Alexander Zelikovsky
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Computer Science
Alexander Zelikovsky's Degrees
- PhD Computer Science University of Maryland, College Park
- Masters Computer Science University of Maryland, College Park
- Bachelors Computer Science University of Maryland, College Park
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Why Is Alexander Zelikovsky Influential?
(Suggest an Edit or Addition)According to Wikipedia, Alexander Zelikovsky is a professor of computer science at Georgia State University. He is known for an approximation algorithm for the minimum Steiner tree problem with an approximation ratio 1.55, widely cited by his peers and also widely held in libraries.
Alexander Zelikovsky's Published Works
Published Works
- Improved Steiner tree approximation in graphs (2000) (617)
- Eleven grand challenges in single-cell data science (2020) (553)
- Tighter Bounds for Graph Steiner Tree Approximation (2005) (317)
- An 11/6-approximation algorithm for the network steiner problem (1993) (264)
- Power efficient monitoring management in sensor networks (2004) (233)
- Estimation of alternative splicing isoform frequencies from RNA-Seq data (2010) (215)
- New Approximation Algorithms for the Steiner Tree Problems (1997) (208)
- Selecting Forwarding Neighbors in Wireless Ad Hoc Networks (2001) (185)
- Network Lifetime and Power Assignment in ad hoc Wireless Networks (2003) (151)
- Inferring viral quasispecies spectra from 454 pyrosequencing reads (2011) (120)
- Symmetric Connectivity with Minimum Power Consumption in Radio Networks (2002) (120)
- On wirelength estimations for row-based placement (1998) (116)
- A series of approximation algorithms for the acyclic directed steiner tree problem (1997) (115)
- Better approximation bounds for the network and Euclidean Steiner tree problems (1996) (114)
- Filling algorithms and analyses for layout density control (1999) (113)
- Efficient error correction for next-generation sequencing of viral amplicons (2012) (107)
- EFFICIENT ENERGY MANAGEMENT IN SENSOR NETWORKS (2004) (100)
- Maximum Lifetime of Sensor Networks with Adjustable Sensing Range (2006) (97)
- Systematic benchmarking of omics computational tools (2019) (97)
- Highly scalable algorithms for rectilinear and octilinear Steiner trees (2003) (88)
- Power Efficient Range Assignment for Symmetric Connectivity in Static Ad Hoc Wireless Networks (2006) (88)
- Optimization of linear placements for wirelength minimization with free sites (1999) (85)
- Power efficient range assignment in ad-hoc wireless networks (2003) (80)
- The moving-target traveling salesman problem (2003) (78)
- An improved approximation scheme for the Group Steiner Problem (2001) (72)
- Energy efficiency of load balancing in MANET routing protocols (2005) (71)
- A Faster Approximation Algorithm for the Steiner Tree Problem in Graphs (1993) (66)
- A Novel Method for Signal Transduction Network Inference from Indirect Experimental Evidence (2007) (63)
- Area fill synthesis for uniform layout density (2002) (61)
- Approximating dense cases of covering problems (1996) (60)
- Bioinformatics Algorithms: Techniques and Applications (2008) (57)
- Bootstrap-based differential gene expression analysis for RNA-Seq data with and without replicates (2014) (54)
- Accurate viral population assembly from ultra-deep sequencing data (2014) (52)
- Practical iterated fill synthesis for CMP uniformity (2000) (51)
- HCV Quasispecies Assembly Using Network Flows (2008) (50)
- MLR-tagging: informative SNP selection for unphased genotypes based on multiple linear regression (2006) (49)
- 2SNP: scalable phasing based on 2-SNP haplotypes (2006) (49)
- Provably good routing tree construction with multi-port terminals (1997) (49)
- Filling and slotting: analysis and algorithms (1997) (49)
- QUENTIN: reconstruction of disease transmissions from viral quasispecies genomic data (2018) (46)
- ScaffMatch: Scaffolding Algorithm Based on Maximum Weight Matching (2015) (44)
- Provably good global buffering using an available buffer block plan (2000) (44)
- Technology dictates algorithms: recent developments in read alignment (2020) (44)
- Multiobjective Games and Determining Pareto-Nash Equilibria (2005) (42)
- Profiling immunoglobulin repertoires across multiple human tissues using RNA sequencing (2017) (39)
- The Polymatroid Steiner Problems (2004) (38)
- Monte-Carlo algorithms for layout density control (2000) (38)
- Optimal phase conflict removal for layout of dark field alternating phase shifting masks (1999) (37)
- DEEPS: Deterministic Energy-Efficient Protocol for Sensor networks (2006) (37)
- Fast bootstrapping‐based estimation of confidence intervals of expression levels and differential expression from RNA‐Seq data (2017) (36)
- A note on the MST heuristic for bounded edge-length Steiner trees with minimum number of Steiner points (2000) (35)
- New graph bipartizations for double-exposure, bright field alternating phase-shift mask layout (2001) (35)
- Informative SNP Selection Methods Based on SNP Prediction (2007) (33)
- Node caching enhancement of reactive ad hoc routing protocols [MANET] (2005) (33)
- Combinatorial Search Methods for Multi-SNP Disease Association (2006) (32)
- Reconstruction of viral population structure from next-generation sequencing data using multicommodity flows (2013) (32)
- Fast yield-driven fracture for variable shaped beam mask writing (2006) (31)
- An Approximation Algorithm for the Bandwidth Problem on Dense Graphs (1997) (30)
- SyD: A Middleware Testbed for Collaborative Applications over Small Heterogeneous Devices and Data Stores (2004) (30)
- Multi-project reticle floorplanning and wafer dicing (2004) (28)
- Accurate assembly of minority viral haplotypes from next-generation sequencing through efficient noise reduction (2020) (27)
- Closing the smoothness and uniformity gap in area fill synthesis (2002) (27)
- Evaluation of placement techniques for DNA probe array layout (2003) (27)
- New and exact filling algorithms for layout density control (1999) (26)
- Automated layout and phase assignment techniques for dark-field alternating PSM (1998) (25)
- Border Length Minimization in DNA Array Design (2002) (25)
- Yield- and cost-driven fracturing for variable shaped-beam mask writing (2004) (25)
- Computing and Combinatorics (2016) (25)
- Global transmission network of SARS-CoV-2: from outbreak to pandemic (2020) (25)
- Epidemiological data analysis of viral quasispecies in the next-generation sequencing era (2020) (25)
- Reconstructing viral quasispecies from NGS amplicon reads (2012) (24)
- Hierarchical dummy fill for process uniformity (2001) (24)
- Massive hemoptysis complicating Behçet's syndrome: the importance of early pulmonary angiography and operation. (1988) (24)
- Moving-Target TSP and Related Problems (1998) (24)
- MetNetAligner: a web service tool for metabolic network alignments (2009) (24)
- An 11/6-Approximation Algorithm for the Steiner Problem on Graphs (1992) (23)
- Searching High-Order SNP Combinations for Complex Diseases Based on Energy Distribution Difference (2015) (23)
- Approaching the 5/4-Approximation for Rectilinear Steiner Trees (1994) (23)
- Inference of genetic relatedness between viral quasispecies from sequencing data (2017) (23)
- Minimum buffered routing with bounded capacitive load for slew rate and reliability control (2003) (23)
- Engineering a scalable placement heuristic for DNA probe arrays (2003) (22)
- CliqueSNV: Scalable Reconstruction of Intra-Host Viral Populations from NGS Reads (2018) (21)
- Linear Reduction for Haplotype Inference (2004) (21)
- Tag SNP Selection Based on Multivariate Linear Regression (2006) (21)
- Combinatorial Methods for Disease Association Search and Susceptibility Prediction (2006) (20)
- On the skew-bounded minimum-buffer routing tree problem (2003) (20)
- Linear reduction method for predictive and informative tag SNP selection (2005) (20)
- Provably good global buffering by multi-terminal multicommodity flow approximation (2001) (20)
- Faster Approximation Algorithms for the Rectilinear Steiner Tree Problem (1993) (19)
- Viral quasispecies reconstruction from amplicon 454 pyrosequencing reads (2011) (19)
- Long single-molecule reads can resolve the complexity of the Influenza virus composed of rare, closely related mutant variants (2016) (19)
- Transcriptome assembly and quantification from Ion Torrent RNA-Seq data (2013) (19)
- Linear reduction methods for tag SNP selection (2004) (19)
- Minimum Steiner Tree Construction (2008) (19)
- A New Approximation Algorithm for Finding Heavy Planar Subgraphs (2003) (18)
- Fast and Efficient Bright-Field AAPSM Conflict Detection and Correction (2007) (18)
- Provably good global buffering by multiterminal multicommodity flow approximation (2001) (18)
- Improved Approximation Algorithms for the Quality of Service Multicast Tree Problem (2005) (18)
- Floorplan evaluation with timing-driven global wireplanning, pin assignment, and buffer/wire sizing (2002) (17)
- Transactions on Computational Systems Biology II (2005) (17)
- Benchmarking of computational error-correction methods for next-generation sequencing data (2020) (16)
- Minimum-buffered routing of non-critical nets for slew rate and reliability control (2001) (16)
- Association testing by haplotype-sharing methods applicable to whole-genome analysis (2007) (16)
- Unlocking capacities of genomics for the COVID-19 response and future pandemics (2022) (16)
- Energy Efficient Node Caching and Load Balancing Enhancement of Reactive Ad Hoc Routing Protocols (2007) (16)
- Fast Alignments of Metabolic Networks (2008) (15)
- Optimal Testing of Digital Microfluidic Biochips (2011) (15)
- Optimal phase conflict removal for layout of dark field alternatingphase shifting masks (2000) (15)
- CliqueSNV: An Efficient Noise Reduction Technique for Accurate Assembly of ViralVariants from NGS Data (2020) (14)
- 2SNP: Scalable Phasing Method for Trios and Unrelated Individuals (2008) (14)
- 1.25-Approximation Algorithm for Steiner Tree Problem with Distances 1 and 2 (2009) (14)
- Improved approximation bounds for the group Steiner problem (1998) (14)
- Provably good global buffering by generalized multiterminalmulticommodity flow approximation (2002) (14)
- Design and Validation of Methods Searching for Risk Factors in Genotype Case-Control Studies (2008) (13)
- A Combinatorial Method for Predicting Genetic Susceptibility to Complex Diseases (2005) (13)
- Energy-efficient continuous and event-driven monitoring (2005) (13)
- Homomorphisms of Multisource Trees into Networks with Applications to Metabolic Pathways (2007) (13)
- Genotype susceptibility and integrated risk factors for complex diseases (2006) (12)
- Bright-field AAPSM conflict detection and correction (2005) (12)
- 12 Grand Challenges in Single-Cell Data Science (2019) (12)
- Mobile Fleet Application using Soap and System on Devices (SYD) Middleware Technologies (2002) (12)
- Antibody Response to Lyme Disease Spirochetes in the Context of VlsE-Mediated Immune Evasion (2016) (12)
- Computer-Aided Optimization of DNA Array Design and Manufacturing (2006) (12)
- Computational framework for next-generation sequencing of heterogeneous viral populations using combinatorial pooling (2015) (12)
- Scalable Heuristics for Design of DNA Probe Arrays (2004) (12)
- Practical approximation algorithms for zero- and bounded-skew trees (2001) (11)
- Influence of symbiont-produced bioactive natural products on holobiont fitness in the marine bryozoan, Bugula neritina via protein kinase C (PKC) (2016) (11)
- New multilevel and hierarchical algorithms for layout density control (1999) (11)
- Multiple Linear Regression for Index SNP Selection on Unphased Genotypes (2006) (11)
- Repeat‐aware evaluation of scaffolding tools (2018) (11)
- Yield-driven multi-project reticle design and wafer dicing (2005) (11)
- Inferring metabolic pathway activity levels from RNA-Seq data (2016) (11)
- Improved Approximation Algorithms for the Quality of Service Steiner Tree Problem (2003) (10)
- Quantitative differences between intra-host HCV populations from persons with recently established and persistent infections (2020) (10)
- Spanning Closed Trail and Hamiltonian Cycle in Grid Graphs (1995) (10)
- From Alpha to Zeta: Identifying variants and subtypes of SARS-CoV-2 via clustering (2021) (10)
- Mirror-image dextrocardia with situs inversus and coarctation of the aorta. (1974) (10)
- Compressible area fill synthesis (2005) (10)
- ILP-based maximum likelihood genome scaffolding (2014) (10)
- Fill for Shallow Trench Isolation CMP (2006) (10)
- Using earth mover’s distance for viral outbreak investigations (2019) (10)
- HapIso: An Accurate Method for the Haplotype- Specific Isoforms Reconstruction From Long Single-Molecule Reads (2016) (9)
- Efficient Approximate Kernel Based Spike Sequence Classification (2022) (9)
- Severe lymphedema of the arm as a potential cause of shoulder trauma. (2004) (9)
- On Approximation of the Power-p and Bottleneck Steiner Trees (2000) (9)
- Inference of clonal selection in cancer populations using single-cell sequencing data (2018) (9)
- Computational Methods for Next Generation Sequencing Data Analysis (2016) (9)
- SEARCH FOR MULTI-SNP DISEASE ASSOCIATION (2006) (9)
- Haplotype tagging using support vector machines (2006) (9)
- Combinatorial Optimization Algorithms for Metabolic Networks Alignments and Their Applications (2011) (8)
- Hybrid SVM kernels for protein secondary structure prediction (2006) (8)
- Phasing and Missing Data Recovery in Family Trios (2005) (8)
- New approximation algorithms for routing with multiport terminals (2000) (8)
- Efficient Alignments of Metabolic Networks with Bounded Treewidth (2010) (8)
- Clustering Based Identification of SARS-CoV-2 Subtypes (2020) (8)
- Improved transcriptome quantification and reconstruction from RNA-Seq reads using partial annotations (2012) (8)
- The associative-skew clock routing problem (1999) (8)
- Evaluation of the new OASIS format for layout fill compression (2004) (8)
- Computational Approaches to Detect Illicit Drug Ads and Find Vendor Communities Within Social Media Platforms (2020) (7)
- Primal-dual algorithms for QoS multimedia multicast (2003) (7)
- RNA-Seq based discovery and reconstruction of unannotated transcripts in partially annotated genomes (2011) (7)
- kGEM: An EM-based algorithm for local reconstruction of viral quasispecies (2013) (7)
- Identification of Surface Epitopes Associated with Protection against Highly Immune-Evasive VlsE-Expressing Lyme Disease Spirochetes (2018) (7)
- Distributed Algorithms for TDMA Link Scheduling in Sensor Networks (2012) (7)
- Applications of the Linear Matroid Parity Algorithm to Approximating Steiner Trees (2006) (7)
- The T-join Problem in Sparse Graphs: Applications to Phase Assignment Problem in VLSI Mask Layout (1999) (7)
- 1.757 and 1.267 - Approximation Algorithms for the Network and Rectilinear Steiner Tree Problems (1994) (6)
- An approximation algorithm for weighted itk-polymatroids and the Steiner tree problem in graphs (1993) (6)
- Collaborative Topology Control for Lifetime Maximization (2011) (6)
- VGA: A method for viral quasispecies assembly from ultra-deep sequencing data (2014) (6)
- Toward an easy programming environment for implementing mobile applications: a fleet application case study using SyD middleware (2003) (6)
- Applications of the Matroid Parity Problem to Approximating Steiner Trees (1998) (6)
- Identification of cancer-specific motifs in mimotope profiles of serum antibody repertoire (2015) (6)
- GaussianCpG: a Gaussian model for detection of CpG island in human genome sequences (2017) (6)
- Rejection of a Gelatin-Impregnated Dacron Graft (1993) (6)
- Scalable genome scaffolding using integer linear programming (2012) (5)
- Mean Square Residue Biclustering with Missing Data and Row Inversions (2009) (5)
- Automated quality control for a molecular surveillance system (2018) (5)
- Maximum Likelihood Estimation of Incomplete Genomic Spectrum from HTS Data (2011) (5)
- Analysis of heterogeneous genomic samples using image normalization and machine learning (2019) (5)
- Combinatorial Analysis of Disease Association and Susceptibility for Rheumatoid Arthritis SNP Data (2006) (5)
- Design flow enhancements for DNA arrays (2003) (5)
- Thromboangiitis Obliterans in a Woman Report of a Case (1973) (5)
- Enhanced Design Flow and Optimizations for Multiproject Wafers (2007) (5)
- A faster 11/6-approximation algorithm for the Steiner tree problem in graphs (1992) (5)
- Sensory nerves impede the formation of tertiary lymphoid structures and development of protective anti-melanoma immune responses. (2022) (4)
- Metabolic Analysis of Metatranscriptomic Data from Planktonic Communities (2017) (4)
- Family trio phasing and missing data recovery (2005) (4)
- GaussianCpG: A Gaussian model for detection of human CpG island (2015) (4)
- Fast estimation of genetic relatedness between members of heterogeneous populations of closely related genomic variants (2018) (4)
- Phasing of 2-SNP Genotypes Based on Non-random Mating Model (2006) (4)
- Monte-Carlo methods for chemical-mechanical planarization on multiple-layer and dual-material models (2002) (4)
- QoS Multimedia Multicast Routing (2007) (4)
- Practical Approximations of Steiner Trees in Uniform Orientation Metrics (2018) (4)
- Area fill generation with inherent data volume reduction (2003) (4)
- SILP3: Maximum likelihood approach to scaffolding (2014) (4)
- Assessment of HCV infection stage as recent or chronic using multi-parameter analysis and machine learning (2017) (4)
- Discrete Methods for Association Search and Status Prediction in Genotype Case-Control Studies (2007) (4)
- A clinical trial with pyridinolcarbamate in the treatment of patients with obstructive diseases of the peripheral arteries. (1973) (4)
- Error Correction of NGS Reads from Viral Populations (2016) (4)
- Consolidating software tools for DNA microarray design and manufacturing (2004) (4)
- Solving scaffolding problem with repeats (2018) (3)
- New Zealand White Rabbits Effectively Clear Borrelia burgdorferi B31 despite the Bacterium’s Functional vlsE Antigenic Variation System (2019) (3)
- Case ( Control )-Free Multi-SNP Combinations in Case-Control Studies (2006) (3)
- Transactions on Computational Systems Biology II (Lecture Notes in Computer Science) (2005) (3)
- k GEM : An Expectation Maximization Error Correction Algorithm for Next Generation Sequencing of Amplicon-based Data (2013) (3)
- Flexible approach for novel transcript reconstruction from RNA-seq data using maximum likelihood integer programming (2013) (3)
- Discrete algorithms for analysis of genotype data (2007) (3)
- Comprar Bioinformatics Algorithms: Techniques and Applications | Ion Mandoiu | 9780470097731 | Wiley (2008) (3)
- Scheduling Bursts Using Interval Graphs in Optical Burst Switching Networks (2009) (3)
- Bootstrap-based differential gene expression analysis for RNA-Seq data without replicates (2014) (3)
- Optimizing pooling strategies for the massive next-generation sequencing of viral samples (2013) (3)
- TRIP: a method for novel transcript reconstruction from paired-end RNA-seq reads (2012) (3)
- Multi-project reticle design and wafer dicing under uncertain demand (2006) (3)
- Bottleneck Steiner Tree Problems (2009) (3)
- Inference of mutability landscapes of tumors from single cell sequencing data (2020) (3)
- Risk Factor Searching Heuristics for SNP Case-Control Studies (2007) (3)
- Integrated Design Flow for Universal DNA Tag Arrays (2005) (3)
- [Traumatic common carotid-internal jugular fistula: positive aspect]. (1997) (3)
- Bioinformatics Research and Applications (2016) (2)
- Predicting Opioid Epidemic by Using Twitter Data (2018) (2)
- Optimization Methods for Genotype Data Analysis in Epidemiological Studies (2007) (2)
- A Polynomial Time Subpolynom-Approximation Scheme for the Acyclic Directed Steiner Tree Problem (1994) (2)
- Delineating Surface Epitopes of Lyme Disease Pathogen Targeted by Highly Protective Antibodies of New Zealand White Rabbits (2019) (2)
- Genotype Tagging with Limited Overfitting (2009) (2)
- Practical Approximation Algorithms for Separable Packing Linear Programs (2001) (2)
- Improved Approximation Bounds for the Rectilinear Steiner Tree Problem (1994) (2)
- HapIso: An Accurate Method for the Haplotype- Specific Isoforms Reconstruction From Long Single-Molecule Reads. (2017) (2)
- Benchmarking of computational error-correction methods for next-generation sequencing via unique molecular identifiers (2019) (2)
- Classification of HCV infections through sequence image normalization (2017) (2)
- Modeling the Spread of HIV and HCV Infections Based on Identification and Characterization of High-Risk Communities Using Social Media (2017) (2)
- Minimum base of weighted k polymatroid and Steiner tree problem (1992) (2)
- Minimum Steiner Tree Construction. (2008) (2)
- Treatment of lymphedema with multicompartmental pneumatic device. (1990) (2)
- Multicommodity Flow Algorithms for Buffered Global Routing (2005) (2)
- HapIso: An Accurate Method for the Haplotype-Specific Isoforms Reconstruction from Long Single-Molecule Reads (2016) (2)
- Workshop: Novel transcript reconstruction from paired-end RNA-Seq reads using fragment length distribution (2012) (2)
- Deterministic regression algorithm for transcriptome frequency estimation (2014) (2)
- Detection of genetic relatedness between viral samples using EM-based clustering of next-generation sequencing data (2014) (2)
- Towards reproducible, transparent, and systematic benchmarking of omics computational tools (2018) (2)
- A Study of Optimal Cost-Skew Tradeoff and Remaining Suboptimality in Interconnect Tree Constructions (2018) (2)
- Scalable Reconstruction of SARS-CoV-2 Phylogeny with Recurrent Mutations (2021) (1)
- Efficient error correction for next-generation sequencing of viral amplicons (2012) (1)
- Viral quasispecies reconstruction using next generation sequencing reads (2013) (1)
- Further improvements of Steiner tree approximations (1994) (1)
- Computing and combinatorics : 20th international conference, COCOON 2014, Atlanta, GA, USA, August 4-6, 2014 : proceedings (2014) (1)
- Eleven grand challenges in single-cell data science (2020) (1)
- Accurate differential gene expression analysis for RNA-Seq data without replicates (2013) (1)
- [A new endovascular simulator]. (1998) (1)
- Reconstruction of viral population structure from next-generation sequencing data using multicommodity flows (2013) (1)
- Reconstruction of Infectious Bronchitis Virus Quasispecies from NGS Data (2016) (1)
- ILP-based maximum likelihood genome scaffolding (2014) (1)
- Metabolic pathway activity estimation from RNA-Seq data (2015) (1)
- Algorithms for prediction of viral transmission using analysis of intra-host viral populations (2015) (1)
- Routing Using Messengers in Sparse and Disconnected Mobile Sensor Networks (2006) (1)
- Author Correction: Profiling immunoglobulin repertoires across multiple human tissues using RNA sequencing (2020) (1)
- 2SNV: Quasispecies reconstruction from PacBio reads (2015) (1)
- Detecting Illicit Drug Ads in Google+ Using Machine Learning (2019) (1)
- A 3/2-Approximation Algorithm for Generalized Steiner Trees in Complete Graphs with Edge Lengths 1 and 2 (2010) (1)
- Introduction to the Special Section on Computational Nanobioscience (2007) (1)
- Pipeline for Analyzing Activity of Metabolic Pathways in Planktonic Communities Using Metatranscriptomic Data (2021) (1)
- Workshop: Bioinformatics methods for reconstruction of Infectious Bronchitis Virus quasispecies from next generation sequencing data (2012) (1)
- Auctions with Buyer Preferences (2002) (1)
- Reconstruction of influenza a virus variants from PacBio reads (2014) (1)
- Poster: ViSpA: Viral spectrum assembling method (2011) (1)
- Unlocking capacities of viral genomics for the COVID-19 pandemic response (2021) (1)
- Influence of symbiont-produced bioactive natural products on holobiont fitness in the marine bryozoan, Bugula neritina via protein kinase C (PKC) (2016) (1)
- Pooling Strategy for Massive Viral Sequencing (2016) (1)
- 1.25 Approximation Algorithm for the Steiner Tree Problem with Distances One and Two (2008) (1)
- Preface: 14th International Symposium on Bioinformatics Research and Applications (ISBRA 2018) (2019) (1)
- Monte-Carlo Regression algorithm for isoform frequency estimation from RNA-Seq data (2013) (1)
- An Approximation Scheme For The Group Steiner Tree Problem (1997) (1)
- Bioinformatics Research and Applications, Third International Symposium, ISBRA 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings (2007) (1)
- A Factor 3/2 Approximation for Generalized Steiner Tree Problem with Distances One and Two (2008) (1)
- Orchestrating Supply Chain Opportunities: Achieving Stretch Goals, Efficiently (2011) (1)
- Poster: Scaffolding draft genomes using paired sequencing data (2011) (1)
- Bioinformatics Research and Applications, Fourth International Symposium, ISBRA 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings (2008) (1)
- Transcriptome Quantification and Differential Expression from NGS Data (2016) (1)
- TRIP: a method for novel transcript reconstruction from paired-end RNA-seq reads (2012) (1)
- Benchmarking of computational error-correction methods for next-generation sequencing data (2020) (1)
- Viral Quasispecies Reconstruction Based on Unassembled Frequency Estimation (2011) (1)
- Prevention of heel pressure sores with a simple pneumatic device (1985) (1)
- Maximum Series-Parallel Subgraph (2011) (0)
- GaussianCpG: a Gaussian model for detection of CpG island in human genome sequences (2017) (0)
- Guest Editors' Introduction to the Special Section on Bioinformatics Research and Applications (2007) (0)
- Bootstrap-based differential gene expression analysis for RNA-Seq data with and without replicates (2014) (0)
- Multi-Commodity Flow Methods for Quasispecies Spectrum Reconstruction Given Amplicon Reads (2012) (0)
- Preface Special Issue: 15th International Symposium on Bioinformatics Research and Applications (ISBRA 2019) (2020) (0)
- Selected Papers from the 1st ACIS International Workshop on Self-Assembling Wireless Networks (2007) (0)
- Guest Editors' Introduction to the Special Section on Bioinformatics Research and Applications (2011) (0)
- AUCTIONSWITH BUYER PREFERENCES (0)
- Wiley Series on Bioinformatics: Computational Techniques and Engineering (2008) (0)
- Special Issue: 10th International Computational Advances in Bio and Medical Sciences (ICCABS 2020) (2021) (0)
- Inference of genetic relatedness between viral quasispecies from sequencing data (2017) (0)
- Estimation of viral population structure from amplicon-based reads (2013) (0)
- Gene expression Fast bootstrapping-based estimation of confidence intervals of expression levels and differential expression from RNA-Seq data (2017) (0)
- Repeat aware evaluation of scaffolding tools (2017) (0)
- Message from the conference and the workshop chairs (2007) (0)
- Special Issue: 11th International Computational Advances in Bio and Medical Sciences (ICCABS 2021). (2023) (0)
- Workshop: A maximum likelihood method for quasispecies spectrum assembly (2012) (0)
- Accurate reconstruction of transmission history using analysis of deep sequencing data for intra-host viral populations (2016) (0)
- Systematic benchmarking of omics computational tools (2019) (0)
- Prediction of genetic susceptibility to complex diseases (2006) (0)
- [Catheter embolization into the heart]. (1974) (0)
- Technology dictates algorithms: recent developments in read alignment (2021) (0)
- GKM over large MANET (2005) (0)
- BDCloud-SocialCom-SustainCom 2016: Welcome message from the conference and program chairs (2016) (0)
- Message from the Poster Chairs (2007) (0)
- Mapping and Filling Metabolic Pathway Holes (2015) (0)
- 17th International Symposium on Bioinformatics Research and Applications (ISBRA 2021) (2022) (0)
- Fast estimation of genetic relatedness between members of heterogeneous populations of closely related genomic variants (2018) (0)
- Poster: Accurate scaffolding of large genomes using integer programming and Non-Serial Dynamic Programming (2012) (0)
- A note on the colorability of mixed hypergraph using k colors (2002) (0)
- Efficient filtering algorithm for detection of genetic similarity between large genomic datasets (2017) (0)
- Improved Approximations of Maximum Planar Subgraph (1996) (0)
- Identifying Biomarkers Using Support Vector Machine to Understand the Racial Disparity in Triple-Negative Breast Cancer. (2023) (0)
- Reference assisted nucleic acid sequence reconstruction from mass spectrometry data (2013) (0)
- Combinatorial Optimization and Applications (2018) (0)
- Traversing Probabilistic (1999) (0)
- Community structure and temporal dynamics of SARS-CoV-2 epistatic network allows for early detection of emerging variants with altered phenotypes (2023) (0)
- Guest Editors' Introduction to the Special Section on Bioinformatics Research and Applications (2012) (0)
- Algorithms for computational genetic epidemiology (2006) (0)
- Consolidating Software for DNA Microarray Design and Manufacturing * (2004) (0)
- WS-GraphMatching: a web service tool for graph matching (2010) (0)
- Applications of High-Fidelity Sequencing Protocol to RNA Viruses (2016) (0)
- Network Mapping of Metabolic Pathways (2009) (0)
- Special issue on Computing and Combinatorics Conference (2016) (0)
- Prediction Methods for Inherited Disease (2005) (0)
- Special IssuePreface: 13th International Symposium on BioinformaticsResearch and Applications (ISBRA 2017) (2018) (0)
- Improved Approximation Algorithms for the Quality of Service Multicast Tree Problem1 (0)
- Agent-Based in Silico Evolution of HCV Quasispecies (2017) (0)
- Greedy Approach to Reliable Disease Susceptibility Prediction (2007) (0)
- Automated quality control for a molecular surveillance system (2018) (0)
- Guest Editors' Introduction to the Special Section on Bioinformatics Research and Applications (2013) (0)
- Alignment of DNA Mass-Spectral Profiles Using Network Flows (2013) (0)
- Special Issue: 16th International Symposium on Bioinformatics Research and Applications (ISBRA 2020) (2021) (0)
- Poster: Haplotype discovery from high-throughput sequencing data (2011) (0)
- Computing and Combinatorics (2014) (0)
- Linear Algebraic Tag SNP Selection and Haplotype Reconstruction (2005) (0)
- Fixed-Parameter Tractable Combinatorial Algorithms for Metabolic Networks Alignments (2010) (0)
- The last achievements in Steiner tree approximations (1993) (0)
- Computational Advances in Bio and Medical Sciences: 9th International Conference, ICCABS 2019, Miami, FL, USA, November 15–17, 2019, Revised Selected Papers (2020) (0)
- Computing and Combinatorics (2016) (0)
- [Lumbar sympathectomy for venostatic leg ulcer]. (1984) (0)
- Cad tools for dna micro-array design, manufacture and application (2006) (0)
- Inferring metabolic pathway activity levels from RNA-Seq data (2016) (0)
- Special Issue: 16th International Symposium on Bioinformatics Research and Applications (ISBRA 2020) (2021) (0)
- [Mirror image dextrocardia with situs inversus and coarctation]. (1974) (0)
- Guest Editors' Introduction to the Special Section on Bioinformatics Research and Applications (2009) (0)
- Special Issue: 9th International Computational Advances in Bio and Medical Sciences (ICCABS 2019) (2021) (0)
- CAME 2017: 6th Workshop on Computational Advances in Molecular Epidemiology (2017) (0)
- Comparative transcriptome analysis of Peromyscus leucopus and C3H mice infected with the Lyme disease pathogen (2023) (0)
- Entropy Based Clustering of Viral Sequences (2022) (0)
- Using Random Peptide Phage Display Libraries for early Breast cancer detection (2013) (0)
- Unlocking capacities of viral genomics for the COVID-19 pandemic response (2021) (0)
- Workshop on Computational Advances in Molecular Epidemiology (2019) (0)
- Profiling immunoglobulin repertoires across multiple human tissues using RNA sequencing (2020) (0)
- Mapping and Filling Metabolic Pathways (2007) (0)
- ACM-BCB 2018 Computational Advances in Molecular Epidemiology (CAME) Chairs' Welcome (2018) (0)
- A New Approach to Approximation of Steiner Trees (1995) (0)
- A Novel Network Representation of SARS-CoV-2 Sequencing Data (2021) (0)
- Combinatorial Optimization and Applications (2009) (0)
- Estimating Enzyme Participation in Metabolic Pathways for Microbial Communities from RNA-seq Data (2020) (0)
- ILP Methods for Family Trio Phasing (2006) (0)
- Abstract LB-214: Imputation of single cell cancer genotypes (2019) (0)
- INFERRING THE STRUCTURE OF SIGNAL TRANSDUCTION NETWORKS FROM INTERACTIONS BETWEEN CELLULAR COMPONENTS AND INFERRING HAPLOTYPES FROM INFORMATIVE SNPS by KELLY WESTBROOKS Under the Direction of (2006) (0)
- Guest Editors’ Introduction to the Special Section on Bioinformatics Research and Applications (2019) (0)
- Guest Editors' Introduction to the Special Section on Bioinformatics Research and Applications (2007) (0)
- Cross Haplotype Sharing Statistic : Haplotype length based method for whole genome association testing (2006) (0)
- Invited: Metabolic network alignments (2011) (0)
- [Endovascular graft for treatment of vascular disease]. (1998) (0)
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