Alexander L. Greninger
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Alexander L. Greninger's Degrees
- PhD Microbiology University of Washington
- Doctorate Medicine University of Washington
Why Is Alexander L. Greninger Influential?
(Suggest an Edit or Addition)According to Wikipedia, Alexander L. Greninger is assistant director of the UW Medicine Clinical Virology Laboratory and a UW assistant professor of Laboratory Medicine. His research is focused on genomic and proteomic characterization of a variety of human viruses and bacteria, with a focus on respiratory viruses and human herpesviruses.
Alexander L. Greninger's Published Works
Number of citations in a given year to any of this author's works
Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- Covid-19 in Critically Ill Patients in the Seattle Region — Case Series (2020) (1717)
- Covid-19 in Critically Ill Patients in the Seattle Region — Case Series (2020) (587)
- Performance Characteristics of the Abbott Architect SARS-CoV-2 IgG Assay and Seroprevalence in Boise, Idaho (2020) (486)
- Rapid metagenomic identification of viral pathogens in clinical samples by real-time nanopore sequencing analysis (2015) (428)
- A cloud-compatible bioinformatics pipeline for ultrarapid pathogen identification from next-generation sequencing of clinical samples (2014) (412)
- Comparative Performance of SARS-CoV-2 Detection Assays Using Seven Different Primer-Probe Sets and One Assay Kit (2020) (381)
- A novel outbreak enterovirus D68 strain associated with acute flaccid myelitis cases in the USA (2012-14): a retrospective cohort study. (2015) (327)
- Neutralizing antibodies correlate with protection from SARS-CoV-2 in humans during a fishery vessel outbreak with high attack rate (2020) (315)
- Detection of SARS-CoV-2 with SHERLOCK One-Pot Testing (2020) (310)
- Coast-to-Coast Spread of SARS-CoV-2 during the Early Epidemic in the United States (2020) (284)
- Recovery of divergent avian bornaviruses from cases of proventricular dilatation disease: Identification of a candidate etiologic agent (2008) (274)
- Neutralizing Antibodies Correlate with Protection from SARS-CoV-2 in Humans during a Fishery Vessel Outbreak with a High Attack Rate (2020) (244)
- Point-of-care testing for COVID-19 using SHERLOCK diagnostics (2020) (222)
- Comparison of Commercially Available and Laboratory-Developed Assays for In Vitro Detection of SARS-CoV-2 in Clinical Laboratories (2020) (216)
- Genomic surveillance reveals multiple introductions of SARS-CoV-2 into Northern California (2020) (216)
- The Perils of Pathogen Discovery: Origin of a Novel Parvovirus-Like Hybrid Genome Traced to Nucleic Acid Extraction Spin Columns (2013) (215)
- Characterization of orally efficacious influenza drug with high resistance barrier in ferrets and human airway epithelia (2019) (214)
- Erratum to: Clinical metagenomic identification of Balamuthia mandrillaris encephalitis and assembly of the draft genome: the continuing case for reference genome sequencing (2016) (196)
- A Metagenomic Analysis of Pandemic Influenza A (2009 H1N1) Infection in Patients from North America (2010) (184)
- Cryptic transmission of SARS-CoV-2 in Washington State (2020) (180)
- In vivo antiviral host transcriptional response to SARS-CoV-2 by viral load, sex, and age (2020) (176)
- Identification of cardioviruses related to Theiler's murine encephalomyelitis virus in human infections (2008) (170)
- A human coronavirus evolves antigenically to escape antibody immunity (2020) (165)
- The complete genome of klassevirus – a novel picornavirus in pediatric stool (2009) (163)
- The 3A Protein from Multiple Picornaviruses Utilizes the Golgi Adaptor Protein ACBD3 To Recruit PI4KIIIβ (2012) (152)
- Efficacy and Safety of NVX-CoV2373 in Adults in the United States and Mexico (2021) (151)
- Affinity purification–mass spectrometry and network analysis to understand protein-protein interactions (2014) (148)
- Global identification of peptidase specificity by multiplex substrate profiling (2012) (141)
- Discovery of a Novel Polyomavirus in Acute Diarrheal Samples from Children (2012) (134)
- DIRECT RT-qPCR DETECTION OF SARS-CoV-2 RNA FROM PATIENT NASOPHARYNGEAL SWABS WITHOUT AN RNA EXTRACTION STEP (2020) (123)
- Orally Efficacious Broad-Spectrum Ribonucleoside Analog Inhibitor of Influenza and Respiratory Syncytial Viruses (2018) (118)
- Cryptic transmission of SARS-CoV-2 in Washington state (2020) (116)
- Detection of SARS-CoV-2 Among Residents and Staff Members of an Independent and Assisted Living Community for Older Adults — Seattle, Washington, 2020 (2020) (110)
- SARS-CoV-2 breakthrough infections elicit potent, broad, and durable neutralizing antibody responses (2022) (109)
- Enhanced arbovirus surveillance with deep sequencing: Identification of novel rhabdoviruses and bunyaviruses in Australian mosquitoes. (2014) (107)
- Clinical metagenomic identification of Balamuthia mandrillaris encephalitis and assembly of the draft genome: the continuing case for reference genome sequencing (2015) (101)
- A decade of RNA virus metagenomics is (not) enough (2017) (101)
- Reinfection with SARS-CoV-2 and Failure of Humoral Immunity: a case report. (2020) (100)
- Clinical Features and Outcomes of 105 Hospitalized Patients With COVID-19 in Seattle, Washington (2020) (99)
- Comparison of Unsupervised Home Self-collected Midnasal Swabs With Clinician-Collected Nasopharyngeal Swabs for Detection of SARS-CoV-2 Infection (2020) (99)
- Outbreak Investigation of COVID-19 Among Residents and Staff of an Independent and Assisted Living Community for Older Adults in Seattle, Washington. (2020) (99)
- The challenge of diagnostic metagenomics (2018) (97)
- Dynamics of Neutralizing Antibody Titers in the Months After Severe Acute Respiratory Syndrome Coronavirus 2 Infection (2020) (94)
- Rapid Metagenomic Next-Generation Sequencing during an Investigation of Hospital-Acquired Human Parainfluenza Virus 3 Infections (2016) (93)
- Experimental induction of proventricular dilatation disease in cockatiels (Nymphicus hollandicus) inoculated with brain homogenates containing avian bornavirus 4 (2009) (91)
- Authentic Modeling of Human Respiratory Virus Infection in Human Pluripotent Stem Cell-Derived Lung Organoids (2019) (89)
- Dynamics of neutralizing antibody titers in the months after SARS-CoV-2 infection. (2020) (87)
- Direct RT-qPCR detection of SARS-CoV-2 RNA from patient nasopharyngeal swabs without an RNA extraction step (2020) (75)
- Analysis of Naturally Occurring Avian Bornavirus Infection and Transmission during an Outbreak of Proventricular Dilatation Disease among Captive Psittacine Birds (2009) (72)
- Worldwide circulation of HSV-2 × HSV-1 recombinant strains (2017) (71)
- Validation and Implementation of Clinical Laboratory Improvements Act-Compliant Whole-Genome Sequencing in the Public Health Microbiology Laboratory (2017) (66)
- Identification of multiple large deletions in ORF7a resulting in in-frame gene fusions in clinical SARS-CoV-2 isolates (2020) (62)
- Performance Characteristics of the Abbott Architect SARS-CoV-2 IgG Assay and Seroprevalence Testing in Idaho (2020) (62)
- Hydroxychloroquine as Postexposure Prophylaxis to Prevent Severe Acute Respiratory Syndrome Coronavirus 2 Infection (2020) (61)
- A scaffold protein connects type IV pili with the Chp chemosensory system to mediate activation of virulence signaling in Pseudomonas aeruginosa (2016) (60)
- Comparative Performance of SARS-CoV-2 Detection Assays using Seven Different Primer/Probe Sets and One Assay Kit. (2020) (56)
- SARS-CoV-2 ORF6 Disrupts Bidirectional Nucleocytoplasmic Transport through Interactions with Rae1 and Nup98 (2021) (55)
- Prolonged Shedding of Human Coronavirus in Hematopoietic Cell Transplant Recipients: Risk Factors and Viral Genome Evolution (2017) (55)
- De novo emergence of a remdesivir resistance mutation during treatment of persistent SARS-CoV-2 infection in an immunocompromised patient: a case report (2022) (55)
- Analytical Sensitivity of the Abbott BinaxNOW COVID-19 Ag Card (2020) (54)
- Metagenomic analysis reveals clinical SARS-CoV-2 infection and bacterial or viral superinfection and colonization (2020) (53)
- Clinical, laboratory, and temporal predictors of neutralizing antibodies to SARS-CoV-2 among COVID-19 convalescent plasma donor candidates. (2020) (53)
- The Laboratory Diagnosis of COVID-19-- Frequently-Asked Questions (2020) (52)
- ACBD3 Interaction with TBC1 Domain 22 Protein Is Differentially Affected by Enteroviral and Kobuviral 3A Protein Binding (2013) (52)
- Cultivation and Serological Characterization of a Human Theiler's-Like Cardiovirus Associated with Diarrheal Disease (2010) (52)
- Validation and verification of the Abbott RealTime SARS-CoV-2 assay analytical and clinical performance (2020) (52)
- Evidence for SARS-CoV-2 Delta and Omicron co-infections and recombination (2022) (50)
- Whole-Genome Sequencing of Methicillin-Resistant Staphylococcus aureus Resistant to Fifth-Generation Cephalosporins Reveals Potential Non-mecA Mechanisms of Resistance (2016) (50)
- Oral prodrug of remdesivir parent GS-441524 is efficacious against SARS-CoV-2 in ferrets (2021) (49)
- Hydroxychloroquine with or without azithromycin for treatment of early SARS-CoV-2 infection among high-risk outpatient adults: A randomized clinical trial (2020) (49)
- Clinical evaluation of the BioFire® Respiratory Panel 2.1 and detection of SARS-CoV-2 (2020) (48)
- Ultrasensitive Capture of Human Herpes Simplex Virus Genomes Directly from Clinical Samples Reveals Extraordinarily Limited Evolution in Cell Culture (2018) (48)
- Inhibition of Coronavirus Entry In Vitro and Ex Vivo by a Lipid-Conjugated Peptide Derived from the SARS-CoV-2 Spike Glycoprotein HRC Domain (2020) (47)
- Validation of SARS-CoV-2 detection across multiple specimen types (2020) (47)
- Hospitalization and mortality associated with SARS-CoV-2 viral clades in COVID-19 (2021) (46)
- Quantification of BK Virus Standards by Quantitative Real-Time PCR and Droplet Digital PCR Is Confounded by Multiple Virus Populations in the WHO BKV International Standard. (2017) (46)
- Pooling of SARS-CoV-2 samples to increase molecular testing throughput (2020) (45)
- Distinct Zika Virus Lineage in Salvador, Bahia, Brazil (2016) (44)
- Sensitive Recovery of Complete SARS-CoV-2 Genomes from Clinical Samples by Use of Swift Biosciences’ SARS-CoV-2 Multiplex Amplicon Sequencing Panel (2020) (44)
- Microfluidic affinity and ChIP-seq analyses converge on a conserved FOXP2-binding motif in chimp and human, which enables the detection of evolutionarily novel targets (2013) (43)
- Detection of treatment-resistant infectious HIV after genome-directed antiviral endonuclease therapy. (2016) (43)
- Occurrence and Timing of Subsequent SARS-CoV-2 RT-PCR Positivity Among Initially Negative Patients (2020) (42)
- A SARS-CoV-2 Nucleocapsid Variant that Affects Antigen Test Performance (2021) (42)
- Recent Outbreaks of Shigellosis in California Caused by Two Distinct Populations of Shigella sonnei with either Increased Virulence or Fluoroquinolone Resistance (2016) (42)
- CRISPR-Cas9 gene editing of hepatitis B virus in chronically infected humanized mice (2020) (40)
- Comparative genomic, transcriptomic, and proteomic reannotation of human herpesvirus 6 (2018) (40)
- Biology of breast cancer in Nigerian women: a pilot study. (2012) (39)
- VAPiD: a lightweight cross-platform viral annotation pipeline and identification tool to facilitate virus genome submissions to NCBI GenBank (2019) (39)
- Two Rapidly Growing Mycobacterial Species Isolated from a Brain Abscess: First Whole-Genome Sequences of Mycobacterium immunogenum and Mycobacterium llatzerense (2015) (38)
- The Mitochondrial Genome and a 60‐kb Nuclear DNA Segment from Naegleria fowleri, the Causative Agent of Primary Amoebic Meningoencephalitis (2013) (37)
- Coast-to-coast spread of SARS-CoV-2 in the United States revealed by genomic epidemiology (2020) (35)
- DNA Microarray for Detection of Gastrointestinal Viruses (2014) (35)
- Gene editing and elimination of latent herpes simplex virus in vivo (2020) (35)
- De novo emergence of a remdesivir resistance mutation during treatment of persistent SARS-CoV-2 infection in an immunocompromised patient: A case report (2021) (34)
- Validation of SARS-CoV-2 detection across multiple specimen types. (2020) (34)
- Viral genomes reveal patterns of the SARS-CoV-2 outbreak in Washington State (2020) (34)
- Serological Evidence of Human Klassevirus Infection (2010) (34)
- Prevalence of Coronavirus Disease 2019 Infection and Outcomes Among Symptomatic Healthcare Workers in Seattle, Washington (2020) (34)
- Biotechnology and Bioterrorism: An Unprecedented World (2004) (33)
- Associations between SARS-CoV-2 variants and risk of COVID-19 hospitalization among confirmed cases in Washington State: a retrospective cohort study (2021) (32)
- A Genomic Survey of SARS-CoV-2 Reveals Multiple Introductions into Northern California without a Predominant Lineage (2020) (32)
- Anti-SARS-CoV-2 Antibody Levels Measured by the AdviseDx SARS-CoV-2 Assay Are Concordant with Previously Available Serologic Assays but Are Not Fully Predictive of Sterilizing Immunity (2021) (31)
- Quantitative measurement of infectious virus in SARS-CoV-2 Alpha, Delta and Epsilon variants reveals higher infectivity (viral titer:RNA ratio) in clinical samples containing the Delta and Epsilon variants (2021) (31)
- Variants of concern are overrepresented among post-vaccination breakthrough infections of SARS-CoV-2 in Washington State (2021) (31)
- Occurrence and Timing of Subsequent SARS-CoV-2 RT-PCR Positivity Among Initially Negative Patients. (2020) (30)
- Stability of SARS-CoV-2 in Phosphate-Buffered Saline for Molecular Detection (2020) (30)
- In vivo antiviral host response to SARS-CoV-2 by viral load, sex, and age (2020) (30)
- In vivo disruption of latent HSV by designer endonuclease therapy. (2016) (30)
- Optimization and clinical validation of dual-target RT-LAMP for SARS-CoV-2 (2020) (29)
- Rule-Out Outbreak: 24-Hour Metagenomic Next-Generation Sequencing for Characterizing Respiratory Virus Source for Infection Prevention (2017) (29)
- SARS-CoV-2 Viral Load on Admission Is Associated With 30-Day Mortality (2020) (29)
- Multiplexing primer/probe sets for detection of SARS-CoV-2 by qRT-PCR (2020) (28)
- An optimized methodology for whole genome sequencing of RNA respiratory viruses from nasopharyngeal aspirates (2018) (28)
- Changes in SARS-CoV-2 Positivity Rate in Outpatients in Seattle and Washington State, March 1-April 16, 2020. (2020) (28)
- Metagenomics to Assist in the Diagnosis of Bloodstream Infection. (2019) (27)
- Trajectory of Viral RNA Load Among Persons With Incident SARS-CoV-2 G614 Infection (Wuhan Strain) in Association With COVID-19 Symptom Onset and Severity (2022) (27)
- Occurrence and Timing of Subsequent Severe Acute Respiratory Syndrome Coronavirus 2 Reverse-transcription Polymerase Chain Reaction Positivity Among Initially Negative Patients. (2021) (26)
- Occurrence and Timing of Subsequent Severe Acute Respiratory Syndrome Coronavirus 2 Reverse-transcription Polymerase Chain Reaction Positivity Among Initially Negative Patients (2020) (26)
- Viral Entry Properties Required for Fitness in Humans Are Lost through Rapid Genomic Change during Viral Isolation (2018) (26)
- Replicating RNA platform enables rapid response to the SARS-CoV-2 Omicron variant and elicits enhanced protection in naïve hamsters compared to ancestral vaccine (2022) (25)
- Dual-strain genital herpes simplex virus type 2 (HSV-2) infection in the US, Peru, and 8 countries in sub-Saharan Africa: A nested cross-sectional viral genotyping study (2017) (25)
- Hamster organotypic modeling of SARS-CoV-2 lung and brainstem infection (2020) (24)
- Picornavirus--host interactions to construct viral secretory membranes. (2015) (23)
- Inherited Chromosomally Integrated Human Herpesvirus 6 Demonstrates Tissue-Specific RNA Expression In Vivo That Correlates with an Increased Antibody Immune Response (2019) (23)
- Large, stable, contemporary interspecies recombination events in circulating human herpes simplex viruses. (2019) (23)
- Western Washington State COVID-19 Experience: Keys to Flattening the Curve and Effective Health System Response (2020) (23)
- Cooperating H3N2 Influenza Virus Variants Are Not Detectable in Primary Clinical Samples (2017) (22)
- The Unstructured Paramyxovirus Nucleocapsid Protein Tail Domain Modulates Viral Pathogenesis through Regulation of Transcriptase Activity (2018) (22)
- Evolutionary History of Endogenous Human Herpesvirus 6 Reflects Human Migration out of Africa (2020) (22)
- Low Prevalence of Severe Acute Respiratory Syndrome Coronavirus 2 Among Pregnant and Postpartum Patients With Universal Screening in Seattle, Washington (2020) (21)
- Detection of SARS-CoV-2 by bronchoscopy after negative nasopharyngeal testing: Stay vigilant for COVID-19 (2020) (21)
- Digital detection of endonuclease mediated gene disruption in the HIV provirus (2016) (21)
- Measuring infectious SARS-CoV-2 in clinical samples reveals a higher viral titer:RNA ratio for Delta and Epsilon vs. Alpha variants (2022) (21)
- Viral genomes reveal patterns of the SARS-CoV-2 outbreak in Washington State (2021) (21)
- The human clone ST22 SCCmec IV methicillin-resistant Staphylococcus aureus isolated from swine herds and wild primates in Nepal: is man the common source? (2018) (20)
- In silico detection of SARS-CoV-2 specific B-cell epitopes and validation in ELISA for serological diagnosis of COVID-19 (2020) (20)
- Immunogenicity of a heterologous COVID-19 vaccine after failed vaccination in a lymphoma patient (2021) (19)
- A Herpesviral induction of RAE-1 NKG2D ligand expression occurs through release of HDAC mediated repression (2016) (19)
- Performance characteristics of the Abbott Alinity m SARS-CoV-2 assay (2021) (19)
- Pathogen or Bystander: Clinical Significance of Detecting Human Herpesvirus 6 in Pediatric Cerebrospinal Fluid (2020) (18)
- Copy Number Heterogeneity, Large Origin Tandem Repeats, and Interspecies Recombination in Human Herpesvirus 6A (HHV-6A) and HHV-6B Reference Strains (2018) (18)
- Specific allelic discrimination of N501Y and other SARS-CoV-2 mutations by ddPCR detects B.1.1.7 lineage in Washington State (2021) (17)
- Highly conserved intragenic HSV-2 sequences: Results from next-generation sequencing of HSV-2 UL and US regions from genital swabs collected from 3 continents. (2017) (17)
- Variants of Concern Are Overrepresented Among Postvaccination Breakthrough Infections of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in Washington State (2021) (17)
- Comparative genomics and full-length Tprk profiling of Treponema pallidum subsp. pallidum reinfection (2019) (17)
- Epidemiological and genomic characterization of community-acquired Clostridium difficile infections (2018) (17)
- Prolonged persistence of PCR-detectable virus during an outbreak of SARS-CoV-2 in an inpatient geriatric psychiatry unit in King County, Washington (2020) (17)
- Prevalent and Diverse Intratumoral Oncoprotein-Specific CD8+ T Cells within Polyomavirus-Driven Merkel Cell Carcinomas (2020) (17)
- Heterogeneous Antimicrobial Susceptibility Characteristics in Pseudomonas aeruginosa Isolates from Cystic Fibrosis Patients (2018) (17)
- Emergence of SARS-CoV-2 Resistance with Monoclonal Antibody Therapy (2021) (16)
- Interaction between FMDV Lpro and transcription factor ADNP is required for optimal viral replication. (2017) (16)
- Association of NMT2 with the acyl-CoA carrier ACBD6 protects the N-myristoyltransferase reaction from palmitoyl-CoA[S] (2016) (16)
- SARS-CoV-2 B.1.1.7 and B.1.351 variants of concern induce lethal disease in K18-hACE2 transgenic mice despite convalescent plasma therapy (2021) (16)
- Copy Number Heterogeneity of JC Virus Standards (2016) (15)
- The SARS-CoV-2 Omicron Variant Does Not Have Higher Nasal Viral Loads Compared to the Delta Variant in Symptomatic and Asymptomatic Individuals (2022) (15)
- Orally Efficacious Broad-Spectrum Allosteric Inhibitor of Paramyxovirus Polymerase (2020) (15)
- Associations between SARS-CoV-2 variants and risk of COVID-19 hospitalization among confirmed cases in Washington State: a retrospective cohort study. (2022) (15)
- Development of the RealTime SARS-CoV-2 quantitative Laboratory Developed Test and correlation with viral culture as a measure of infectivity (2021) (15)
- Predicting Infectivity: Comparing Four PCR-based Assays to Detect Culturable SARS-CoV-2 in Clinical Samples (2021) (14)
- Retrospective clinical evaluation of 4 lateral flow assays for the detection of SARS-CoV-2 IgG (2020) (14)
- Genomics and transcriptomics yields a system-level view of the biology of the pathogen Naegleria fowleri (2021) (14)
- Limited Marginal Utility of Deep Sequencing for HIV Drug Resistance Testing in the Age of Integrase Inhibitors (2018) (14)
- Prospective, Real-time Metagenomic Sequencing During Norovirus Outbreak Reveals Discrete Transmission Clusters (2018) (14)
- Treponema pallidum genome sequencing from six continents reveals variability in vaccine candidate genes and dominance of Nichols clade strains in Madagascar (2021) (14)
- Molecular Features of the Measles Virus Viral Fusion Complex That Favor Infection and Spread in the Brain (2021) (14)
- Genetic engineering of Treponema pallidum subsp. pallidum, the Syphilis Spirochete (2021) (14)
- Development and validation of direct RT-LAMP for SARS-CoV-2 (2020) (14)
- Expedited SARS-CoV-2 screening of donors and recipients supports continued solid organ transplantation (2020) (13)
- International Spread of Multidrug-Resistant Campylobacter coli in Men Who Have Sex With Men in Washington State and Québec, 2015–2018 (2019) (13)
- A comparative ‘omics approach to candidate pathogenicity factor discovery in the brain-eating amoeba Naegleria fowleri (2020) (13)
- Specific allelic discrimination of N501Y and other SARS‐CoV‐2 mutations by ddPCR detects B.1.1.7 lineage in Washington State (2021) (13)
- Hijacking the Fusion Complex of Human Parainfluenza Virus as an Antiviral Strategy (2020) (12)
- Viral Genetics Modulate Orolabial Herpes Simplex Virus Type 1 Shedding in Humans (2018) (12)
- Cell free DNA from respiratory pathogens is detectable in the blood plasma of Cystic Fibrosis patients (2020) (12)
- Draft Genome Sequences of Leviviridae RNA Phages EC and MB Recovered from San Francisco Wastewater (2015) (12)
- Predicting infectivity: comparing four PCR‐based assays to detect culturable SARS‐CoV‐2 in clinical samples (2021) (12)
- Viral and Symptom Rebound in Untreated COVID-19 Infection (2022) (11)
- Genome Sequences of Three Novel Bunyaviruses, Two Novel Rhabdoviruses, and One Novel Nyamivirus from Washington State Moths (2017) (11)
- Reliability of self-sampling for accurate assessment of respiratory virus viral and immunologic kinetics (2020) (11)
- Thermodynamically coupled biosensors for detecting neutralizing antibodies against SARS-CoV-2 variants (2022) (11)
- Acute Liver Failure Due to Echovirus 9 Associated With Persistent B-Cell Depletion From Rituximab (2017) (11)
- Draft Genome Sequences of Four NDM-1-Producing Klebsiella pneumoniae Strains from a Health Care Facility in Northern California (2015) (11)
- CrAssphage and its bacterial host in cat feces (2021) (11)
- Estimation of Full-Length TprK Diversity in Treponema pallidum subsp. pallidum (2020) (11)
- Distribution of Staphylococcus species in dairy cows, workers and shared farm environments (2018) (11)
- Draft Genome Sequences of Ciliovirus and Brinovirus from San Francisco Wastewater (2015) (10)
- Evaluating Antibody Mediated Protection against Alpha, Beta, and Delta SARS-CoV-2 Variants of Concern in K18-hACE2 Transgenic Mice (2022) (10)
- Clinical and Infection Prevention Applications of SARS-CoV-2 Genotyping: An IDSA/ASM Consensus Review Document. (2021) (10)
- Analysis of SARS-CoV-2 infection dynamic in vivo using reporter-expressing viruses (2021) (10)
- SARS-CoV-2 ORF6 disrupts nucleocytoplasmic transport through interactions with Rae1 and Nup98 (2020) (10)
- Longitudinal TprK profiling of in vivo and in vitro-propagated Treponema pallidum subsp. pallidum reveals accumulation of antigenic variants in absence of immune pressure (2021) (9)
- The First Quarter of SARS-CoV-2 Testing: the University of Washington Medicine Experience (2020) (9)
- SARS-CoV-2 VOC type and biological sex affect molnupiravir efficacy in severe COVID-19 dwarf hamster model (2022) (9)
- Whole-genome analysis of extraintestinal pathogenic Escherichia coli (ExPEC) MDR ST73 and ST127 isolated from endangered southern resident killer whales (Orcinus orca). (2019) (9)
- The impact of B‐cell‐directed therapy on SARS‐CoV‐2 vaccine efficacy in chronic lymphocytic leukaemia (2022) (8)
- LAVA: a streamlined visualization tool for longitudinal analysis of viral alleles (2019) (8)
- Clinical Utility of Unbiased Metagenomic Next-Generation Sequencing in Diagnosis of Acute Infectious Diseases: A Prospective Case Series (2015) (8)
- Anti-SARS-CoV-2 IgG antibodies are associated with reduced viral load (2020) (8)
- A Novel, Widespread qacA Allele Results in Reduced Chlorhexidine Susceptibility in Staphylococcus epidermidis (2019) (8)
- Mutations in viral nucleocapsid protein and endoRNase are discovered to associate with COVID19 hospitalization risk (2022) (8)
- Clinical, laboratory, and temporal predictors of neutralizing antibodies to SARS-CoV-2 after COVID-19. (2020) (8)
- Rapid and accurate identification of SARS-CoV-2 Omicron variants using droplet digital PCR (RT-ddPCR) (2022) (8)
- Draft Genome Sequences of Marine RNA Viruses SF-1, SF-2, and SF-3 Recovered from San Francisco Wastewater (2015) (8)
- Reducing COVID-19 quarantine with SARS-CoV-2 testing: a simulation study (2021) (8)
- Rapid adaptation to human protein kinase R by a unique genomic rearrangement in rhesus cytomegalovirus (2020) (7)
- Phylogenetic estimates of SARS-CoV-2 introductions into Washington State (2021) (7)
- Preprocedural Surveillance Testing for SARS-CoV-2 in an Asymptomatic Population in the Seattle Region Shows Low Rates of Positivity (2020) (7)
- Complete genome sequence of sequential Pandoraea apista isolates from the same cystic fibrosis patient supports a model of chronic colonization with in vivo strain evolution over time. (2017) (7)
- Draft Genome Sequence of Goose Dicistrovirus (2016) (7)
- Clinical Performance and Trends during the First Two Months of Monkeypox Virus PCR Testing at Two United States Reference Labs (2022) (7)
- Isolation and characterization of the fall Chinook aquareovirus (2017) (7)
- Myeloablation-associated deletion of ORF4 in a human coronavirus 229E infection (2017) (7)
- Anti-SARS-CoV-2 antibody levels are concordant across multiple platforms but are not fully predictive of sterilizing immunity (2021) (7)
- Outcomes associated with SARS-CoV-2 viral clades in COVID-19 (2020) (7)
- Fast SARS-CoV-2 Variant Detection Using Snapback Primer High-Resolution Melting (2021) (6)
- T cell receptor sequencing identifies prior SARS-CoV-2 infection and correlates with neutralizing antibodies and disease severity (2022) (6)
- Draft Genome Sequence of Tombunodavirus UC1 (2015) (6)
- Clinical and Infection Prevention Applications of Severe Acute Respiratory Syndrome Coronavirus 2 Genotyping: An Infectious Diseases Society of America/American Society for Microbiology Consensus Review Document (2021) (6)
- Evaluation of Genotypic Antiviral Resistance Testing as an Alternative to Phenotypic Testing in a Patient with DOCK8 Deficiency and Severe HSV-1 Disease. (2020) (6)
- Estimating the False-Positive Rate of Highly Automated SARS-CoV-2 Nucleic Acid Amplification Testing (2021) (6)
- Private collection: high correlation of sample collection and patient admission date in clinical microbiological testing complicates sharing of phylodynamic metadata (2018) (6)
- Test it earlier, result it faster, makes us stronger: how rapid viral diagnostics enable therapeutic success (2021) (6)
- Inherited chromosomally integrated HHV-6 demonstrates tissue-specific RNA expression in vivo that correlates with increased antibody immune response (2019) (6)
- Societal Implications of the Internet of Pathogens (2019) (6)
- T-cell receptor sequencing identifies prior SARS-CoV-2 infection and correlates with neutralizing antibody titers and disease severity (2021) (6)
- Narrow transmission bottlenecks and limited within-host viral diversity during a SARS-CoV-2 outbreak on a fishing boat (2022) (6)
- Clostridium perfringens sepsis masquerading as a hemolytic transfusion reaction (2017) (6)
- Genome-Wide Approach to the CD4 T-Cell Response to Human Herpesvirus 6B (2019) (6)
- Oral prodrug of remdesivir parent GS-441524 is efficacious against SARS-CoV-2 and a variant of concern in ferrets (2021) (6)
- Efficacy, safety, and immunogenicity of a booster regimen of Ad26.COV2.S vaccine against COVID-19 (ENSEMBLE2): results of a randomised, double-blind, placebo-controlled, phase 3 trial (2022) (5)
- A Method for Variant Agnostic Detection of SARS-CoV-2, Rapid Monitoring of Circulating Variants, and Early Detection of Emergent Variants Such as Omicron (2022) (5)
- Draft Genome Sequences of Six Novel Picorna-Like Viruses from Washington State Spiders (2017) (5)
- Mycobacterium grossiae sp. nov., a rapidly growing, scotochromogenic species isolated from human clinical respiratory and blood culture specimens. (2017) (5)
- Identification of Omicron-Delta Coinfections Using PCR-Based Genotyping (2022) (5)
- Reliability of Self-Sampling for Accurate Assessment of Respiratory Virus Viral and Immunologic Kinetics (2020) (5)
- Delta breakthrough infections elicit potent, broad and durable neutralizing antibody responses (2021) (5)
- SARS-CoV-2 variant of concern type and biological sex affect efficacy of molnupiravir in dwarf hamster model of severe COVID-19 (2022) (5)
- In Vivo Generation of BK and JC Polyomavirus Defective Viral Genomes in Human Urine Samples Associated with Higher Viral Loads (2021) (5)
- Draft Genome Sequence of Laverivirus UC1, a Dicistrovirus-Like RNA Virus Featuring an Unusual Genome Organization (2015) (4)
- One future of clinical metagenomic sequencing for infectious diseases (2019) (4)
- A Bifluorescent-Based Assay for the Identification of Neutralizing Antibodies against SARS-CoV-2 Variants of Concern In Vitro and In Vivo (2021) (4)
- Inactivation of genes in oxidative respiration and iron acquisition pathways in pediatric clinical isolates of Small colony variant Enterobacteriaceae (2019) (4)
- Copy number heterogeneity, large origin tandem repeats, and interspecies recombination in HHV-6A and HHV-6B reference strains (2017) (4)
- Draft Genome Sequence of Kerstersia gyiorum CG1, Isolated from a Leg Ulcer (2015) (4)
- Optimized Post-Vaccination Strategies and Preventative Measures for SARS-CoV-2 (2021) (4)
- When To Retest: an Examination of Repeat COVID-19 PCR Patterns in an Ambulatory Population (2020) (4)
- Herpes Simplex Virus Mistyping due to HSV-1 × HSV-2 Interspecies Recombination in Viral Gene Encoding Glycoprotein B (2020) (4)
- A method for variant agnostic detection of SARS-CoV-2, rapid monitoring of circulating variants, detection of mutations of biological significance, and early detection of emergent variants such as Omicron (2022) (4)
- Virology under the Microscope—a Call for Rational Discourse (2023) (4)
- High-resolution profiling of human cytomegalovirus cell-free DNA in human plasma highlights its exceptionally fragmented nature (2020) (4)
- The Brief Case: Inherited Chromosomally Integrated Human Herpesvirus 6 (HHV-6) in the Age of Multiplex HHV-6 Testing (2019) (4)
- Discovery of a persistent Zika virus lineage in Bahia, Brazil (2016) (4)
- Estimation of Full-Length TprK Diversity in Treponema pallidum subspecies pallidum (2020) (4)
- Monoclonal antibody treatment drives rapid culture conversion in SARS-CoV-2 infection (2021) (4)
- Draft Genome Sequence of Mycobacterium heraklionense Strain Davo (2015) (4)
- Identification of Mycobacterium porcinum in patients with cystic Fibrosis: Pathogen or contaminant? (2020) (4)
- Successful treatment of prolonged, severe COVID-19 lower respiratory tract disease in a B-cell ALL patient with an extended course of remdesivir and nirmatrelvir/ritonavir. (2022) (3)
- Prospective real-time metagenomic sequencing during norovirus outbreak reveals discrete transmission clusters (2018) (3)
- Humoral and Cellular Responses to SARS-CoV-2 Vaccines Before and After Chimeric Antigen Receptor-Modified T Cell Therapy (2022) (3)
- Clinical Performance Characteristics of the Swift Normalase Amplicon Panel for Sensitive Recovery of Severe Acute Respiratory Syndrome Coronavirus 2 Genomes (2021) (3)
- Trillions and Trillions: Herpes Simplex Virus–1 Hepatitis in an Immunocompetent Adult (2019) (3)
- Phylogenetic estimates of SARS-CoV-2 introductions into Washington State (2021) (3)
- Endogenously Produced SARS-CoV-2 Specific IgG Antibodies May Have a Limited Impact on Clearing Nasal Shedding of Virus during Primary Infection in Humans (2021) (3)
- Draft Genome Sequence of Mycobacterium obuense Strain UC1, Isolated from Patient Sputum (2015) (3)
- Associations Between Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Variants and Risk of Coronavirus Disease 2019 (COVID-19) Hospitalization Among Confirmed Cases in Washington State: A Retrospective Cohort Study (2022) (3)
- The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters—King County, Washington (2022) (3)
- Modifying laboratory testing via home brew during the COVID-19 pandemic (2021) (3)
- Molecular Analysis of SARS-CoV-2 Lineages in Armenia (2022) (3)
- Host–pathogen dynamics in longitudinal clinical specimens from patients with COVID-19 (2021) (3)
- Estimating the false positive rate of highly automated SARS-CoV-2 nucleic acid amplification testing (2021) (3)
- Clinical and Virologic Characteristics and Outcomes of Coronavirus Disease 2019 at a Cancer Center (2021) (3)
- Optimal test-assisted quarantine strategies for COVID-19 (2020) (3)
- Single-chain variable fragment antibody constructs neutralize measles virus infection in vitro and in vivo (2021) (3)
- Mycobacterium talmoniae, a Potential Pulmonary Pathogen Isolated from Multiple Patients with Bronchiectasis in the United States, Including the First Case of Clinical Disease in a Patient with Cystic Fibrosis (2018) (3)
- Sensitive Identification of Bacterial DNA in Clinical Specimens by Broad-Range 16S rRNA Gene Enrichment (2020) (3)
- Symptom and Viral Rebound in Untreated SARS-CoV-2 Infection (2023) (2)
- Performance of anterior nares and tongue swabs for nucleic acid, Nucleocapsid, and Spike antigen testing for detecting SARS-CoV-2 against nasopharyngeal PCR and viral culture (2022) (2)
- Point-of-care testing for COVID-19 using SHERLOCK diagnostics (v.20200505) (2022) (2)
- Tuning DNA binding affinity and cleavage specificity of an engineered gene-targeting nuclease via surface display, flow cytometry and cellular analyses (2017) (2)
- Clinical and Infection Prevention Applications of SARS-CoV-2 Genotyping: an IDSA/ASM Consensus Review Document. (2021) (2)
- RADx Variant Task Force Program for Assessing the Impact of Variants on SARS-CoV-2 Molecular and Antigen Tests (2021) (2)
- ORF-Interrupting Mutations in Monkeypox Virus Genomes from Washington and Ohio, 2022 (2022) (2)
- Genomic and proteomic analysis of Human herpesvirus 6 reveals distinct clustering of acute versus inherited forms and reannotation of reference strain (2017) (2)
- Safety, Immunogenicity and Efficacy of NVX-CoV2373 in Adolescents in PREVENT-19: A Randomized, Phase 3 Trial (2022) (2)
- Draft Genome Sequence of Mycobacterium elephantis Strain Lipa (2015) (2)
- Evaluation and clinical validation of monkeypox (mpox) virus real-time PCR assays (2022) (2)
- Human parainfluenza virus evolution during lung infection of immunocompromised individuals promotes viral persistence (2021) (2)
- Whole Genome Sequence Analysis of Brucella melitensis Phylogeny and Virulence Factors (2021) (2)
- Heterologous SARS‐CoV‐2 vaccinations in patients with B‐cell lymphoid malignancies (2021) (2)
- Implementation of a fully remote randomized clinical trial with cardiac monitoring (2021) (2)
- First Complete Genome Sequence of Corynebacterium riegelii (2017) (2)
- Comparison of Three Adenovirus Quantitative PCR Assays with ATCC Reference Strains and Clinical Samples (2019) (2)
- Modeling Infection and Tropism of Human Parainfluenza Virus Type 3 in Ferrets (2022) (2)
- NGSocomial Infections: High-Resolution Views of Hospital-Acquired Infections Through Genomic Epidemiology (2021) (2)
- Continued in vitro cefazolin susceptibility in methicillin-susceptible Staphylococcus aureus (2018) (2)
- Retrospective Detection of SARS-CoV-2 in Symptomatic Patients prior to Widespread Diagnostic Testing in Southern California (2021) (2)
- Genomic characterization of respiratory syncytial virus 2022-2023 outbreak in Washington State, USA (2022) (2)
- Paxlovid-like nirmatrelvir/ritonavir fails to block SARS-CoV-2 transmission in ferrets (2022) (2)
- Draft Genome Sequence of Picalivirus D Recovered from San Francisco Wastewater (2015) (2)
- Duration of viral infectiousness and correlation with symptoms and diagnostic testing in non-hospitalized adults during acute SARS-CoV-2 infection: A longitudinal cohort study (2022) (2)
- Emergence of SARS-CoV-2 escape mutations during Bamlanivimab therapy in a phase II randomized clinical trial (2022) (2)
- LB-17. Efficacy of Hydroxychloroquine (HCQ) for Post-exposure Prophylaxis to Prevent Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Infection: A Blinded, Randomized, Controlled Trial (2020) (1)
- Phase 2 safety and antiviral activity of SAB-185, a novel polyclonal antibody therapy for non-hospitalized adults with COVID-19. (2023) (1)
- Monoclonal antibody treatment drives rapid culture conversion in SARS-CoV-2 infection (2022) (1)
- Narrow transmission bottlenecks and limited within-host viral diversity during a SARS-CoV-2 outbreak on a fishing boat (2022) (1)
- 20. Risk Factors for Breakthrough Cytomegalovirus (CMV) Infection and De Novo Resistance in Hematopoietic Cell Transplantation (HCT) Recipients Receiving Letermovir Prophylaxis (2021) (1)
- PATHOLOGY INFORMATICS SUMMIT 2018 (2018) (1)
- Elucidating Pathways Mediating the Relationship Between Male Sex and COVID-19 Severity (2022) (1)
- Clinical metagenomic identification of Balamuthia mandrillaris encephalitis and assembly of the draft genome: the critical need for reference strain sequencing (2015) (1)
- Human parainfluenza virus evolution during lung infection of immunocompromised humans promotes viral persistence. (2021) (1)
- 1647. Real-Time Metagenomic Sequencing Reveals Discrete Transmission Clusters Within a Hospital-Associated Norovirus Outbreak (2018) (1)
- Genomic analysis of early spread of monkeypox virus in Washington State (2022) (1)
- Draft Genome Sequence of Turicella otitidis TD1, Isolated from a Patient with Bacteremia (2015) (1)
- 116 – Fungal, Rickettsial, and Parasitic Diseases of the Nervous System (2017) (1)
- Virology under the Microscope—a Call for Rational Discourse (2023) (1)
- Model-based estimation of superinfection prevalence from limited datasets (2018) (1)
- Elevated white blood cell count does not predict Clostridium difficile nucleic acid testing results. (2021) (1)
- Draft Genome Sequence of Mycobacterium heckeshornense Strain RLE (2015) (1)
- Trajectory of viral load in a prospective population-based cohort with incident SARS-CoV-2 G614 infection (2021) (1)
- Liver immune abnormalities persist after cure of Hepatitis C Virus by anti-viral therapy (2020) (1)
- Comparison of Humoral and T-Cell Response after Sars-Cov-2 Vaccination Among Patients before and after Chimeric Antigen Receptor-Modified T Cell (CAR-T cell) Therapy (2022) (1)
- A novel qacA allele results in an elevated chlorhexidine glu conate minimum inhibitory concentration in cutaneous Staphylococcus epidermidis isolates (2018) (1)
- novel outbreak enterovirus D 68 strain associated with acute flaccid myelitis 1 ! cases in the United States from 2012-2014 : a retrospective cohort study 2 ! 3 ! (2015) (1)
- Fragment Size-Based Enrichment of Viral Sequences in Plasma Cell-Free DNA. (2022) (1)
- Erratum to: Clinical metagenomic identification of Balamuthia mandrillaris encephalitis and assembly of the draft genome: the continuing case for reference genome sequencing (2016) (1)
- Case Study: Impact of Diurnal Variations and Stormwater Dilution on SARS-CoV-2 RNA Signal Intensity at Neighborhood Scale Wastewater Pumping Stations (2022) (1)
- Human Parainfluenza Virus in Homeless Shelters before and during the COVID-19 Pandemic, Washington, USA (2022) (1)
- The impact of interspecies recombination on human herpes simplex virus evolution and host immune recognition (2018) (1)
- Virology under the Microscope—a Call for Rational Discourse (2023) (1)
- Detection and Kinetics of Subgenomic Severe Acute Respiratory Syndrome Coronavirus 2 RNA Viral Load in Longitudinal Diagnostic RNA–Positive Samples (2022) (1)
- Closing the Brief Case: Inherited Chromosomally Integrated Human Herpesvirus 6 (HHV-6) in the Age of Multiplex HHV-6 Testing (2019) (1)
- First Draft Genome Sequences of Neisseria sp. Strain 83E34 and Neisseria sp. Strain 74A18, Previously Identified as CDC Eugonic Fermenter 4b Species (2016) (1)
- Sensitive detection of highly fragmented cytomegalovirus nucleic acid in human cfDNA (2019) (1)
- High-throughput nanopore sequencing of Treponema pallidum tandem repeat genes arp and tp0470 reveals clade-specific patterns and recapitulates global whole genome phylogeny (2022) (1)
- Two Novel Iflaviruses Discovered in Bat Samples in Washington State (2022) (1)
- Unprecedented World (2004) (0)
- 1948. Evaluation of a heterologous booster vaccine regimen: Pfizer-BioNTech BNT162b2 mRNA booster vaccine following priming with Novavax NVX-CoV2373 (2022) (0)
- VAPiD: a lightweight cross-platform viral annotation pipeline and identification tool to facilitate virus genome submissions to NCBI GenBank (2018) (0)
- Protein Binding Differentially Affected by Enteroviral and Kobuviral 3 A ACBD 3 Interaction with TBC 1 Domain 22 Protein Is 2013 (2013) (0)
- Safety, Immunogenicity, and Efficacy of the NVX-CoV2373 COVID-19 Vaccine in Adolescents: A Randomized Clinical Trial. (2023) (0)
- Response of Human Liver Tissue to Innate Immune Stimuli (2020) (0)
- Draft Genome Sequence of Mycobacterium arupense Strain GUC1 (2015) (0)
- Immunocompromised Host Pneumonia: Definitions and Diagnostic Criteria: An Official American Thoracic Society Workshop Report (2023) (0)
- Genomic Analysis of Early Monkeypox Virus Outbreak Strains, Washington, USA (2023) (0)
- Dynamics of SARS-CoV-2 VOC Neutralization and Novel mAb Reveal Protection against Omicron (2023) (0)
- Divergent In vitro MIC Characteristics and underlying isogenic mutations in host-specialized Pseudomonas aeruginosa (2017) (0)
- Optimized workplace risk mitigation measures for SARS-CoV-2 in 2022 (2023) (0)
- Chromosome-Specific Human Herpesvirus 6 Integration and Hematologic Malignancies (2022) (0)
- Clinical and Infection Prevention Applications of Severe Acute Respiratory Syndrome Coronavirus 2 Genotyping: an Infectious Diseases Society of America/American Society for Microbiology Consensus Review Document (2021) (0)
- 489. SARS-CoV-2 Seroprevalence and Antibody Response Among Pregnant People in Seattle, WA (2021) (0)
- Efficacy, safety, and molecular response predictors of oral ixazomib and short-course rituximab in untreated iNHL (2022) (0)
- Treponema pallidum subsp. pallidum with an Artificially impaired TprK antigenic variation system is attenuated in the Rabbit model of syphilis (2023) (0)
- Conservation and Recombination in the Genome Sequence of Haemophilus influenzae Type f WAPHL1 (2017) (0)
- Viral Whole Genome Sequencing for Antiviral Resistance in a Child with DOCK8 Deficiency and Recurrent HSV-1 (2019) (0)
- Local-Scale phylodynamics reveal differential community impact of SARS-CoV-2 in metropolitan US county (2022) (0)
- Dynamics of SARS-CoV-2 VOC neutralization and novel mAb reveal protection against Omicron (2022) (0)
- Retrospective Clinical Evaluation of Four Lateral Flow Assays for the Detection of SARS-CoV-2 Antibodies (2020) (0)
- Genome sequencing of 196 Treponema pallidum strains from six continents reveals additional variability in vaccine candidate genes and dominance of Nichols clade strains in Madagascar (2021) (0)
- Balamuthia mandrillaris encephalitis detected by next generation sequencing of cerebrospinal fluid (2015) (0)
- Safety and Efficacy of Combined Tixagevimab and Cilgavimab Administered Intramuscularly or Intravenously in Nonhospitalized Patients With COVID-19 (2023) (0)
- Validation of SARS-CoV-2 detection across multiple specimen types. (2020) (0)
- SARS-CoV-2 seroprevalence and longitudinal antibody response following natural infection in pregnancy (2022) (0)
- Unbiased Pandemic Pathogen Detection and the Federal Register (2021) (0)
- A bifluorescent-based assay for the identification of neutralizing antibodies against SARS-CoV-2 variants of concern <italic toggle='yes'>in vitro</italic> and <italic toggle='yes'>in vivo</italic> (2021) (0)
- Cytomegalovirus breakthrough and resistance during letermovir prophylaxis (2023) (0)
- Phenotypic and Genotypic Antiviral Resistance Testing of HSV-1 Causing Recurrent Cutaneous Lesions in a Patient with DOCK8 Deficiency (2019) (0)
- Diminished Humoral and Cellular Responses to SARS-CoV-2 Vaccines in Patients with Chronic Lymphocytic Leukemia (2022) (0)
- Sentinel Surveillance System Implementation and Evaluation for SARS-CoV-2 Genomic Data, Washington, USA, 2020–2021 (2023) (0)
- Nebulized fusion inhibitory peptide protects cynomolgus macaques from measles virus infection (2022) (0)
- Statistical Challenges when Analyzing SARS-CoV-2 RNA Measurements Below the Assay Limit of Quantification in COVID-19 Clinical Trials (2023) (0)
- High-resolution profiling of human cytomegalovirus cell-free DNA in human plasma highlights its exceptionally fragmented nature (2020) (0)
- Nebulized fusion inhibitory peptide protects cynomolgus macaques from measles virus infection (2022) (0)
- Why get tested? Linking Intentions for Seeking SARS-CoV-2 Testing with RT-PCR Results and Cycle Threshold Values at Community Testing Sites (2021) (0)
- Clinical metagenomic identification of Balamuthia mandrillaris encephalitis and assembly of the draft genome: the continuing case for reference genome sequencing (2015) (0)
- Self-Assessed Severity as a Determinant of Coronavirus Disease 2019 Symptom Specificity: A Longitudinal Cohort Study (2022) (0)
- The Impact of B-Cell-Directed Therapy on Sars-Cov-2 Vaccine Efficacy in CLL: 1-Year Follow up (2022) (0)
- Reinfection with SARS-CoV-2 and Waning Humoral Immunity: A Case Report (2022) (0)
- Genomics and Proteomics of Picornaviruses (2013) (0)
- 631. CMV Reactivation in Hematopoietic Cell Transplant Candidates: A Novel Risk Factor for Post-transplant Reactivation (2022) (0)
- Herpes simplex virus lymphadenitis is associated with tumor reduction in a patient with chronic lymphocytic leukemia (2022) (0)
- Surveillance of Vermont wildlife in 2021-2022 reveals no detected SARS-CoV-2 viral RNA (2023) (0)
- CrAssphage and its bacterial host in cat feces (2021) (0)
- Genomic Characterization of Respiratory Syncytial Virus during 2022–23 Outbreak, Washington, USA (2023) (0)
- 1149. Resistance Analyses of Patient Viral Samples from the Remdesivir Phase 3 Adaptive COVID-19 Treatment Trial-1 (ACTT-1) (2022) (0)
- Comparative genomic, transcriptomic, and proteomic reannotation of human herpesvirus 6 (2018) (0)
- Validation and Implementation of CLIA-Compliant Whole Genome Sequencing (WGS) in Public Health Laboratory (2017) (0)
- Cell free DNA from respiratory pathogens is detectable in the blood plasma of Cystic Fibrosis patients (2020) (0)
- Variants in nucleocapsid protein and endoRNase are found to associate with severe COVID-19 in a case-control study in Washington State, USA (2021) (0)
- Isolation and characterization of the fall Chinook aquareovirus (2017) (0)
- Using time‐weighted average change from baseline of SARS‐CoV‐2 viral load to assess impact of hydroxychloroquine as postexposure prophylaxis and early treatment for COVID‐19 (2022) (0)
- Occurrence and Timing of Subsequent Severe Acute Respiratory Syndrome Coronavirus 2 Reverse-transcription Polymerase Chain Reaction Positivity Among Initially Negative Patients. (2021) (0)
- Subnanometer structure of an enveloped virus fusion complex on viral surface reveals new entry mechanisms (2023) (0)
- Pre-Procedural Surveillance Testing for SARS-CoV-2 in an Asymptomatic Population Shows Low Rates of Positivity (2020) (0)
- Longitudinal accumulation of in vivo and in vitro-grown Treponema pallidum subsp. pallidum TprK variants in the presence and absence of immune pressure (2021) (0)
- Standard Issue: Copy number heterogeneity of JC virus standards discovered through next-generation sequencing (2016) (0)
- Viral genetics modulate orolabial HSV-1 shedding in humans. (2018) (0)
- 789. Viral and Immunologic biomarkers of COVID-19 improve risk stratification and identify patients most likely to benefit from therapy with remdesivir (2022) (0)
- 307. Diagnostic Test Kinetics, Infectivity, and Immunological Responses Among Unvaccinated Adults During Acute SARS-CoV-2 Infection (2022) (0)
- 1734. Cytokine Levels in Bronchoalveolar Lavage Fluid of Rhinovirus-Infected Hematopoietic Cell Transplant Recipients: Associations With Mortality (2018) (0)
- Towards Discovering SARS-CoV-2 Variants of High Consequence Based on Both Surveillance and Electronically Captured Health Data: First Year Experience in Washington State (January 2020-2021) (2021) (0)
- Convergence of immune escape strategies highlights plasticity of SARS-CoV-2 spike (2022) (0)
- 1958. Longitudinal SARS-COV-2 anti-spike antibody response in pregnant people with natural infection and variable vaccine uptake (2022) (0)
- Oral Ixazomib in Untreated Follicular Lymphoma Permits COVID-19 Vaccine Response and Its Efficacy Is Associated with Clinical Factors and Gene Expression Signatures (2021) (0)
- Continued in vitro cefazolin susceptibility in methicillin-susceptible Staphylococcus aureus (2018) (0)
- Orally efficacious broad-spectrum allosteric inhibitor of paramyxovirus polymerase (2020) (0)
- Myeloablation-associated deletion of ORF4 in a human coronavirus 229E infection (2017) (0)
- Validation of SARS-CoV-2 detection across multiple specimen types. (2020) (0)
- CLEP_A_335494 115..125 (2022) (0)
- Sensitivity of Rapid Antigen Tests Against SARS-CoV-2 Omicron and Delta Variants (2023) (0)
- Treponema pallidum subsp. pallidum with an Artificially Impaired TprK Antigenic Variation System is Attenuated in the Rabbit Model of Syphilis (2023) (0)
- Host–pathogen dynamics in longitudinal clinical specimens from patients with COVID-19 (2022) (0)
- COVID-19 Antigen Results Correlate with the Quantity of Replication-Competent SARS-CoV-2 in a Cross-Sectional Study of Ambulatory Adults during the Delta Wave (2023) (0)
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