Shoshana Wodak | Academic Influence

Shoshana Wodak's AcademicInfluence.com Rankings

Shoshana Wodak

Biology

#3146

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#4849

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Computational Biology

#77

World Rank

#77

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Bioinformatics

#123

World Rank

#125

Historical Rank

biology Degrees

Shoshana Wodak

Computer Science

#5055

World Rank

#5341

Historical Rank

Database

#2618

World Rank

#2740

Historical Rank

computer-science Degrees

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Biology
Computer Science

Shoshana Wodak's Degrees

PhD Computational Biology Stanford University
Masters Bioinformatics University of California, Berkeley
Bachelors Biology University of California, Berkeley

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Why Is Shoshana Wodak Influential?

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According to Wikipedia, Shoshana Wodak is a computational biologist and an organizational leader in the field of protein-protein docking. Wodak was one of the first people to dock proteins together using a computer program.

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Shoshana Wodak's Published Works

Number of citations in a given year to any of this author's works

Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author

Published Works

Global landscape of protein complexes in the yeast Saccharomyces cerevisiae (2006) (2968)
SFCHECK: a unified set of procedures for evaluating the quality of macromolecular structure-factor data and their agreement with the atomic model. (1999) (846)
A Census of Human Soluble Protein Complexes (2012) (754)
CAPRI: A Critical Assessment of PRedicted Interactions (2003) (618)
Deviations from standard atomic volumes as a quality measure for protein crystal structures. (1996) (592)
Up-to-date catalogues of yeast protein complexes (2008) (563)
Assessment of blind predictions of protein–protein interactions: Current status of docking methods (2003) (404)
Analysis of zinc binding sites in protein crystal structures (1998) (374)
CYGD: the Comprehensive Yeast Genome Database (2004) (347)
Assessment of CAPRI predictions in rounds 3–5 shows progress in docking procedures (2005) (343)
Docking and scoring protein complexes: CAPRI 3rd Edition (2007) (326)
Markov clustering versus affinity propagation for the partitioning of protein interaction graphs (2009) (233)
Interaction landscape of membrane-protein complexes in Saccharomyces cerevisiae (2012) (233)
Docking and scoring protein interactions: CAPRI 2009 (2010) (226)
Docking, scoring, and affinity prediction in CAPRI (2013) (224)
Modeling of the three-dimensional structure of proteins with the typical leucine-rich repeats. (1995) (222)
ACLAME: A CLAssification of Mobile genetic Elements (2004) (214)
Protein structure prediction by threading methods: Evaluation of current techniques (1995) (212)
iRefWeb: interactive analysis of consolidated protein interaction data and their supporting evidence (2010) (209)
Factors influencing the ability of knowledge-based potentials to identify native sequence-structure matches. (1994) (203)
Modelling the polypeptide backbone with 'spare parts' from known protein structures. (1989) (200)
Allostery in Its Many Disguises: From Theory to Applications. (2019) (196)
Prediction of protein backbone conformation based on seven structure assignments. Influence of local interactions. (1991) (193)
Modeling protein–protein and protein–peptide complexes: CAPRI 6th edition (2017) (180)
Structural basis of macromolecular recognition. (2002) (167)
Generating and testing protein folds (1993) (163)
Identification of predictive sequence motifs limited by protein structure data base size (1988) (155)
Prediction of protein-protein interactions: the CAPRI experiment, its evaluation and implications. (2004) (143)
NMR sequential assignments and solution structure of chlorotoxin, a small scorpion toxin that blocks chloride channels. (1995) (140)
Community-wide assessment of protein-interface modeling suggests improvements to design methodology. (2011) (139)
Automatic protein design with all atom force-fields by exact and heuristic optimization. (2000) (135)
Identifying functional modules in the physical interactome of Saccharomyces cerevisiae (2007) (134)
Inferring meaningful pathways in weighted metabolic networks. (2006) (129)
The TXP Motif in the Second Transmembrane Helix of CCR5 (2001) (129)
Contribution of the hydrophobic effect to protein stability: analysis based on simulations of the Ile-96----Ala mutation in barnase. (1991) (128)
Prediction of homoprotein and heteroprotein complexes by protein docking and template‐based modeling: A CASP‐CAPRI experiment (2016) (126)
Representing and Analysing Molecular and Cellular Function Using the Computer (2000) (123)
An overview of data models for the analysis of biochemical pathways (2003) (121)
Automatic definition of recurrent local structure motifs in proteins. (1990) (119)
Location of structural domains in proteins (1981) (119)
A Conserved Asn in Transmembrane Helix 7 Is an On/Off Switch in the Activation of the Thyrotropin Receptor* (2001) (110)
Automatic classification and analysis of alpha alpha-turn motifs in proteins. (1996) (109)
Protein engineering of xylose (glucose) isomerase from Actinoplanes missouriensis. 1. Crystallography and site-directed mutagenesis of metal binding sites. (1993) (108)
Extracting information on folding from the amino acid sequence: accurate predictions for protein regions with preferred conformation in the absence of tertiary interactions. (1992) (107)
Who checks the checkers? Four validation tools applied to eight atomic resolution structures. EU 3-D Validation Network. (1998) (107)
Calculations of electrostatic properties in proteins. Analysis of contributions from induced protein dipoles. (1987) (104)
Assessment of a method to characterize antibody selectivity and specificity for use in immunoprecipitation (2015) (104)
Metabolic PathFinding: inferring relevant pathways in biochemical networks (2005) (100)
Genetic Interaction Maps in Escherichia coli Reveal Functional Crosstalk among Cell Envelope Biogenesis Pathways (2011) (99)
Community‐wide evaluation of methods for predicting the effect of mutations on protein–protein interactions (2013) (96)
An electrostatic switch displaces phosphatidylinositol phosphate kinases from the membrane during phagocytosis (2009) (95)
Challenges and Rewards of Interaction Proteomics * (2009) (95)
Homo- and heteronuclear two-dimensional NMR studies of the globular domain of histone H1: full assignment, tertiary structure, and comparison with the globular domain of histone H5. (1994) (95)
Molecular dynamics simulation of polarizable water by an extended Lagrangian method (1992) (94)
The structure of cytidilyl(2',5')adenosine when bound to pancreatic ribonuclease S. (1977) (93)
Activation of CCR5 by Chemokines Involves an Aromatic Cluster between Transmembrane Helices 2 and 3* (2003) (92)
Blind predictions of protein interfaces by docking calculations in CAPRI (2010) (91)
Activators of cylindrical proteases as antimicrobials: identification and development of small molecule activators of ClpP protease. (2011) (90)
The aMAZE LightBench: a web interface to a relational database of cellular processes (2004) (89)
CRYBA4, a novel human cataract gene, is also involved in microphthalmia. (2006) (88)
Protein-protein interaction networks: the puzzling riches. (2013) (88)
Structural principles of parallel beta-barrels in proteins. (1988) (84)
LigASite—a database of biologically relevant binding sites in proteins with known apo-structures (2007) (83)
Mutations in chaperonin-like BBS genes are a major contributor to disease development in a multiethnic Bardet–Biedl syndrome patient population (2010) (83)
Optimal protein structure alignments by multiple linkage clustering: application to distantly related proteins. (1995) (77)
Molecular dynamics study of methane hydration and methane association in a polarizable water phase (1993) (77)
Folding free energy function selects native-like protein sequences in the core but not on the surface (2002) (76)
Literature curation of protein interactions: measuring agreement across major public databases (2010) (76)
Multilocus loss of DNA methylation in individuals with mutations in the histone H3 Lysine 4 Demethylase KDM5C (2013) (76)
The brugel package - toward computer-aided-design of macromolecules (1988) (74)
Graph-based analysis of metabolic networks. (2002) (71)
Blind prediction of homo‐ and hetero‐protein complexes: The CASP13‐CAPRI experiment (2019) (71)
Hemoglobin interaction in sickle cell fibers. I: Theoretical approaches to the molecular contacts. (1975) (69)
Energy calculations and analysis of HIV-1 protease-inhibitor crystal structures. (1994) (68)
The challenge of modeling protein assemblies: the CASP12‐CAPRI experiment (2018) (65)
Human-chromatin-related protein interactions identify a demethylase complex required for chromosome segregation. (2014) (64)
Modeling protein‐protein, protein‐peptide, and protein‐oligosaccharide complexes: CAPRI 7th edition (2019) (63)
Protein engineering of xylose (glucose) isomerase from Actinoplanes missouriensis. 3. Changing metal specificity and the pH profile by site-directed mutagenesis. (1992) (60)
Relations between protein sequence and structure and their significance. (1990) (60)
Intercellular network structure and regulatory motifs in the human hematopoietic system (2014) (60)
GenePro: a cytoscape plug-in for advanced visualization and analysis of interaction networks (2006) (60)
Savant Genome Browser 2: visualization and analysis for population-scale genomics (2012) (59)
Score_set: A CAPRI benchmark for scoring protein complexes (2014) (58)
Conserved water molecules in MHC class-I molecules and their putative structural and functional roles. (2002) (58)
Protein engineering of xylose (glucose) isomerase from Actinoplanes missouriensis. 2. Site-directed mutagenesis of the xylose binding site. (1992) (58)
Blind prediction of interfacial water positions in CAPRI (2014) (55)
The third CAPRI assessment meeting Toronto, Canada, April 20-21, 2007. (2007) (54)
Computational protein design is a challenge for implicit solvation models. (2005) (54)
Identification of structural domains in proteins by a graph heuristic (1999) (53)
Are database-derived potentials valid for scoring both forward and inverted protein folding? (1995) (53)
Interactive computer animation of macromolecules (1984) (51)
Computational approaches to investigating allostery. (2016) (50)
Properties of the protein matrix revealed by the free energy of cavity formation. (1996) (50)
Computer simulations of liquid water: treatment of long-range interactions (1990) (50)
Homo- and heteronuclear two-dimensional NMR studies of the globular domain of histone H1: sequential assignment and secondary structure. (1993) (50)
Extracting information on folding from the amino acid sequence: consensus regions with preferred conformation in homologous proteins. (1992) (49)
Transcriptional regulation of protein complexes in yeast (2004) (46)
Reaction pathway for the quaternary structure change in hemoglobin (1985) (45)
From Molecular Activities and Processes to Biological Function (2001) (43)
Sesam: A relational database for structure and sequence of macromolecules (1991) (43)
Structural analysis of the 2.8 Å model of xylose isomerase from Actinoplanes missouriensis (1988) (40)
Effect of mutations within the peripheral anionic site on the stability of acetylcholinesterase. (1999) (40)
Detection of cavities in a set of interpenetrating spheres (1991) (40)
Progressive combinatorial algorithm for multiple structural alignments: Application to distantly related proteins (2004) (40)
Protein modules and protein-protein interaction (2003) (39)
Combining pattern discovery and discriminant analysis to predict gene co-regulation (2004) (38)
Automatic Sequence Design of Major Histocompatibility Complex Class I Binding Peptides Impairing CD8+ T Cell Recognition* 210 (2003) (37)
Weak correlation between predictive power of individual sequence patterns and overall prediction accuracy in proteins (1991) (37)
Recurrent αβ loop structures in TIM barrel motifs show a distinct pattern of conserved structural features (1992) (36)
Prediction of protein assemblies, the next frontier: The CASP14‐CAPRI experiment (2021) (36)
Free Energy of Cavity Formation in Liquid Water and Hexane (1996) (36)
Automatic analysis of protein conformational changes by multiple linkage clustering. (1995) (36)
Brain abnormalities in patients with Beckwith–Wiedemann syndrome (2012) (34)
Interaction databases on the same page (2011) (34)
Protein modules and protein-protein interaction. Introduction. (2002) (34)
A benchmark testing ground for integrating homology modeling and protein docking (2017) (33)
Local coherence in genetic interaction patterns reveals prevalent functional versatility (2008) (32)
Mechanism and energy landscape of domain swapping in the B1 domain of protein G. (2008) (31)
Application of Regulatory Sequence Analysis and Metabolic Network Analysis to the Interpretation of Gene Expression Data (2000) (31)
Pathways of ligand clearance in acetylcholinesterase by multiple copy sampling. (2000) (31)
Development and parametrization of continuum solvent models. I. Models based on the boundary element method (1996) (30)
The Balancing Act of Intrinsically Disordered Proteins: Enabling Functional Diversity while Minimizing Promiscuity. (2019) (30)
Thermodynamics of cavity formation in water and n-hexane using the Widom particle insertion method (1999) (30)
Relating destabilizing regions to known functional sites in proteins (2007) (30)
Solution structure of the main α‐amylase inhibitor from amaranth seeds (2001) (28)
Automatic procedures for protein design. (2001) (28)
Identifying structural domains in proteins. (2005) (28)
De novo missense variants in RAC3 cause a novel neurodevelopmental syndrome (2018) (28)
Amino acid sequence templates derived from recurrent turn motifs in proteins: critical evaluation of their predictive power. (1989) (28)
Modularity of the transcriptional response of protein complexes in yeast. (2006) (27)
Intertwined associations in structures of homooligomeric proteins. (2013) (26)
DAnCER: Disease-Annotated Chromatin Epigenetics Resource (2010) (26)
Simulation of conformational changes in 2 Zn insulin. (1985) (26)
Topic Pages: PLoS Computational Biology Meets Wikipedia (2012) (24)
Transfer nuclear Overhauser effect study of the conformation of oxytocin bound to bovine neurophysin I. (1993) (24)
Assessment of methylation level prediction accuracy in methyl-DNA immunoprecipitation and sodium bisulfite based microarray platforms (2011) (23)
Modification of human hemoglobin by glutathione. III. Perturbations of hemoglobin conformation analyzed by computer modeling. (1986) (22)
Navigating the global protein-protein interaction landscape using iRefWeb. (2014) (21)
The evolutionary landscape of the chromatin modification machinery reveals lineage specific gains, expansions, and losses (2010) (21)
Phenotypic Switching Induced by Damaged Matrix Is Associated with DNA Methyltransferase 3A (DNMT3A) Activity and Nuclear Localization in Smooth Muscle Cells (SMC) (2013) (21)
The impact of structural bioinformatics tools and resources on SARS-CoV-2 research and therapeutic strategies (2020) (21)
Conformational properties of four peptides corresponding to alpha-helical regions of Rhodospirillum cytochrome c2 and bovine calcium binding protein. (1994) (20)
Extracting high confidence protein interactions from affinity purification data: at the crossroads. (2015) (20)
Typical interaction patterns in alphabeta and betaalpha turn motifs. (1998) (19)
Extended Lagrangian formalism applied to temperature control and electronic polarization effects in molecular dynamics simulations (1995) (18)
Interplay of buried histidine protonation and protein stability in prion misfolding (2017) (18)
Recognizing protein–protein interfaces with empirical potentials and reduced amino acid alphabets (2007) (18)
Checking nucleic acid crystal structures. (2001) (18)
T1 relaxation time of water from a molecular dynamics simulation (1993) (17)
From the Mediterranean coast to the shores of Lake Ontario: CAPRI's premiere on the American continent (2007) (16)
Unfolding simulations of the 85-102 beta-hairpin of barnase. (1995) (16)
Integration of Data from Liquid–Liquid Phase Separation Databases Highlights Concentration and Dosage Sensitivity of LLPS Drivers (2021) (16)
Insight into membraneless organelles and their associated proteins: Drivers, Clients and Regulators (2021) (15)
The Landscape of Intertwined Associations in Homooligomeric Proteins. (2015) (14)
Landscape of intertwined associations in multi-domain homo-oligomeric proteins. (2015) (14)
Macromolecular structure information and databases (1996) (13)
A structural domain of the covalent polymer globin chains of artemia. Interpretation of amino acid sequence data. (1988) (13)
Risk estimates for complex disorders: comparing personal genome testing and family history (2013) (13)
Computational proteome-wide screening predicts neurotoxic drug-protein interactome for the investigational analgesic BIA 10-2474. (2017) (13)
Structural interpretation of the amino acid sequence of a second domain from the Artemia covalent polymer globin. (1990) (12)
The crystal structure of fulvine: a pyrrolizidine alkaloid (1973) (12)
Multiple replica repulsion technique for efficient conformational sampling of biological systems. (2011) (12)
The design of idealized α/β‐barrels: Analysis of β‐sheet closure requirements (1990) (12)
The crystal structure of heliotrine: a pyrrolizidine alkaloid monoester (1975) (11)
Knowledge Based Potentials for Predicting the Three-Dimensional Conformation of Proteins (1994) (11)
Modeling protein assemblies: CAPRI 15 years hence 6th CAPRI evaluation meeting April 17‐19 Tel‐Aviv Israel (2016) (11)
Role of the amino acid sequence in domain swapping of the B1 domain of protein G (2008) (10)
Expanding the Landscape of Chromatin Modification (CM)-Related Functional Domains and Genes in Human (2010) (10)
Modeling protein assemblies: Critical Assessment of Predicted Interactions (CAPRI) 15 years hence. (2017) (10)
Modeling the three-dimensional structure of H+-ATPase of Neurospora crassa. (2002) (9)
Advanced pairwise structure alignments of proteins and analysis of conformational changes (2002) (9)
Lead Generation and Optimization Based on Protein-Ligand Complementarity (2010) (9)
A community proposal to integrate structural bioinformatics activities in ELIXIR (3D-Bioinfo Community) (2020) (9)
Recurrent alpha beta loop structures in TIM barrel motifs show a distinct pattern of conserved structural features. (1992) (8)
Distance-based metrics for comparing conformational ensembles of intrinsically disordered proteins (2020) (8)
Interplay of self-association and conformational flexibility in regulating protein function (2018) (7)
Submit a Topic Page to PLOS Computational Biology and Wikipedia (2018) (7)
Solution structure of the main alpha-amylase inhibitor from amaranth seeds. (2001) (7)
ACLAME : A CLAssi ® cation of Mobile genetic Elements (7)
Protein design: a computer-based approach (1999) (7)
Extending molecular systematics to the third dimension (1996) (7)
OrthoNets: simultaneous visual analysis of orthologs and their interaction neighborhoods across different organisms (2011) (7)
Computer‐Aided Design in Protein Engineering (1987) (7)
Assessing Structural Predictions of Protein-Protein Recognition: The CAPRI Experiment (2015) (7)
High-throughput analyses and curation of protein interactions in yeast. (2011) (6)
Effect of nucleotide substrate binding on the pKa of catalytic residues in barnase (1996) (6)
Basic design features of the parallel alpha beta barrel, a ubiquitous protein-folding motif. (1990) (6)
Shift in nucleotide conformational equilibrium contributes to increased rate of catalysis of GpAp versus GpA in barnase (2004) (6)
Conformational analysis of GpA and GpAp in aqueous solution by molecular dynamics and statistical methods. (1998) (5)
Faculty Opinions recommendation of A highly conserved cryptic epitope in the receptor binding domains of SARS-CoV-2 and SARS-CoV. (2020) (5)
Identification of metabolic modules from gene expression (2003) (5)
The design of idealized alpha/beta-barrels: analysis of beta-sheet closure requirements. (1990) (4)
The Structure of Artemia Hemoglobin and Hemoglobin Domains (1989) (4)
Faculty Opinions recommendation of Comparative Flavivirus-Host Protein Interaction Mapping Reveals Mechanisms of Dengue and Zika Virus Pathogenesis. (2019) (4)
Modeling protein interactions and complexes in CAPRI: Seventh CAPRI evaluation meeting, April 3‐5 EMBL‐EBI, Hinxton, UK (2020) (4)
Systems Analysis of Chromatin-Related Protein Complexes in Cancer (2014) (4)
Hemoglobin Interaction in Sickle Cell Fibers (4)
Identification of short turn motifs in proteins using sequence and structure fingerprints (1994) (3)
Coordination of structural bioinformatics activities across Europe (2018) (3)
Simulation analysis of the stability mutants R96H of bacteriophage T4 lysozyme and I96A of barnase. (1991) (3)
Integrative bioinformatics: making sense of the networks. (2004) (3)
Electrostatic properties of solvated proteins: A microscopic analysis based on computer simulations (1989) (3)
Concentration and dosage sensitivity of proteins driving liquid-liquid phase separation (2021) (2)
Assessing the quality of macromolecular structures (2006) (2)
MOLECULAR MODELING OF THE PROPOSED ACTIVE-SITE REGION OF THE TRICHODERMA-REESEI CELLOBIOHYDROLASE-I (1987) (2)
The extracellular hemoglobins of artemia: Structure of the oxygen carrier and respiration physiology (2018) (2)
Macromolecular structure information and databases. The EU BRIDGE Database Project Consortium. (1996) (2)
Objective sequence-based subfamily classifications of mouse homeodomains reflect their in vitro DNA-binding preferences (2010) (2)
Atomic volumes in protein crystallographic structures and their use in structure validation (1997) (1)
Influence of ligand binding on the conformation of Torpedo californica acetylcholinesterase (2001) (1)
Contribution of the hydrophobic effect to protein stability : molecular dynamics simulations of the lie → Ala mutation in Barnase (1991) (1)
Logical Tools for Quering and Assisting Annotation of a Biochemical Pathway Database (1999) (1)
Correction: Phenotypic Switching Induced by Damaged Matrix Is Associated with DNA Methyltransferase 3A (DNMT3A) Activity and Nuclear Localization in Smooth Muscle Cells (SMC) (2013) (1)
Predictions of Protein-Protein Interactions at the Atomic Scale (2007) (1)
PLOS Computational Biology 2017 Reviewer and Editorial Board Thank You (2018) (1)
Protein Structure and Stability: Database‐derived Potentials and Prediction (2002) (1)
Navigating the Global Protein-Protein Interaction Landscape Using iRefWeb. (2020) (1)
The Structure of Nucleic Acid-Protein Complexes as Evidenced by Dinucleotide Complexes with RNase-S (1977) (1)
Faculty Opinions recommendation of Protein structure determination using metagenome sequence data. (2017) (1)
Next-generation protein engineering targets influenza (2012) (1)
Analysis of the Stability Mutant Ile96Ala in Barnase, Based on Free Energy Simulations (1991) (1)
Molecular Dynamics and Free Energy Calculations Applied to the Enzyme Barnase and One of its Stability Mutants (2007) (1)
Editorial overview: Multi-protein assemblies in signaling. (2016) (1)
PESCADOR: The PEptides in Solution ConformAtion Database: Online Resource (2002) (1)
Proceedings of the Third International Conference on Intelligent Systems for Molecular Biology, Cambridge, United Kingdom, July 16-19, 1995 (1995) (1)
The influence of induced water dipoles on computed properties of liquid water and on hydration and association of non polar solutes (1994) (1)
ISMB-95 -- Third international conference on intelligent systems for molecular biology: Proceedings (1995) (1)
Cover Image, Volume 88, Issue 8 (2020) (1)
Coupling of the guanosine glycosidic bond conformation and the ribonucleotide cleavage reaction: Implications for barnase catalysis (2007) (1)
Chromatin Biology and Cancer Linked Through Protein–Protein Interactions (2014) (0)
Use of new software tools and knowledge based approaches in modeling protein conformation (1990) (0)
Analysis of Genetic Interaction Maps Reveals Functional Pleiotropy (2008) (0)
Simulations of protein unfolding: Insights into the hydration process (1999) (0)
Faculty Opinions recommendation of Designer protein assemblies with tunable phase diagrams in living cells. (2020) (0)
Faculty of 1000 evaluation for Method to generate highly stable D-amino acid analogs of bioactive helical peptides using a mirror image of the entire PDB. (2018) (0)
Critical Assessment of Methods for Predicting the 3D Structure of Proteins and Protein Complexes. (2022) (0)
H-NMR studies of protein fragments in solution (1993) (0)
Origins of mutation induced stability changes in barnase: an analysis based on free energy calculations (1994) (0)
Representing and Analyzing Biochemical Networks Using BioMaze (2007) (0)
Molecular Systematics in Three Dimensions (1997) (0)
174 Self-association prompts proteins for new function: The role of altered dynamic properties (2013) (0)
Effective potentials derived from known protein structures and their use in predicting 3D structure from sequence (1995) (0)
Structure of the globular domain of histone H1 determined by nuclear magnetic resonance (1994) (0)
Packing and distribution of empty space in liquids, proteins and protein-DNA complexes (2001) (0)
Influence of Induced Water Dipoles of Computer Porperties of Liquid Water and on Hydration and Association of Nonpolar Solutes. (2010) (0)
Faculty Opinions recommendation of Protein crystallization promotes type 2 immunity and is reversible by antibody treatment. (2019) (0)
Faculty Opinions recommendation of Exploring the structural origins of cryptic sites on proteins. (2018) (0)
Is It Possible to Deduce the Interaction Between Two Proteins from Their Three-Dimensional Structure? (1981) (0)
State of the art in protein engineering and its application to enzymes and proteins in industry and agriculture (1988) (0)
An Object-Oriented Data Model for Signal Transduction (2003) (0)
Faculty Opinions recommendation of RNA buffers the phase separation behavior of prion-like RNA binding proteins. (2018) (0)
Design methodology for a bioinformatic application : the case of aMAZE (2003) (0)
Structure determination of natural and recombinant globular domain of histone H1 by high frequency NMR (1992) (0)
Computer aided design of macromolecules and A.I. approaches (1986) (0)
BioEdge: a tool box for advanced analyses of biochemical networks (2007) (0)
25 Representing and Analyzing Biochemical Networks Using BioMaze (0)
Solution structure of the amaranth a-amylase inhibitor and comparison with its structure in the inhibitor-a-amylase complex (2000) (0)
Faculty Opinions recommendation of Revealing enzyme functional architecture via high-throughput microfluidic enzyme kinetics. (2021) (0)
Interplay of buried histidine protonation and protein stability in prion misfolding (2017) (0)
Role of the amino acid sequences in domain swapping of the B1 domain of protein G by computation analysis (2007) (0)
Faculty Opinions recommendation of Pi-Pi contacts are an overlooked protein feature relevant to phase separation. (2019) (0)
De novo missense variants in RAC3 cause a novel neurodevelopmental syndrome (2018) (0)
Finding metabolic paths between pairs of interacting proteins (2003) (0)
Development and parametrization of a continuum solvent model based on the boundary element method (2008) (0)
Supplementary material from "Interplay of self-association and conformational flexibility in regulating protein function" (2018) (0)
Prediction of regions with well defined conformational preferences in proteins, and their relevance to protein folding (1993) (0)
Faculty Opinions recommendation of Extracting insight from noisy cellular networks. (2018) (0)
Antonov, A.V., Tetko, I.V., Kosykh, D., Surmeli, D., Mewes, H.-W.: Exploiting scale-free information from expression data for cancer classification. Comput. Biol. Chem. 29, 288-293 (2005) (2006) (0)
Critical assessment of predicted interactions at atomic resolution (2007) (0)
Review for "Assessing the binding properties of CASP14 targets and models" (2021) (0)
Procedures for Assessing the Quality of X–Ray Structures of Macromolecules (1998) (0)
Author's response to reviews Title: Multilocus loss of DNA methylation in individuals with mutations in the histone H3 Lysine 4 Demethylase KDM5C Authors: (2012) (0)
Binding sites in protein structures: characterisation and relation with destabilising regions (2007) (0)
Chapter 21.2 Assessing the quality of macromolecular structures (2012) (0)
Computer Graphics as an Aid in Protein Structure-Function Analysis and Design (1987) (0)
Technical Approaches: Group Report (1986) (0)
Faculty of 1000 evaluation for Phase separation of a yeast prion protein promotes cellular fitness. (2018) (0)
Faculty Opinions recommendation of Multiscale interactome analysis coupled with off-target drug predictions reveals drug repurposing candidates for human coronavirus disease. (2021) (0)
Multilocus loss of DNA methylation in individuals with mutations in the histone H3 Lysine 4 Demethylase KDM5C (2013) (0)
Faculty Opinions recommendation of Towards a structurally resolved human protein interaction network. (2021) (0)
Faculty Opinions recommendation of Genomic discovery of an evolutionarily programmed modality for small-molecule targeting of an intractable protein surface. (2020) (0)
Review for "Assessment of domain interactions in CASP14" (2021) (0)
Quantitative Analysis of Proteome Localisation and Dynamics (2009) (0)

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