Ashley Shade
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American microbiologist
Ashley Shade's AcademicInfluence.com Rankings
Ashley Shadebiology Degrees
Biology
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Microbiology
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#1091
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Biology
Ashley Shade's Degrees
- PhD Microbiology University of California, Berkeley
- Bachelors Biology Stanford University
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Why Is Ashley Shade Influential?
(Suggest an Edit or Addition)According to Wikipedia, Ashley L. Shade is the Director of Research at the Institute of Ecology and the Environment within Le Centre National de la Recherche Scientifique. Shade is an associate professor at Michigan State University in the Department of Microbiology and Molecular Genetics and Department of Plant, Soil and Microbial Sciences. She is best known for her work in microbial ecology and plant-microbe interactions.
Ashley Shade's Published Works
Number of citations in a given year to any of this author's works
Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- A communal catalogue reveals Earth’s multiscale microbial diversity (2017) (1501)
- Beyond the Venn diagram: the hunt for a core microbiome. (2012) (767)
- Fundamentals of Microbial Community Resistance and Resilience (2012) (711)
- Conditionally Rare Taxa Disproportionately Contribute to Temporal Changes in Microbial Diversity (2014) (467)
- Controls on soil microbial community stability under climate change (2013) (309)
- A meta-analysis of changes in bacterial and archaeal communities with time (2013) (299)
- A genomic catalog of Earth’s microbiomes (2020) (295)
- Diversity is the question, not the answer (2016) (293)
- Meeting Report: The Terabase Metagenomics Workshop and the Vision of an Earth Microbiome Project (2010) (253)
- Ecological patterns of seed microbiome diversity, transmission, and assembly. (2017) (203)
- Lake microbial communities are resilient after a whole-ecosystem disturbance (2012) (194)
- Culturing captures members of the soil rare biosphere (2012) (192)
- Unexpected Diversity during Community Succession in the Apple Flower Microbiome (2013) (192)
- Interannual dynamics and phenology of bacterial communities in a eutrophic lake (2007) (182)
- Genome-wide selective sweeps and gene-specific sweeps in natural bacterial populations (2016) (180)
- The under‐ice microbiome of seasonally frozen lakes (2013) (145)
- The microbial ecology of flowers: an emerging frontier in phyllosphere research1 (2014) (141)
- The influence of habitat heterogeneity on freshwater bacterial community composition and dynamics. (2008) (134)
- Assembly and seasonality of core phyllosphere microbiota on perennial biofuel crops (2018) (125)
- Resistance, resilience and recovery: aquatic bacterial dynamics after water column disturbance. (2011) (124)
- Characterizing microbial communities through space and time. (2012) (100)
- Temporal patterns of rarity provide a more complete view of microbial diversity. (2015) (99)
- Effects of Short-Term Warming and Altered Precipitation on Soil Microbial Communities in Alpine Grassland of the Tibetan Plateau (2016) (97)
- Bridging the gap between micro - and macro-scale perspectives on the role of microbial communities in global change ecology (2006) (94)
- Our microbial selves: what ecology can teach us (2011) (92)
- Macroecology to Unite All Life, Large and Small. (2018) (85)
- Typhoons initiate predictable change in aquatic bacterial communities (2008) (82)
- Divergent extremes but convergent recovery of bacterial and archaeal soil communities to an ongoing subterranean coal mine fire (2017) (82)
- Trait-based community assembly and succession of the infant gut microbiome (2019) (72)
- Comparison of Primer Sets for Use in Automated Ribosomal Intergenic Spacer Analysis of Aquatic Bacterial Communities: an Ecological Perspective (2006) (71)
- Abundance-occupancy distributions to prioritize plant core microbiome membership. (2019) (70)
- Bacterial Community Composition and Dynamics Spanning Five Years in Freshwater Bog Lakes (2017) (66)
- Assembly of seed-associated microbial communities within and across successive plant generations (2017) (61)
- When, where and how does microbial community composition matter? (2014) (54)
- A global survey of arsenic-related genes in soil microbiomes (2019) (53)
- Differential bacterial dynamics promote emergent community robustness to lake mixing: an epilimnion to hypolimnion transplant experiment. (2010) (51)
- Persistent microbiome members in the common bean rhizosphere: an integrated analysis of space, time, and plant genotype (2019) (43)
- A Synthetic Community System for Probing Microbial Interactions Driven by Exometabolites (2017) (43)
- Genetic Analysis of Flooding Tolerance in an Andean Diversity Panel of Dry Bean (Phaseolus vulgaris L.) (2018) (43)
- Ecological selection for small microbial genomes along a temperate-to-thermal soil gradient (2018) (39)
- Can the black box be cracked? The augmentation of microbial ecology by high-resolution, automated sensing technologies (2009) (39)
- Computing Workflows for Biologists: A Roadmap (2015) (35)
- Streptomycin Application Has No Detectable Effect on Bacterial Community Structure in Apple Orchard Soil (2013) (34)
- Trait-based patterns of microbial dynamics in dormancy potential and heterotrophic strategy: case studies of resource-based and post-press succession (2018) (33)
- Seasonal and Episodic Lake Mixing Stimulate Differential Planktonic Bacterial Dynamics (2010) (33)
- Microbial metabolites in the marine carbon cycle (2022) (30)
- Community structure explains antibiotic resistance gene dynamics over a temperature gradient in soil (2018) (29)
- Lifestyles of rarity: understanding heterotrophic strategies to inform the ecology of the microbial rare biosphere (2016) (26)
- Broadening Participation in Scientific Conferences during the Era of Social Distancing (2020) (25)
- Dormancy dynamics and dispersal contribute to soil microbiome resilience (2019) (25)
- Manipulating Wild and Tamed Phytobiomes: Challenges and Opportunities (2019) (25)
- Expansion of the global RNA virome reveals diverse clades of bacteriophages (2022) (25)
- Lineage-Specific Responses of Microbial Communities to Environmental Change (2012) (24)
- 16S rRNA/rRNA Gene Ratios and Cell Activity Staining Reveal Consistent Patterns of Microbial Activity in Plant-Associated Soil (2019) (22)
- Temporal dynamics of bacterial communities during seed development and maturation. (2020) (22)
- Seasonal Dynamics of Core Fungi in the Switchgrass Phyllosphere, and Co-Occurrence with Leaf Bacteria (2020) (20)
- Toward a Generalizable Framework of Disturbance Ecology Through Crowdsourced Science (2021) (20)
- NITROGEN CHANGES AND DOMAIN BACTERIA RIBOTYPE DIVERSITY IN SOILS OVERLYING THE CENTRALIA, PENNSYLVANIA UNDERGROUND COAL MINE FIRE (2005) (19)
- Taxonomically-linked growth phenotypes during arsenic stress among arsenic resistant bacteria isolated from soils overlying the Centralia coal seam fire (2018) (19)
- Temporal Dynamics of South End Tidal Creek (Sapelo Island, Georgia) Bacterial Communities (2008) (14)
- RefSoil+: a Reference Database for Genes and Traits of Soil Plasmids (2019) (14)
- “Gradual Entrainment Lake Inverter” (GELI): A novel device for experimental lake mixing (2011) (12)
- Endophytic microbiome variation among single plant seeds (2021) (11)
- Strategies for Building Computing Skills To Support Microbiome Analysis: a Five-Year Perspective from the EDAMAME Workshop (2019) (9)
- Standardized multi-omics of Earth’s microbiomes reveals microbial and metabolite diversity (2022) (9)
- Standardized multi-omics of Earth’s microbiomes reveals microbial and metabolite diversity (2022) (9)
- Understanding Microbiome Stability in a Changing World (2018) (8)
- Erratum for Linz et al., “Bacterial Community Composition and Dynamics Spanning Five Years in Freshwater Bog Lakes” (2017) (8)
- No Evidence of Increased Chronic Traumatic Encephalopathy Pathology or Neurodegenerative Proteinopathy in Former Military Service Members: A Preliminary Study. (2019) (7)
- Biogeography and Diversity of Multi-Trophic Root Zone Microbiomes in Michigan Apple Orchards: Analysis of Rootstock, Scion, and Local Growing Region (2020) (7)
- Abiotic Treatment to Common Bean Plants Results in an Altered Endophytic Seed Microbiome (2020) (6)
- Spatial synchrony in microbial community dynamics: testing among-year and lake patterns (2009) (6)
- Resource Competition and Host Feedbacks Underlie Regime Shifts in Gut Microbiota (2021) (6)
- Multi-omics profiling of Earth’s biomes reveals that microbial and metabolite composition are shaped by the environment (2021) (5)
- Trait-based community assembly and succession of the infant gut microbiome (2019) (4)
- Corrigendum: Effects of Short-Term Warming and Altered Precipitation on Soil Microbial Communities in Alpine Grassland of the Tibetan Plateau (2017) (4)
- Locally Adapted Mimulus Ecotypes Differentially Impact Rhizosphere Bacterial and Archaeal Communities in an Environment-Dependent Manner (2020) (4)
- A town on fire! Integrating 16S rRNA gene amplicon analyses into an undergraduate microbiology lecture class (2018) (4)
- Papillary serous carcinoma of the cervix: ultrasonographic findings. (1998) (4)
- Locally-adapted Mimulus ecotypes differentially impact rhizosphere bacterial and archaeal communities in an environment-dependent manner (2019) (3)
- Exometabolite Dynamics over Stationary Phase Reveal Strain-Specific Responses (2020) (3)
- Multi-omics profiling of Earth’s biomes reveals patterns of diversity and co-occurrence in microbial and metabolite composition across environments (2022) (3)
- Cross-continental biogeography of the common bean rhizosphere microbiome reveals a persistent core membership (2019) (3)
- Seasonal activities of the phyllosphere microbiome of perennial crops (2022) (2)
- Exometabolite dynamics over stationary phase reveal strain-specific responses to nutrient limitation (2020) (2)
- Endophytic microbiome variation at the level of a single plant seed (2021) (2)
- Managing Plant Microbiomes for Sustainable Biofuel Production (2021) (2)
- Abiotic treatment contributes to an alteration of the seed microbiome of common bean (2020) (1)
- Discovery of a spatially and temporally persistent core microbiome of the common bean rhizosphere (2020) (1)
- Comparing gut resistome composition among patients with acute Campylobacter infections and healthy family members (2021) (1)
- Targeting microbial arsenic resistance genes: a new bioinformatic toolkit informs arsenic ecology and evolution in soil genomes and metagenomes (2018) (1)
- Deciphering the Microbiome: Integrating Theory, New Technologies, and Inclusive Science (2022) (1)
- Isolation of Bio Energy Crop Phyllosphere Bacteria from Switchgrass (2017) (1)
- Genome-wide Selective Sweeps in Natural Bacterial Populations Revealed by Time-series Metagenomics (2014) (1)
- Do‐it‐Yourself Mock Community Standard for Multi‐Step Assessment of Microbiome Protocols (2022) (1)
- A global survey of arsenic-related genes in soil microbiomes (2018) (1)
- RefSoil+: A reference for antimicrobial resistance genes on soil plasmids (2018) (1)
- Genome-centric analyses of seasonal phyllosphere microbiome activities in perennial crops (2021) (1)
- Communities to Environmental Change Lineage-Specific Responses of Microbial (2013) (1)
- The causes and consequences of microbial community structure (2015) (1)
- Assembly of seed-associated microbial communities within and across successive plant generations (2017) (0)
- Diversity and mechanisms of arsenic resistance among soil bacteria impacted by the ongoing Centralia coal mine fire (2016) (0)
- Disturbance and recovery: a synthesis of microbial community reassembly following disturbance across realms (2021) (0)
- Phyllosphere exudates select for distinct microbiome members in sorghum epicuticular wax and aerial root mucilage (2022) (0)
- Towards a generalizable framework of disturbance ecology through crowdsourced science (2020) (0)
- 16S rRNA:rDNA ratios and cell activity staining reveal consistent patterns of soil microbial activity (2018) (0)
- Secular Change in Pelvic Morphological Age Indicators (2016) (0)
- Author Correction: A genomic catalog of Earth’s microbiomes (2021) (0)
- Structure in Apple Orchard Soil Detectable Effect on Bacterial Community Streptomycin Application Has No (2013) (0)
- Microbiome rescue: directing resilience of environmental microbial communities. (2023) (0)
- Microbial (Community) Ecology (2016) (0)
- Flower Microbiome Community Succession in the Apple Unexpected Diversity during (2013) (0)
- TREE NEEDS TODAY ! GREAT VARIETY OF TREES TO CHOOSE FROM AT GREAT PRICES ! Custom order for 2022 & SAVE ! Quality Apple & Pear Trees (2019) (0)
- Ecological selection for small microbial genomes along a temperate-to-thermal soil gradient (2018) (0)
- A coevolution experiment reveals parallel mutations in the AcrA-AcrB-TolC efflux pump that contributes to bacterial antibiotic resistance (2022) (0)
- A coevolution experiment between Flavobacterium johnsoniae and Burkholderia thailandensis reveals parallel mutations that reduce antibiotic susceptibility. (2023) (0)
- REDUCING COST AND RADIATION EXPOSURE DURING THE NON-OPERATIVE TREATMENT OF PAEDIATRIC PROXIMAL HUMERAL FRACTURES (2016) (0)
- Trait-based patterns of microbial dynamics in dormancy potential and heterotrophic strategy: case studies of resource-based and post-press succession (2018) (0)
- Publisher Correction: A genomic catalog of Earth’s microbiomes (2020) (0)
- Title : Trait-based patterns of microbial succession in dormancy potential and heterotrophic 1 strategy : case studies of resource-based and post-press succession 2 Running title : Microbial traits dynamics over succession 3 (2017) (0)
- Crowdsourcing science: Synthesizing global perspectives with the help of social media (2019) (0)
- Frontiers and opportunities in bioenergy crop microbiome research networks (2021) (0)
- Bioactive exometabolites drive maintenance competition in simple bacterial communities (2021) (0)
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