Allan E. Konopka
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Allan E. Konopkaearth-sciences Degrees
Earth Sciences
#2041
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#2802
Historical Rank
Soil Science
#72
World Rank
#80
Historical Rank
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Earth Sciences
Why Is Allan E. Konopka Influential?
(Suggest an Edit or Addition)Allan E. Konopka's Published Works
Number of citations in a given year to any of this author's works
Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- FIELD-SCALE VARIABILITY OF SOIL PROPERTIES IN CENTRAL IOWA SOILS (1994) (3246)
- Measurement of in situ activities of nonphotosynthetic microorganisms in aquatic and terrestrial habitats. (1985) (1473)
- Quantifying community assembly processes and identifying features that impose them (2013) (921)
- Stochastic and deterministic assembly processes in subsurface microbial communities (2012) (906)
- Estimating and mapping ecological processes influencing microbial community assembly (2015) (413)
- What is microbial community ecology? (2009) (377)
- The Use of Carbon Substrate Utilization Patterns in Environmental and Ecological Microbiology (1998) (361)
- Surface and subsurface microbial biomass, community structure and metabolic activity as a function of soil depth and season (2002) (350)
- Groundwater–surface water mixing shifts ecological assembly processes and stimulates organic carbon turnover (2015) (234)
- Dynamics in microbial communities: unraveling mechanisms to identify principles (2014) (205)
- Effect of Temperature on Blue-Green Algae (Cyanobacteria) in Lake Mendota (1978) (179)
- Association of Microbial Community Composition and Activity with Lead, Chromium, and Hydrocarbon Contamination (2002) (138)
- Optimization of MALDI-TOF MS for strain level differentiation of Arthrobacter isolates. (2006) (135)
- Mathematical Modeling of Microbial Community Dynamics: A Methodological Review (2014) (131)
- Microbial Community Analysis of Soils Contaminated with Lead, Chromium and Petroleum Hydrocarbons (2006) (130)
- Persistence of uranium groundwater plumes: contrasting mechanisms at two DOE sites in the groundwater-river interaction zone. (2013) (127)
- Microbial Biomass and Activity in Lead-Contaminated Soil (1999) (123)
- Biodegradation of organic compounds in vadose zone and aquifer sediments (1991) (118)
- Constraint-Based Model of Shewanella oneidensis MR-1 Metabolism: A Tool for Data Analysis and Hypothesis Generation (2010) (116)
- Bacterial Activity, Community Structure, and Centimeter-Scale Spatial Heterogeneity in Contaminated Soil (2006) (110)
- Vertical stratification of subsurface microbial community composition across geological formations at the Hanford Site. (2012) (107)
- Soil Microbial Community Responses to Additions of Organic Carbon Substrates and Heavy Metals (Pb and Cr) (2005) (106)
- Pyruvate and Lactate Metabolism by Shewanella oneidensis MR-1 under Fermentation, Oxygen Limitation, and Fumarate Respiration Conditions (2011) (105)
- Spatial and temporal dynamics of the microbial community in the Hanford unconfined aquifer (2012) (102)
- Influences of organic carbon speciation on hyporheic corridor biogeochemistry and microbial ecology (2018) (95)
- Cybernetic modeling of growth in mixed, substitutable substrate environments: Preferential and simultaneous utilization. (1996) (94)
- Microbial sulfate reduction in acidic (pH 3) strip-mine lakes (1990) (92)
- Degradation of Pyridine by Micrococcus luteus Isolated from Soil (1986) (84)
- Processing of atmospheric nitrogen by clouds above a forest environment (2007) (81)
- Genome-Scale Modeling of Light-Driven Reductant Partitioning and Carbon Fluxes in Diazotrophic Unicellular Cyanobacterium Cyanothece sp. ATCC 51142 (2012) (81)
- Primary and Bacterial Production in Two Dimictic Indiana Lakes (1985) (78)
- Integrating cybernetic modeling with pathway analysis provides a dynamic, systems‐level description of metabolic control (2008) (77)
- Characterization of a Pseudomonas sp. Capable of Aniline Degradation in the Presence of Secondary Carbon Sources (1989) (77)
- Long-term effects of chromium and lead upon the activity of soil microbial communities (2002) (74)
- Inference of interactions in cyanobacterial–heterotrophic co-cultures via transcriptome sequencing (2014) (71)
- Bacterioplankton Community Diversity in a Series of Thermally Stratified Lakes (1999) (70)
- Algal and Bacterial Activities in Acidic (pH 3) Strip Mine Lakes (1987) (70)
- Seasonal Bacterial Production in a Dimictic Lake as Measured by Increases in Cell Numbers and Thymidine Incorporation (1985) (68)
- High-level chromate resistance in Arthrobacter sp. strain FB24 requires previously uncharacterized accessory genes (2009) (67)
- Buoyancy regulation by planktonic blue-green algae in Lake Mendota, Wisconsin (1978) (65)
- Modeling Microbial Dynamics in Heterogeneous Environments: Growth on Soil Carbon Sources (2011) (65)
- REGULATION OF GAS VESICLE CONTENT AND BUOYANCY IN LIGHT‐ OR PHOSPHATE‐LIMITED CULTURES OF APHANIZOMENON FLOS‐AQUAE (CYANOPHYTA) 1 (1987) (61)
- Effect of Nutrient Periodicity on Microbial Community Dynamics (2006) (60)
- Computational evaluation of Synechococcus sp. PCC 7002 metabolism for chemical production. (2013) (60)
- Effects of elevated temperature on bacterial community structure and function in bioreactors treating a synthetic wastewater (2000) (58)
- Genomic distribution of B-vitamin auxotrophy and uptake transporters in environmental bacteria from the Chloroflexi phylum. (2015) (57)
- BIOCHEMICAL COMPOSITION AND PHOTOSYNTHETIC CARBON METABOLISM OF NUTRIENT LIMITED CULTURES OF MERISMOPEDIA TENUISSIMA (CYANOPHYCEAE) 1 (1981) (52)
- Atmospheric cloud water contains a diverse bacterial community (2011) (51)
- Microbial physiological state at low growth rate in natural and engineered ecosystems. (2000) (50)
- GENETIC VARIATION IN APHANIZOMENON (CYANOBACTERIA) COLONIES FROM THE BALTIC SEA AND NORTH AMERICA (2000) (50)
- Buoyancy regulation and vertical migration by Oscillatoria rubescens in Crooked Lake, Indiana (1982) (49)
- Spatially resolved analysis of glycolipids and metabolites in living Synechococcus sp. PCC 7002 using nanospray desorption electrospray ionization. (2013) (49)
- Quantification of bacterial lead resistance via activity assays. (1999) (48)
- Buoyancy Regulation in a Strain of Aphanizomenon flos-aquae (Cyanophyceae): the Importance of Carbohydrate Accumulation and Gas Vesicle Collapse (1986) (48)
- Isolation and characterization of a subsurface bacterium that degrades aniline and methylanilines (1993) (48)
- Thermophilic aerobic treatment of a synthetic wastewater in a membrane-coupled bioreactor (2001) (48)
- Metalimnetic cyanobacteria in hard‐water lakes: Buoyancy regulation and physiological state (1989) (46)
- Buoyancy regulation in light-limited continuous cultures of Microcystis aeruginosa (1988) (45)
- Global proteomic analysis of the chromate response in Arthrobacter sp. strain FB24. (2009) (45)
- Micrometer-scale physical structure and microbial composition of soil macroaggregates (2013) (45)
- Distribution of Microbial Biomass and Potential for Anaerobic Respiration in Hanford Site 300 Area Subsurface Sediment (2011) (44)
- Buoyancy regulation in phosphate-limited cultures of Microcystis aeruginosa (1987) (43)
- New patterns of mixed-substrate utilization during batch growth of Escherichia coli K12. (1997) (42)
- Biodegradation of organic wastes containing surfactants in a biomass recycle reactor (1996) (42)
- Effect of mono- and dichromatic light quality on growth rates and photosynthetic performance of Synechococcus sp. PCC 7002 (2014) (41)
- Analyses of microbial activity in biomass-recycle reactors using denaturing gradient gel electrophoresis of 16S rDNA and 16S rRNA PCR products. (2002) (41)
- Responses of the Anaerobic Bacterial Community to Addition of Organic C in Chromium(VI)- and Iron(III)-Amended Microcosms (2006) (41)
- Functional inclusions in prokaryotic cells. (1988) (39)
- Thermophilic Aerobic Wastewater Treatment in Continuous-Flow Bioreactors (2000) (39)
- Physiological ecology of a metalimnetic Oscillatoria rubescens population1 (1982) (39)
- Evaluation of Naturally‐Occurring Organisms as Food for Juvenile Crayfish Procambarus clarkii1 (1992) (38)
- Functional and Structural Adaptations of Bacterial Communities Growing on Particulate Substrates under Stringent Nutrient Limitation (2002) (38)
- Measurements of microbial community activities in individual soil macroaggregates (2012) (37)
- Propachlor degradation by a soil bacterial community (1991) (37)
- Feedback-controlled LED photobioreactor for photophysiological studies of cyanobacteria. (2013) (37)
- Sustained H2 Production Driven by Photosynthetic Water Splitting in a Unicellular Cyanobacterium (2012) (34)
- Unlocking the Constraints of Cyanobacterial Productivity: Acclimations Enabling Ultrafast Growth (2016) (34)
- Biodegradation of carbofuran in enhanced and non-enhanced soils (1990) (33)
- Effects of macronutrients upon buoyancy regulation by metalimnetic Oscillatoria agardhii in Deming Lake, Minnesota (1993) (33)
- Microbial reductive transformation of phyllosilicate Fe(III) and U(VI) in fluvial subsurface sediments. (2012) (33)
- Gas vesicle assembly in Microcyclus aquaticus (1975) (32)
- Dynamic modeling of aerobic growth of Shewanella oneidensis. Predicting triauxic growth, flux distributions, and energy requirement for growth. (2013) (31)
- Causes and Consequences of Blue-Green Algal (Cyanobacterial) Blooms (1989) (30)
- Microbial Biomass and Activity in Lead-Contaminated Soil (1999) (30)
- Microbial community dynamics in nutrient-pulsed chemostats. (2006) (30)
- Live cell chemical profiling of temporal redox dynamics in a photoautotrophic cyanobacterium. (2014) (30)
- Microbial Ecology: Searching for Principles (2006) (30)
- Inhibition of Nitrate Reduction by Chromium(VI) in Anaerobic Soil Microcosms (2009) (30)
- Theoretical Analysis of the Starvation Response under Substrate Pulses (1999) (28)
- Comparative analysis of eight Arthrobacter plasmids. (2008) (28)
- Characterization of protein redox dynamics induced during light-to-dark transitions and nutrient limitation in cyanobacteria (2014) (27)
- The Dynamics of Microbial Growth on Mixtures of Substrates in Batch Reactors. (1997) (27)
- Microbial catabolic diversity in soils contaminated with hydrocarbons and heavy metals. (2005) (26)
- Dynamic analysis of the cybernetic model for diauxic growth (1997) (25)
- Effect of starvation length upon microbial activity in a biomass recycle reactor (2002) (25)
- Live Cell Discovery of Microbial Vitamin Transport and Enzyme-Cofactor Interactions. (2016) (25)
- Bacterial function and community structure in reactors treating biopolymers and surfactants at mesophilic and thermophilic temperatures (1999) (25)
- Spatial and temporal distribution of caulobacter spp in two mesotrophic lakes (1987) (24)
- Aciduric Proteobacteria isolated from pH 2.9 soil (2002) (24)
- Community dynamics and heterogeneities in mixed bacterial communities subjected to nutrient periodicities. (2007) (24)
- Coupling among Microbial Communities, Biogeochemistry, and Mineralogy across Biogeochemical Facies (2016) (23)
- Effect of light intensity on macromolecular synthesis in cyanobacteria (1980) (22)
- THE EFFECT OF NUTRIENT LIMITATION AND ITS INTERACTION WITH LIGHT UPON THE PRODUCTS OF PHOTOSYNTHESIS IN MERISMOPEDIA TENUISSIMA (CYANOPHYCEAE) 1 (1983) (22)
- Changes in photosynthetic rate and pigment content of blue-green algae in Lake Mendota (1978) (22)
- Synthesis and application of an environmentally insensitive Cy3-based arsenical fluorescent probe to identify adaptive microbial responses involving proximal dithiol oxidation. (2013) (21)
- Is the information content of DNA evolutionarily significant? (1984) (20)
- The effects of temperature on bacterial production in a dimictic eutrophic lake (1985) (20)
- Application of meta-transcriptomics and -proteomics to analysis of in situ physiological state (2012) (20)
- Microbial growth on substitutable substrates: characterizing the consumer-resource relationship. (1997) (19)
- Taxonomy of Microcyclus and Other Nonmotile, Ring-Forming Bacteria (1976) (19)
- Physiological state of a microbial community in a biomass recycle reactor (1998) (19)
- Influence of Temperature, Oxygen, and pH on a Metalimnetic Population of Oscillatoria rubescens (1981) (18)
- Thymidine Incorporation by Free-Living and Particle-Bound Bacteria in a Eutrophic Dimictic Lake (1985) (17)
- Physiological and Ecological Adaptations of Slow-Growing, Heterotrophic Microbes and Consequences for Cultivation (2009) (17)
- Complete genome sequence of Arthrobacter sp. strain FB24 (2013) (17)
- Anaerobic degradation of chloroacetanilide herbicides (1994) (16)
- Environmental Controls on the Activity of Aquifer Microbial Communities in the 300 Area of the Hanford Site (2013) (16)
- Accumulation and utilization of polysaccharide by hot-spring phototrophs during a light-dark transition (1992) (15)
- CARBON AVAILABILITY AND THE PATTERN OF CYANOBACTERIAL DOMINANCE IN ENRICHED LOW‐CARBON LAKES 1 (1995) (14)
- A Structure-Activity Study with Aryl Acylamidases (1994) (13)
- Evaluation of methods to solubilize and analyze cell-associated ectoenzymes. (2002) (12)
- Physiological Changes Within a Metalimnetic Layer of Oscillatoria rubescens (1980) (12)
- Microbial biodegradation of organic wastes containing surfactants in a continuous-flow reactor (1997) (12)
- Excretion of photosynthetically fixed organic carbon by metalimnetic phytoplankton (1985) (11)
- Microbiology of the Sulfur Cycle (1986) (11)
- Integrated 'omics analysis for studying the microbial community response to a pH perturbation of a cellulose-degrading bioreactor culture. (2014) (11)
- Epilimnetic and Metalimnetic Primary Production in an Indiana Hardwater Lake (1983) (10)
- Multi-Scale Mass Transfer Processes Controlling Natural Attenuation and Engineered Remediation: An IFRC Focused on Hanford’s 300 Area Uranium Plume (2007) (10)
- Energy spilling by thermophilic aerobes in potassium-limited continuous culture (2000) (10)
- Inhibition of gas vesicle production in Microcyclus aquaticus by L-lysine. (1977) (10)
- Single-cell genomics reveals metabolic strategies for microbial growth and survival in an oligotrophic aquifer. (2014) (8)
- Cybernetic modeling of metabolism: towards a framework for rational design of recombinant organisms (2004) (7)
- Isolation and characterization of gas vesicles from Microcyclus aquaticus (1977) (7)
- Toward a mathematical theory of living systems focusing on developmental biology and evolution: A review and perspectives (2013) (7)
- Isolation of Motile Variants from Gas-vacuolate Strains of Ancylobacter aquaticus (1987) (6)
- Microbial Sulfate Reduction In Extremely Acid Lakes (1985) (6)
- Primary andBacterial Production inTwoDimictic Indiana Lakes (1985) (6)
- Autotrophic Growth of Gas Vacuolate Strains of Microcyclus aquaticus on Methanol and Hydrogen (1984) (4)
- Song, H.-S., et al. Mathematical Modeling of Microbial Community Dynamics: A Methodological Review. Processes 2014, 2, 711–752 (2015) (4)
- Agricultural Impact On Groundwater Quality (1988) (4)
- IncP-mediated transfer of loci involved with gas vesicle production in Ancylobacter aquaticus (1990) (4)
- Publisher Correction: Influences of organic carbon speciation on hyporheic corridor biogeochemistry and microbial ecology (2018) (4)
- Multi-Scale Mass Transfer Processes Controlling Natural Attenuation and Engineered Remediation: An IFRC Focused on Hanford’s 300 Area Uranium Plume January 2011 to January 2012 (2012) (4)
- Ecological Interactions Between Metals and Microbes (2004) (3)
- Sodium hypochlorite perturbation of a graywater treatment system (2000) (3)
- REGULATION OF GAS VESICLE CONTENT AND BUOYANCY IN LIGHT‐OR PHOSPHATE‐LIMITED CULTURES OF APHANIZOMENON FLOS‐AQUAE (CYANOPHYTA) 1 (1987) (3)
- Single-cell genomics reveals metabolic strategies for microbial growth and survival in an oligotrophic aquifer. (2014) (3)
- Response of Microbial Populations to Carbofuran in Soils Enhanced for Its Degradation (1990) (3)
- Cybernetic Modeling of Growth in Mixed , Substitutable Substrate E n vi r o n m en t s : Prefer e n t i a I a n d Simultaneous Utilization (2003) (3)
- Multi-Scale Mass Transfer Processes Controlling Natural Attenuation and Engineered Remediation: An IFRC Focused on Hanford’s 300 Area Uranium Plume January 2010 to January 2011 (2011) (3)
- Ancylobacter Raj 1983, 397VP (2005) (2)
- Microbial Diversity and Biogeochemical Function of the Phototrophic Microbial Mats of Epsomitic Hot Lake, WA (2012) (2)
- Imaging of Lipids, Metabolites and Drugs with Nanospray Desorption Electrospray Ionization Mass Spectrometry (2013) (2)
- Microbial hydrocarbons: back to the future (2012) (1)
- GasVesicle Assembly inMicrocyclus aquaticus (1975) (1)
- A Green Sulfur Bacterium From Epsomitic Hot Lake, Washington, USA. (2020) (1)
- Microbial Ecology : Searching for Principles The extraordinary diversity of microbial ecosystems complicates efforts to develop principles encompassing microbial ecology (2006) (1)
- Modeling Microbial Dynamics in Heterogeneous Environments: Growth on Soil Carbon Sources (2011) (0)
- Publisher Correction: Influences of organic carbon speciation on hyporheic corridor biogeochemistry and microbial ecology (2018) (0)
- Selective Feeding By Zooplankton: Implications For Lake Productivity (1983) (0)
- of Secondary Carbon Sources Presence Capable of Aniline Degradation in the Characterization of a Pseudomonas sp. (2013) (0)
- Contribution Of Subsoil And Aquifer Microorganisms To Groundwater Quality (1989) (0)
- Protein Expression Profile of an Environmentally Important Bacterial Strain: the Chromate Response of Arthrobacter Species Strain FB24 (2011) (0)
- Characterization ofa Pseudomonas sp.Capable ofAniline Degradation inthePresence ofSecondary CarbonSourcest (1989) (0)
- Ecological Interactions Between Metals and Microbes That Impact Bioremediation (1998) (0)
- Microbial diversity in subsurface sediments (1994) (0)
- Autotrophic GrowthofGasVacuolate Strains ofMicrocyclus aquaticus on Methanol andHydrogen (1984) (0)
- Acid tolerance of chemoheterotrophic bacteria isolated from an acidic soil (2001) (0)
- Simulation Software To Augmen Laboratory Exercises (2016) (0)
- Influences of organic carbon speciation on hyporheic corridor biogeochemistry and microbial ecology (2018) (0)
- Simulation Software to Augment Laboratory Exercises: An Example from Microbiology. (1999) (0)
- Coupled Spatiotemporal Dynamics of Microbial Community Ecology, Biogeochemistry, and Hydrologic Mixing (2015) (0)
- A Structure-Activi ty Study withAryl Acylamidases (1994) (0)
- Microbial sulfate reduction in extremely acid lakes. Technical report, (Final) 1 August 1984-30 September 1985 (1985) (0)
- Degradation ofPyridine byMicrococcus luteus Isolated fromSoilt (1986) (0)
- Community Structure in Contaminated Habitats: The dynamic tension between selective forces and environmental heterogeneity (2006) (0)
- Agricultural impact on ground-water quality. Technical report (Final), 1 July 1987-30 June 1988 (1988) (0)
- Biotechnological Remediation of Shipboard Waste Effluents. (1999) (0)
- Microbial growth: growth of the bacterial cell. (1984) (0)
- Environmental Controls on the Activity of Aquifer Microbial Communities in the 300 Area of the Hanford Site (2013) (0)
- Microbial Communities Initiative: Melding Technology, Experimentation, and Theory (2009) (0)
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What Schools Are Affiliated With Allan E. Konopka?
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