Barbara Wold
#57,011
Most Influential Person Now
Professor of Molecular Biology
Barbara Wold's AcademicInfluence.com Rankings
Barbara Woldbiology Degrees
Biology
#2295
World Rank
#3662
Historical Rank
#1028
USA Rank
Molecular Biology
#505
World Rank
#516
Historical Rank
#151
USA Rank
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Biology
Barbara Wold's Degrees
- PhD Molecular Biology University of California, Berkeley
- Bachelors Biology Stanford University
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Why Is Barbara Wold Influential?
(Suggest an Edit or Addition)According to Wikipedia, Barbara J. Wold is the Bren Professor of Molecular Biology, the principal investigator of the Wold Lab at the California Institute of Technology and the principal investigator of the Functional Genomics Resource Center at the Beckman Institute at Caltech. Wold was director of the Beckman Institute at Caltech from 2001 to 2011.
Barbara Wold's Published Works
Number of citations in a given year to any of this author's works
Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- Mapping and quantifying mammalian transcriptomes by RNA-Seq (2008) (12207)
- Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation. (2010) (11813)
- Landscape of transcription in human cells (2012) (4392)
- Genome-Wide Mapping of in Vivo Protein-DNA Interactions (2007) (2675)
- Transcript assembly and abundance estimation from RNA-Seq reveals thousands of new transcripts and switching among isoforms (2010) (2281)
- An integrated encyclopedia of DNA elements in the human genome (2012) (2080)
- ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia (2012) (1701)
- A User's Guide to the Encyclopedia of DNA Elements (ENCODE) (2011) (1467)
- A comparative encyclopedia of DNA elements in the mouse genome (2014) (1337)
- The Human Cell Atlas (2017) (1285)
- Transformation of mammalian cells with genes from procaryotes and eucaryotes (1979) (1177)
- Extensive Promoter-Centered Chromatin Interactions Provide a Topological Basis for Transcription Regulation (2012) (1142)
- Single-cell analysis of regulatory gene expression in quiescent and activated mouse skeletal muscle satellite cells. (1997) (957)
- In vivo footprinting of a muscle specific enhancer by ligation mediated PCR. (1990) (922)
- Expanded encyclopaedias of DNA elements in the human and mouse genomes (2020) (765)
- Enhanced Proliferation, Survival, and Dopaminergic Differentiation of CNS Precursors in Lowered Oxygen (2000) (733)
- Defining functional DNA elements in the human genome (2014) (647)
- Dynamic DNA methylation across diverse human cell lines and tissues (2013) (627)
- Computation for ChIP-seq and RNA-seq studies (2009) (621)
- Know Your Neighbors: Three Phenotypes in Null Mutants of the Myogenic bHLH Gene MRF4 (1996) (583)
- From single-cell to cell-pool transcriptomes: Stochasticity in gene expression and RNA splicing (2014) (451)
- Herculin, a fourth member of the MyoD family of myogenic regulatory genes. (1990) (446)
- An encyclopedia of mouse DNA elements (Mouse ENCODE) (2012) (438)
- Culture in Reduced Levels of Oxygen Promotes Clonogenic Sympathoadrenal Differentiation by Isolated Neural Crest Stem Cells (2000) (414)
- Skeletal muscle determination and differentiation: story of a core regulatory network and its context. (1996) (368)
- Genomic sequencing and methylation analysis by ligation mediated PCR. (1989) (355)
- Dynamic Transformations of Genome-wide Epigenetic Marking and Transcriptional Control Establish T Cell Identity (2012) (330)
- Inhibition of DNA binding proteins by oligonucleotide-directed triple helix formation. (1989) (313)
- MyoD(-/-) satellite cells in single-fiber culture are differentiation defective and MRF4 deficient. (2000) (303)
- Sequence census methods for functional genomics (2008) (281)
- Stable reduction of thymidine kinase activity in cells expressing high levels of anti-sense RNA (1985) (272)
- Structural gene sets active in embryos and adult tissues of the sea urchin (1976) (266)
- Oxygen‐mediated regulation of skeletal muscle satellite cell proliferation and adipogenesis in culture (2001) (233)
- Microglia in the Cerebral Cortex in Autism (2012) (227)
- Disruption of the mouse MRF4 gene identifies multiple waves of myogenesis in the myotome. (1995) (224)
- Effects of different DNA polymerases in ligation-mediated PCR: enhanced genomic sequencing and in vivo footprinting. (1992) (211)
- Muscle creatine kinase sequence elements regulating skeletal and cardiac muscle expression in transgenic mice (1989) (208)
- Altering genotype and phenotype by DNA-mediated gene transfer. (1980) (203)
- c-myc inhibition of MyoD and myogenin-initiated myogenic differentiation (1991) (185)
- p62 overexpression in breast tumors and regulation by prostate-derived Ets factor in breast cancer cells (2003) (174)
- HLH forced dimers: Tethering MyoD to E47 generates a dominant positive myogenic factor insulated from negative regulation by Id (1993) (168)
- Evidence for Developmentally Programmed Transdifferentiation in Mouse Esophageal Muscle (1995) (165)
- Comparative genomics modeling of the NRSF/REST repressor network: from single conserved sites to genome-wide repertoire. (2006) (163)
- Interleukin-2 transcription is regulated in vivo at the level of coordinated binding of both constitutive and regulated factors (1994) (159)
- Applicability of Tandem Affinity Purification MudPIT to Pathway Proteomics in Yeast*S (2004) (157)
- RNA editing in the human ENCODE RNA-seq data (2012) (156)
- Systematic evaluation of factors influencing ChIP-seq fidelity (2012) (153)
- Cellerator: extending a computer algebra system to include biochemical arrows for signal transduction simulations (2003) (149)
- Effects of sequence variation on differential allelic transcription factor occupancy and gene expression (2012) (148)
- Single-cell transcriptome analysis reveals dynamic changes in lncRNA expression during reprogramming. (2015) (144)
- Mapping a multiplexed zoo of mRNA expression (2016) (139)
- Constitutive and metal-inducible protein:DNA interactions at the mouse metallothionein I promoter examined by in vivo and in vitro footprinting. (1988) (133)
- Kinetic analysis of oligodeoxyribonucleotide-directed triple-helix formation on DNA. (1990) (132)
- Spatiometabolic Stratification of Shewanella oneidensis Biofilms (2006) (131)
- New computational approaches for analysis of cis-regulatory networks. (2002) (126)
- Large-Scale Quality Analysis of Published ChIP-seq Data (2013) (124)
- Analysis of promoter-specific repression by triple-helical DNA complexes in a eukaryotic cell-free transcription system. (1992) (117)
- Sea urchin embryo mRNA sequences expressed in the nuclear RNA of adult tissues (1978) (113)
- Scaffolding a Caenorhabditis nematode genome with RNA-seq. (2010) (108)
- The bHLH regulator pMesogenin1 is required for maturation and segmentation of paraxial mesoderm. (2000) (104)
- Isolated sequences from the linked Myf-5 and MRF4 genes drive distinct patterns of muscle-specific expression in transgenic mice. (1993) (102)
- Significance and statistical errors in the analysis of DNA microarray data (2002) (98)
- Introduction and expression of a rabbit beta-globin gene in mouse fibroblasts. (1979) (96)
- The changing mouse embryo transcriptome at whole tissue and single-cell resolution (2020) (96)
- Nucleolar localization of myc transcripts (1993) (89)
- Skeletal muscle phenotypes initiated by ectopic MyoD in transgenic mouse heart. (1992) (89)
- Appearance and persistence of maternal RNA sequences in sea urchin development. (1977) (86)
- Different MRF4 knockout alleles differentially disrupt Myf-5 expression: cis-regulatory interactions at the MRF4/Myf-5 locus. (1997) (79)
- Perspectives on ENCODE (2020) (79)
- The bHLH class protein pMesogenin1 can specify paraxial mesoderm phenotypes. (2000) (70)
- A technology-agnostic long-read analysis pipeline for transcriptome discovery and quantification (2019) (69)
- Mining gene expression data by interpreting principal components (2006) (68)
- p27Kip1 is expressed transiently in developing myotomes and enhances myogenesis. (1998) (67)
- Transformation of mammalian cells with genes from prokaryotes and eukaryotes. 1979. (1992) (63)
- Poly-L-ornithine-mediated transformation of mammalian cells (1987) (62)
- GA4GH: International policies and standards for data sharing across genomic research and healthcare (2021) (62)
- Single-Cell Analysis Reveals Regulatory Gene Expression Dynamics Leading to Lineage Commitment in Early T Cell Development. (2019) (62)
- Ligation-mediated PCR for genomic sequencing and footprinting. (2001) (62)
- Enhanced signals and fast nucleic acid hybridization by microfluidic chaotic mixing. (2006) (57)
- Occupancy maps of 208 chromatin-associated proteins in one human cell type (2020) (56)
- The Human Cell Atlas White Paper (2018) (55)
- Cloning of mid-G1 serum response genes and identification of a subset regulated by conditional myc expression. (1994) (53)
- From Coexpression to Coregulation: An Approach to Inferring Transcriptional Regulation among Gene Classes from Large-Scale Expression Data (1999) (53)
- High resolution mapping of Twist to DNA in Drosophila embryos: Efficient functional analysis and evolutionary conservation. (2011) (52)
- Integrating and mining the chromatin landscape of cell-type specificity using self-organizing maps (2013) (49)
- Reproducibility, fidelity, and discriminant validity of mRNA amplification for microarray analysis from primary hematopoietic cells. (2005) (47)
- Genome-Wide Analysis Reveals Coating of the Mitochondrial Genome by TFAM (2013) (46)
- Tissue-specific expression of distinct spectrin and ankyrin transcripts in erythroid and nonerythroid cells (1985) (44)
- Phosphorothioate oligonucleotide-directed triple helix formation. (1994) (44)
- Identification and confirmation of a module of coexpressed genes. (2002) (43)
- Gene expression changes in a tumor xenograft by a pyrrole-imidazole polyamide (2012) (41)
- BRCA1 mRNA is expressed highly during meiosis and spermiogenesis but not during mitosis of male germ cells. (1996) (40)
- Inviability of a DNA2 deletion mutant is due to the DNA damage checkpoint (2011) (40)
- Genomic DNA as a cohybridization standard for mammalian microarray measurements. (2004) (38)
- Molecular cloning of cDNA for the nuclear ribonucleoprotein particle C proteins: a conserved gene family. (1986) (37)
- The NIH BD2K center for big data in translational genomics (2015) (36)
- Ligation-mediated PCR: Applications to genomic footprinting (1991) (36)
- Fully automated high-throughput chromatin immunoprecipitation for ChIP-seq: Identifying ChIP-quality p300 monoclonal antibodies (2014) (34)
- A highly conserved molecular switch binds MSY-3 to regulate myogenin repression in postnatal muscle. (2008) (33)
- Multigenome DNA sequence conservation identifies Hox cis-regulatory elements. (2008) (29)
- Inhibition of Klenow fragment DNA polymerase on double-helical templates by oligonucleotide-directed triple-helix formation. (1994) (28)
- Evidence for Site-Specific Occupancy of the Mitochondrial Genome by Nuclear Transcription Factors (2014) (28)
- Differentiation and fiber type-specific activity of a muscle creatine kinase intronic enhancer (2011) (27)
- Transcriptional regulation by nicotine in dopaminergic neurons. (2013) (26)
- Pitfalls of mapping high-throughput sequencing data to repetitive sequences: Piwi's genomic targets still not identified. (2015) (21)
- Reconstructing a metazoan genetic pathway with transcriptome-wide epistasis measurements (2017) (20)
- Isolation and characterization of a Xenopus laevis C protein cDNA: structure and expression of a heterogeneous nuclear ribonucleoprotein core protein. (1988) (19)
- Dynamics of microRNA expression during mouse prenatal development (2018) (19)
- Expression of transfected vimentin genes in differentiating murine erythroleukemia cells reveals divergent cis-acting regulation of avian and mammalian vimentin sequences (1987) (19)
- Tissue-specific expression from a compound TATA-dependent and TATA-independent promoter (1990) (18)
- Transcription factor redundancy and tissue-specific regulation: Evidence from functional and physical network connectivity (2012) (17)
- Connectivity in the Yeast Cell Cycle Transcription Network: Inferences from Neural Networks (2006) (17)
- Systematic assessment of long-read RNA-seq methods for transcript identification and quantification (2021) (16)
- Reply to Brunet and Doolittle: Both selected effect and causal role elements can influence human biology and disease (2014) (15)
- Oligonucleotide-directed DNA triple-helix formation: an approach to artificial repressors? (1991) (15)
- A mathematical and computational framework for quantitative comparison and integration of large-scale gene expression data (2005) (14)
- Ligation‐Mediated PCR for Genomic Sequencing and Footprinting (1991) (14)
- Comparative analysis of Homo sapiens and Mus musculus cyclin-dependent kinase (CDK) inhibitor genes P16 (MTS1) and P15 (MTS2) (1995) (12)
- Mapping and modeling the genomic basis of differential RNA isoform expression at single-cell resolution with LR-Split-seq (2021) (11)
- Author response: The Human Cell Atlas (2017) (10)
- Clustering analysis of microarray gene expression data by splitting algorithm (2003) (9)
- Dissecting the regulatory activity and sequence content of loci with exceptional numbers of transcription factor associations (2019) (9)
- Genomic DNA as a general cohybridization standard for ratiometric microarrays. (2006) (7)
- Multi-tissue integrative analysis of personal epigenomes (2021) (6)
- TRANSFORMATION OF MAMMALIAN CELLS WITH PROKARYOTIC AND EUKARYOTIC GENES (1979) (5)
- A ratiometric-based measure of gene co-expression (2014) (4)
- Mapping and modeling the genomic basis of differential RNA isoform expression at single-cell resolution with LR-Split-seq (2021) (4)
- STABLE AND UNSTABLE EXPRESSION OF GENES IN DNA TRANSFORMED CELLS (1980) (3)
- Genetic Analysis of a Metazoan Pathway using Transcriptomic Phenotypes (2017) (3)
- A human embryonic limb cell atlas resolved in space and time (2023) (2)
- The EN-TEx resource of multi-tissue personal epigenomes & variant-impact models (2022) (2)
- specificity using self-organizing maps Integrating and mining the chromatin landscape of cell-type Material Supplemental (2013) (2)
- expression and RNA splicing From single-cell to cell-pool transcriptomes : Stochasticity in gene Material Supplemental (2014) (2)
- Introduction and expression of a rabbit f 3-globin gene in mouse fibroblasts ( DNA-mediated gene transfer / cotransformation / intervening sequences / gene regulation ) (2)
- Author Correction: Expanded encyclopaedias of DNA elements in the human and mouse genomes (2022) (2)
- Methods for “ The effects of genome sequence on differential allelic transcription factor occupancy and gene expression ” (2012) (1)
- RNAget: an API to securely retrieve RNA quantifications (2023) (1)
- A comparison of clustering algorithms for use in large scale gene expression analysis using synthetic microarray data (2001) (1)
- An encyclopedia of mouse DNA elements (Mouse ENCODE) (2012) (1)
- Efficient functional analysis and evolutionary conservation embryos : Drosophila High resolution mapping of Twist to DNA in Material Supplemental (2011) (1)
- Public Library of Science Initiative - Open Letter (2000) (1)
- The ENCODE Uniform Analysis Pipelines (2023) (1)
- modENCODE consortia ChIP-seq guidelines and practices of the ENCODE and Material Supplemental (2012) (1)
- RNAget: an API to securely retrieve RNA quantifications (2023) (1)
- Yet another Feature Selection Study for Microarrays (2004) (1)
- A ratiometric-based measure of gene co-expression (2014) (1)
- A comparitive framework for understanding clustering results (2001) (0)
- network: From single conserved sites to genome-wide repertoire Comparative genomics modeling of the NRSF/REST repressor (2007) (0)
- Program/Abstract # 13Investigating ChIP-seq derived candidate cis-regulatory regions in two different developmental systems (2010) (0)
- Tissue-specific Expression of Distinct Spectrin and Transcripts in Erythroid and Nonerythroid Cells (2003) (0)
- STATISTICAL INFERENCE OF BIOLOGICALLY-PLAUSIBLE DYNAMIC REGULATORY NETWORKS WITH CORE-LEAF TOPOLOGY (2005) (0)
- Author Correction: Perspectives on ENCODE (2022) (0)
- Next-generation sequencing technologies are beginning to facilitate genome sequencing. But in addition, new applications and new assay concepts have emerged that are vastly increasing our ability to understand genome function. (2008) (0)
- Occupancy patterns of 208 DNA-associated proteins in a single human cell type (2018) (0)
- The Role of E Protein Heterodimer Partner Switching in Determining Chromatin Landscape and T Cell Fate Commitment in Mouse Early T Cell Development (2018) (0)
- Evidence from functional and physical network connectivity Transcription factor redundancy and tissue-specific regulation : Material Supplemental (2012) (0)
- A scalable and integrative system for pathway bioinformatics and systems biology. (2010) (0)
- Technology advancement for studying gene expression and gene function: a workshop report (2004) (0)
- Single‐cell Resolution of Developing Tissues and Cell Identity Programming (2018) (0)
- Tissue-specific Expression of Distinct Spectrin and Transcripts in Erythroid and Nonerythroid Cells Ankyrin (2006) (0)
- 18-P012 The muscle gene regulatory network (2009) (0)
- Dissecting the regulatory activity and key sequence elements of loci with exceptional numbers of transcription factor associations (2019) (0)
- Stem Cells: The Science of Regeneration (2000) (0)
- Effects ofdifferent DNA polymerases inligation-mediate d PCR: Enhancedgenomic sequencing andinvivofootprinting (1992) (0)
- Development and application of ChIPSeq: genome‐wide DNA binding by MyoD (2008) (0)
- Testing for Combinatorial Activity of 5′ and 3′ MyoD Binding Regions in Mouse Acta1 Gene Expression (2016) (0)
- Microglia in the Cerebral Cortex in Autism (2012) (0)
- Multi-tissue integrative analysis of personal epigenomes [preprint] Multi-tissue integrative analysis of personal epigenomes [preprint] you. (2021) (0)
- Room 310, 10/18/2000 2: 00 PM - 3: 30 PM (PD) Oxygen in Culture Influences Phenotype of Stem Cells: The Choice between Skeletal Muscle and Fat A-514 (2000) (0)
- nematode genome with RNA-seq Caenorhabditis Scaffolding a Material (2010) (0)
- Author Correction: Expanded encyclopaedias of DNA elements in the human and mouse genomes (2022) (0)
- RGASP: assessment of gene-finding tools in the high-throughput era (2010) (0)
- Author Correction: Expanded encyclopaedias of DNA elements in the human and mouse genomes (2022) (0)
- Studies of structural gene transcripts in sea urchin embryos and adult tissues (1978) (0)
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