome Reveals the Evolution of Key Animal and Plant Functions (2007) (2504)
Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans (2009) (1305)
Criteria for Annotation of Plant MicroRNAs (2008) (1146)
The Medicago Genome Provides Insight into the Evolution of Rhizobial Symbioses (2011) (1131)
Global identification of microRNA–target RNA pairs by parallel analysis of RNA ends (2008) (790)
Elucidation of the Small RNA Component of the Transcriptome (2005) (650)
MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs. (2011) (610)
Dissecting Arabidopsis thaliana DICER function in small RNA processing, gene silencing and DNA methylation patterning (2006) (581)
Filtering of deep sequencing data reveals the existence of abundant Dicer-dependent small RNAs derived from tRNAs. (2009) (549)
Nitrate-responsive miR393/AFB3 regulatory module controls root system architecture in Arabidopsis thaliana (2010) (529)
tRNA cleavage is a conserved response to oxidative stress in eukaryotes. (2008) (504)
Regulation of Gene Expression in Higher Plants (1987) (409)
The role of antisense RNA in gene regulation. (1986) (393)
MicroRNAs and other small RNAs enriched in the Arabidopsis RNA-dependent RNA polymerase-2 mutant. (2006) (372)
Sequence‐specific interactions of a pea nuclear factor with light‐responsive elements upstream of the rbcS‐3A gene. (1987) (368)
AtXRN4 degrades mRNA in Arabidopsis and its substrates include selected miRNA targets. (2004) (353)
The genome of the seagrass Zostera marina reveals angiosperm adaptation to the sea (2016) (352)
The Rice Annotation Project Database (RAP-DB): 2008 update* (2007) (337)
Massive Analysis of Rice Small RNAs: Mechanistic Implications of Regulated MicroRNAs and Variants for Differential Target RNA Cleavage[W][OA] (2011) (309)
The Arabidopsis ribonuclease gene RNS1 is tightly controlled in response to phosphate limitation. (1994) (301)
Construction of Parallel Analysis of RNA Ends (PARE) libraries for the study of cleaved miRNA targets and the RNA degradome (2009) (297)
Riboswitch Control of Gene Expression in Plants by Splicing and Alternative 3′ End Processing of mRNAs[W][OA] (2007) (294)
Role of RNA polymerase IV in plant small RNA metabolism (2007) (286)
XRN 5'→3' exoribonucleases: structure, mechanisms and functions. (2013) (284)
An expression atlas of rice mRNAs and small RNAs (2007) (255)
RNS2: a senescence-associated RNase of Arabidopsis that diverged from the S-RNases before speciation. (1993) (252)
The Ribonucleases of Higher Plants (1994) (251)
Roles of DCL4 and DCL3b in rice phased small RNA biogenesis. (2012) (250)
Marek's Disease Virus Encodes MicroRNAs That Map to meq and the Latency-Associated Transcript (2006) (234)
Genome-wide analysis for discovery of rice microRNAs reveals natural antisense microRNAs (nat-miRNAs) (2008) (225)
DST sequences, highly conserved among plant SAUR genes, target reporter transcripts for rapid decay in tobacco. (1993) (224)
Binding site requirements for pea nuclear protein factor GT‐1 correlate with sequences required for light‐dependent transcriptional activation of the rbcS‐3A gene. (1988) (222)
Identification of unstable transcripts in Arabidopsis by cDNA microarray analysis: Rapid decay is associated with a group of touch- and specific clock-controlled genes (2002) (209)
Construction of small RNA cDNA libraries for deep sequencing. (2007) (208)
Distinct size distribution of endogenous siRNAs in maize: Evidence from deep sequencing in the mop1-1 mutant (2008) (194)
Induction of the Arginine Decarboxylase ADC2 Gene Provides Evidence for the Involvement of Polyamines in the Wound Response in Arabidopsis1 (2002) (190)
Control of mRNA Stability in Higher Plants (1993) (178)
Novel features of the XRN-family in Arabidopsis: evidence that AtXRN4, one of several orthologs of nuclear Xrn2p/Rat1p, functions in the cytoplasm. (2000) (177)
The use of RNAs complementary to specific mRNAs to regulate the expression of individual bacterial genes (1984) (175)
Sample sequencing of vascular plants demonstrates widespread conservation and divergence of microRNAs (2014) (174)
Identification of BFN1, a bifunctional nuclease induced during leaf and stem senescence in Arabidopsis. (2000) (162)
Regulation of S-like ribonuclease levels in Arabidopsis. Antisense inhibition of RNS1 or RNS2 elevates anthocyanin accumulation. (1999) (162)
Characterization of the Auxin-Inducible SAUR-AC1 Gene for Use as a Molecular Genetic Tool in Arabidopsis (1994) (153)
Sequences in the pea rbcS-3A gene have homology to constitutive mammalian enhancers but function as negative regulatory elements. (1987) (149)
Uridylation of mature miRNAs and siRNAs by the MUT68 nucleotidyltransferase promotes their degradation in Chlamydomonas (2010) (147)
Deep Sequencing of Chicken microRNAs (2008) (145)
Experimental RNomics Identification of 140 Candidates for Small Non-Messenger RNAs in the Plant Arabidopsis thaliana (2002) (140)
Localization and conditional redundancy of regulatory elements in rbcS-3A, a pea gene encoding the small subunit of ribulose-bisphosphate carboxylase. (1988) (134)
Sequence Conservation and Differential Expression of Marek's Disease Virus MicroRNAs (2008) (125)
Prediction of novel miRNAs and associated target genes in Glycine max (2010) (125)
The effect of sequences with high AU content on mRNA stability in tobacco. (1993) (120)
Premature nonsense codons decrease the stability of phytohemagglutinin mRNA in a position-dependent manner. (1996) (116)
Identification and analysis of Arabidopsis expressed sequence tags characteristic of non-coding RNAs. (2001) (114)
Identification and Properties of the Major Ribonucleases of Arabidopsis thaliana. (1991) (110)
Multiple regions of the Arabidopsis SAUR‐AC1 gene control transcript abundance: the 3′ untranslated region functions as an mRNA instability determinant. (1996) (105)
Circadian Control of Messenger RNA Stability. Association with a Sequence-Specific Messenger RNA Decay Pathway1[w] (2005) (105)
Distinct extremely abundant siRNAs associated with cosuppression in petunia. (2009) (98)
Genomic and small RNA sequencing of Miscanthus × giganteus shows the utility of sorghum as a reference genome sequence for Andropogoneae grasses (2010) (98)
Genomic and Genetic Characterization of Rice Cen3 Reveals Extensive Transcription and Evolutionary Implications of a Complex Centromere[W][OA] (2006) (95)
Arabidopsis thaliana XRN2 is required for primary cleavage in the pre-ribosomal RNA (2010) (95)
Direct evidence for rapid degradation of Bacillus thuringiensis toxin mRNA as a cause of poor expression in plants. (1998) (94)
A novel immune system against bacteriophage infection using complementary RNA (micRNA) (1985) (92)
Identification of SMG6 cleavage sites and a preferred RNA cleavage motif by global analysis of endogenous NMD targets in human cells (2014) (91)
RNA-mediated trans-communication can establish paramutation at the b1 locus in maize (2010) (90)
The role of rice microRNAs in abiotic stress responses (2013) (89)
Plant snoRNA database (2003) (89)
Evidence that XRN4, an Arabidopsis homolog of exoribonuclease XRN1, preferentially impacts transcripts with certain sequences or in particular functional categories. (2011) (87)
Senescence-induced RNases in tomato (1998) (86)
Behavioral plasticity in honey bees is associated with differences in brain microRNA transcriptome (2012) (84)
Local and systemic wound-induction of RNase and nuclease activities in Arabidopsis: RNS1 as a marker for a JA-independent systemic signaling pathway. (2002) (83)
Diamonds in the rough: mRNA-like non-coding RNAs. (2008) (81)
Genes with Homology to Fungal and S-Gene RNases Are Expressed in Arabidopsis thaliana. (1991) (80)
Heat-induced ribosome pausing triggers mRNA co-translational decay in Arabidopsis thaliana (2015) (78)
Characterization of Rny1, the Saccharomyces cerevisiae member of the T2 RNase family of RNases: unexpected functions for ancient enzymes? (2001) (78)
Sweating the small stuff: microRNA discovery in plants. (2006) (77)
The isolation and characterization of RNA coded by the micF gene in Escherichia coli. (1987) (75)
In vitro DNA footprinting (1989) (73)
Parallel analysis of RNA ends enhances global investigation of microRNAs and target RNAs of Brachypodium distachyon (2013) (72)
Suppression of LX Ribonuclease in Tomato Results in a Delay of Leaf Senescence and Abscission1[W] (2006) (71)
mRNA Degradation Machinery in Plants (2009) (70)
Comprehensive Investigation of MicroRNAs Enhanced by Analysis of Sequence Variants, Expression Patterns, ARGONAUTE Loading, and Target Cleavage1[W][OA] (2013) (67)
AtPARN is an essential poly(A) ribonuclease in Arabidopsis. (2004) (67)
Phylogenetic profiling of the Arabidopsis thaliana proteome: what proteins distinguish plants from other organisms? (2004) (62)
MicroRNAs of Gallid and Meleagrid herpesviruses show generally conserved genomic locations and are virus-specific. (2009) (60)
Premature polyadenylation at multiple sites within a Bacillus thuringiensis toxin gene-coding region. (1998) (60)
Mutants of Arabidopsis defective in a sequence-specific mRNA degradation pathway. (2000) (59)
New Molecular Phenotypes in the dst Mutants of Arabidopsis Revealed by DNA Microarray Analysis Article, publication date, and citation information can be found at www.plantcell.org/cgi/doi/10.1105/tpc.010295. (2001) (51)
Differential expression of miRNAs and their target genes in senescing leaves and siliques: insights from deep sequencing of small RNAs and cleaved target RNAs (2014) (51)
Post-transcriptional regulation of nuclear-encoded genes in higher plants: the roles of mRNA stability and translation (1993) (48)
Detailed Analysis of a Contiguous 22-Mb Region of the Maize Genome (2009) (47)
Impact of transcriptional, ABA-dependent, and ABA-independent pathways on wounding regulation of RNS1 expression (2008) (45)
Phytochrome activation of two nuclear genes requires cytoplasmic protein synthesis. (1989) (43)
Methods for isolation of total RNA to recover miRNAs and other small RNAs from diverse species. (2010) (42)
Mutational analysis of the DST element in tobacco cells and transgenic plants: identification of residues critical for mRNA instability. (1996) (41)
Interactions of cAMP receptor protein with the ompA gene, a gene for a major outer membrane protein of Escherichia coli (1981) (41)
Opsin Repertoire and Expression Patterns in Horseshoe Crabs: Evidence from the Genome of Limulus polyphemus (Arthropoda: Chelicerata) (2016) (40)
Regulatory activity exerted by the SAUR-AC1 promoter region in transgenic plants (1997) (37)
Problems that can limit the expression of foreign genes in plants: lessons to be learned from B.t. toxin genes. (1996) (35)
AtCCR4a and AtCCR4b are Involved in Determining the Poly(A) Length of Granule-bound starch synthase 1 Transcript and Modulating Sucrose and Starch Metabolism in Arabidopsis thaliana. (2015) (33)
Murine Oviductosomes (OVS) microRNA profiling during the estrous cycle: Delivery of OVS-borne microRNAs to sperm where miR-34c-5p localizes at the centrosome (2018) (32)
RNA degradomes reveal substrates and importance for dark and nitrogen stress responses of Arabidopsis XRN4 (2019) (29)
Interaction of cAMP receptor protein with the ompA gene, a gene for a major outer membrane protein of Escherichia coli. (1981) (28)
Roles of the 5' leader region of the ompA mRNA. (1984) (26)
Control of mRNA stability in higher plants (1996) (25)
Identification and characterization of genes with unstable transcripts (GUTs) in tobacco (1995) (24)
Methods for validation of miRNA sequence variants and the cleavage of their targets. (2012) (24)
Abiotic stress-associated miRNAs: detection and functional analysis. (2010) (24)
Cis-Acting Elements for Selective Expression of Two Photosynthetic Genes in Transgenic Plants (1986) (24)
MAJOR DEVELOPMENTAL REGULATORS AND THEIR EXPRESSION IN TWO CLOSELY RELATED SPECIES OF PORPHYRA (RHODOPHYTA) 1 (2012) (21)
A microRNA of infectious laryngotracheitis virus can downregulate and direct cleavage of ICP4 mRNA. (2011) (21)
Analysis of Brachypodium miRNA targets: evidence for diverse control during stress and conservation in bioenergy crops (2018) (19)
Comparative analysis of the plant mRNA-destabilizing element, DST, in mammalian and tobacco cells (2002) (19)
5 – Plant Ribonucleases (1997) (18)
An miRNA Expression Signature for the Human Colonic Stem Cell Niche Distinguishes Malignant from Normal Epithelia. (2017) (15)
Localization and conditional redundancy of regulatory elements in rbcS-3 A , a pea gene encoding the small subunit of ribulose-bisphosphate carboxylase ( transgenic plants / cis-acting elements / light regulation / plant development / Pisum sativum ) (12)
Rare codons are not sufficient to destabilize a reporter gene transcript in tobacco (1997) (12)
Identification of BFN 1 , a Bifunctional Nuclease Induced during Leaf and Stem Senescence in Arabidopsis 1 (2000) (10)
Analysis of XRN orthologs by complementation of yeast mutants and localization of XRN-GFP fusion proteins. (2001) (10)
AtXRN 4 Degrades mRNA in Arabidopsis and Its Substrates Include Selected miRNA Targets cay in mammals (2004) (10)
Molecular evolution of duplicate copies of genes encoding cytosolic glutamine synthetase in Pisum sativum (1995) (9)
miRNAs in the Plant Genome: All Things Great and Small. (2008) (8)
Plant MicroRNAs (2010) (7)
Plant microRNAs : methods and protocols (2009) (6)
Effect of mic gene structure on repressor activity in the OmpA system. (1985) (5)
Integrative Analysis of Gene Expression and miRNAs Reveal Biological Pathways Associated with Bud Paradormancy and Endodormancy in Grapevine (2021) (4)
Plant Cell Biology Comes of Age (1995) (4)
' s personal copy A microRNA of infectious laryngotracheitis virus can downregulate and direct cleavage of ICP 4 mRNA (2011) (4)
Genetics of the DST-mediated mRNA decay pathway using a transgene-based selection. (2004) (3)
Evolution of Compound Leaf Development in Legumes : Evidence for Overlapping Roles of KNOX 1 and FLO / LFY Genes (2007) (2)
Determinants of mRNA Stability in Higher Plants (1994) (2)
In vivo and in vitro systems for studying bacterial membrane biogenesis. (1983) (2)
Genome-Wide Analysis of miRNA targets in Brachypodium and Biomass Energy Crops (2015) (1)
interactions ofa peanuclear factor withlight- responsive elements upstream oftherbcS-3A gene (1987) (1)
Dicer-dependent small RNAs derived from tRNAs Filtering of deep sequencing data reveals the existence of abundant Material Supplemental (2009) (1)
mRNA Decay Machinery in Plants: Approaches and Potential Components (1998) (1)
Parallel analysis of RNA ends enhances global investigation of microRNAs and target RNAs of Brachypodium distachyon (2013) (1)
Final Report [Regulated mRNA Decay in Arabidopsis: A global analysis of differential control by hormones and the circadian clock] (2010) (0)
Analysis of Small RNAs Associated with Plant Senescence (2012) (0)
Cytoplasmic deadenylases AtCCR4a/4b are involved in the regulation of circadian clock gene expression in Arabidopsis. (2016) (0)
The microRNAs of Brachypodium (2015) (0)
The RNA World: Identifying miRNA‐Target RNA Pairs as Possible Missing Links in Multi‐Network Models (2009) (0)
The role of rice microRNAs in abiotic stress responses (2013) (0)
Analysis of Senescence Inducible Ribonuclease in Tomato: Gene Regulation and Function (2000) (0)
2008 Benjamin Franklin medal in life science is Presented to Victor Ambros, Ph.D. (University of Massachusetts Medical School, Worcester, Massachusetts), Gary Ruvkun, Ph.D. (Harvard Medical School, Massachusetts General Hospital, Boston, Massachusetts) and David Baulcombe, Ph.D., FRS (University of (2011) (0)
REGULATION OF PHOTOPHILIC AND PHOTOPHOBIC GENES IN TRANSGENIC PLANTS (1987) (0)
Comprar Plant MicroRNAs | Meyers, Blake C. | 9781603270045 | Springer (2009) (0)
Table of contents (1989) (0)
Scott 2 mutant-RNA-dependent RNA polymerase ArabidopsisMicroRNAs and other small RNAs enriched in the data (2006) (0)
The use of RNAs complementary to specific mRNAs to regulate the expression of individual bacterial genes. 1984. (1992) (0)
Characterization of the Auxin-lnducible SAUR-AC 7 Gene for Use as a Molecular Genetic To 01 in Arabidopsis ' (2002) (0)
Multiple positive and negative sequence elements mediate the light-induced expression of a plant gene (1987) (0)
MicroRNAs Associated with Environmental Stress in Arabidopsis (2010) (0)
LX Senescence-Induced Ribonuclease in Tomato: Function and Regulation (2003) (0)
RNA degradome analysis reveals DNE1 endoribonuclease is required for the turnover of diverse mRNA substrates in Arabidopsis. (2023) (0)
Table of Contents (1988) (0)
Analysis of Brachypodium miRNA targets: evidence for diverse control during stress and conservation in bioenergy crops (2018) (0)
Murine Oviductosomes (OVS) microRNA profiling during the estrous cycle: Delivery of OVS-borne microRNAs to sperm where miR-34c-5p localizes at the centrosome (2018) (0)
Gene expression profiling in Arabidopsis using DNA microarrays (1999) (0)
Franklin medal in life science is Presented to (2011) (0)
Parallel Analysis of RNA Ends Enhances Global Investigation of miRNAs and Target RNAs in Brachypodium (2014) (0)

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