Andrew H Paterson
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Computer Science
Andrew H Paterson's Degrees
- PhD Computer Science Stanford University
- Masters Computer Science University of California, Berkeley
- Bachelors Computer Science University of California, Berkeley
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(Suggest an Edit or Addition)Andrew H Paterson's Published Works
Number of citations in a given year to any of this author's works
Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- MCScanX: a toolkit for detection and evolutionary analysis of gene synteny and collinearity (2012) (3052)
- The Sorghum bicolor genome and the diversification of grasses (2009) (2720)
- The tomato genome sequence provides insights into fleshy fruit evolution (2012) (2615)
- Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution (2004) (2417)
- The genome of the mesopolyploid crop species Brassica rapa (2011) (1771)
- Early allopolyploid evolution in the post-Neolithic Brassica napus oilseed genome (2014) (1641)
- Resolution of quantitative traits into Mendelian factors by using a complete linkage map of restriction fragment length polymorphisms (1988) (1551)
- RFLP Mapping in Plant Breeding: New Tools for an Old Science (1989) (1277)
- Polyploidy and angiosperm diversification. (2009) (1016)
- The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus) (2008) (1016)
- Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres (2012) (1008)
- Ancient polyploidization predating divergence of the cereals, and its consequences for comparative genomics. (2004) (934)
- Mendelian factors underlying quantitative traits in tomato: comparison across species, generations, and environments. (1991) (922)
- Synteny and Collinearity in Plant Genomes (2008) (884)
- Unravelling angiosperm genome evolution by phylogenetic analysis of chromosomal duplication events (2003) (873)
- The Brassica oleracea genome reveals the asymmetrical evolution of polyploid genomes (2014) (867)
- A rapid method for extraction of cotton (Gossypium spp.) genomic DNA suitable for RFLP or PCR analysis (1993) (662)
- Evolutionary genetics of genome merger and doubling in plants. (2008) (615)
- Convergent Domestication of Cereal Crops by Independent Mutations at Corresponding Genetic Loci (1995) (593)
- Unraveling ancient hexaploidy through multiply-aligned angiosperm gene maps. (2008) (525)
- PGDD: a database of gene and genome duplication in plants (2012) (506)
- Fine mapping of quantitative trait loci using selected overlapping recombinant chromosomes, in an interspecies cross of tomato. (1990) (498)
- Overdominant epistatic loci are the primary genetic basis of inbreeding depression and heterosis in rice. I. Biomass and grain yield. (2001) (426)
- Epistasis for three grain yield components in rice (Oryza sativa L.). (1997) (423)
- A detailed RFLP map of cotton, Gossypium hirsutum x Gossypium barbadense: chromosome organization and evolution in a disomic polyploid genome. (1994) (411)
- The pineapple genome and the evolution of CAM photosynthesis (2015) (402)
- Comparative analysis of QTLs affecting plant height and maturity across the Poaceae, in reference to an interspecific sorghum population. (1995) (399)
- Increased Food and Ecosystem Security via Perennial Grains (2010) (398)
- Construction and characterization of a bacterial artificial chromosome library of Sorghum bicolor. (1994) (377)
- A 3347-Locus Genetic Recombination Map of Sequence-Tagged Sites Reveals Features of Genome Organization, Transmission and Evolution of Cotton (Gossypium) (2004) (375)
- DNA Markers in Plant Improvement (1991) (372)
- A primitive Y chromosome in papaya marks incipient sex chromosome evolution (2004) (371)
- Transcriptome and methylome profiling reveals relics of genome dominance in the mesopolyploid Brassica oleracea (2014) (369)
- Finding and Comparing Syntenic Regions among Arabidopsis and the Outgroups Papaya, Poplar, and Grape: CoGe with Rosids1[W] (2008) (368)
- Toward Sequencing Cotton (Gossypium) Genomes (2007) (367)
- Molecular Dissection of Complex Traits (1997) (356)
- Gene duplication and evolution in recurring polyploidization–diploidization cycles in plants (2019) (353)
- SNPhylo: a pipeline to construct a phylogenetic tree from huge SNP data (2014) (353)
- Allele-defined genome of the autopolyploid sugarcane Saccharum spontaneum L. (2018) (344)
- Comparative Genomics of Plant Chromosomes (2000) (341)
- Polyploid formation created unique avenues for response to selection in Gossypium (cotton). (1998) (333)
- An SNP resource for rice genetics and breeding based on subspecies indica and japonica genome alignments. (2004) (331)
- Rate variation among nuclear genes and the age of polyploidy in Gossypium. (2003) (322)
- Physical and Genetic Structure of the Maize Genome Reflects Its Complex Evolutionary History (2007) (305)
- The pangenome of an agronomically important crop plant Brassica oleracea (2016) (294)
- QTL analysis of genotype × environment interactions affecting cotton fiber quality (2003) (288)
- Preparation of megabase‐size DNA from plant nuclei (1995) (286)
- Detailed alignment of saccharum and sorghum chromosomes: comparative organization of closely related diploid and polyploid genomes. (1998) (281)
- The genome of cultivated peanut provides insight into legume karyotypes, polyploid evolution and crop domestication (2019) (278)
- Genome of the long-living sacred lotus (Nelumbo nucifera Gaertn.) (2013) (270)
- Overdominant epistatic loci are the primary genetic basis of inbreeding depression and heterosis in rice. II. Grain yield components. (2001) (265)
- Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments (2017) (264)
- The weediness of wild plants: molecular analysis of genes influencing dispersal and persistence of johnsongrass, Sorghum halepense (L.) Pers. (1995) (263)
- Angiosperm genome comparisons reveal early polyploidy in the monocot lineage (2009) (263)
- Comparative mapping of Arabidopsis thaliana and Brassica oleracea chromosomes reveals islands of conserved organization. (1994) (260)
- QUBIC: a qualitative biclustering algorithm for analyses of gene expression data (2009) (258)
- Sequencing papaya X and Yh chromosomes reveals molecular basis of incipient sex chromosome evolution (2012) (253)
- Draft genome sequence of the mulberry tree Morus notabilis (2013) (249)
- Meta-analysis of Polyploid Cotton QTL Shows Unequal Contributions of Subgenomes to a Complex Network of Genes and Gene Clusters Implicated in Lint Fiber Development (2007) (249)
- Chromosome evolution in eukaryotes: a multi-kingdom perspective. (2005) (241)
- Comparative genetic mapping of allotetraploid cotton and its diploid progenitors (1999) (241)
- Dispersed repetitive DNA has spread to new genomes since polyploid formation in cotton. (1998) (233)
- Microsatellite identification and characterization in peanut (A. hypogaea L.) (2004) (225)
- A high-density genetic recombination map of sequence-tagged sites for sorghum, as a framework for comparative structural and evolutionary genomics of tropical grains and grasses. (2003) (212)
- Convergent evolution of perenniality in rice and sorghum (2003) (207)
- Azospirillum Genomes Reveal Transition of Bacteria from Aquatic to Terrestrial Environments (2011) (202)
- Insights from the comparison of plant genome sequences. (2010) (198)
- Application of genomics-assisted breeding for generation of climate resilient crops: progress and prospects (2015) (198)
- Genomic dissection of genotype x environment interactions conferring adaptation of cotton to arid conditions. (2001) (197)
- Integration of Cot analysis, DNA cloning, and high-throughput sequencing facilitates genome characterization and gene discovery. (2002) (193)
- Whole-genome resequencing reveals Brassica napus origin and genetic loci involved in its improvement (2019) (190)
- Integrated Syntenic and Phylogenomic Analyses Reveal an Ancient Genome Duplication in Monocots[W] (2014) (186)
- Sugarcane improvement through breeding and biotechnology (2010) (184)
- Toward a unified genetic map of higher plants, transcending the monocot–dicot divergence (1996) (183)
- Genome and gene duplications and gene expression divergence: a view from plants (2012) (182)
- Many gene and domain families have convergent fates following independent whole-genome duplication events in Arabidopsis, Oryza, Saccharomyces and Tetraodon. (2006) (181)
- Global agricultural intensification during climate change: a role for genomics (2015) (177)
- Breeding Perennial Grain Crops (2002) (175)
- Buffering of crucial functions by paleologous duplicated genes may contribute cyclicality to angiosperm genome duplication. (2006) (174)
- Draft genome of the peanut A-genome progenitor (Arachis duranensis) provides insights into geocarpy, oil biosynthesis, and allergens (2016) (170)
- The repetitive landscape of the chicken genome. (2004) (168)
- Comparative genomic analysis of C4 photosynthetic pathway evolution in grasses (2009) (166)
- Microcollinearity between autopolyploid sugarcane and diploid sorghum genomes (2010) (166)
- A global assembly of cotton ESTs. (2006) (165)
- Construction of plant bacterial artificial chromosome (BAC) libraries: an illustrated guide. (2000) (165)
- Transmission genetics of chromatin from a synthetic amphidiploid to cultivated peanut (Arachis hypogaea L.). broadening the gene pool of a monophyletic polyploid species. (2001) (164)
- Diversity and selection in sorghum: simultaneous analyses using simple sequence repeats (2005) (162)
- An EST-enriched comparative map of Brassica oleracea and Arabidopsis thaliana. (2000) (159)
- A “defeated” rice resistance gene acts as a QTL against a virulent strain of Xanthomonas oryzae pv. oryzae (1999) (158)
- Polymorphism and concerted evolution in a tandemly repeated gene family: 5S ribosomal DNA in diploid and allopolyploid cottons (1996) (158)
- Genetics of hybrid sterility and hybrid breakdown in an intersubspecific rice (Oryza sativa L.) population. (1997) (157)
- A detailed RFLP map of Sorghum bicolor x S. propinquum, suitable for high-density mapping, suggests ancestral duplication of Sorghum chromosomes or chromosomal segments (1994) (157)
- Alignment of genetic maps and QTLs between inter- and intra-specific sorghum populations (2006) (157)
- MULTILOCUS INTERACTIONS RESTRICT GENE INTROGRESSION IN INTERSPECIFIC POPULATIONS OF POLYPLOID GOSSYPIUM (COTTON) (2000) (157)
- High-Density Linkage Mapping Revealed Suppression of Recombination at the Sex Determination Locus in Papaya (2004) (154)
- Application of genotyping by sequencing technology to a variety of crop breeding programs. (2016) (150)
- Genome mapping in plants (1993) (147)
- Comparative physical mapping links conservation of microsynteny to chromosome structure and recombination in grasses. (2005) (147)
- Gene loss and silencing in Tragopogon miscellus (Asteraceae): comparison of natural and synthetic allotetraploids (2009) (141)
- Registration of 'NemaTAM' peanut (2003) (140)
- Modes of Gene Duplication Contribute Differently to Genetic Novelty and Redundancy, but Show Parallels across Divergent Angiosperms (2011) (140)
- Comparative Population Genetics of the Panicoid Grasses: Sequence Polymorphism, Linkage Disequilibrium and Selection in a Diverse Sample of Sorghum bicolor (2004) (135)
- Genetic dissection of cotton physiological responses to arid conditions and their inter‐relationships with productivity (2004) (133)
- Characterization of RFLP probe sequences for gene discovery and SSR development in Sorghum bicolor (L.) Moench (2002) (132)
- Sequencing of Cultivated Peanut, Arachis hypogaea, Yields Insights into Genome Evolution and Oil Improvement. (2019) (131)
- Screening synteny blocks in pairwise genome comparisons through integer programming (2011) (130)
- Genetic improvement of C4 grasses as cellulosic biofuel feedstocks (2009) (129)
- Genetic dissection of the source-sink relationship affecting fecundity and yield in rice (shape Oryza sativa L.) (1998) (129)
- Grains of knowledge: genomics of model cereals. (2005) (128)
- Molecular mapping of genes conferring aluminum tolerance in rice (Oryza sativa L.) (2001) (128)
- Molecular dissection of quantitative traits: progress and prospects. (1995) (127)
- Genomics of Sorghum (2008) (126)
- Gene actions of QTLs affecting several agronomic traits resolved in a recombinant inbred rice population and two testcross populations (2003) (124)
- Genetic, Physical, and Informatics Resources for Maize. On the Road to an Integrated Map1 (2002) (123)
- D-subgenome bias of Xcm resistance genes in tetraploid Gossypium (cotton) suggests that polyploid formation has created novel avenues for evolution. (1998) (120)
- Molecular Mapping of Plant Chromosomes (1988) (120)
- Access to the maize genome: an integrated physical and genetic map. (2002) (117)
- Comparative Analysis between Homoeologous Genome Segments of Brassica napus and Its Progenitor Species Reveals Extensive Sequence-Level Divergence[W][OA] (2009) (117)
- Emergence of a group 3 coronavirus through recombination (2009) (117)
- An integrated approach to maintaining cereal productivity under climate change (2016) (112)
- Mapping of genes controlling aluminum tolerance in rice: comparison of different genetic backgrounds (2002) (111)
- Building the sugarcane genome for biotechnology and identifying evolutionary trends (2014) (111)
- Mapping of four major rice blast resistance genes from ’Lemont’ and ’Teqing’ and evaluation of their combinatorial effect for field resistance (2000) (111)
- Sex chromosomes in flowering plants. (2007) (109)
- A Comparative Genomics Strategy for Targeted Discovery of Single-Nucleotide Polymorphisms and Conserved-Noncoding Sequences in Orphan Crops1[W] (2006) (107)
- Genome Alignment Spanning Major Poaceae Lineages Reveals Heterogeneous Evolutionary Rates and Alters Inferred Dates for Key Evolutionary Events. (2015) (105)
- What has QTL mapping taught us about plant domestication? (2002) (104)
- Structure and evolution of cereal genomes. (2003) (103)
- Genetic mapping and comparative analysis of seven mutants related to seed fiber development in cotton (2005) (102)
- Molecular dissection of interspecific variation between Gossypium hirsutum and Gossypium barbadense (cotton) by a backcross-self approach: I. Fiber elongation (2005) (101)
- Challenges of Detecting Directional Selection After a Bottleneck: Lessons From Sorghum bicolor (2006) (100)
- MCScanX-transposed: detecting transposed gene duplications based on multiple colinearity scans (2013) (100)
- Genome and evolution of the shade‐requiring medicinal herb Panax ginseng (2018) (99)
- Domestication and plant genomes. (2010) (99)
- A detailed look at 7 million years of genome evolution in a 439 kb contiguous sequence at the barley Hv-eIF4E locus: recombination, rearrangements and repeats. (2004) (98)
- Pedigree‐ vs. DNA Marker‐Based Genetic Similarity Estimates in Cotton (2005) (96)
- Leafing through the genomes of our major crop plants: strategies for capturing unique information (2006) (95)
- Crop‐to‐weed introgression has impacted allelic composition of johnsongrass populations with and without recent exposure to cultivated sorghum (2005) (95)
- Identification of peanut (Arachis hypogaea L.) RAPD markers diagnostic of root-knot nematode (Meloidogyne arenaria (Neal) Chitwood) resistance (1996) (93)
- Polyploidy, evolutionary opportunity, and crop adaptation (2005) (93)
- The Sugarcane Genome Challenge: Strategies for Sequencing a Highly Complex Genome (2011) (93)
- Incongruent patterns of local and global genome size evolution in cotton. (2004) (92)
- Investigation of genomic organization in switchgrass (Panicum virgatum L.) using DNA markers (2005) (90)
- Molecular dissection of phenotypic variation between Gossypium hirsutum and Gossypium barbadense (cotton) by a backcross-self approach: III. Fiber length (2005) (90)
- RFLP facilitated analysis of tiller and leaf angles in rice (Oryza sativa L.) (1999) (89)
- Molecular dissection of interspecific variation between Gossypium hirsutum and G. barbadense (cotton) by a backcross-self approach: II. Fiber fineness (2005) (89)
- Brassica genomics: a complement to, and early beneficiary of, the Arabidopsis sequence (2001) (88)
- Extensive Concerted Evolution of Rice Paralogs and the Road to Regaining Independence (2007) (88)
- Equilibrium Processes Cannot Explain High Levels of Short- and Medium-Range Linkage Disequilibrium in the Domesticated Grass Sorghum bicolor (2005) (88)
- Recombination in Avian Gamma-Coronavirus Infectious Bronchitis Virus (2011) (88)
- A physical map of the papaya genome with integrated genetic map and genome sequence (2009) (88)
- Toward integration of comparative genetic, physical, diversity, and cytomolecular maps for grasses and grains, using the sorghum genome as a foundation. (2001) (87)
- In-field High Throughput Phenotyping and Cotton Plant Growth Analysis Using LiDAR (2018) (86)
- Molecular mapping of genes affecting pubescence of cotton (1999) (85)
- Plant-pathogen microevolution: molecular basis for the origin of a fungal disease in maize. (1998) (85)
- Construction of genetic map and QTL analysis of fiber quality traits for Upland cotton (Gossypium hirsutum L.) (2014) (85)
- High throughput phenotyping of cotton plant height using depth images under field conditions (2016) (84)
- Functional genomics of drought stress response in rice: transcript mapping of annotated unigenes of an indica rice (Oryza sativa L. cv. Nagina 22) (2005) (81)
- Chromosomal location and gene paucity of the male specific region on papaya Y chromosome (2007) (81)
- Comparative Analysis between Homoeologous Genome Segments of Brassica napus and Its Progenitor Species Reveals Extensive Sequence-Level Divergence (2009) (81)
- Molecular Markers for the Classification of Switchgrass (Panicum virgatum L.) Germplasm and to Assess Genetic Diversity in Three Synthetic Switchgrass Populations (2006) (80)
- Microcolinearity and genome evolution in the AdhA region of diploid and polyploid cotton (Gossypium). (2007) (80)
- Polyploidy-associated genome modifications during land plant evolution (2014) (80)
- Comparative inference of illegitimate recombination between rice and sorghum duplicated genes produced by polyploidization. (2009) (79)
- Hierarchically Aligning 10 Legume Genomes Establishes a Family-Level Genomics Platform1[OPEN] (2017) (79)
- Low X/Y divergence in four pairs of papaya sex-linked genes. (2008) (79)
- Genome-wide high-resolution mapping by recurrent intermating using Arabidopsis thaliana as a model. (1996) (78)
- Molecular breeding of groundnut for enhanced productivity and food security in the semi- arid tropics: opportunities and challenges (2003) (77)
- Comparative mapping of quantitative trait loci sculpting the curd of Brassica oleracea. (2000) (77)
- Seventy Million Years of Concerted Evolution of a Homoeologous Chromosome Pair, in Parallel, in Major Poaceae Lineages[W] (2011) (76)
- Chromosome structural changes in diploid and tetraploid A genomes of Gossypium. (2006) (76)
- Sorghum Expressed Sequence Tags Identify Signature Genes for Drought, Pathogenesis, and Skotomorphogenesis from a Milestone Set of 16,801 Unique Transcripts1[w] (2005) (73)
- Comparative analysis of QTLs affecting plant height and flowering among closely-related diploid and polyploid genomes. (2002) (71)
- Efficient capture of unique sequences from eukaryotic genomes. (2002) (71)
- Different patterns of gene structure divergence following gene duplication in Arabidopsis (2013) (71)
- Nelumbo nucifera [data set] (2013) (70)
- Ancient Gene Duplicates in Gossypium (Cotton) Exhibit Near-Complete Expression Divergence (2014) (68)
- Comparative Analysis of Miscanthus and Saccharum Reveals a Shared Whole-Genome Duplication but Different Evolutionary Fates[W] (2014) (68)
- Genetics and genomics of cotton (2009) (68)
- In-Field High-Throughput Phenotyping of Cotton Plant Height Using LiDAR (2017) (67)
- Cotton genetic resources. A review (2012) (66)
- Recent Origin of Dioecious and Gynodioecious Y Chromosomes in Papaya (2008) (65)
- Comparative genomics of Gossypium and Arabidopsis: unraveling the consequences of both ancient and recent polyploidy. (2005) (65)
- Comparative Analysis of Serine/Arginine-Rich Proteins across 27 Eukaryotes: Insights into Sub-Family Classification and Extent of Alternative Splicing (2011) (64)
- Genetic analysis of inflorescence and plant height components in sorghum (Panicoidae) and comparative genetics with rice (Oryzoidae) (2015) (64)
- Field evaluation of cotton near-isogenic lines introgressed with QTLs for productivity and drought related traits (2009) (63)
- Assembly of the 373k gene space of the polyploid sugarcane genome reveals reservoirs of functional diversity in the world's leading biomass crop (2019) (62)
- SSR-based genetic maps of Miscanthus sinensis and M. sacchariflorus, and their comparison to sorghum (2012) (62)
- Aerial Images and Convolutional Neural Network for Cotton Bloom Detection (2018) (62)
- Functional Classification, Genomic Organization, Putatively cis-Acting Regulatory Elements, and Relationship to Quantitative Trait Loci, of Sorghum Genes with Rhizome-Enriched Expression1[W] (2006) (61)
- Rapid divergence and expansion of the X chromosome in papaya (2012) (61)
- Assessment of DNA pooling strategies for mapping of QTLs (1994) (61)
- Reducing the Genetic Vulnerability of Cotton (2004) (60)
- Construction of a Saccharum Consensus Genetic Map from Two Interspecific Crosses (2002) (60)
- Sugarcane: The Crop, the Plant, and Domestication (2013) (60)
- The Genome of a Southern Hemisphere Seagrass Species (Zostera muelleri)1[OPEN] (2016) (59)
- Carbon isotope ratio in cotton varies with growth stage and plant organ (1999) (58)
- Parallel up-regulation of the profilin gene family following independent domestication of diploid and allopolyploid cotton (Gossypium) (2011) (58)
- METHODS OF EVALUATION FOR PREHARVEST SPROUTING RESISTANCE IN WHEAT BREEDING PROGRAMS (1989) (57)
- Characterization of tissue tolerance to iron by molecular markers in different lines of rice (1998) (57)
- DeepSeedling: deep convolutional network and Kalman filter for plant seedling detection and counting in the field (2019) (56)
- QTL mapping of naturally-occurring variation in flowering time of Arabidopsis thaliana (1994) (56)
- Genetics and Mechanism of Resistance to Meloidogyne arenaria in Peanut Germplasm. (1999) (55)
- Attenuated live vaccine usage affects accurate measures of virus diversity and mutation rates in avian coronavirus infectious bronchitis virus (2011) (55)
- Toward Sequencing the Sorghum Genome. A U.S. National Science Foundation-Sponsored Workshop Report[w] (2005) (54)
- Seed shattering in a wild sorghum is conferred by a locus unrelated to domestication (2013) (53)
- A draft physical map of a D-genome cotton species (Gossypium raimondii) (2010) (53)
- Genetic map and QTL controlling fiber quality traits in upland cotton (Gossypium hirsutum L.) (2015) (53)
- Metabolite and mineral analyses of cotton near-isogenic lines introgressed with QTLs for productivity and drought-related traits. (2011) (52)
- EST derived PCR-based markers for functional gene homologues in cotton. (2004) (52)
- Construction of physical maps for the sex-specific regions of papaya sex chromosomes (2012) (51)
- Gene body methylation shows distinct patterns associated with different gene origins and duplication modes and has a heterogeneous relationship with gene expression in Oryza sativa (rice). (2013) (51)
- Telomere-centric genome repatterning determines recurring chromosome number reductions during the evolution of eukaryotes. (2015) (51)
- GPhenoVision: A Ground Mobile System with Multi-modal Imaging for Field-Based High Throughput Phenotyping of Cotton (2018) (49)
- A phylogenetic analysis of indel dynamics in the cotton genus. (2008) (49)
- Comparative genomic de-convolution of the cotton genome revealed a decaploid ancestor and widespread chromosomal fractionation. (2016) (48)
- Matita, a new retroelement from peanut: characterization and evolutionary context in the light of the Arachis A–B genome divergence (2011) (48)
- Analysis of the Complete Mitochondrial Genome Sequence of the Diploid Cotton Gossypium raimondii by Comparative Genomics Approaches (2016) (48)
- Organization and evolution of resistance gene analogs in peanut (2005) (47)
- Photosynthesis of cotton near-isogenic lines introgressed with QTLs for productivity and drought related traits (2009) (47)
- QTL alleles for improved fiber quality from a wild Hawaiian cotton, Gossypium tomentosum (2011) (47)
- Ancient duplication of cereal genomes. (2005) (47)
- Sixty million years in evolution of soft grain trait in grasses: emergence of the softness locus in the common ancestor of Pooideae and Ehrhartoideae, after their divergence from Panicoideae. (2009) (46)
- Development of genomic resources for cotton (Gossypium hirsutum L.): BAC library construction, preliminary STC analysis, and identification of clones associated with fiber development (2001) (46)
- A Recommendation for Naming Transcription Factor Proteins in the Grasses (2009) (45)
- Comparative analysis of peanut NBS-LRR gene clusters suggests evolutionary innovation among duplicated domains and erosion of gene microsynteny. (2011) (45)
- Use of RFLP markers for identification of individuals homozygous for resistance to Meloidogyne arenaria in peanut (2000) (45)
- Gene Conversion in Angiosperm Genomes with an Emphasis on Genes Duplicated by Polyploidization (2011) (45)
- Extensive and Biased Intergenomic Nonreciprocal DNA Exchanges Shaped a Nascent Polyploid Genome, Gossypium (Cotton) (2014) (45)
- Function Relaxation Followed by Diversifying Selection after Whole-Genome Duplication in Flowering Plants1[C][W] (2013) (44)
- Segmental allotetraploidy and allelic interactions in buffelgrass (Pennisetum ciliare (L.) Link syn. Cenchrus ciliaris L.) as revealed by genome mapping. (2003) (44)
- Multispectral imaging and unmanned aerial systems for cotton plant phenotyping (2019) (44)
- Inheritance of Grain Dormacy in White‐Kernelled Wheat (1990) (44)
- Erratum: Toward a unified genetic map of higher plants, transcending the monocot–dicot divergence (1997) (44)
- Disomic inheritance, suppressed recombination, and allelic interactions govern apospory in buffelgrass as revealed by genome mapping (2002) (44)
- Micro-collinearity and genome evolution in the vicinity of an ethylene receptor gene of cultivated diploid and allotetraploid coffee species (Coffea). (2011) (43)
- Molecular Analysis of Sorghum Resistance to the Greenbug (Homoptera: Aphididae) (2002) (42)
- Joint QTL mapping and transcriptome sequencing analysis reveal candidate flowering time genes in Brassica napus L (2019) (42)
- A physical map for the Amborella trichopoda genome sheds light on the evolution of angiosperm genome structure (2011) (42)
- Genetic mapping of a cross between Gossypium hirsutum (cotton) and the Hawaiian endemic, Gossypium tomentosum (2005) (42)
- Comparative genome analysis of monocots and dicots, toward characterization of angiosperm diversity. (2004) (41)
- Identifying QTL for fiber quality traits with three upland cotton (Gossypium hirsutum L.) populations (2014) (41)
- Deciphering the high‐quality genome sequence of coriander that causes controversial feelings (2019) (41)
- Molecular biogeographic study of recently described B- and A-genome Arachis species, also providing new insights into the origins of cultivated peanut. (2009) (41)
- The distribution of Gossypium hirsutum chromatin in G. barbadense germ plasm: molecular analysis of introgressive plant breeding (1995) (41)
- Complexity of genome evolution by segmental rearrangement in Brassica rapa revealed by sequence-level analysis (2009) (40)
- Three-dimensional photogrammetric mapping of cotton bolls in situ based on point cloud segmentation and clustering (2020) (40)
- The molecular basis of C4 photosynthesis in sorghum: isolation, characterization and RFLP mapping of mesophyll- and bundle-sheath-specific cDNAs obtained by differential screening (1998) (40)
- Comparative Genetics of Seed Size Traits in Divergent Cereal Lineages Represented by Sorghum (Panicoidae) and Rice (Oryzoidae) (2015) (39)
- Comparison of RAPD marker patterns to morphological and physiological data in the classification of Opuntia accessions (1998) (39)
- Construction and characterization of a peanut HindIII BAC library (2005) (39)
- Development of Perennial Grain Sorghum (2018) (39)
- Comparative mapping of QTLs determining the plant size of Brassica oleracea (2001) (39)
- A Whole-Genome DNA Marker Map for Cotton Based on the D-Genome Sequence of Gossypium raimondii L. (2013) (38)
- Evolutionary fate of rhizome-specific genes in a non-rhizomatous Sorghum genotype (2009) (38)
- Genome sequence and evolution of Betula platyphylla (2021) (37)
- The celery genome sequence reveals sequential paleo‐polyploidizations, karyotype evolution and resistance gene reduction in apiales (2020) (36)
- Introgression of homeologous quantitative trait loci (QTLs) for resistance to the root-knot nematode [Meloidogyne arenaria (Neal) Chitwood] in an advanced backcross-QTL population of peanut (Arachis hypogaea L.) (2014) (36)
- A comparative phylogenetic approach for dating whole genome duplication events (2004) (36)
- A Sorghum propinquum BAC library, suitable for cloning genes associated with loss-of-function mutations during crop domestication (1999) (35)
- The repetitive component of the A genome of peanut (Arachis hypogaea) and its role in remodelling intergenic sequence space since its evolutionary divergence from the B genome. (2013) (35)
- The Gene Pool of Saccharum Species and Their Improvement (2013) (35)
- The Evolution of Photoperiod-Insensitive Flowering in Sorghum, A Genomic Model for Panicoid Grasses (2016) (35)
- Genetic and transcriptomic analyses of lignin- and lodging-related traits in Brassica napus (2017) (34)
- Analysis of Crystallinity Index and Hydrolysis Rates in the Bioenergy Crop Sorghum bicolor (2012) (34)
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- Genetic diversity, population structure and selection signature in Ethiopian Sorghum (Sorghum bicolor L. [Moench]) germplasm (2021) (6)
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- Construction of genetic map and QTL analysis of fiber quality traits for Upland cotton (Gossypium hirsutum L.) (2014) (1)
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- Gene duplication and evolution in recurring polyploidization–diploidization cycles in plants (2019) (1)
- Comparative evolution of vegetative branching in sorghum (2021) (1)
- Physical Composition and Organization of the Gossypium Genomes (2009) (1)
- Construction of physical maps for the sex-specific regions of papaya sex chromosomes (2012) (1)
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- The genome of cultivated peanut provides insight into legume karyotypes, polyploid evolution and crop domestication (2019) (1)
- Differentiation in the genetic basis of stem trichome development between cultivated tetraploid cotton species (2021) (1)
- Advancing the Productivity Frontier for Sorghum (2014) (1)
- Association analysis of photoperiodic flowering time genes in west and central African sorghum [Sorghum bicolor (L.) Moench] (2012) (1)
- Comparative Genomics of Grasses: A Saccharinae-Centric View (2013) (1)
- Building the sugarcane genome for biotechnology and identifying evolutionary trends (2014) (1)
- Cot-based sampling of genomes for polymorphic low-copy DNA (2013) (1)
- Cotton flower detection using aerial color images (2017) (1)
- Genetic variation underlying kernel size, shape, and color in two interspecific S. bicolor2 × S. halepense subpopulations (2021) (1)
- Plant Genome Mapping : Strategies and Applications (2011) (1)
- Perennial Questions of Hydrology and Climate Response (2010) (1)
- QTL analysis in multiple sorghum mapping populations facilitates dissection of the genetic control of agronomic and yield-related traits in sorghum [Sorghum bicolor (Moench)] (2021) (1)
- The repetitive landscape of the chicken genome Material Supplemental (2016) (1)
- Biofuel and energy crops: high-yield Saccharinae take center stage in the post-genomics era (2013) (1)
- Cotton Yield Estimation From Aerial Imagery Using Machine Learning Approaches (2022) (1)
- Registration of eight upland cotton (Gossypium hirsutumL.) germplasm lines withqFL‐Chr.25, a fiber‐length QTL introgressed fromGossypium barbadense (2020) (1)
- Publisher Correction: Allele-defined genome of the autopolyploid sugarcane Saccharum spontaneum L (2018) (1)
- Identification of small effect quantitative trait loci of plant architectural, flowering, and early maturity traits in reciprocal interspecific introgression population in cotton (2022) (1)
- SSR-based genetic maps of Miscanthus sinensis and M. sacchariflorus, and their comparison to sorghum (2012) (1)
- Exploiting genetic variation from unadapted germplasm—An example from improvement of sorghum in Ethiopia (2022) (1)
- A GCP Challenge Initiative: Drought Tolerance Improvement for Sorghum in Africa (2010) (1)
- Registration of GA R01-40-08, aGossypium hirsutumUpland Cotton Germplasm Line withqFL-Chr.1Introgressed fromGossypium barbadenseConferring Improved Fiber Length (2019) (1)
- Two Paleo-Hexaploidies Underlie Formation of Modern Solanaceae Genome Structure (2016) (1)
- The hairless stem phenotype of cotton (G. barbadense) is linked to a copia-like retrotransposon insertion in homeodomain leucine zipper gene (HD1) (2015) (1)
- Analysis of Crystallinity Index and Hydrolysis Rates in the Bioenergy Crop Sorghum bicolor (2011) (0)
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- Mini Core Germplasm Collections for Developing Climate Resilient Crop Cultivars and Achieving Enhanced Genetic Gains in Plant Breeding Programs (2022) (0)
- Deciphering drought genomics: Integrating rice and maize phenotype data on the rice genome backbone (2008) (0)
- Sequencing of transcriptomes from two Miscanthus species reveals functional specificity in rhizomes, and clarifies evolutionary relationships (2014) (0)
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- Capturing the Spectrum of Diversity in the Gossypium Genus (2013) (0)
- Genetic analysis of vegetative branching in sorghum (2014) (0)
- Genome Mapping and Marker-Assisted Selection for Improving Cotton (Gossypium Spp.) Productivity and Quality in Arid Regions (2004) (0)
- QTL analysis of cotton fiber length in advanced backcross populations derived from a cross between Gossypium hirsutum and G. mustelinum (2017) (0)
- Genetic map and QTL controlling fiber quality traits in upland cotton (Gossypium hirsutum L.) (2014) (0)
- Fine mapping and candidate gene analysis of qFL-chr1, a fiber length QTL in cotton (2017) (0)
- Cot-based sampling of genomes for polymorphic low-copy DNA (2013) (0)
- Evaluation and Genetic Analysis of a Segregating Sorghum Population under Moisture Stress Conditions (2019) (0)
- Applying the Reference Genome to Cotton Breeding (2014) (0)
- Unraveling the genetic components of perenniality: Toward breeding for perennial grains (2022) (0)
- Marker assisted selection in agriculture (2013) (0)
- Identification of RLGS spots by in silico RLGS analysis (2006) (0)
- Synthesis: Fundamental Insights and Practical Applications from the Saccharinae Clade (2013) (0)
- Aerial and ground robot high-throughput phenotyping for in-field cotton boll detection (2018) (0)
- Identification of bioconversion quantitative trait loci in the interspecific cross Sorghum bicolor × Sorghum propinquum (2013) (0)
- Comparative genetic variation of fiber quality traits in reciprocal advanced backcross populations (2017) (0)
- Molecular genetic map of cotton (2001) (0)
- Harnessing Sorghum Diversity to Advance Food Security (2014) (0)
- Toward Characterizing the Spectrum of Diversity in the Gossypium Genus (2009) (0)
- Digital Commons@Becker Digital Commons@Becker The repetitive landscape of the chicken genome The repetitive landscape of the chicken genome (2022) (0)
- New adaptive peaks for crops – an example from improvement of drought-resilience of sorghum in Ethiopia (2021) (0)
- EMS-mutated cotton populations suggest overlapping genetic control of trichome and lint fiber variation (2015) (0)
- Targeted identification of association between cotton fiber quality traits and microsatellite markers (2017) (0)
- Toward Production Systems Incorporating Ratooning/Perennial Grain Crops (2016) (0)
- A genome-wide BAC end-sequence survey of sugarcane elucidates genome composition, and identifies BACs covering much of the euchromatin (2012) (0)
- Automated plant node detection using terrestrial LiDAR data under field conditions (2019) (0)
- Improving Productivity of Cotton (Gossypsum spp.) in Arid Region Agriculture: An Integrated Physiological/Genetic Approach (1999) (0)
- Transcriptome and methylome profiling reveals relics of genome dominance in the mesopolyploid Brassica oleracea (2014) (0)
- Detection of quantitative trait loci regulating seed yield potential in two interspecific S. bicolor2 × S. halepense subpopulations (2021) (0)
- Genetic variation underlying kernel size, shape, and color in two interspecific S. bicolor2 × S. halepense subpopulations (2021) (0)
- Matita, a new retroelement from peanut: characterization and evolutionary context in the light of the Arachis A–B genome divergence (2011) (0)
- Number : 1800677 3 D computer vision and machine learning based technique for high throughput cotton boll mapping under field conditions (2018) (0)
- A global assembly of cotton ESTs Material Supplemental (2006) (0)
- Ancient Polyploidy and Modem Crop Plants (2007) (0)
- Genomics of Crop Ecosystem Services (2018) (0)
- The Importance of Gene Conversion in Flowering Plants (2016) (0)
- Comparative transmission genetics of introgressed chromatin in reciprocal advanced backcross populations in Gossypium (cotton) polyploids (2023) (0)
- Mark E. Sorrells (2018) (0)
- Peanut.Chapter 3 (2007) (0)
- The smallest Gossypium genome as a reference for the genus (2013) (0)
- 6 Quantitative Genetics (1994) (0)
- Revealing angiosperm diversity, toward a "Gene Revolution" (2005) (0)
- Sugarcane is an Ancient Allopolyploid (2016) (0)
- High proportion of diploid hybrids produced by interspecific diploid × tetraploid Sorghum hybridization (2017) (0)
- The Post-Genomic Era for Cotton (2013) (0)
- Segregation distortion and genome-wide digenic interactions affect transmission of introgressed chromatin from wild cotton species (2017) (0)
- Alleles conferring improved fiber quality from EMS mutagenesis of elite cotton genotypes (2013) (0)
- Update on Map Resources for Maize Genetic , Physical , and Informatics Resources for Maize . On the Road to an Integrated Map 1 (2002) (0)
- Comparative Molecular and Phenotypic Evolution of Brassica Oleracea and Arabidopsis Thaliana (1998) (0)
- Preferential insertion of a Ty1 LTR-retrotransposon into the A sub-genome’s HD1 gene significantly correlated with the reduction in stem trichomes of tetraploid cotton (2019) (0)
- Joint QTL mapping and transcriptome sequencing analysis reveal candidate flowering time genes in Brassica napus L (2019) (0)
- Comprar Genetics and Genomics of Cotton | Paterson, Andrew H. | 9780387708096 | Springer (2008) (0)
- Concerted Evolution of Subgenomes in Polyploids (2015) (0)
- Identifying QTL for fiber quality traits with three upland cotton (Gossypium hirsutum L.) populations (2014) (0)
- Accelerating the domestication of Miscanthus for biofuel production (2014) (0)
- RFLP mapping of a cross between Sorghum Bicolor and. S.propinquum, suitable for high-density mapping, suggests ancestral duplication of Sorghum chromosomes (2019) (0)
- Cross-taxon application of sugarcane EST-SSR to genetic diversity analysis of bermudagrass (Cynodon spp.) (2017) (0)
- Fine mapping and identification of candidate genes for a QTL affecting Meloidogyne incognita reproduction in Upland cotton (2016) (0)
- sorghum (Panicoidae) and rice (Oryzoidae) (2015) (0)
- Author ' s personal copy Comparative analysis of Gossypium and Vitis genomes indicates genome duplication speci fi c to the Gossypium lineage (2011) (0)
- Cotton genetic resources. A review (2011) (0)
- Marker-assisted selection for improving drought resistance in cotton. (2011) (0)
- SSR-enriched genetic linkage maps of bermudagrass (Cynodon dactylon × transvaalensis), and their comparison with allied plant genomes (2017) (0)
- Genome of papaya, a fast growing tropical fruit tree (2012) (0)
- The greening of genomics (2008) (0)
- Changes in nonstructural protein 3 are associated with attenuation in avian coronavirus infectious bronchitis virus (2011) (0)
- Different patterns of gene structure divergence following gene duplication in Arabidopsis (2013) (0)
- ISPMB news New president-elect and ISPMB elections (2007) (0)
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What Schools Are Affiliated With Andrew H Paterson?
Andrew H Paterson is affiliated with the following schools:
