Ana Pombo
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Biology
Ana Pombo's Degrees
- PhD Biomedical Sciences University of Lisbon
- Masters Biochemistry University of Porto
- Bachelors Biology University of Coimbra
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Why Is Ana Pombo Influential?
(Suggest an Edit or Addition)According to Wikipedia, Ana Pombo is an appointed Professor of Biology at Humboldt University and senior group leader at the Berlin Institute for Medical Systems Biology at the Max Delbrück Center for Molecular Medicine in Berlin-Buch with the focus on "Epigenetic Regulation and Chromatin Architecture". Since May 2018, Pombo is an elected member of the European Molecular Biology Organization .
Ana Pombo's Published Works
Number of citations in a given year to any of this author's works
Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- Replicon Clusters Are Stable Units of Chromosome Structure: Evidence That Nuclear Organization Contributes to the Efficient Activation and Propagation of S Phase in Human Cells (1998) (794)
- Intermingling of Chromosome Territories in Interphase Suggests Role in Translocations and Transcription-Dependent Associations (2006) (711)
- Ring1-mediated ubiquitination of H2A restrains poised RNA polymerase II at bivalent genes in mouse ES cells (2007) (697)
- Formation of new chromatin domains determines pathogenicity of genomic duplications (2016) (509)
- Transcribed enhancers lead waves of coordinated transcription in transitioning mammalian cells (2015) (502)
- Dendritic cells interact directly with naive B lymphocytes to transfer antigen and initiate class switching in a primary T-dependent response. (1998) (487)
- Active RNA polymerases are localized within discrete transcription "factories' in human nuclei. (1996) (477)
- Complex multi-enhancer contacts captured by Genome Architecture Mapping (GAM) (2017) (476)
- Complexity of chromatin folding is captured by the strings and binders switch model (2012) (442)
- Three-dimensional genome architecture: players and mechanisms (2015) (430)
- Short RNAs are transcribed from repressed polycomb target genes and interact with polycomb repressive complex-2. (2010) (388)
- Mechanical regulation of transcription controls Polycomb-mediated gene silencing during lineage commitment (2016) (321)
- Jarid2 is a PRC2 component in embryonic stem cells required for multi-lineage differentiation and recruitment of PRC1 and RNA Polymerase II to developmental regulators (2010) (315)
- Hierarchical folding and reorganization of chromosomes are linked to transcriptional changes in cellular differentiation (2015) (289)
- Polycomb Associates Genome-wide with a Specific RNA Polymerase II Variant, and Regulates Metabolic Genes in ESCs (2012) (280)
- Localization of a putative transcriptional regulator (ATRX) at pericentromeric heterochromatin and the short arms of acrocentric chromosomes. (1999) (260)
- Regional specialization in human nuclei: visualization of discrete sites of transcription by RNA polymerase III (1999) (259)
- Methods for mapping 3D chromosome architecture (2019) (257)
- Variant histone H3.3 marks promoters of transcriptionally active genes during mammalian cell division (2005) (182)
- Adenovirus replication and transcription sites are spatially separated in the nucleus of infected cells. (1994) (177)
- The balance sheet for transcription: an analysis of nuclear RNA metabolism in mammalian cells (2000) (174)
- Modifications of RNA polymerase II are pivotal in regulating gene expression states (2009) (155)
- FANTOM5 CAGE profiles of human and mouse samples (2017) (153)
- Regional and temporal specialization in the nucleus: a transcriptionally‐active nuclear domain rich in PTF, Oct1 and PIKA antigens associates with specific chromosomes early in the cell cycle (1998) (145)
- Polymer physics predicts the effects of structural variants on chromatin architecture (2018) (142)
- Maternal immune activation results in complex microglial transcriptome signature in the adult offspring that is reversed by minocycline treatment (2017) (140)
- Chromosome organization: new facts, new models. (2007) (119)
- Ring1B and Suv39h1 delineate distinct chromatin states at bivalent genes during early mouse lineage commitment (2010) (118)
- Measurement of replication structures at the nanometer scale using super-resolution light microscopy (2009) (105)
- Splicing speckles are not reservoirs of RNA polymerase II, but contain an inactive form, phosphorylated on serine2 residues of the C-terminal domain. (2006) (97)
- Models of chromosome structure. (2014) (94)
- LifeTime and improving European healthcare through cell-based interceptive medicine (2020) (87)
- Poised Transcription Factories Prime Silent uPA Gene Prior to Activation (2010) (84)
- Correlative Fluorescence and Electron Microscopy on Ultrathin Cryosections: Bridging the Resolution Gap (2001) (84)
- Transcription and Chromatin Organization of a Housekeeping Gene Cluster Containing an Integrated β-Globin Locus Control Region (2008) (83)
- Genome function and nuclear architecture: from gene expression to nanoscience. (2003) (78)
- Active and poised promoter states drive folding of the extended HoxB locus in mouse embryonic stem cells (2017) (74)
- Flipping between Polycomb repressed and active transcriptional states introduces noise in gene expression (2017) (66)
- The topology of transcription by immobilized polymerases. (1996) (63)
- Cell-type specialization is encoded by specific chromatin topologies (2021) (59)
- Measuring the size of biological nanostructures with spatially modulated illumination microscopy. (2004) (59)
- Specialized transcription factories within mammalian nuclei. (2000) (58)
- Fixation-induced redistribution of hyperphosphorylated RNA polymerase II in the nucleus of human cells. (2004) (57)
- R-Loops Enhance Polycomb Repression at a Subset of Developmental Regulator Genes (2019) (57)
- The localization of sites containing nascent RNA and splicing factors. (1996) (57)
- Functional organisation of the genome during interphase. (2007) (54)
- Bridging the Resolution Gap: Imaging the Same Transcription Factories in Cryosections by Light and Electron Microscopy (1999) (53)
- Transcription factories: quantitative studies of nanostructures in the mammalian nucleus (2004) (52)
- Gene positioning. (2010) (51)
- Eukaryotic gene regulation in three dimensions and its impact on genome evolution. (2008) (51)
- Changes in chromosome organization during PHA-activation of resting human lymphocytes measured by cryo-FISH (2008) (50)
- Functional Analysis of Vif Protein Shows Less Restriction of Human Immunodeficiency Virus Type 2 by APOBEC3G (2005) (45)
- Challenges and guidelines toward 4D nucleome data and model standards (2018) (44)
- Methylation of RNA polymerase II non-consensus Lysine residues marks early transcription in mammalian cells (2015) (42)
- Gene activation by metazoan enhancers: Diverse mechanisms stimulate distinct steps of transcription (2016) (42)
- Sea cucumber Holothuria forskali, a new resource for aquaculture? Reproductive biology and nutraceutical approach (2016) (41)
- Distribution of different phosphorylated forms of RNA polymerase II in relation to Cajal and PML bodies in human cells: an ultrastructural study (2005) (36)
- An H3K9/S10 methyl-phospho switch modulates Polycomb and Pol II binding at repressed genes during differentiation (2014) (35)
- RNA polymerase II primes Polycomb‐repressed developmental genes throughout terminal neuronal differentiation (2017) (35)
- Proteomic Analysis of Mitotic RNA Polymerase II Reveals Novel Interactors and Association With Proteins Dysfunctional in Disease* (2011) (33)
- A polymer model explains the complexity of large-scale chromatin folding (2013) (31)
- Phenotypic analysis of peripheral CD4+ CD8+ T cells in the rat (2000) (30)
- Three-dimensional genome architecture: players and mechanisms (2015) (29)
- The molecular basis for stability of heterochromatin-mediated silencing in mammals (2009) (29)
- Insight into aquaculture's potential of marine annelid worms and ecological concerns: a review (2018) (28)
- Effect of three diets on the growth and fatty acid profile of the common ragworm Hediste diversicolor (O.F. Müller, 1776) (2016) (26)
- On the structure of replication and transcription factories (1995) (24)
- Comparison of the Hi-C, GAM and SPRITE methods using polymer models of chromatin (2021) (23)
- CD8α is an activation marker for a subset of peripheral CD4 T cells (2004) (22)
- A model of the large-scale organization of chromatin. (2013) (18)
- Interaction of proteins with promoter elements of the human U2 snRNA genes in vivo. (2003) (16)
- Polymer physics, scaling and heterogeneity in the spatial organisation of chromosomes in the cell nucleus (2013) (15)
- Advances in imaging the interphase nucleus using thin cryosections (2007) (15)
- Trade of live bait in Portugal and risks of introduction of non-indigenous species associated to importation (2017) (15)
- The dynamics of chromatin architecture in brain development and function. (2021) (14)
- Mechanisms regulating S phase progression in mammalian cells. (2009) (13)
- Polymer models of chromatin organization (2013) (13)
- Effect of three diets on the gametogenic development and fatty acid profile of Paracentrotus lividus (Lamarck, 1816) gonads (2019) (12)
- The Biotechnological and Seafood Potential of Stichopus regalis (2015) (12)
- The effect of temperature on somatic and gonadal development of the sea urchin Paracentrotus lividus (Lamarck, 1816) (2020) (12)
- CD8 alpha is an activation marker for a subset of peripheral CD4 T cells. (2004) (11)
- Multiplex-GAM: genome-wide identification of chromatin contacts yields insights not captured by Hi-C (2020) (11)
- Mean Expression of the X-Chromosome is Associated with Neuronal Density (2012) (11)
- Cell cycle: Continuous chromatin changes (2017) (10)
- The status of farmed fish hearts: an alert to improve health and production in three Mediterranean species (2012) (10)
- Cell-type specialization in the brain is encoded by specific long-range chromatin topologies (2020) (10)
- Inference of chromosome 3D structures from GAM data by a physics computational approach. (2020) (10)
- Desmin immunolocalisation in autosomal dominant Emery-Dreifuss muscular dystrophy (2007) (10)
- Genomics meets nanoscience: probing genes and the cell nucleus at 10-9 meters (2002) (9)
- Somatic growth and gonadal development of Paracentrotus lividus (Lamarck, 1816) fed with diets of different ingredient sources (2021) (9)
- Do broodstock diets influence viability and larval development of Holothuria mammata? (2021) (9)
- Comparison of the Hi-C, GAM and SPRITE methods by use of polymer models of chromatin (2020) (9)
- Physical mechanisms behind the large scale features of chromatin organization (2014) (8)
- Potential use of macroalgae Gracilaria gracilis in diets for European seabass (Dicentrarchus labrax): Health benefits from a sustainable source. (2021) (8)
- Polymer models of the organization of chromosomes in the nucleus of cells (2015) (8)
- Code breaking: The RNAPII modification code in pluripotency (2012) (8)
- Can artificial diets be a feasible alternative for the gonadal growth and maturation of the sea urchin Paracentrotus lividus (Lamarck, 1816)? (2020) (8)
- Fungal diversity and mycotoxin distribution in echinoderm aquaculture (2019) (7)
- Polychaete annelids as live bait in Portugal: Harvesting activity in brackish water systems (2019) (7)
- Publisher Correction: LifeTime and improving European healthcare through cell-based interceptive medicine (2021) (7)
- Evolving methodologies and concepts in 4D nucleome research. (2020) (6)
- Modelling the Distribution of a Commercial NE-Atlantic Sea Cucumber, Holothuria mammata: Demographic and Abundance Spatio-Temporal Patterns (2021) (6)
- 3D chromatin regulation of Sonic hedgehog in the limb buds. (2009) (6)
- Interactions of adenovirus with the nucleus of the host cell (1995) (6)
- Reproductive biological characteristics and fatty acid profile of Holothuria mammata ( Grube , 1840 ) (2017) (5)
- CryoFISH: fluorescence in situ hybridization on ultrathin cryosections. (2010) (5)
- From linear genome sequence to three-dimensional organization of the cell nucleus (2003) (5)
- Cellular genomics: which genes are transcribed, when and where? (2003) (5)
- Keep Them Close: PRC2 Poises Enhancer-Promoter Interactions at Anterior Neuronal Genes. (2017) (5)
- The effects of stocking density on physiological traits in Holothuria forskali broodstock (2020) (5)
- Development of techniques for gender identification in Holothuria (2017) (4)
- Physical mechanisms behind the large scale features of chromatin organization. (2014) (4)
- Single-cell-resolved dynamics of chromatin architecture delineate cell and regulatory states in zebrafish embryos (2022) (4)
- Correlative microscopy using Tokuyasu cryosections: applications for immunogold labelling and in situ hybridisation (2006) (4)
- Effects of single and mixed-diatom diets on growth, condition, and survival of larvae of the sea urchin Paracentrotus lividus (Lamarck, 1816) (2021) (4)
- Single-cell-resolved dynamics of chromatin architecture delineate cell and regulatory states in wildtype and cloche/npas4l mutant zebrafish embryos (2020) (3)
- Reproductive Biology of the Sea Cucumber Holothuria mammata (Echinodermata: Holothuroidea) (2022) (3)
- Nucleus and gene expression: the structure and function conundrum. (2010) (3)
- Editorial overview: Genome architecture and expression. (2019) (3)
- Motivation and preferences of Portuguese consumers' towards sea urchin roe (2021) (2)
- Reproduction and growth of polychaete Hediste diversicolor (OF Müller, 1776) under different environmental conditions (2014) (2)
- Early Immune Modulation in European Seabass (Dicentrarchus labrax) Juveniles in Response to Betanodavirus Infection (2022) (2)
- Reproductive biology of north-eastern Atlantic sea cucumber species: a preliminary assessment (2018) (2)
- Complex Multi‐Enhancer Contacts Captured By Genome Architecture Mapping, A Novel Ligation‐Free Approach (2016) (2)
- Nuclear architecture in stem cells. (2010) (2)
- Single-Cell Analysis of the 3D Topologies of Genomic Loci Using Genome Architecture Mapping (2020) (2)
- Antibacterial, antifungal and antioxidant activity of sea cucumbers from the Peniche coast (Portugal) (2013) (2)
- Discovery of widespread transcription initiation at microsatellites predictable by sequence-based deep neural network (2021) (2)
- Examining Topological Domain Influence on Enhancer Function. (2016) (2)
- A Finer Print Than TADs: PRC1-Mediated Domains. (2017) (2)
- Polycomb Targets Seek Closest Neighbours (2011) (2)
- Ecological traits of sea cucumbers with commercial relevance from the north-eastern Atlantic coast (2018) (2)
- Potential for Coastal and Offshore Aquaculture in Portugal: Insights from Physico-Chemical and Oceanographic Conditions (2022) (2)
- Can artificial diets be a feasible alternative for gonadal growth and maturation of the sea urchin Paracentrotus lividus (Lamarck, 1816)? (2018) (2)
- Stem cell epigenetics: looking forward. (2014) (1)
- Author response: Methylation of RNA polymerase II non-consensus Lysine residues marks early transcription in mammalian cells (2015) (1)
- Altered nuclear architecture in blood cells from Huntington’s disease patients (2021) (1)
- Transcription factories and chromosome structure (1997) (1)
- Nuclear cell biology (2011) (1)
- Newcumber: Advances towards the sustainable rearing of sea cucumbers (2018) (1)
- LifeTime and improving European healthcare through cell-based interceptive medicine (2020) (1)
- Spawning induction, fertilization essays and larval development of the sea urchin Paracentrotus lividus (2018) (1)
- Chemical Composition and Omega 3 Human Health Benefits of Two Sea Cucumber Species of North Atlantic (2021) (1)
- GAMIBHEAR: whole-genome haplotype reconstruction from Genome Architecture Mapping data (2020) (1)
- Evaluating sea cucumbers as extractive species for benthic bioremediation in mussel farms (2023) (0)
- List of Participants (2012) (0)
- Effect of food density and hydrodynamic conditions on the survival and growth of the stalked barnacle Pollicipes pollicipes (2018) (0)
- Fungal and mycotoxigenic burden from feed applied in Portuguese aquaculture (2018) (0)
- Effect of a naphtha spill on Paracentrotus lividus (Lamarck, 1816): a reproductive approach (2018) (0)
- Transport and acclimation of a broodstock collection of Holothuria forskali (2018) (0)
- assay information of the mouse qualitycontrol samples for HeliScopeCAGE (2017) (0)
- Publisher Correction: Comparison of the Hi-C, GAM and SPRITE methods using polymer models of chromatin (2021) (0)
- Comparison of the Efficiency of Different Eradication Treatments to Minimize the Impacts Caused by the Invasive Tunicate Styela plicata in Mussel Aquaculture (2023) (0)
- Tolerance to captivity of a Holothuria tubulosa broodstock (2018) (0)
- Response Class Switching in a Primary T-Dependent Lymphocytes to Transfer Antigen and Initiate Dendritic Cells Interact Directly with Naive B MacPherson (1998) (0)
- Methods for mapping 3D chromosome architecture (2019) (0)
- Correction: Transcription and Chromatin Organization of a Housekeeping Gene Cluster Containing an Integrated β-Globin Locus Control Region (2008) (0)
- genomic coordinates of the human CAGE peaks (2017) (0)
- expression table of the human CAGE peaks (2017) (0)
- Flipping between Polycomb repressed and active transcriptional states introduces noise in gene expression (2017) (0)
- Nuclear factories for replication, transcription and repair (1995) (0)
- Corrigendum: Modelling the Distribution of a Commercial NE-Atlantic Sea Cucumber, Holothuria mammata: Demographic and Abundance Spatio-Temporal Patterns (2022) (0)
- Response of the marine polychaete Hediste diversicolor to controlled laboratory cadmium exposure: preliminary results (2018) (0)
- Replication and Transcription in Fibroblasts from Patients with Emery-Dreifuss Muscular Dystrophy and Familial Partial Lipodystrophy (2002) (0)
- Effects of hydrodynamic conditions and feeding period on size, growth and cirral behavior of the stalked-barnacle Pollicipes pollicipes (2019) (0)
- Evaluation of the impact caused by handling procedures on the embryonic development of the sea urchin Paracentrotus lividus (Lamarck, 1816) (2018) (0)
- Challenges and guidelines toward 4D nucleome data and model standards (2018) (0)
- genomic coordinates of the mouse CAGE peaks (2017) (0)
- Synergistic Activity of Cymbopogon citratus and Mentha piperita Essential Oils against the Pinewood Nematode (2022) (0)
- Effect of Enriched Substrate on the Growth of the Sea Cucumber Holothuria arguinensis Koehler and Vaney, 1906 Juveniles (2023) (0)
- Effect of salinity on somatic growth and gonadal enhancement of the sea urchin Paracentrotus lividus (Lamarck, 1816) (2022) (0)
- Mechanisms of gene activation by metazoan enhancers : New insights and opportunities from high-throughput approaches (2016) (0)
- Publisher Correction: LifeTime and improving European healthcare through cell-based interceptive medicine (2021) (0)
- Mechanisms of gene activation by metazoan enhancers : New insights and opportunities from high-throughput approaches (2016) (0)
- The influence of light and culture media on the growth of the red seaweed Gracilaria gracilis (Rhodophyta, Gracilariales) under laboratory conditions (2018) (0)
- Effect of temperature on gonadal growth and maturation of Paracentrotus lividus (Lamarck, 1816) (2018) (0)
- Abstract 191: Paracrine Impact of Cardiac Progenitor Cells on Macrophage Phenotypes and Human Ipsc-derived Cardiomyocyte Survival (2017) (0)
- Author Correction: Discovery of widespread transcription initiation at microsatellites predictable by sequence-based deep neural network (2022) (0)
- Polymer physics predicts the effects of structural variants on chromatin architecture (2018) (0)
- Dedicated sites of gene expression in the nuclei of mammalian cells (1998) (0)
- Forum: Phillips-Cremins and Pombo (2022) (0)
- Sensorial analysis of wild and enhanced gonads of the sea urchin Paracentrotus lividus (Lamarck, 1816) (2018) (0)
- Mechanisms of enhancer function in neuronal systems in health and disease (2022) (0)
- Transcription, Epigenetics and early Development (2021) (0)
- Polymer Models of the Chromosomes in the Nucleus of Cells (2017) (0)
- Physical and chemical tagging methods for the sea urchin Paracentrotus lividus (Echinodermata: Echinoidea) (2022) (0)
- sample information of the human samples (2017) (0)
- R-Loops Enhance Polycom b Repression at a Subset of Developmental Regulator Genes Graphical (2019) (0)
- Table of Contents (1994) (0)
- On the Nature of Chromatin 3D Organization: Lessons From Modeling (2017) (0)
- Temporal changes in sex-specific color attributes and carotenoid concentration in the gonads (roe) of the purple sea urchin (Paracentrotus lividus) provided dry feeds supplemented with β-carotene (2022) (0)
- Comparison of the Hi-C, GAM and SPRITE methods using polymer models of chromatin (2021) (0)
- Fungal diversity and mycotoxin distribution in echinoderm aquaculture (2019) (0)
- 3D genome topologies distinguish pluripotent epiblast and primitive endoderm cells in the mouse blastocyst (2022) (0)
- The status of farmed fish hearts: an alert to improve health and production in three Mediterranean species (2012) (0)
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