Alkes Price
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American statistical geneticist
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Alkes Price's Degrees
- PhD Biostatistics University of Washington
- Masters Biostatistics University of Washington
- Bachelors Mathematics University of Washington
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Why Is Alkes Price Influential?
(Suggest an Edit or Addition)According to Wikipedia, Alkes Long Price is an American statistical geneticist. He is Professor of Statistical Genetics in the Department of Epidemiology at the Harvard School of Public Health , where he also holds a secondary appointment in the Department of Biostatistics. In addition, he is an associate member of the Broad Institute's Program in Medical and Population Genetics and a member of the HSPH Program in Quantitative Genomics. In 2017, he received the Outstanding Faculty Mentor of the Year Award from the Harvard School of Public Health.
Alkes Price's Published Works
Number of citations in a given year to any of this author's works
Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- Principal components analysis corrects for stratification in genome-wide association studies (2006) (8994)
- Biological Insights From 108 Schizophrenia-Associated Genetic Loci (2014) (6445)
- A second generation human haplotype map of over 3.1 million SNPs (2007) (4567)
- Population Structure and Eigenanalysis (2006) (4224)
- LD Score regression distinguishes confounding from polygenicity in genome-wide association studies (2014) (3142)
- Integrating common and rare genetic variation in diverse human populations (2010) (2731)
- An Atlas of Genetic Correlations across Human Diseases and Traits (2015) (2653)
- Defining the role of common variation in the genomic and biological architecture of adult human height (2014) (1805)
- Partitioning heritability by functional annotation using genome-wide association summary statistics (2015) (1615)
- De novo identification of repeat families in large genomes (2005) (1463)
- Reconstructing Indian Population History (2009) (1403)
- Integrative approaches for large-scale transcriptome-wide association studies (2015) (1235)
- A contribution of novel CNVs to schizophrenia from a genome-wide study of 41,321 subjects: CNV Analysis Group and the Schizophrenia Working Group of the Psychiatric Genomics Consortium (2016) (1125)
- Efficient Bayesian mixed model analysis increases association power in large cohorts (2014) (1114)
- New approaches to population stratification in genome-wide association studies (2010) (1079)
- Modeling Linkage Disequilibrium Increases Accuracy of Polygenic Risk Scores. (2015) (858)
- LD Hub: a centralized database and web interface to perform LD score regression that maximizes the potential of summary level GWAS data for SNP heritability and genetic correlation analysis (2016) (775)
- Advantages and pitfalls in the application of mixed-model association methods (2014) (754)
- Contribution of copy number variants to schizophrenia from a genome-wide study of 41,321 subjects (2016) (736)
- Reconstructing Native American Population History (2012) (688)
- Pitfalls of predicting complex traits from SNPs (2013) (612)
- Two independent alleles at 6q23 associated with risk of rheumatoid arthritis (2007) (592)
- Heritability enrichment of specifically expressed genes identifies disease-relevant tissues and cell types (2017) (578)
- Pooled association tests for rare variants in exon-resequencing studies. (2010) (561)
- Leveraging polygenic functional enrichment to improve GWAS power (2017) (556)
- Sensitive Detection of Chromosomal Segments of Distinct Ancestry in Admixed Populations (2009) (518)
- Genomic Dissection of Bipolar Disorder and Schizophrenia, Including 28 Subphenotypes (2017) (517)
- Partitioning heritability of regulatory and cell-type-specific variants across 11 common diseases. (2014) (510)
- Patterns of Cis Regulatory Variation in Diverse Human Populations (2012) (470)
- Mixed-model association for biobank-scale datasets (2018) (429)
- Concept, Design and Implementation of a Cardiovascular Gene-Centric 50 K SNP Array for Large-Scale Genomic Association Studies (2008) (416)
- Estimating and interpreting FST: The impact of rare variants (2013) (416)
- Exome sequencing and the genetic basis of complex traits (2012) (409)
- Integrating Functional Data to Prioritize Causal Variants in Statistical Fine-Mapping Studies (2014) (401)
- Contrasting genetic architectures of schizophrenia and other complex diseases using fast variance components analysis (2015) (397)
- Using Extended Genealogy to Estimate Components of Heritability for 23 Quantitative and Dichotomous Traits (2013) (362)
- Long-range LD can confound genome scans in admixed populations. (2008) (360)
- Genomic analyses identify hundreds of variants associated with age at menarche and support a role for puberty timing in cancer risk (2017) (359)
- Dissecting the genetics of complex traits using summary association statistics (2016) (352)
- COVID-19 tissue atlases reveal SARS-CoV-2 pathology and cellular targets (2021) (347)
- Discerning the Ancestry of European Americans in Genetic Association Studies (2007) (328)
- Transcriptome-wide association study of schizophrenia and chromatin activity yields mechanistic disease insights (2016) (327)
- The landscape of recombination in African Americans (2011) (312)
- Large-scale genomic analyses link reproductive ageing to hypothalamic signaling, breast cancer susceptibility and BRCA1-mediated DNA repair (2015) (308)
- Linkage disequilibrium–dependent architecture of human complex traits shows action of negative selection (2016) (293)
- Pooled Association Tests for Rare Variants in Exon-Resequencing Studies (2010) (291)
- Fast Principal-Component Analysis Reveals Convergent Evolution of ADH1B in Europe and East Asia. (2016) (283)
- A genomewide admixture map for Latino populations. (2007) (282)
- A common MYBPC3 (cardiac myosin binding protein C) variant associated with cardiomyopathies in South Asia (2009) (260)
- Abundant contribution of short tandem repeats to gene expression variation in humans (2015) (260)
- Principal component analysis of genetic data (2008) (253)
- Fast and accurate long-range phasing in a UK Biobank cohort (2015) (243)
- The History of African Gene Flow into Southern Europeans, Levantines, and Jews (2011) (239)
- Distinguishing genetic correlation from causation across 52 diseases and complex traits (2017) (228)
- Extremely low-coverage sequencing and imputation increases power for genome-wide association studies (2012) (217)
- Adjusting for heritable covariates can bias effect estimates in genome-wide association studies. (2015) (201)
- The role of the CD58 locus in multiple sclerosis (2009) (200)
- Whole-genome analysis of Alu repeat elements reveals complex evolutionary history. (2004) (199)
- Transethnic Genetic-Correlation Estimates from Summary Statistics. (2016) (196)
- Genome-wide enhancer maps link risk variants to disease genes (2021) (193)
- Single-Tissue and Cross-Tissue Heritability of Gene Expression Via Identity-by-Descent in Related or Unrelated Individuals (2011) (189)
- Multiethnic polygenic risk scores improve risk prediction in diverse populations (2017) (187)
- Fast and accurate imputation of summary statistics enhances evidence of functional enrichment (2013) (163)
- New approaches to disease mapping in admixed populations (2011) (157)
- Insights about clonal hematopoiesis from 8,342 mosaic chromosomal alterations (2018) (157)
- Progress and promise in understanding the genetic basis of common diseases (2015) (150)
- Finding subtle motifs by branching from sample strings (2003) (145)
- Genome-wide association study of ancestry-specific TB risk in the South African Coloured population. (2014) (144)
- Quantifying genetic effects on disease mediated by assayed gene expression levels (2019) (143)
- Quantitative analysis of population-scale family trees with millions of relatives (2018) (137)
- Polygenicity of complex traits is explained by negative selection (2018) (135)
- Quantifying Missing Heritability at Known GWAS Loci (2013) (127)
- Improved ancestry inference using weights from external reference panels (2013) (126)
- Leveraging molecular quantitative trait loci to understand the genetic architecture of diseases and complex traits (2018) (119)
- Enhanced Statistical Tests for GWAS in Admixed Populations: Assessment using African Americans from CARe and a Breast Cancer Consortium (2011) (117)
- Modeling Linkage Disequilibrium Increases Accuracy of Polygenic Risk Scores (2015) (116)
- Functionally-informed fine-mapping and polygenic localization of complex trait heritability (2019) (108)
- Strong association of socioeconomic status with genetic ancestry in Latinos: implications for admixture studies of type 2 diabetes (2009) (104)
- The Impact of Divergence Time on the Nature of Population Structure: An Example from Iceland (2009) (103)
- Effects of cis and trans Genetic Ancestry on Gene Expression in African Americans (2008) (97)
- Functional architecture of low-frequency variants highlights strength of negative selection across coding and noncoding annotations (2018) (95)
- Complement genes contribute sex-biased vulnerability in diverse illnesses (2020) (92)
- Genome-wide comparison of African-ancestry populations from CARe and other cohorts reveals signals of natural selection. (2011) (88)
- Mixed-model association for biobank-scale datasets (2018) (84)
- Quantification of frequency-dependent genetic architectures in 25 UK Biobank traits reveals action of negative selection (2019) (83)
- Combining evidence of natural selection with association analysis increases power to detect malaria-resistance variants. (2007) (83)
- Improving the trans-ancestry portability of polygenic risk scores by prioritizing variants in predicted cell-type-specific regulatory elements (2020) (82)
- Informed Conditioning on Clinical Covariates Increases Power in Case-Control Association Studies (2012) (81)
- Insights into clonal haematopoiesis from 8,342 mosaic chromosomal alterations (2018) (72)
- Dietary fatty acid intake and prostate cancer survival in Örebro County, Sweden. (2012) (71)
- Using population admixture to help complete maps of the human genome (2013) (68)
- Mixed model with correction for case-control ascertainment increases association power. (2015) (67)
- Shared heritability and functional enrichment across six solid cancers (2018) (67)
- Partitioning heritability by functional category using GWAS summary statistics (2015) (66)
- Application of Ancestry Informative Markers to Association Studies in European Americans (2008) (64)
- Functional Architectures of Local and Distal Regulation of Gene Expression in Multiple Human Tissues. (2017) (61)
- Genome-wide scan of 29,141 African Americans finds no evidence of directional selection since admixture. (2014) (60)
- A Comparison of Ten Polygenic Score Methods for Psychiatric Disorders Applied Across Multiple Cohorts (2020) (60)
- Reconciling S-LDSC and LDAK functional enrichment estimates (2019) (59)
- New data and an old puzzle: the negative association between schizophrenia and rheumatoid arthritis. (2015) (58)
- Leveraging Distant Relatedness to Quantify Human Mutation and Gene-Conversion Rates. (2015) (58)
- Population-specific causal disease effect sizes in functionally important regions impacted by selection (2019) (55)
- Association studies of common variants in 10 hypogonadotropic hypogonadism genes with age at menarche. (2008) (54)
- Genetic variation in RNASEL associated with prostate cancer risk and progression. (2010) (54)
- Atlas of prostate cancer heritability in European and African-American men pinpoints tissue-specific regulation (2016) (52)
- Disease heritability enrichment of regulatory elements is concentrated in elements with ancient sequence age and conserved function across species (2018) (51)
- Improving the Power of GWAS and Avoiding Confounding from Population Stratification with PC-Select (2014) (50)
- Amerind Ancestry, Socioeconomic Status and the Genetics of Type 2 Diabetes in a Colombian Population (2012) (50)
- Detecting genome-wide directional effects of transcription factor binding on polygenic disease risk (2017) (48)
- Estimating cross‐population genetic correlations of causal effect sizes (2018) (48)
- Incorporating functional priors improves polygenic prediction accuracy in UK Biobank and 23andMe data sets (2021) (47)
- Modeling functional enrichment improves polygenic prediction accuracy in UK Biobank and 23andMe data sets (2018) (45)
- Orthologous repeats and mammalian phylogenetic inference. (2005) (44)
- High-throughput inference of pairwise coalescence times identifies signals of selection and enriched disease heritability (2018) (44)
- Analysis of case-control association studies with known risk variants (2012) (43)
- Leveraging fine-mapping and multi-population training data to improve cross-population polygenic risk scores (2022) (41)
- Population Structure of UK Biobank and Ancient Eurasians Reveals Adaptation at Genes Influencing Blood Pressure. (2016) (41)
- Multiethnic Genome-Wide Association Study of Diabetic Retinopathy Using Liability Threshold Modeling of Duration of Diabetes and Glycemic Control (2018) (41)
- Identifying loci with different allele frequencies among cases of eight psychiatric disorders using CC-GWAS (2020) (40)
- Heritability enrichment of specifically expressed genes identifies disease-relevant tissues and cell types (2018) (39)
- Leveraging population admixture to explain missing heritability of complex traits (2014) (39)
- Genetic and environmental components of family history in type 2 diabetes (2015) (39)
- A genome‐wide association study suggests new evidence for an association of the NADPH Oxidase 4 (NOX4) gene with severe diabetic retinopathy in type 2 diabetes (2018) (37)
- Quantifying the Genetic Correlation between Multiple Cancer Types (2017) (37)
- Multi-ethnic polygenic risk scores improve risk prediction in diverse populations (2016) (36)
- IMPACT: Genomic Annotation of Cell-State-Specific Regulatory Elements Inferred from the Epigenome of Bound Transcription Factors (2018) (35)
- Liability threshold modeling of case-control status and family history of disease increases association power (2020) (35)
- Explicit modeling of ancestry improves polygenic risk scores and BLUP prediction (2014) (33)
- Single-cell eQTL models reveal dynamic T cell state dependence of disease loci (2022) (33)
- A polygenic resilience score moderates the genetic risk for schizophrenia (2019) (31)
- Identifying repeat domains in large genomes (2006) (31)
- Estimating heritability and its enrichment in tissue-specific gene sets in admixed populations (2021) (31)
- A single-cell and spatial atlas of autopsy tissues reveals pathology and cellular targets of SARS-CoV-2 (2021) (30)
- Balancing Selection on a Regulatory Region Exhibiting Ancient Variation That Predates Human–Neandertal Divergence (2013) (28)
- Quantification of frequency-dependent genetic architectures and action of negative selection in 25 UK Biobank traits (2017) (27)
- Combining SNP-to-gene linking strategies to identify disease genes and assess disease omnigenicity (2022) (25)
- Two variance component model improves genetic prediction in family data sets (2015) (25)
- Identifying disease-critical cell types and cellular processes across the human body by integration of single-cell profiles and human genetics (2021) (24)
- Leveraging fine-mapping and non-European training data to improve trans-ethnic polygenic risk scores (2021) (24)
- Haplotypes of common SNPs can explain missing heritability of complex diseases (2015) (23)
- Genes with High Network Connectivity Are Enriched for Disease Heritability. (2019) (23)
- Regulatory variants explain much more heritability than coding variants across 11 common diseases (2014) (22)
- Reconciling S-LDSC and LDAK models and functional enrichment estimates (2018) (19)
- Subtle stratification confounds estimates of heritability from rare variants (2016) (18)
- Identifying disease-critical cell types and cellular processes by integrating single-cell RNA-sequencing and human genetics (2022) (18)
- Evaluating the informativeness of deep learning annotations for human complex diseases (2019) (18)
- Genes with high network connectivity are enriched for disease heritability (2018) (17)
- Genetically Determined Plasma Lipid Levels and Risk of Diabetic Retinopathy: A Mendelian Randomization Study (2017) (15)
- Replication and fine mapping of asthma-associated loci in individuals of African ancestry (2013) (15)
- Functional disease architectures reveal unique biological role of transposable elements (2018) (14)
- Polygenic enrichment distinguishes disease associations of individual cells in single-cell RNA-seq data (2021) (14)
- Estimating the proportion of disease heritability mediated by gene expression levels (2017) (13)
- Mixed Model Association with Family-Biased Case-Control Ascertainment. (2017) (13)
- GBAT: a gene-based association test for robust detection of trans-gene regulation (2020) (13)
- Incorporating family history of disease improves polygenic risk scores in diverse populations (2021) (13)
- Consortium, G.P A map of human genome variation from population-scale sequencing. Nature 467, 1061-1073 (2010) (13)
- Quantitative analysis of population-scale family trees using millions of relatives (2017) (12)
- Fast principal components analysis reveals convergent evolution of ADH1B gene in Europe and East Asia (2015) (12)
- Annotations capturing cell-type-specific TF binding explain a large fraction of disease heritability (2018) (12)
- Genome-wide maps of enhancer regulation connect risk variants to disease genes (2020) (12)
- Meta‐Analysis of Rare Variant Association Tests in Multiethnic Populations (2016) (11)
- GBAT: a gene-based association method for robust trans-gene regulation detection (2018) (10)
- Improving the informativeness of Mendelian disease-derived pathogenicity scores for common disease (2020) (10)
- Response to Sul and Eskin (2013) (9)
- Functional architecture of low-frequency variants highlights strength of negative selection across coding and non-coding annotations (2018) (9)
- Quantification of genetic components of population differentiation in UK Biobank traits reveals signals of polygenic selection (2018) (8)
- Transethnic genetic correlation estimates from summary statistics (2016) (8)
- Author reply to A commentary on Pitfalls of predicting complex traits from SNPs (2013) (8)
- SNP-to-gene linking strategies reveal contributions of enhancer-related and candidate master-regulator genes to autoimmune disease (2022) (7)
- LD hub and MR-base: online platforms for preforming LD score regression and Mendelian randomization analysis using GWAS summary data (2016) (7)
- Deep targeted sequencing of 12 breast cancer susceptibility regions in 4611 women across four different ethnicities (2016) (7)
- Estimating heritability of complex traits in admixed populations with summary statistics (2018) (7)
- Author Correction: Distinguishing genetic correlation from causation across 52 diseases and complex traits (2018) (6)
- Leveraging fine-mapping and non-European training data to improve cross-population polygenic risk scores (2021) (6)
- Local Joint Testing Improves Power and Identifies Hidden Heritability in Association Studies (2016) (6)
- Leveraging molecular QTL to understand the genetic architecture of diseases and complex traits (2017) (6)
- Genome-wide scan of 29,141 African Americans finds no evidence of selection since admixture (2013) (5)
- Negative short-range genomic autocorrelation of causal effects on human complex traits (2020) (5)
- Low-frequency variant functional architectures reveal strength of negative selection across coding and non-coding annotations (2018) (5)
- Strong Association of Socioeconomic Status and Genetic Ancestry in Latinos (2011) (5)
- Correcting subtle stratification in summary association statistics (2016) (5)
- Leveraging gene co-regulation to identify gene sets enriched for disease heritability (2021) (5)
- In silico integration of thousands of epigenetic datasets into 707 cell type regulatory annotations improves the trans-ethnic portability of polygenic risk scores (2020) (4)
- Publisher Correction: Shared heritability and functional enrichment across six solid cancers (2019) (4)
- Leveraging single-cell ATAC-seq to identify disease-critical fetal and adult brain cell types (2021) (4)
- The collective entrepreneur: social enterprise and the smart state (2011) (4)
- Contribution of enhancer-driven and master-regulator genes to autoimmune disease revealed using functionally informed SNP-to-gene linking strategies (2020) (4)
- Corrigendum: Reconstructing Native American population history (2012) (4)
- Leveraging distant relatedness to quantify human mutation and gene conversion rates (2015) (4)
- Combining SNP-to-gene linking strategies to pinpoint disease genes and assess disease omnigenicity (2021) (4)
- A genome-wide association study suggests new evidence for an association of the NADPH Oxidase 4 ( NOX 4 ) gene with severe diabetic retinopathy in type 2 diabetes (2018) (3)
- Functional partitioning of local and distal gene expression regulation in multiple human tissues (2016) (3)
- Combining case-control status and family history of disease increases association power (2019) (3)
- Integrative approaches to improve the informativeness of deep learning models for human complex diseases (2020) (2)
- Quantification of frequency-dependent genetic architectures in 25 UK Biobank traits reveals action of negative selection (2019) (2)
- Genomic analyses for age at menarche identify 389 independent signals and indicate BMI-independent effects of puberty timing on cancer susceptibility (2016) (2)
- Response to Day et al. (2016) (2)
- Lecture Notes in Bioinformatics (Subseries of Lecture Notes in Computer Science): Preface (2005) (2)
- Rheumatoid arthritis heritability is concentrated in regulatory elements with CD4+ T cell-state-specific transcription factor binding profiles (2018) (1)
- Mixed Model with Correction for Case-Control Ascertainment Increases Association Power (2014) (1)
- Modeling memory T cell states at single-cell resolution identifies in vivo state-dependence of eQTLs influencing disease (2021) (1)
- Mixed Model Association with Family-Biased Case-Control Ascertainment (2016) (1)
- Pevzner evolutionary history repeat elements reveals complexAluWhole-genome analysis of data (2004) (1)
- Population structure of UK Biobank and ancient Eurasians reveals adaptation at genes influencing blood pressure (2016) (1)
- Deep targeted sequencing of 12 breast cancer susceptibility regions in 4611 women across four different ethnicities (2016) (1)
- NpgRJ_Ng_2007-27 1..6 (2007) (0)
- Random Forest Outperforms Other Phenotype Prediction Algorithms (2019) (0)
- Age at first birth in women is genetically associated with increased risk of schizophrenia (2018) (0)
- Abstract 4611: Quantification and functional characterization of the shared heritability across multiple cancer sites: results from the GAME-ON Consortium (2015) (0)
- High-throughput inference of pairwise coalescence times identifies signals of selection and enriched disease heritability (2018) (0)
- Systematically characterizing the roles of E3-ligase family members in inflammatory responses with massively parallel Perturb-seq (2023) (0)
- Reconciling S-LDSC and LDAK functional enrichment estimates (2019) (0)
- African gene flow into West Eurasia in the last 3,000 years (2010) (0)
- Shared heritability and functional enrichment across six solid cancers (2019) (0)
- Author Correction: Linkage disequilibrium–dependent architecture of human complex traits shows action of negative selection (2019) (0)
- Transcriptome-wide association study of schizophrenia and chromatin activity yields mechanistic disease insights (2018) (0)
- Orthologous repeats and mammalian phylogenetic inference data (2005) (0)
- Supplementary Information for Extremely low-coverage sequencing and imputation increases power for genome-wide association studies (2012) (0)
- Modeling tissue co-regulation to estimate tissue-specific contributions to disease (2023) (0)
- Method Identifying repeat domains in large genomes (2006) (0)
- Population Structure and Eigenanalysis The Harvard community has made this article openly available. Please share how this access benefits you. Your story matters (2006) (0)
- Orthologous Repeats and Phylogenetic Inference (2004) (0)
- Erratum. Multiethnic Genome-Wide Association Study of Diabetic Retinopathy Using Liability Threshold Modeling of Duration of Diabetes and Glycemic Control. Diabetes 2019;68:441—456 (2020) (0)
- 10 CASE-CASE GWAS OF TWO DIFFERENT DISORDERS USING CASE-CONTROL SUMMARY STATISTICS (2019) (0)
- Estimating Evolutionary Parameters and Detecting Signals of Natural Selection from Genetic Data by (0)
- Genetic and environmental components of family history in type 2 diabetes (2014) (0)
- Quantifying genetic effects on disease mediated by assayed gene expression levels (2020) (0)
- 1 Analysis of Shared Heritability in Common Disorders of the Brain 1 (2017) (0)
- Detecting genome-wide directional effects of transcription factor binding on polygenic disease risk (2018) (0)
- Leveraging molecular quantitative trait loci to understand the genetic architecture of diseases and complex traits (2018) (0)
- Genomic Prediction and Genome Wide Association in Humans with Whole Genome Sequence Data (2014) (0)
- Author Correction: Distinguishing genetic correlation from causation across 52 diseases and complex traits (2018) (0)
- Liability threshold modeling of case–control status and family history of disease increases association power (2020) (0)
- Distinguishing correlation from causation using genome-wide association studies (2018) (0)
- Distinguishing genetic correlation from causation across 52 diseases and complex traits (2018) (0)
- Response to Shen et al. (2016) (0)
- Local joint testing improves power and identifies missing heritability in association studies (2016) (0)
- VKučinskas-2001-2016 (2016) (0)
- Replication and fine mapping of asthma-associated loci in individuals of African ancestry (2013) (0)
- The role of the CD[subscript 5]8 locus in multiple sclerosis (2009) (0)
- Estimating and interpreting F[subscript ST]: The impact of rare variants (2013) (0)
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