Akira Nakamura
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Computer Science
Akira Nakamura's Degrees
- PhD Computer Science University of Tokyo
- Masters Computer Science University of Tokyo
- Bachelors Computer Science University of Tokyo
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(Suggest an Edit or Addition)Akira Nakamura's Published Works
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Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- Maternal Pumilio acts together with Nanos in germline development in Drosophila embryos (1999) (533)
- Staufen- and FMRP-Containing Neuronal RNPs Are Structurally and Functionally Related to Somatic P Bodies (2006) (381)
- Drosophila cup is an eIF4E binding protein that associates with Bruno and regulates oskar mRNA translation in oogenesis. (2004) (364)
- Me31B silences translation of oocyte-localizing RNAs through the formation of cytoplasmic RNP complex during Drosophila oogenesis. (2001) (319)
- vasa is required for GURKEN accumulation in the oocyte, and is involved in oocyte differentiation and germline cyst development. (1998) (309)
- Requirement for a Noncoding RNA in Drosophila Polar Granules for Germ Cell Establishment (1996) (192)
- Drosophila Pgc protein inhibits P-TEFb recruitment to chromatin in primordial germ cells (2008) (192)
- The endocytic pathway acts downstream of Oskar in Drosophila germ plasm assembly (2008) (165)
- VASA mediates translation through interaction with a Drosophila yIF2 homolog. (2000) (164)
- A conserved RNA-protein complex component involved in physiological germline apoptosis regulation in C. elegans (2005) (153)
- The Nutrient-Responsive Hormone CCHamide-2 Controls Growth by Regulating Insulin-like Peptides in the Brain of Drosophila melanogaster (2015) (149)
- Molecular cloning and expression of the novel fungal beta-glucosidase genes from Humicola grisea and Trichoderma reesei. (1999) (133)
- Ammonia Fermentation, a Novel Anoxic Metabolism of Nitrate by Fungi* (2002) (127)
- Less is more: specification of the germline by transcriptional repression (2008) (115)
- A Role for the Drosophila Fragile X-Related Gene in Circadian Output (2002) (113)
- Three histidine residues in the active center of cyclodextrin glucanotransferase from alkalophilic Bacillus sp. 1011: effects of the replacement on pH dependence and transition-state stabilization. (1993) (101)
- Dynamic redistribution of vasa homolog and exclusion of somatic cell determinants during germ cell specification in Ciona intestinalis (2006) (97)
- Presence of mitochondria-type ribosomes outside mitochondria in germ plasm of Drosophila embryos (2001) (95)
- Cloning and characterization of a Bacillus subtilis gene homologous to E. coli secY. (1990) (89)
- Identification of a transcriptional regulatory region for germline-specific expression of vasa gene in Drosophila melanogaster (2002) (87)
- Four aromatic residues in the active center of cyclodextrin glucanotransferase from alkalophilic Bacillus sp. 1011: effects of replacements on substrate binding and cyclization characteristics. (1994) (81)
- Cloning, sequencing, and expression of thermophilic Bacillus sp. strain TB-90 urease gene complex in Escherichia coli (1994) (77)
- VASA localization requires the SPRY-domain and SOCS-box containing protein, GUSTAVUS. (2002) (77)
- Cloning and sequencing of the major intracellular serine protease gene of Bacillus subtilis (1986) (76)
- Fungal Ammonia Fermentation, a Novel Metabolic Mechanism That Couples the Dissimilatory and Assimilatory Pathways of Both Nitrate and Ethanol (2004) (74)
- Overproduction of recombinant Trichoderma reesei cellulases by Aspergillus oryzae and their enzymatic properties. (1998) (70)
- Analysis of Cre1 binding sites in the Trichoderma reesei cbh1 upstream region. (1996) (69)
- Pseudomonas azotifigens sp. nov., a novel nitrogen-fixing bacterium isolated from a compost pile. (2005) (68)
- Ci-Pem-1 localizes to the nucleus and represses somatic gene transcription in the germline of Ciona intestinalis embryos (2011) (61)
- In vivo directed evolution for thermostabilization of Escherichia coli hygromycin B phosphotransferase and the use of the gene as a selection marker in the host-vector system of Thermus thermophilus. (2005) (60)
- Germ cell-autonomous Wunen2 is required for germline development in Drosophila embryos (2004) (60)
- Cloning and sequencing of an alpha-glucosidase gene from Aspergillus niger and its expression in A. nidulans. (1997) (57)
- Kinetic analysis of hydroxylation of saturated fatty acids by recombinant P450foxy produced by an Escherichia coli expression system. (2002) (56)
- Tuberibacillus calidus gen. nov., sp. nov., isolated from a compost pile and reclassification of Bacillus naganoensis Tomimura et al. 1990 as Pullulanibacillus naganoensis gen. nov., comb. nov. and Bacillus laevolacticus Andersch et al. 1994 as Sporolactobacillus laevolacticus comb. nov. (2006) (56)
- Roles of Drosophila Deltex in Notch receptor endocytic trafficking and activation (2011) (55)
- Small cytoplasmic RNA of Bacillus subtilis: functional relationship with human signal recognition particle 7S RNA and Escherichia coli 4.5S RNA (1992) (53)
- Functional relationships between cyclodextrin glucanotransferase from an alkalophilic Bacillus and α‐amylases Site‐directed mutagenesis of the conserved two Asp and one Glu residues (1992) (53)
- Planifilum fimeticola gen. nov., sp. nov. and Planifilum fulgidum sp. nov., novel members of the family 'Thermoactinomycetaceae' isolated from compost. (2005) (53)
- Replacement of an amino acid residue of cyclodextrin glucanotransferase of Bacillus ohbensis doubles the production of gamma-cyclodextrin. (1994) (52)
- Mitochondrial small ribosomal RNA is present on polar granules in early cleavage embryos of Drosophila melanogaster (1999) (50)
- Drosophila Mon2 couples Oskar-induced endocytosis with actin remodeling for cortical anchorage of the germ plasm (2011) (50)
- Nucleotide sequence of a cellulase gene of Bacillus subtilis. (1987) (49)
- Cloning, sequencing, and expression of the cellulase genes of Humicola grisea var. thermoidea. (1996) (45)
- X-ray structure of cyclodextrin glucanotransferase from alkalophilic Bacillus sp. 1011. Comparison of two independent molecules at 1.8 A resolution. (1996) (44)
- Correlation between cellulose binding and activity of cellulose‐binding domain mutants of Humicola grisea cellobiohydrolase 1 (2007) (43)
- Comparison of gene structures and enzymatic properties between two endoglucanases from Humicola grisea. (1999) (39)
- Involvement of CarA/LitR and CRP/FNR Family Transcriptional Regulators in Light-Induced Carotenoid Production in Thermus thermophilus (2011) (39)
- Overlapping functions of Krüppel-like factor family members: targeting multiple transcription factors to maintain the naïve pluripotency of mouse embryonic stem cells (2018) (37)
- An l-glucose Catabolic Pathway in Paracoccus Species 43P* (2012) (36)
- Enhancement of a sigma(B)-dependent stress response in Bacillus subtilis by light via YtvA photoreceptor. (2007) (36)
- Denitrification of Nitrate by the Fungus Cylindrocarpon tonkinense (2003) (35)
- Isolation of the creA gene from the cellulolytic fungus Humicola grisea and analysis of CreA binding sites upstream from the cellulase genes. (1998) (35)
- Cloning of a gene encoding a putative carbon catabolite repressor from Trichoderma reesei. (1996) (34)
- Purification and Characterization of Cellulases from Humicola grisea (1996) (33)
- Construction and characterization of the chimeric enzymes between the Bacillus subtilis cellulase and an alkalophilic Bacillus cellulase. (1991) (33)
- Region-Specific Activation of oskar mRNA Translation by Inhibition of Bruno-Mediated Repression (2015) (33)
- Functions of the COOH-terminal region of cyclodextrin glucanotransferase of alkalophilic Bacillus sp. #1011: relation to catalyzing activity and pH stability. (1989) (32)
- The conserved P body component HPat/Pat1 negatively regulates synaptic terminal growth at the larval Drosophila neuromuscular junction (2012) (31)
- Characterization of a novel inhibitory feedback of the anti‐anti‐sigma SpoIIAA on Spo0A activation during development in Bacillus subtilis (2003) (29)
- Repression of early zygotic transcription in the germline. (2010) (29)
- Molecular Cloning of a Cellulase Gene from Bacillus subtilis and Its Expression in Escherichia coli (1986) (28)
- The evolutionally-conserved function of group B1 Sox family members confers the unique role of Sox2 in mouse ES cells (2016) (28)
- Anaerobic Elemental Sulfur Reduction by Fungus Fusarium oxysporum (2007) (28)
- Cloning and sequencing of a cyclodextrin glucanotransferase gene from Bacillus ohbensis and its expression in Escherichia coli (1991) (27)
- Cloning of a new cryIA(a) gene from Bacillus thuringiensis strain FU-2-7 and analysis of chimaeric CryIA(a) proteins for toxicity. (1994) (26)
- Gene cloning and characterization of a novel extracellular ribonuclease of Bacillus subtilis. (1992) (25)
- Transfer of an insecticidal protein gene ofBacillus thuringiensis into plant-colonizingAzospirillum (1995) (23)
- Isolation of the gene and characterization of the enzymatic properties of a major exoglucanase of humicola grisea without a cellulose-binding domain. (1998) (23)
- The sugar-responsive enteroendocrine neuropeptide F regulates lipid metabolism through glucagon-like and insulin-like hormones in Drosophila melanogaster (2021) (23)
- Roles of cytoplasmic RNP granules in intracellular RNA localization and translational control in the Drosophila oocyte (2012) (21)
- Mislocalization of oskar product in the anterior pole results in ectopic localization of mitochondrial large ribosomal RNA in Drosophila embryos. (1995) (19)
- Unusual Transcription Regulation of the niaD Gene under Anaerobic Conditions Supporting Fungal Ammonia Fermentation (2004) (19)
- Membrane Protein Location-Dependent Regulation by PI3K (III) and Rabenosyn-5 in Drosophila Wing Cells (2009) (19)
- Oskar-induced endocytic activation and actin remodeling for anchorage of the Drosophila germ plasm (2011) (19)
- Cloning, sequencing, and expression of a thermostable cellulase gene of Humicola grisea. (1997) (19)
- Nucleotide sequence of the cryptic plasmid pTT8 from Thermus thermophilus HB8 and isolation and characterization of its high-copy-number mutant. (2004) (18)
- Paracoccus laeviglucosivorans sp. nov., an l-glucose-utilizing bacterium isolated from soil. (2015) (17)
- Functional analysis of the small subunit of the putative homoaconitase from Pyrococcus horikoshii in the Thermus lysine biosynthetic pathway. (2004) (16)
- Rapid and efficient generation of GFP‐knocked‐in Drosophila by the CRISPR‐Cas9‐mediated genome editing (2019) (14)
- Extracellular Production of Bacillus ohbensis Cyclodextrin Glucanotransferase by B. subtilis. (1993) (14)
- Formate-forming Fungal Catabolic Pathway to Supply Electrons to Nitrate Respiration (2003) (14)
- Isolation of a low-molecular-weight, multicopy plasmid, pNHK101, from Thermus sp. TK10 and its use as an expression vector for T. thermophilus HB27. (2005) (14)
- Regulation of cyclodextrin glucanotransferase synthesis in Bacillus ohbensis. (1997) (13)
- Characterization of three putative Lon proteases of Thermus thermophilus HB27 and use of their defective mutants as hosts for production of heterologous proteins (2008) (13)
- Map7/7D1 and Dvl form a feedback loop that facilitates microtubule remodeling and Wnt5a signaling (2018) (12)
- Structural basis of L-glucose oxidation by scyllo-inositol dehydrogenase: Implications for a novel enzyme subfamily classification (2018) (12)
- Crystal structures of the ternary complex of APH(4)-Ia/Hph with hygromycin B and an ATP analog using a thermostable mutant. (2013) (12)
- A Possible Role of NADPH-Dependent Cytochrome P450nor Isozyme in Glycolysis under Denitrifying Conditions (2003) (11)
- Dmaf, a novel member of Maf transcription factor family is expressed in somatic gonadal cells during embryonic development and gametogenesis in Drosophila. (2003) (11)
- Purification, biochemical characterization, and genetic cloning of the phytase produced by Burkholderia sp. strain a13. (2015) (11)
- MLE activates transcription via the minimal transactivation domain in Drosophila. (2008) (11)
- Correction: The Nutrient-Responsive Hormone CCHamide-2 Controls Growth by Regulating Insulin-like Peptides in the Brain of Drosophila melanogaster (2015) (11)
- Efficient Endocytic Uptake and Maturation in Drosophila Oocytes Requires Dynamitin/p50 (2015) (11)
- Brevibacillus fulvus sp. nov., isolated from a compost pile. (2014) (10)
- Isolation of Flavohemoglobin from the Actinomycete Streptomyces antibioticus Grown without External Nitric Oxide Stress (2004) (10)
- Maternal Nanos inhibits Importin-α2/Pendulin-dependent nuclear import to prevent somatic gene expression in the Drosophila germline (2019) (10)
- Directed Evolution for Thermostabilization of a Hygromycin B Phosphotransferase from Streptomyces hygroscopicus (2013) (10)
- Enzymatic Analysis of a Thermostabilized Mutant of an Escherichia coli Hygromycin B Phosphotransferase (2008) (10)
- Characterization of LgnR, an IclR family transcriptional regulator involved in the regulation of L-gluconate catabolic genes in Paracoccus sp. 43P. (2014) (9)
- Overproduction of alpha-glucosidase in Aspergillus niger transformed with the cloned gene aglA. (1998) (9)
- Coordinated repression of pro-differentiation genes via P-bodies and transcription maintains Drosophila intestinal stem cell identity (2021) (9)
- Spatial expression of Drosophila Glutathione S‐transferase‐D1 in the alimentary canal is regulated by the overlying visceral mesoderm (1999) (9)
- An integrated approach to unravel a crucial structural property required for the function of the insect steroidogenic Halloween protein Noppera-bo (2020) (9)
- Identification of the cellulose-binding domain of a Bacillus subtilis endoglucanase distinct from its catalytic domain. (1993) (9)
- Crystallization and preliminary X-ray studies of cyclodextrin glucanotransferase from alkalophilic Bacillus sp. 1011. (1994) (8)
- VASA Mediates Translation through Interaction with a Drosophila yIF 2 Homolog 1996 (2000) (8)
- Human oncoprotein 5MP suppresses general and repeat-associated non-AUG translation via eIF3 by a common mechanism. (2021) (8)
- Use of a triple protease-deficient mutant of Bacillus subtilis as a host for secretion of a B. subtilis cellulase and TEM beta-lactamase. (1991) (7)
- Achromobacter denitrificans Strain YD35 Pyruvate Dehydrogenase Controls NADH Production To Allow Tolerance to Extremely High Nitrite Levels (2014) (7)
- Conserved residues and secondary structure found in small cytoplasmic RNAs from thirteen Bacillus species. (1992) (6)
- Isolation and characterization of the nuclease O gene (nucO) from Aspergillus oryzae (1996) (6)
- Pgc suppresses the zygotically acting RNA decay pathway to protect germ plasm RNAs in the Drosophila embryo (2019) (6)
- Isolation and characterization of the actin gene from the cellulolytic fungus Humicola grisea and analysis of transcription levels of actin and cellulase genes. (1999) (6)
- Cloning of a gene encoding a putative xylanase with a cellulose-binding domain from Humicola grisea. (1997) (6)
- Use of a Thermus thermophilus host-vector system for expression of genes from the hyperthermophilic archaeon Pyrococcus horikoshii (2004) (6)
- Intracellular RNA sorting , transport and localization (2005) (5)
- RNP components condense into repressive RNP granules in the aging brain (2022) (5)
- Tyramine induces dynamic RNP granule remodeling and translation activation in the Drosophila brain (2021) (5)
- Two-Component Flavin-Dependent Riboflavin Monooxygenase Degrades Riboflavin in Devosia riboflavina (2018) (5)
- Construction and characterization of multicopy expression-vectors in Streptomyces spp (1987) (5)
- Construction of a Bacillus subtilis strain deficient in three proteases. (1990) (5)
- Endophilin B is required for the Drosophila oocyte to endocytose yolk downstream of Oskar (2014) (4)
- Identification of a VapBC toxin–antitoxin system in a thermophilic bacterium Thermus thermophilus HB27 (2016) (4)
- Transcriptional regulation of the Bacillus ohbensis cyclodextrin glucanotransferase gene in B. subtilis. (1999) (3)
- Nitrite formation from organic nitrogen by Streptomyces antibioticus supporting bacterial cell growth and possible involvement of nitric oxide as an intermediate (2014) (3)
- The polyol pathway is an evolutionarily conserved system for sensing glucose uptake (2021) (3)
- Crystallization and preliminary crystallographic analysis of hygromycin B phosphotransferase from Escherichia coli. (2007) (3)
- The PRDM14–CtBP1/2–PRC2 complex regulates transcriptional repression during the transition from primed to naïve pluripotency (2020) (3)
- A Factor Produced by Kaistia sp. 32K Accelerated the Motility of Methylobacterium sp. ME121 (2020) (3)
- Summary Germ cell-autonomous Wunen 2 is required for germline development in Drosophila embryos (3)
- Coordinate transcriptional and post-transcriptional repression of pro-differentiation genes maintains intestinal stem cell identity (2020) (2)
- PRDM14-CtBP1/2-PRC2 complex regulates transcriptional repression during transition from primed to naïve pluripotency. (2020) (2)
- Poly(A) Binding Protein Is Required for Nuclear Localization of the Ecdysteroidogenic Transcription Factor Molting Defective in the Prothoracic Gland of Drosophila melanogaster (2020) (2)
- Receptor-mediated yolk uptake is required for oskar mRNA localization and cortical anchorage of germ plasm components in the Drosophila oocyte (2021) (2)
- An integrated approach unravels a crucial structural property for the function of the insect steroidogenic Halloween protein Noppera-bo (2019) (2)
- [Mechanisms underlying maternal RNA translation and localization during Drosophila oogenesis]. (2009) (2)
- Intestinal progenitor P-bodies maintain stem cell identity by suppressing pro-differentiation factors (2020) (2)
- Draft Genome Sequence of Methylobacterium sp. ME121, Isolated from Soil as a Mixed Single Colony with Kaistia sp. 32K (2015) (2)
- Enhanced expression of cryIA(a) gene of Bacillus thuringiensis in Escherichia coli (1996) (2)
- Corrigendum to “Comparison of gene structures and enzymatic properties between two endoglucanases from Humicola grisea” (1999) (1)
- Single amino acid mutation altered substrate specificity for L-glucose and inositol in scyllo-inositol dehydrogenase isolated from Paracoccus laeviglucosivorans. (2019) (1)
- Single amino acid mutation altered substrate specificity for L-glucose and inositol in scyllo-inositol dehydrogenase isolated from Paracoccus laeviglucosivorans (2019) (1)
- Correction: Tyramine induces dynamic RNP granule remodeling and translation activation in the Drosophila brain (2021) (1)
- Metabolites Produced by Kaistia sp. 32K Promote Biofilm Formation in Coculture with Methylobacterium sp. ME121 (2020) (1)
- Cloning, Sequencing, andExpression ofThermophilic Bacillus sp.Strain TB-90Urease GeneComplex inEscherichia coli (1994) (1)
- Identification of a VapBC toxin–antitoxin system in a thermophilic bacterium Thermus thermophilus HB27 (2016) (1)
- Crystal structure of scyllo-inositol dehydrogenase with L-glucose dehydrogenase activity complexed with scyllo-inosose (2018) (0)
- Composition and location of cryIA genes in Bacillus thuringiensis strain FU-2-7. (1996) (0)
- Studies on the relationships between structure and function of cyclodextrin glucanotransferase from alkalophilic Bacillus sp. #1011 (2010) (0)
- Short Communication COMPOSITION AND LOCATION OF crylA GENES IN BACILLUS THURINGIENSIS STRAIN FU-2-7 (2006) (0)
- Cloning of a New ci : ) 7 L 4 ( a ) Gene from BacilZtis thuringiensis Strain FU-2-7 and Analysis of Chimaeric CrylA ( a ) Proteins (2018) (0)
- Construction of aBacillus subtilisStrain Deficient in Three Proteases (1990) (0)
- Crystal structure of scyllo-inositol dehydrogenase with L-glucose dehydrogenase activity (2018) (0)
- A functionally uncharacterized type-2 malate/l-lactate dehydrogenase family protein from Thermus thermophilus HB8 catalyzes stereospecific reduction of 2-keto-3-deoxy-d-gluconate (2022) (0)
- Crystal structure of aminoglycoside phosphotransferase APH(4)-Ia, ternary complex with AMP-PNP and hygromycin B (2013) (0)
- Crystal structure of scyllo-inositol dehydrogenase R178A mutant, complexed with NADH and L-glucono-1,5-lactone, from Paracoccus laeviglucosivorans (2019) (0)
- Coordination of cytoskeletal remodeling and Dishevelled localization in Wnt/PCP signaling by conserved microtubule-associated proteins (2017) (0)
- Mass spectrometry analysis of affinity-purified cytoplasmic translation initiation complexes from human and fly cells (2022) (0)
- Crystal structure of the thermostable mutant of hygromycin phosphotransferase fromEscherichia coli (2008) (0)
- Crystal structure of aminoglycoside 7""-phoshotransferase-Ia (APH(7"")-Ia/HYG) from Streptomyces hygroscopicus complexed with hygromycin B (2019) (0)
- NoteIsolation and Characterization of Humicola grisea and Analysis of Ce } } ulase Genes the Actin Gene from the Cellulolytic Transcription Levels of Actin and JSMA Fungus (2018) (0)
- Crystal structure of scyllo-inositol dehydrogenase with L-glucose dehydrogenase activity complexed with L-glucono-1,5-lactone (2018) (0)
- [Roles of vesicle trafficking in Drosophila germ plasm assembly]. (2009) (0)
- Structural studies on replication initiator protein RepE of F plasmid (2007) (0)
- Crystal structure of a thermostable mutant of aminoglycoside phosphotransferase APH(4)-Ia (N202A), ternary complex with AMP-PNP and hygromycin B (2013) (0)
- Identification of novel microtubule-associated proteins that contribute to the regulation of the Wnt/PCP signaling pathway. (2016) (0)
- A NOVEL MATERNAL-EFFECT MUTATION AFFECTING POLE CELL MAINTENANCE IN DROSOPHILA EMBRYOS.(Developmental Biology)(Proceeding of the Seventy-Third Annual Meeting of the Zoological Society of Japan) (2001) (0)
- The evolutionally-conserved function of group B1 Sox family members confers the unique role of Sox2 in mouse ES cells (2016) (0)
- PRDM14 repressive complexes regulate chromatin dynamics through partner switching (2016) (0)
- J. Gen. Appl. Microbiol., 44, 177–181 (1998) (2005) (0)
- Crystal structure of a thermostable mutant of aminoglycoside phosphotransferase APH(4)-Ia, apo form (2013) (0)
- Identification and functional analysis of PRDM14 complex in embryonic stem cells and primordial germ cells (2015) (0)
- The polyol pathway is a crucial glucose sensor in Drosophila (2020) (0)
- Germ-Cell Formation in Solitary Ascidians: Coexistence of Preformation and Epigenesis (2018) (0)
- Nutritional starvation stress in various morphological strains of Trichosporon asahii (2020) (0)
- Mechanistic Studies of CGTase using Protein Engineering Techniques. (1995) (0)
- Complete Genome Sequence of Kaistia sp. Strain 32K, Isolated from Soil as a Mixed Single Colony with Methylobacterium sp. Strain ME121 (2021) (0)
- Detecting Stress Granules in Drosophila Neurons. (2022) (0)
- Structural basis for the substrate recognition of aminoglycoside 7''-phosphotransferase-Ia from Streptomyces hygroscopicus. (2019) (0)
- Crystal structure of scyllo-inositol dehydrogenase R178A mutant, apo-form, from Paracoccus laeviglucosivorans (2019) (0)
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