Anne D. Yoder
American biologist, researcher, and professor
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Biology
Anne D. Yoder's Degrees
- Bachelors Biology University of California, Santa Cruz
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(Suggest an Edit or Addition)According to Wikipedia, Anne Daphne Yoder is an American biologist, researcher, and professor in the Department of Biology at Duke University in Durham, North Carolina, United States. Yoder's work includes the study, preservation, and conservation of the multifarious biodiversity found in Madagascar. One of her main research topics focuses on the diverse lemur population found on the island. Specifically, Yoder's research concentrates on assorted geographic factors that lead to varying levels of biological differences in the speciation process. Her investigations utilize genome research to further understand the complex and unique degree of speciation that occurs in lemur populations. In 2023, she was elected to the National Academy of Sciences.
Anne D. Yoder's Published Works
Published Works
- Phylogeography's past, present, and future: 10 years after Avise, 2000. (2010) (569)
- Estimation of primate speciation dates using local molecular clocks. (2000) (462)
- Has Vicariance or Dispersal Been the Predominant Biogeographic Force in Madagascar? Only Time Will Tell (2006) (459)
- Failure of the ILD to determine data combinability for slow loris phylogeny. (2001) (418)
- Comparison of likelihood and Bayesian methods for estimating divergence times using multiple gene Loci and calibration points, with application to a radiation of cute-looking mouse lemur species. (2003) (342)
- Divergence dates for Malagasy lemurs estimated from multiple gene loci: geological and evolutionary context (2004) (298)
- Single origin of Malagasy Carnivora from an African ancestor (2003) (274)
- Ancient single origin for Malagasy primates. (1996) (257)
- Remarkable species diversity in Malagasy mouse lemurs (primates, Microcebus). (2000) (229)
- Estimation of the Transition/Transversion Rate Bias and Species Sampling (1999) (213)
- Development and application of a phylogenomic toolkit: resolving the evolutionary history of Madagascar's lemurs. (2008) (206)
- Integrating statistical genetic and geospatial methods brings new power to phylogeography. (2011) (196)
- Delimiting Species without Nuclear Monophyly in Madagascar's Mouse Lemurs (2010) (153)
- The Phylogeny of Rosoideae (Rosaceae) Based on Sequences of the Internal Transcribed Spacers (ITS) of Nuclear Ribosomal DNA and the trnL/F Region of Chloroplast DNA (2003) (150)
- Relative position of the Cheirogaleidae in strepsirhine phylogeny: a comparison of morphological and molecular methods and results. (1994) (146)
- Evidence from opsin genes rejects nocturnality in ancestral primates. (2005) (146)
- Comparative RNA sequencing reveals substantial genetic variation in endangered primates. (2012) (139)
- The role of molecular genetics in sculpting the future of integrative biogeography (2008) (138)
- Back to the future: A synthesis of strepsirrhine systematics (1997) (130)
- Using Phylogenomic Data to Explore the Effects of Relaxed Clocks and Calibration Strategies on Divergence Time Estimation: Primates as a Test Case (2017) (118)
- Molecular evolutionary dynamics of cytochrome b in strepsirrhine primates: the phylogenetic significance of third-position transversions. (1996) (108)
- Species discovery and validation in a cryptic radiation of endangered primates: coalescent‐based species delimitation in Madagascar's mouse lemurs (2016) (104)
- Cranial anatomy of Ignacius graybullianus and the affinities of the Plesiadapiformes (1992) (99)
- Shifting ranges and conservation challenges for lemurs in the face of climate change (2015) (99)
- Molecular Evidence of Reproductive Isolation in Sympatric Sibling Species of Mouse Lemurs (2002) (99)
- Ancient DNA from giant extinct lemurs confirms single origin of Malagasy primates. (2005) (98)
- A multidimensional approach for detecting species patterns in Malagasy vertebrates (2005) (97)
- A necessarily complex model to explain the biogeography of the amphibians and reptiles of Madagascar (2014) (94)
- Tropical heterothermy is “cool”: The expression of daily torpor and hibernation in primates (2018) (84)
- Alteration of the rat cecal microbiome during colonization with the helminth Hymenolepis diminuta (2015) (84)
- Concatenation and concordance in the reconstruction of mouse lemur phylogeny: an empirical demonstration of the effect of allele sampling in phylogenetics. (2012) (81)
- Illumination of cryptic species boundaries in long-tailed shrew tenrecs (Mammalia: Tenrecidae; Microgale), with new insights into geographic variation and distributional constraints (2004) (81)
- Molecular Evolutionary Characterization of a V1R Subfamily Unique to Strepsirrhine Primates (2014) (79)
- What is Speciation Genomics? The roles of ecology, gene flow, and genomic architecture in the formation of species (2018) (77)
- Geogenetic patterns in mouse lemurs (genus Microcebus) reveal the ghosts of Madagascar's forests past (2016) (76)
- Multiple nuclear loci reveal patterns of incomplete lineage sorting and complex species history within western mouse lemurs (Microcebus). (2007) (74)
- Comparative and population mitogenomic analyses of Madagascar's extinct, giant 'subfossil' lemurs. (2015) (74)
- Phylogeny of the Lemuridae: Effects of Character and Taxon Sampling on Resolution of Species Relationships within Eulemur☆ (1999) (71)
- Hybrid de novo genome assembly and centromere characterization of the gray mouse lemur (Microcebus murinus) (2017) (69)
- The ecosystem services of animal microbiomes (2018) (68)
- CITES Designation for Endangered Rosewood in Madagascar (2010) (64)
- Life history profiles for 27 strepsirrhine primate taxa generated using captive data from the Duke Lemur Center (2014) (62)
- Climate change, predictive modeling and lemur health: Assessing impacts of changing climate on health and conservation in Madagascar (2013) (62)
- Underground hibernation in a primate (2013) (59)
- Mouse Lemur Phylogeography Revises a Model of Ecogeographic Constraint in Madagascar (2006) (59)
- Expression and Trans-Specific Polymorphism of Self-Incompatibility RNases in Coffea (Rubiaceae) (2011) (59)
- Effects of anthropogenic disturbance on indri (Indri indri) health in Madagascar (2011) (59)
- The Earth BioGenome Project 2020: Starting the clock (2022) (58)
- Patterns of Gut Bacterial Colonization in Three Primate Species (2015) (57)
- The utility of PacBio circular consensus sequencing for characterizing complex gene families in non-model organisms (2014) (52)
- Species delimitation in lemurs: multiple genetic loci reveal low levels of species diversity in the genus Cheirogaleus (2009) (51)
- Discovery of prosimian and afrotherian foamy viruses and potential cross species transmissions amidst stable and ancient mammalian co-evolution (2014) (51)
- Extinction Risks and the Conservation of Madagascar's Reptiles (2014) (50)
- Using secondary structure to identify ribosomal numts: cautionary examples from the human genome. (2002) (49)
- Warning SINEs: Alu elements, evolution of the human brain, and the spectrum of neurological disease (2018) (47)
- A New Species of Emballonura (Chiroptera: Emballonuridae) from the Dry Regions of Madagascar (2006) (45)
- Implications of lemuriform extinctions for the Malagasy flora (2016) (44)
- The Alu neurodegeneration hypothesis: A primate-specific mechanism for neuronal transcription noise, mitochondrial dysfunction, and manifestation of neurodegenerative disease (2017) (43)
- Multiple colonisations of the western Indian Ocean by Pteropus fruit bats (Megachiroptera: Pteropodidae): the furthest islands were colonised first. (2009) (42)
- Two New Species of Mouse Lemurs (Cheirogaleidae: Microcebus) from Eastern Madagascar (2013) (42)
- Phylogeny and biogeography of western Indian Ocean Rousettus (Chiroptera: Pteropodidae) (2010) (41)
- Down for the count: Cryptosporidium infection depletes the gut microbiome in Coquerel’s sifakas (2017) (40)
- Phylogeny and evolution of Malagasy plated lizards. (2009) (38)
- Cryptic patterns of speciation in cryptic primates: microendemic mouse lemurs and the multispecies coalescent (2019) (38)
- Anonymous nuclear markers for Malagasy plated lizards (Zonosaurus) (2009) (33)
- Transcriptomics in the wild: Hibernation physiology in free‐ranging dwarf lemurs (2018) (33)
- Working at the interface of phylogenetics and population genetics: a biogeographical analysis of Triaenops spp. (Chiroptera: Hipposideridae) (2007) (31)
- The molecular evolutionary dynamics of the vomeronasal receptor (class 1) genes in primates: a gene family on the verge of a functional breakdown (2014) (31)
- Increased population sampling confirms low genetic divergence among Pteropus (Chiroptera: Pteropodidae) fruit bats of Madagascar and other western Indian Ocean islands (2011) (31)
- The importance of scale in comparative microbiome research: New insights from the gut and glands of captive and wild lemurs (2019) (30)
- Blood transcriptomes reveal novel parasitic zoonoses circulating in Madagascar's lemurs (2016) (27)
- Assessing the utility of whole genome amplified DNA for next‐generation molecular ecology (2015) (27)
- Comparative genomics of mammalian hibernators using gene networks. (2014) (27)
- Incongruence between genetic and morphological diversity in Microcebus griseorufus of Beza Mahafaly (2006) (27)
- Population Genetic Analysis of Myzopoda (Chiroptera: Myzopodidae) in Madagascar (2008) (25)
- Bamboo Specialists from Two Mammalian Orders (Primates, Carnivora) Share a High Number of Low-Abundance Gut Microbes (2018) (25)
- The applications and limitations of ontogenetic comparisons for phylogeny reconstruction: the case of the strepsirhine internal carotid artery (1992) (25)
- Multilocus coalescent analyses reveal the demographic history and speciation patterns of mouse lemur sister species (2014) (24)
- Evolution of a tumorigenic property conferred by glycophosphatidyl-inositol membrane anchors of carcinoembryonic antigen gene family members during the primate radiation. (2007) (24)
- Structure and Function of CC-Chemokine Receptor 5 Homologues Derived from Representative Primate Species and Subspecies of the Taxonomic Suborders Prosimii and Anthropoidea (2003) (24)
- Evaluating whole transcriptome amplification for gene profiling experiments using RNA-Seq (2015) (22)
- Pedigree-based and phylogenetic methods support surprising patterns of mutation rate and spectrum in the gray mouse lemur (2021) (22)
- Molecular Clocks without Rocks: New Solutions for Old Problems. (2020) (21)
- Feeding strategy shapes gut metagenomic enrichment and functional specialization in captive lemurs (2018) (21)
- The Relationship of Sleep with Temperature and Metabolic Rate in a Hibernating Primate (2013) (21)
- Ecology and morphology of mouse lemurs (Microcebus spp.) in a hotspot of microendemism in northeastern Madagascar, with the description of a new species (2020) (20)
- Gene Expression Profiling in the Hibernating Primate, Cheirogaleus Medius (2016) (19)
- Hibernation in a primate: does sleep occur? (2016) (17)
- The lemur revolution starts now: the genomic coming of age for a non-model organism. (2013) (17)
- Ancient DNA in Subfossil Lemurs (1999) (16)
- Genetic tests of the taxonomic status of the ring‐tailed lemur (Lemur catta) from the high mountain zone of the Andringitra Massif, Madagascar (2000) (16)
- THE USE OF PHYLOGENY FOR RECONSTRUCTING LEMSJRIFORM BIOGEOGRAPEW (1996) (15)
- Phylogeography of the arid-adapted Malagasy bullfrog, Laliostoma labrosum, influenced by past connectivity and habitat stability. (2015) (15)
- The challenge and promise of estimating the de novo mutation rate from whole‐genome comparisons among closely related individuals (2021) (15)
- Population and Conservation Genetics in an Endangered Lemur, Indri indri, Across Three Forest Reserves in Madagascar (2016) (14)
- Lemurs (2007) (14)
- Defining spatial and temporal patterns of phylogeographic structure in Madagascar’s iguanid lizards (genus Oplurus) (2012) (14)
- Conservation genomic analysis reveals ancient introgression and declining levels of genetic diversity in Madagascar’s hibernating dwarf lemurs (2019) (13)
- Latitude drives diversification in Madagascar's endemic dry forest rodent Eliurus myoxinus (subfamily Nesomyinae) (2013) (13)
- Neutral Theory Is the Foundation of Conservation Genetics. (2018) (13)
- Comparative genomic analysis of sifakas (Propithecus) reveals selection for folivory and high heterozygosity despite endangered status (2021) (13)
- The Mutationathon highlights the importance of reaching standardization in estimates of pedigree-based germline mutation rates (2022) (13)
- Next-generation technologies applied to age-old challenges in Madagascar (2020) (12)
- Population Genetics of the Mauritian Flying Fox, Pteropus niger (2014) (12)
- Fossils Versus Clocks (2013) (12)
- Sequence Data from New Plastid and Nuclear COSII Regions Resolves Early Diverging Lineages in Coffea (Rubiaceae) (2012) (12)
- The founding of Mauritian endemic coffee trees by a synchronous long‐distance dispersal event (2014) (11)
- Next‐generation approaches to advancing eco‐immunogenomic research in critically endangered primates (2014) (11)
- A Deep Divergence Time between Sister Species of Eidolon (Pteropodidae) with Evidence for Widespread Panmixia (2014) (11)
- Origin of Malagasy Carnivora (2001) (11)
- Cheirogaleid diversity and evolution: big questions about small primates (2016) (10)
- Multilocus phylogenetic and geospatial analyses illuminate diversification patterns and the biogeographic history of Malagasy endemic plated lizards (Gerrhosauridae: Zonosaurinae) (2015) (10)
- Comparative Genomic Analysis of the Pheromone Receptor Class 1 Family (V1R) Reveals Extreme Complexity in Mouse Lemurs (Genus, Microcebus) and a Chromosomal Hotspot across Mammals (2019) (10)
- Next-generation in situ conservation and capacity building in Madagascar using a mobile genetics lab (2019) (9)
- The effect of body mass and diet composition on torpor patterns in a Malagasy primate (Microcebus murinus) (2017) (9)
- Pedigree-based measurement of the de novo mutation rate in the gray mouse lemur reveals a high mutation rate, few mutations in CpG sites, and a weak sex bias (2019) (9)
- Conservation: Protection for trade of precious rosewood (2013) (8)
- Theme and variations: heterothermy in mammals. (2014) (8)
- The challenges faced by living stock collections in the USA (2017) (7)
- Native Seychelles tortoises or Aldabran imports? The importance of radiocarbon dating for ancient DNA studies (2005) (7)
- Ancient single origin for Malagasy primates (primate originsycytochrome bymolecular evolution) (1996) (7)
- Mutationathon: towards standardization in estimates of pedigree-based germline mutation rates (2021) (7)
- Evolutionary and phylogenetic insights from a nuclear genome sequence of the extinct, giant, “subfossil” koala lemur Megaladapis edwardsi (2020) (6)
- Phasing Alleles Improves Network Inference with Allopolyploids (2021) (6)
- Initiation of the Primate Genome Project (2022) (6)
- Comparative analyses of two primate species diverged by more than 60 million years show different rates but similar distribution of genome-wide UV repair events (2020) (5)
- RADseq data reveal a lack of admixture in a mouse lemur contact zone contrary to previous microsatellite results (2021) (5)
- Ancient DNA from Megaladapis edwardsi (2001) (5)
- Duke Lemur Center (2017) (4)
- The Rise and Fall and Rise of Ancient DNA Studies (2002) (4)
- Phylogeny of the Lemuridae: Effects of Character and Taxon Sampling on Resolution of Species Relationships within Eulemur (1999) (4)
- Gut Microbial Diversity and Ecological Specialization in Four Sympatric Lemur Species Under Lean Conditions (2021) (4)
- Review of the systematic status of Sceloporus arenicolus Degenhardt and Jones, 1972 with an estimate of divergence time. (2013) (4)
- Population genomic structure in Goodman’s mouse lemur reveals long-standing separation of Madagascar’s Central Highlands and eastern rainforests (2020) (4)
- Molecules and morphology in Primate Systematics: An introduction (1994) (3)
- Gene Flow Happens (2014) (3)
- Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets (2022) (3)
- Hybrid de novo genome assembly and centromere characterization of the gray mouse lemur (Microcebus murinus) (2017) (3)
- Warning SINEs: Alu elements, evolution of the human brain, and the spectrum of neurological disease (2017) (3)
- Variation in gut microbiome structure across the annual hibernation cycle in a wild primate. (2022) (3)
- Divergence dates for Malagasy lemurs estimated from multiple gene loci: fit with climatological events and speciation models (2004) (2)
- Phylogeographic analysis of Goodman's mouse lemur reveals historical interconnectivity of Madagascar's Central Highlands and eastern rainforests (2020) (2)
- Estimation of species divergence times in presence of cross-species gene flow. (2023) (2)
- Living in tiny fragments: a glimpse at the ecology of Goodman’s mouse lemurs (Microcebus lehilahytsara) in the relic forest of Ankafobe, Central Highlands, Madagascar (2021) (2)
- Molecular adaptation to folivory and the conservation implications for Madagascar’s lemurs (2021) (2)
- Population and Conservation Genetics in an Endangered Lemur, Indri indri, Across Three Forest Reserves in Madagascar (2016) (1)
- Prosimian primate life history profiles generated from the new Duke Lemur Center Database (coming soon to a URL near you (2014) (1)
- Complex processes of cryptic speciation in mouse lemurs from a micro-endemism hotspot in Madagascar (2019) (1)
- Applications of 3D printing in small animal magnetic resonance imaging (2019) (1)
- RADseq Data Suggest Occasional Hybridization between Microcebus murinus and M. ravelobensis in Northwestern Madagascar (2022) (1)
- Multilocus coalescent analyses reveal the demographic history of mouse lemur sister species. (2014) (1)
- Conversation at Duke University primate centre (1984) (0)
- Two New Species of Mouse Lemurs (Cheirogaleidae: Microcebus) from Eastern Madagascar (2013) (0)
- ground squirrels Modulation of gene expression in hibernating arctic (2015) (0)
- SBT11087 995..1005 (2012) (0)
- Exploring the mode and tempo of Madagascar's lemuriform radiation (2017) (0)
- cytB Data Set (2009) (0)
- Comparative genomic analysis of the pheromone receptor Class 1 family (V1R) reveals extreme complexity in mouse lemurs (genus, Microcebus) and chromosomal hotspots across mammals (2019) (0)
- Author response: The challenges faced by living stock collections in the USA (2017) (0)
- Ancient DNA genomics of Madagascar’s extinct subfossil lemurs: Palaeopropithecus ingens genetic diversity (2013) (0)
- The utility of PacBio circular consensus sequencing for characterizing complex gene families in non-model organisms (2014) (0)
- cytB and IRBP Data Set (2009) (0)
- Multilocus coalescent analyses reveal the demographic history and speciation patterns of mouse lemur sister species (2014) (0)
- Not one, but multiple radiations underlie the biodiversity of Madagascar’s endangered lemurs (2023) (0)
- Contents Vol. 72, 2001 (2002) (0)
- THEME AND VARIATIONS : HETEROTHERMY IN MAMMALS Theme and Variations : Heterothermy in Mammals (2014) (0)
- Retraction: Teixeira et al. RADseq Data Suggest Occasional Hybridization between Microcebus murinus and M. ravelobensis in Northwestern Madagascar. Genes 2022, 13, 913 (2022) (0)
- Elaborate expansion of syntenic V1R hotspots correlates with high species diversity in nocturnal mouse and dwarf lemurs (2019) (0)
- Are pedigree-based mutation rates the Rosetta Stone of molecular ecology? Promises and pitfalls of whole genome comparisons among closely related individuals. (2021) (0)
- THEME AND VARIATIONS: HETEROTHERMY IN MAMMALS Theme and Variations: Heterothermy in Mammals Integrative and Comparative (2014) (0)
- Supporting Online Material for CITES Designation for Endangered Rosewood in Madagascar (2010) (0)
- Evolutionary genomics of Verreaux’s sifaka (Propithecus verreauxi) (2018) (0)
- Bamboo Specialists from Two Mammalian Orders (Primates, Carnivora) Share a High Number of Low-Abundance Gut Microbes (2017) (0)
- Discovery of prosimian and afrotherian foamy viruses and potential cross species transmissions amidst stable and ancient mammalian co-evolution (2014) (0)
- LAUREN M. CHAN, JAMES W. ARCHIE, ANNE D. YODER & LEE A. FITZGERALD (2013) Review of the systematic status of Sceloporus arenicolus Degenhardt and Jones, 1972 with an estimate of divergence time. Zootaxa , 3664(3), 312–320. (2013) (0)
- Identification of diverse papillomaviruses in captive black-and-white ruffed lemurs (Varecia variegata) (2022) (0)
- Genetic variation in Loudetia simplex supports the presence of ancient grasslands in Madagascar (2023) (0)
- A neural network model for real-time estimation of workpiece thermal expansion (1999) (0)
- Comparative analyses of two primate species diverged by more than 60 million years show different rates but similar distribution of genome-wide UV repair events (2021) (0)
- Conservation genomic analysis reveals ancient introgression and declining levels of genetic diversity in Madagascar’s hibernating dwarf lemurs (2019) (0)
- Classification, evolution, and the nature of biology. By Alec L. Panchen. New York: Cambridge University Press. 1992. xi + 403 pp. ISBN 0‐521‐30582‐9. $80 (cloth) (1993) (0)
- transcript screening Seasonally hibernating phenotype assessed through (2015) (0)
- The effect of body mass and diet composition on torpor patterns in a Malagasy primate (Microcebus murinus) (2016) (0)
- Subject Index Vol. 72, 2001 (2002) (0)
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