Brian B. Avants
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Brian B. Avantsengineering Degrees
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Engineering
Brian B. Avants's Degrees
- PhD Biomedical Engineering University of Pennsylvania
- Masters Electrical Engineering University of Pennsylvania
- Bachelors Electrical Engineering University of Pennsylvania
Why Is Brian B. Avants Influential?
(Suggest an Edit or Addition)Brian B. Avants's Published Works
Number of citations in a given year to any of this author's works
Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- Symmetric diffeomorphic image registration with cross-correlation: Evaluating automated labeling of elderly and neurodegenerative brain (2008) (3793)
- The Multimodal Brain Tumor Image Segmentation Benchmark (BRATS) (2015) (3526)
- N4ITK: Improved N3 Bias Correction (2010) (3473)
- A reproducible evaluation of ANTs similarity metric performance in brain image registration (2011) (3099)
- Evaluation of 14 nonlinear deformation algorithms applied to human brain MRI registration (2009) (2122)
- Advanced Normalization Tools (ANTs) (2020) (816)
- The optimal template effect in hippocampus studies of diseased populations (2010) (532)
- Large-scale evaluation of ANTs and FreeSurfer cortical thickness measurements (2014) (493)
- Evaluation of Registration Methods on Thoracic CT: The EMPIRE10 Challenge (2011) (442)
- The Insight ToolKit image registration framework (2014) (437)
- An Open Source Multivariate Framework for n-Tissue Segmentation with Evaluation on Public Data (2011) (435)
- Geodesic estimation for large deformation anatomical shape averaging and interpolation (2004) (413)
- Early Stress Is Associated with Alterations in the Orbitofrontal Cortex: A Tensor-Based Morphometry Investigation of Brain Structure and Behavioral Risk (2010) (371)
- Evaluation of volume-based and surface-based brain image registration methods (2010) (254)
- Optimal Symmetric Multimodal Templates and Concatenated Random Forests for Supervised Brain Tumor Segmentation (Simplified) with ANTsR (2015) (242)
- Medial temporal structures and memory functions in adolescents with heavy cannabis use. (2011) (233)
- Nearly automatic segmentation of hippocampal subfields in in vivo focal T2-weighted MRI (2010) (232)
- High-Dimensional Spatial Normalization of Diffusion Tensor Images Improves the Detection of White Matter Differences: An Example Study Using Amyotrophic Lateral Sclerosis (2007) (231)
- High density three-dimensional localization microscopy across large volumes (2016) (231)
- Registration based cortical thickness measurement (2009) (223)
- Associations between children's socioeconomic status and prefrontal cortical thickness. (2013) (211)
- Structural Variations in Prefrontal Cortex Mediate the Relationship between Early Childhood Stress and Spatial Working Memory (2012) (201)
- Age-Related Effects and Sex Differences in Gray Matter Density, Volume, Mass, and Cortical Thickness from Childhood to Young Adulthood (2017) (194)
- Explicit B-spline regularization in diffeomorphic image registration (2013) (190)
- Early parental care is important for hippocampal maturation: Evidence from brain morphology in humans (2010) (185)
- Dementia induces correlated reductions in white matter integrity and cortical thickness: A multivariate neuroimaging study with sparse canonical correlation analysis (2010) (183)
- A learning-based wrapper method to correct systematic errors in automatic image segmentation: Consistently improved performance in hippocampus, cortex and brain segmentation (2011) (171)
- A high-resolution computational atlas of the human hippocampus from postmortem magnetic resonance imaging at 9.4 T (2009) (161)
- Impaired action knowledge in amyotrophic lateral sclerosis (2008) (158)
- Structural consequences of diffuse traumatic brain injury: A large deformation tensor-based morphometry study (2008) (153)
- Neuroanatomy of Apathy and Disinhibition in Frontotemporal Lobar Degeneration (2009) (145)
- Lagrangian frame diffeomorphic image registration: Morphometric comparison of human and chimpanzee cortex (2006) (144)
- Bias in estimation of hippocampal atrophy using deformation-based morphometry arises from asymmetric global normalization: An illustration in ADNI 3 T MRI data (2010) (140)
- Histology-derived volumetric annotation of the human hippocampal subfields in postmortem MRI (2014) (130)
- Neuroinformatics for Genome-Wide 3-D Gene Expression Mapping in the Mouse Brain (2007) (130)
- Canine and Human Visual Cortex Intact and Responsive Despite Early Retinal Blindness from RPE65 Mutation (2007) (122)
- Resting cerebral blood flow alterations in chronic traumatic brain injury: an arterial spin labeling perfusion FMRI study. (2010) (119)
- Reversal of the concreteness effect in semantic dementia (2009) (117)
- Multivariate examination of brain abnormality using both structural and functional MRI (2007) (115)
- Automated segmentation of chronic stroke lesions using LINDA: Lesion identification with neighborhood data analysis (2016) (112)
- Non-fluent speech in frontotemporal lobar degeneration (2009) (112)
- Improved accuracy of lesion to symptom mapping with multivariate sparse canonical correlations (2017) (111)
- Characterization of sexual dimorphism in the human corpus callosum (2003) (110)
- Speech errors in progressive non-fluent aphasia (2010) (107)
- Multivariate analysis of structural and diffusion imaging in traumatic brain injury. (2008) (102)
- Longitudinal reproducibility and accuracy of pseudo-continuous arterial spin-labeled perfusion MR imaging in typically developing children. (2012) (99)
- Evaluation of automatic neonatal brain segmentation algorithms: The NeoBrainS12 challenge (2015) (90)
- Directly Manipulated Free-Form Deformation Image Registration (2009) (86)
- A Digital Atlas of the Dog Brain (2012) (82)
- White matter imaging helps dissociate tau from TDP-43 in frontotemporal lobar degeneration (2013) (82)
- Altered Resting Cerebral Blood Flow in Adolescents With in Utero Cocaine Exposure Revealed by Perfusion Functional MRI (2007) (79)
- Why are patients with progressive nonfluent aphasia nonfluent? (2010) (79)
- White matter hyperintensities are more highly associated with preclinical Alzheimer's disease than imaging and cognitive markers of neurodegeneration (2016) (78)
- 3D Mouse Brain Reconstruction from Histology Using a Coarse-to-Fine Approach (2006) (76)
- Integrated Graph Cuts for Brain MRI Segmentation (2006) (72)
- Advanced Normalization Tools: V1.0 (2009) (72)
- Effect of socioeconomic status (SES) disparity on neural development in female African-American infants at age 1 month. (2016) (72)
- The role of ventral medial prefrontal cortex in social decisions: Converging evidence from fMRI and frontotemporal lobar degeneration (2010) (67)
- A High-Resolution Computational Atlas of the Human Hippocampus from Postmortem Magnetic Resonance Imaging at 9.4 Tesla (2009) (66)
- Sparse canonical correlation analysis relates network-level atrophy to multivariate cognitive measures in a neurodegenerative population (2014) (66)
- Effects of heavy in utero cocaine exposure on adolescent caudate morphology. (2007) (66)
- Atypical cortical connectivity and visuospatial cognitive impairments are related in children with chromosome 22q11.2 deletion syndrome (2008) (65)
- Ventilation‐based segmentation of the lungs using hyperpolarized 3He MRI (2011) (62)
- The power of neuroimaging biomarkers for screening frontotemporal dementia (2014) (56)
- The pediatric template of brain perfusion (2015) (49)
- Symmetric Diffeomorphic Image Registration: Evaluating Automated Labeling of Elderly and Neurodegenerative Cortex and Frontal Lobe (2006) (49)
- Logical circularity in voxel‐based analysis: Normalization strategy may induce statistical bias (2014) (48)
- Genetic and neuroanatomic associations in sporadic frontotemporal lobar degeneration (2014) (48)
- Multivariate Normalization with Symmetric Diffeomorphisms for Multivariate Studies (2007) (48)
- Learning from open source software projects to improve scientific review (2012) (45)
- Estimation of perfusion and arterial transit time in myocardium using free‐breathing myocardial arterial spin labeling with navigator‐echo (2010) (44)
- Hierarchical organization of scripts: converging evidence from FMRI and frontotemporal degeneration. (2010) (44)
- Enhanced estimations of post‐stroke aphasia severity using stacked multimodal predictions (2017) (44)
- An Adaptive Minimal Path Generation Technique for Vessel Tracking in CTA/CE-MRA Volume Images (2000) (42)
- Neuroconductor: an R platform for medical imaging analysis (2019) (41)
- Predicting the laterality of temporal lobe epilepsy from PET, MRI, and DTI: A multimodal study (2015) (41)
- Robust Automated Amygdala Segmentation via Multi-Atlas Diffeomorphic Registration (2012) (39)
- Predicting Cognitive Data from Medical Images Using Sparse Linear Regression (2013) (39)
- Convolutional Neural Networks with Template-Based Data Augmentation for Functional Lung Image Quantification. (2019) (39)
- Spatiotemporal Normalization for Longitudinal Analysis of Gray Matter Atrophy in Frontotemporal Dementia (2007) (38)
- Measuring longitudinal change in the hippocampal formation from in vivo high-resolution T2-weighted MRI (2012) (37)
- Deficits in concept formation in amyotrophic lateral sclerosis. (2012) (37)
- Adaptive graph cuts with tissue priors for brain MRI segmentation (2006) (36)
- An Automated Approach to Connectivity-Based Partitioning of Brain Structures (2005) (35)
- N4ITK: Improved N3 bias correction with robust B-spline approximation (2010) (33)
- Quantitative mouse brain phenotyping based on single and multispectral MR protocols (2012) (33)
- The ANTsX ecosystem for quantitative biological and medical imaging (2021) (33)
- Relation of Childhood Home Environment to Cortical Thickness in Late Adolescence: Specificity of Experience and Timing (2015) (33)
- Instrumentation bias in the use and evaluation of scientific software: recommendations for reproducible practices in the computational sciences (2013) (32)
- Small Animal Multivariate Brain Analysis (SAMBA) – a High Throughput Pipeline with a Validation Framework (2017) (31)
- Validation of plaster endocast morphology through 3D CT image analysis. (2007) (30)
- Impact of Reference and Target Region Selection on Amyloid PET SUV Ratios in the Phase 1b PRIME Study of Aducanumab (2019) (30)
- The ANTs cortical thickness processing pipeline (2013) (29)
- Shape averaging with diffeomorphic flows for atlas creation (2004) (27)
- A Dynamic Model of Average Lung Deformation Using Capacity-Based Reparameterization and Shape Averaging of Lung MR Images (2004) (25)
- Sparse Unbiased Analysis of Anatomical Variance in Longitudinal Imaging (2010) (25)
- Arterial spin labeling perfusion predicts longitudinal decline in semantic variant primary progressive aphasia (2016) (24)
- Can MRI screen for CSF biomarkers in neurodegenerative disease? (2013) (24)
- Learning image-based spatial transformations via convolutional neural networks: A review. (2019) (24)
- Relating brain anatomy and cognitive ability using a multivariate multimodal framework (2014) (24)
- Longitudinal Mapping of Cortical Thickness Measurements: An Alzheimer's Disease Neuroimaging Initiative-Based Evaluation Study. (2019) (24)
- Regional and Hemispheric Variation in Cortical Thickness in Chimpanzees (Pan troglodytes) (2013) (24)
- Structure specific analysis of the hippocampus in temporal lobe epilepsy (2009) (23)
- Some is not enough: Quantifier comprehension in corticobasal syndrome and behavioral variant frontotemporal dementia (2011) (21)
- The ANTs Longitudinal Cortical Thickness Pipeline (2017) (21)
- Functional and Structural Neuroimaging Correlates of Repetitive Low-Level Blast Exposure in Career Breachers (2020) (21)
- Cardiac Medial Modeling and Time-Course Heart Wall Thickness Analysis (2008) (21)
- Sentence processing in Lewy body spectrum disorder: The role of working memory (2012) (20)
- The Correlation of Cognitive Decline with Frontotemporal Dementia Induced Annualized Gray Matter Loss Using Diffeomorphic Morphometry (2005) (19)
- Neuropsychological Testing Predicts Cerebrospinal Fluid Amyloid-β in Mild Cognitive Impairment. (2015) (19)
- Eigenanatomy Improves Detection Power for Longitudinal Cortical Change (2012) (19)
- Eigenanatomy: sparse dimensionality reduction for multi-modal medical image analysis. (2015) (18)
- A population level atlas of Mus musculus craniofacial skeleton and automated image‐based shape analysis (2017) (18)
- Reproducibility of functional network metrics and network structure: A comparison of task-related BOLD, resting ASL with BOLD contrast, and resting cerebral blood flow (2013) (18)
- Topological Well-Composedness and Glamorous Glue: A Digital Gluing Algorithm for Topologically Constrained Front Propagation (2011) (17)
- Longitudinal cortical atrophy in amyotrophic lateral sclerosis with frontotemporal dementia. (2009) (17)
- The Shape Operator for Differential Analysis of Images (2003) (17)
- Non-Rigid Image Registration (2004) (16)
- Multivariate MR biomarkers better predict cognitive dysfunction in mouse models of Alzheimer's disease. (2018) (15)
- From label fusion to correspondence fusion: A new approach to unbiased groupwise registration (2012) (15)
- A Unified Image Registration Framework for ITK (2012) (14)
- Subject-specific functional parcellation via Prior Based Eigenanatomy (2014) (14)
- Automatic Registration-Based Segmentation for Neonatal Brains Using ANTs and Atropos (2012) (13)
- Symmetric Geodesic Shape Averaging and Shape Interpolation (2004) (13)
- Shape Characterization of the Corpus Callosum in Schizophrenia Using Template Deformation (2002) (13)
- Improved FFD B-Spline Image Registration (2007) (13)
- Reconstruction of the human hippocampus in 3D from histology and high-resolution ex-vivo MRI (2012) (12)
- Measuring the electrical conductivity of the earth (1999) (12)
- Multi-start Method with Prior Learning for Image Registration (2007) (12)
- Decomposing cerebral blood flow MRI into functional and structural components: A non-local approach based on prediction (2015) (12)
- Towards a Dynamic Model of Pulmonary Parenchymal Deformation: Evaluation of Methods for Temporal Reparameterization of Lung Data (2005) (12)
- Shape-Based Alignment of Hippocampal Subfields: Evaluation in Postmortem MRI (2008) (11)
- Automatic Clustering and Thickness Measurement of Anatomical Variants of the Human Perirhinal Cortex (2014) (10)
- Similarity-driven multi-view embeddings from high-dimensional biomedical data (2020) (10)
- Spatial normalization of injured brains for neuroimaging research : An illustrative introduction of available options (2009) (10)
- Formulation and Evaluation of Variational Curve Matching with Prior Constraints (2003) (9)
- Soft parametric curve matching in scale-space (2002) (9)
- Geodesic Image Normalization and Temporal Parameterization in the Space of Diffeomorphisms (2006) (9)
- Geodesic Image Normalization in the Space of Diffeomorphisms (2006) (9)
- Branching medial models for cardiac shape representation (2008) (9)
- Methodological considerations in longitudinal morphometry of traumatic brain injury (2012) (9)
- Standing on the Shoulders of Giants: Improving Medical Image Segmentation via Bias Correction (2010) (9)
- Structural connectivity via the tensor-based morphometry (2011) (8)
- Diffeomorphic Directly Manipulated Free-Form Deformation Image Registration via Vector Field Flows (2012) (7)
- SYMMETRIC SHAPE AVERAGING IN THE DIFFEOMORPHIC SPACE (2007) (7)
- Anatomy-Based Visualizations of Diffusion Tensor Images of Brain White Matter (2006) (7)
- Convolutional Neural Networks for Rapid and Simultaneous Brain Extraction and Tissue Segmentation (2018) (7)
- Geodesic Image Interpolation: Parameterizing and Interpolating Spatiotemporal Images (2005) (7)
- Multi-atlas Approaches for Image Segmentation across Modality , Species and Application Area (2019) (7)
- ANTsX: A dynamic ecosystem for quantitative biological and medical imaging (2020) (7)
- Neuroinformatics and the The Insight ToolKit (2015) (7)
- Continuous Curve Matching with Scale-Space Curvature and Extrema-Based Scale Selection (2003) (6)
- Cortical parcellation for neonatal brains (2014) (6)
- Regional resting cerebral blood flow alterations in chronic diffuse traumatic brain injury: An arterial spin labeling perfusion fMRI study (2009) (6)
- Agreement between the white matter connectivity based on the tensor-based morphometry and the volumetric white matter parcellations based on diffusion tensor imaging (2012) (5)
- Fusing Functional Signals by Sparse Canonical Correlation Analysis Improves Network Reproducibility (2013) (5)
- Quantitative Comparison of Registration-Based Lung Motion Estimates from Whole-Lung MR Images and Corresponding Two-Dimensional Slices (2008) (5)
- Multivariate analysis of thalamo-cortical connectivity loss in TBI (2008) (4)
- Shape optimizing diffeomorphisms for medical image analysis (2005) (4)
- A Generalization of Free-Form Deformation Image Registration Within the ITK Finite Element Framework (2006) (4)
- Anatomically-Constrained PCA for Image Parcellation (2013) (4)
- Amyloid beta–positive subjects exhibit longitudinal network-specific reductions in spontaneous brain activity (2019) (4)
- Image‐ versus histogram‐based considerations in semantic segmentation of pulmonary hyperpolarized gas images (2021) (4)
- Measuring Cortical Thickness Using An Image Domain Local Surface Model And Topology Preserving Segmentation (2007) (3)
- Relating High-Dimensional Structural Networks to Resting Functional Connectivity with Sparse Canonical Correlation Analysis for Neuroimaging (2018) (3)
- Hierarchy-guided Neural Networks for Species Classification (2021) (3)
- Building an atlas of hippocampal subfields using postmortem MRI (2008) (2)
- Gridding Graphic Graticules (2007) (2)
- Single-Subject Structural Networks with Closed-Form Rotation Invariant Matching Improve Power in Developmental Studies of the Cortex (2014) (2)
- Statistical bias in optimized VBM (2013) (2)
- The TVDMFFDVR Algorithm (2012) (2)
- “Nonparametric Local Smoothing” is not image registration (2012) (2)
- A patch-based framework for new ITK functionality: Joint fusion, denoising, and non-local super-resolution (2017) (2)
- Partial sparse canonical correlation analysis (PSCCA) for population studies in medical imaging (2012) (2)
- Analyzing Effects of Intra-Uterine Cocaine Exposure on Adolescent Brain Structure with Symmetric Diffeomorphisms (2006) (1)
- Spatial correspondence based asymmetry analysis in FMRI (2008) (1)
- Deep Volumetric Feature Encoding for Biomedical Images (2020) (1)
- An HPC Pipeline with Validation Framework for Small Animal Multivariate Brain Analysis (SAMBA) (2017) (1)
- Using Region Trajectories to Construct an Accurate and Efficient Polyaffine Transform Model (2013) (1)
- A semi-automated solution for increasing the reliability of manually defined visual area boundaries (2010) (1)
- Quantification of left ventricular deformation fields from undersampled radial, real-time cardiac MRI (2014) (1)
- Longitudinal assessment of treatment effects on pulmonary ventilation using 1H/3He MRI multivariate templates (2013) (1)
- “Nonparametric Local Smoothing” is not image registration (2012) (1)
- Simulated Diffusion-Weighted Imaging for the ITK Masses (2011) (1)
- Hierarchy‐guided neural network for species classification (2021) (1)
- EarlyStressIsAssociatedwithAlterationsinthe OrbitofrontalCortex:ATensor-BasedMorphometry InvestigationofBrainStructureandBehavioralRisk (2010) (0)
- Associations between socioeconomic status and cortical thickness in prefrontal cortical subregions (2012) (0)
- Robust rotations between anatomical curves (2002) (0)
- Deep volumetric super‐resolution improves the detection of amyloid‐related cross‐sectional group differences in MCI (2020) (0)
- Alterations in ectopic myocardial contraction assessed using real-time MRI (2016) (0)
- Associations between localized variation in brain anatomy and social behavior in healthy human subjects (2013) (0)
- Impact of Tool Use on brain development of non-human primates (2013) (0)
- Effect of Socioeconomic Status (SES) Disparity on Neural Development in Female African-American Infants at 1 Month (2020) (0)
- Corrigendum to: Neuroconductor: an R platform for medical imaging analysis. (2020) (0)
- Three-Dimensional Interactive Vascular Postprocessing Techniques: Industrial Perspective (2003) (0)
- Small Animal Multivariate Brain Analysis (SAMBA) – a High Throughput Pipeline with a Validation Framework (2018) (0)
- Medical Image Computing and Computer-Assisted Intervention Multivariate Analysis of Structural and Diffusi Imaging in Traumatic Brain Injur 1 (2008) (0)
- 6402 Decomposing cerebral blood flow MRI into functional and structural components (2013) (0)
- ANTsX neuroimaging-derived structural phenotypes of UK Biobank (2023) (0)
- Examining the relationship between cerebral blood flood and grey matter structure in typically developing children (0)
- The Power of Multimodal Neuroimaging Biomarkers for Clinical Trial Screening (P06.034) (2013) (0)
- Genetic & Neuroanatomic Associations in Sporadic Frontotemporal Lobar Degeneration (I5-1.002) (2014) (0)
- Entorhinal cortical thickness, ApoE4 status, and cognitive decline in ADNI participants (2015) (0)
- Automatic Measurement of Atrophy Rates in Hippocampal Subfields from Longitudinal High-Resolution T 2-weighted MRI (2010) (0)
- CAP Cardiac MICCAI 2013 - Individual Images (2013) (0)
- Sentence Quantifier Comprehension Measure (2015) (0)
- Correction: A Digital Atlas of the Dog Brain (2013) (0)
- Pseudo-Continuous Arterial Spin Labeling is Sensitive to Changes in Cerebral Blood Flow in Semantic Variant Primary Progressive Aphasia and Non-fluent/Agrammatic Primary Progressive Aphasia (P5.004) (2015) (0)
- Entorhinal cortical thickness, ApoE-e4 status, and cognitive decline in ADNI participants (2015) (0)
- Image- vs. histogram-based considerations in semantic segmentation of pulmonary hyperpolarized gas images (2021) (0)
- A preliminary study of hippocampal subfield atrophy using the ADNI dataset (2009) (0)
- Computing Match Functions for Curves in R2 and R3 by Refining Polyline Approximations (2001) (0)
- 4-D segmentation and normalization of 3He MR images for intrasubject assessment of ventilated lung volumes (2012) (0)
- StructuralVariationsinPrefrontalCortexMediatethe RelationshipbetweenEarlyChildhoodStressandSpatial WorkingMemory (2012) (0)
- Escher's Ants as Metaphor: Topological Marching for the Well-Composed, Genus Zero Crowd (2010) (0)
- 6th Annual Meeting of the Organization for Human Brain Mapping Structural Connectivity Mapping via the Tensor-based Morphometry (2010) (0)
- Quantitation of Pulmonary Structure via Registration and Normalization of Serial 3 He MR Images (2006) (0)
- Practical applications of machine learning in imaging trials (2021) (0)
- Optimal Symmetric Multimodal Templates and Concatenated Random Forests for Supervised Brain Tumor Segmentation (Simplified) with ANTsR (2014) (0)
- Reproducibility of functional network metrics and network structure: A comparison of task-related BOLD, resting ASL with BOLD contrast, and resting cerebral blood flow (2013) (0)
- Application of Aligned-UMAP to longitudinal biomedical studies (2022) (0)
- Distinct longitudinal cortical change in frontotemporal lobar degeneration and Alzheimer ' s disease (2011) (0)
- Evaluation of a Symmetric Diffeomorphic Registration Algorithm for Analyzing Neurodegenerative Disease (2006) (0)
- [Book] Insight Into Images Principles And Practice For Segmentation Registration And Image Analysis (2021) (0)
- MRI-based biomarkers from hippocampal subfields: Advances in automatic labeling, longitudinal atrophy estimation and postmortem anatomical atlas (2011) (0)
- Registration workflows for the creation of INCF digital atlas hubs (2012) (0)
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What Schools Are Affiliated With Brian B. Avants?
Brian B. Avants is affiliated with the following schools:
