Bruce W. Birren | Academic Influence

Q: What Schools Are Affiliated With Bruce W. Birren

Bruce W. Birren is affiliated with the following schools: California Institute of Technology, Massachusetts Institute of Technology, Michigan State University, Purdue University, Johns Hopkins University, Virginia Tech

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Bruce W. Birren's Published Works

Number of citations in a given year to any of this author's works

Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author

Published Works

Initial sequencing and analysis of the human genome. (2001) (15222)
Full-length transcriptome assembly from RNA-Seq data without a reference genome. (2011) (12944)
Structure, Function and Diversity of the Healthy Human Microbiome (2012) (8630)
Initial sequencing and comparative analysis of the mouse genome. (2002) (4609)
A second generation human haplotype map of over 3.1 million SNPs (2007) (4567)
Trinity: reconstructing a full-length transcriptome without a genome from RNA-Seq data (2011) (3744)
Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons. (2011) (2867)
A framework for human microbiome research (2012) (2113)
Sequencing and comparison of yeast species to identify genes and regulatory elements (2003) (1920)
Genome duplication in the teleost fish Tetraodon nigroviridis reveals the early vertebrate proto-karyotype (2004) (1905)
The genome sequence of the filamentous fungus Neurospora crassa (2003) (1654)
Cloning and stable maintenance of 300-kilobase-pair fragments of human DNA in Escherichia coli using an F-factor-based vector. (1992) (1633)
Proof and evolutionary analysis of ancient genome duplication in the yeast Saccharomyces cerevisiae (2004) (1510)
The genome sequence of the rice blast fungus Magnaporthe grisea (2005) (1509)
Genomic analysis identifies association of Fusobacterium with colorectal carcinoma. (2012) (1492)
Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae (2005) (1321)
Genomic surveillance elucidates Ebola virus origin and transmission during the 2014 outbreak (2014) (1126)
Genome Sequence of Aedes aegypti, a Major Arbovirus Vector (2007) (1110)
Insights from the genome of the biotrophic fungal plant pathogen Ustilago maydis (2006) (1101)
Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea (2017) (990)
Evolution of pathogenicity and sexual reproduction in eight Candida genomes (2009) (929)
An STS-Based Map of the Human Genome (1995) (818)
The Fusarium graminearum Genome Reveals a Link Between Localized Polymorphism and Pathogen Specialization (2007) (815)
Lifestyle transitions in plant pathogenic Colletotrichum fungi deciphered by genome and transcriptome analyses (2012) (725)
A Catalog of Reference Genomes from the Human Microbiome (2010) (683)
Insights into Secondary Metabolism from a Global Analysis of Prokaryotic Biosynthetic Gene Clusters (2014) (677)
Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications (2011) (588)
The genome of M. acetivorans reveals extensive metabolic and physiological diversity. (2002) (573)
Dynamics of Pseudomonas aeruginosa genome evolution (2008) (481)
Highly evolvable malaria vectors: The genomes of 16 Anopheles mosquitoes (2014) (463)
Comparative Functional Genomics of the Fission Yeasts (2011) (439)
Disruption of the nuclear hormone receptor RORα in staggerer mice (1996) (436)
Sequencing of Culex quinquefasciatus Establishes a Platform for Mosquito Comparative Genomics (2010) (434)
Construction and characterization of a human bacterial artificial chromosome library. (1996) (433)
Genome Project Standards in a New Era of Sequencing (2009) (422)
Insights into evolution of multicellular fungi from the assembled chromosomes of the mushroom Coprinopsis cinerea (Coprinus cinereus) (2010) (391)
Genomic insights into the Ixodes scapularis tick vector of Lyme disease (2016) (391)
Genomic Analysis Identifies Targets of Convergent Positive Selection in Drug Resistant Mycobacterium tuberculosis (2013) (380)
The Human Microbiome Project: A Community Resource for the Healthy Human Microbiome (2012) (378)
An azoospermic man with a de novo point mutation in the Y-chromosomal gene USP9Y (1999) (371)
Whole Genome Deep Sequencing of HIV-1 Reveals the Impact of Early Minor Variants Upon Immune Recognition During Acute Infection (2012) (350)
Genomic Analysis of the Basal Lineage Fungus Rhizopus oryzae Reveals a Whole-Genome Duplication (2009) (341)
Emergence of Epidemic Multidrug-Resistant Enterococcus faecium from Animal and Commensal Strains (2013) (320)
A genome-wide map of diversity in Plasmodium falciparum (2007) (311)
Comparative genomic analyses of the human fungal pathogens Coccidioides and their relatives. (2009) (300)
The mouse pudgy mutation disrupts Delta homologue Dll3 and initiation of early somite boundaries (1998) (291)
Genetic Diversity and Protective Efficacy of the RTS,S/AS01 Malaria Vaccine. (2015) (287)
Evaluation of 16S rDNA-Based Community Profiling for Human Microbiome Research (2012) (282)
Stable propagation of cosmid sized human DNA inserts in an F factor based vector. (1992) (273)
Comparative Genomics of Enterococci: Variation in Enterococcus faecalis, Clade Structure in E. faecium, and Defining Characteristics of E. gallinarum and E. casseliflavus (2012) (272)
Genomic epidemiology of the Escherichia coli O104:H4 outbreaks in Europe, 2011 (2012) (270)
Dothideomycete–Plant Interactions Illuminated by Genome Sequencing and EST Analysis of the Wheat Pathogen Stagonospora nodorum[W][OA] (2007) (262)
Ebola Virus Epidemiology, Transmission, and Evolution during Seven Months in Sierra Leone (2015) (262)
Pulsed field gel electrophoresis. A practical guide. (1993) (260)
Whole Genome Amplification and De novo Assembly of Single Bacterial Cells (2009) (253)
The malaria parasite Plasmodium vivax exhibits greater genetic diversity than Plasmodium falciparum (2012) (247)
The complete genome and proteome of Mycoplasma mobile. (2004) (245)
Dynamics of Dengue Disease Severity Determined by the Interplay Between Viral Genetics and Serotype-Specific Immunity (2011) (244)
Lymphopenia in the BB rat model of type 1 diabetes is due to a mutation in a novel immune-associated nucleotide (Ian)-related gene. (2002) (237)
How deep is deep enough for RNA-Seq profiling of bacterial transcriptomes? (2012) (222)
Genome-wide detection and characterization of positive selection in human populations (2007) (217)
Evolution of Extensively Drug-Resistant Tuberculosis over Four Decades: Whole Genome Sequencing and Dating Analysis of Mycobacterium tuberculosis Isolates from KwaZulu-Natal (2015) (216)
Efficient and robust RNA-seq process for cultured bacteria and complex community transcriptomes (2012) (208)
Campomelic dysplasia translocation breakpoints are scattered over 1 Mb proximal to SOX9: evidence for an extended control region. (1999) (208)
Clinical Sequencing Uncovers Origins and Evolution of Lassa Virus (2015) (207)
Genomics of the fungal kingdom: insights into eukaryotic biology. (2005) (202)
Mobile genes in the human microbiome are structured from global to individual scales (2016) (200)
Genomic analysis of globally diverse Mycobacterium tuberculosis strains provides insights into emergence and spread of multidrug resistance (2017) (200)
Enabling a community to dissect an organism: overview of the Neurospora functional genomics project. (2007) (198)
Assembly of polymorphic genomes: algorithms and application to Ciona savignyi. (2005) (197)
Transformation of Escherichia coli with large DNA molecules by electroporation. (1995) (196)
Comparative Genome Analysis of Trichophyton rubrum and Related Dermatophytes Reveals Candidate Genes Involved in Infection (2012) (189)
Disruption of the nuclear hormone receptor RORalpha in staggerer mice. (1996) (186)
Genome Variation in Cryptococcus gattii, an Emerging Pathogen of Immunocompetent Hosts (2011) (184)
Sub-clinical detection of gut microbial biomarkers of obesity and type 2 diabetes (2016) (184)
Population genomic sequencing of Coccidioides fungi reveals recent hybridization and transposon control. (2010) (172)
Short-term genome evolution of Listeria monocytogenes in a non-controlled environment (2008) (169)
Structure and Architecture of the Maize Genome1[W] (2005) (167)
Molecular complexity of successive bacterial epidemics deconvoluted by comparative pathogenomics (2010) (160)
Genomics of Loa loa, a Wolbachia-free filarial parasite of humans (2013) (158)
Comparative Genomic Analysis of Human Fungal Pathogens Causing Paracoccidioidomycosis (2011) (156)
Genomic patterns of pathogen evolution revealed by comparison of Burkholderia pseudomallei, the causative agent of melioidosis, to avirulent Burkholderia thailandensis (2006) (156)
Population genomics studies identify signatures of global dispersal and drug resistance in Plasmodium vivax (2016) (150)
Patterns of Intron Gain and Loss in Fungi (2004) (144)
Emergence of the Asian 1 Genotype of Dengue Virus Serotype 2 in Viet Nam: In Vivo Fitness Advantage and Lineage Replacement in South-East Asia (2010) (144)
Comparative Genomics of Vancomycin-Resistant Staphylococcus aureus Strains and Their Positions within the Clade Most Commonly Associated with Methicillin-Resistant S. aureus Hospital-Acquired Infection in the United States (2012) (144)
Pathogenomics of Culex quinquefasciatus and Meta-Analysis of Infection Responses to Diverse Pathogens (2010) (143)
The 1.4-Mb CMT1A duplication/HNPP deletion genomic region reveals unique genome architectural features and provides insights into the recent evolution of new genes. (2001) (140)
DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage (2006) (138)
Distinct forms of the beta subunit of GTP-binding regulatory proteins identified by molecular cloning. (1987) (135)
Genomic and functional analyses of Mycobacterium tuberculosis strains implicate ald in D-cycloserine resistance (2016) (134)
A comparative genomics multitool for scientific discovery and conservation (2020) (133)
Nonmammalian genomic analysis : a practical guide (1996) (133)
Comparative Genomic Characterization of Francisella tularensis Strains Belonging to Low and High Virulence Subspecies (2009) (132)
Enhanced methods for unbiased deep sequencing of Lassa and Ebola RNA viruses from clinical and biological samples (2014) (129)
Genome analysis of three Pneumocystis species reveals adaptation mechanisms to life exclusively in mammalian hosts (2016) (126)
Highly Sensitive and Specific Detection of Rare Variants in Mixed Viral Populations from Massively Parallel Sequence Data (2012) (124)
Genome-wide SNP genotyping highlights the role of natural selection in Plasmodium falciparum population divergence (2008) (124)
Genomics of the fungal kingdom: Insights into eukaryotic biology (2005) (123)
Comparative and Functional Genomics of Rhodococcus opacus PD630 for Biofuels Development (2011) (123)
Sequence and comparative analysis of the mouse 1-megabase region orthologous to the human 11p15 imprinted domain. (2000) (122)
The Role of Selection in Shaping Diversity of Natural M. tuberculosis Populations (2013) (122)
Uneven chromosome contraction and expansion in the maize genome. (2006) (120)
The Early Whole-Blood Transcriptional Signature of Dengue Virus and Features Associated with Progression to Dengue Shock Syndrome in Vietnamese Children and Young Adults (2010) (118)
Optimized conditions for pulsed field gel electrophoretic separations of DNA. (1988) (117)
Pulsed field gel electrophoresis. (1989) (116)
Multi-institute analysis of carbapenem resistance reveals remarkable diversity, unexplained mechanisms, and limited clonal outbreaks (2017) (115)
Serrate2 is disrupted in the mouse limb-development mutant syndactylism (1997) (113)
Methods in Comparative Genomics: Genome Correspondence, Gene Identification and Regulatory Motif Discovery (2004) (113)
The “Most Wanted” Taxa from the Human Microbiome for Whole Genome Sequencing (2012) (110)
Structure of the germline genome of Tetrahymena thermophila and relationship to the massively rearranged somatic genome (2016) (109)
The draft genome sequence of the ferret (Mustela putorius furo) facilitates study of human respiratory disease (2014) (106)
Longitudinal genomic surveillance of Plasmodium falciparum malaria parasites reveals complex genomic architecture of emerging artemisinin resistance (2016) (106)
Erratum: Initial sequencing and analysis of the human genome: International Human Genome Sequencing Consortium (Nature (2001) 409 (860-921)) (2001) (106)
Analysis of the cat eye syndrome critical region in humans and the region of conserved synteny in mice: a search for candidate genes at or near the human chromosome 22 pericentromere. (2001) (103)
Mutations affecting the regulation of transcription of the cytochrome P1-450 gene in the mouse Hepa-1 cell line. (1985) (100)
Endemic Dengue Associated with the Co-Circulation of Multiple Viral Lineages and Localized Density-Dependent Transmission (2011) (97)
Hybrid selection for sequencing pathogen genomes from clinical samples (2011) (96)
Structure and evolution of the Smith-Magenis syndrome repeat gene clusters, SMS-REPs. (2002) (94)
A novel instrument for separating large DNA molecules with pulsed homogeneous electric fields. (1988) (94)
A novel member of the F-box/WD40 gene family, encoding dactylin, is disrupted in the mouse dactylaplasia mutant (1999) (90)
A YAC-based physical map of the mouse genome (1999) (88)
High-Quality Draft Genome Sequences of 28 Enterococcus sp. Isolates (2010) (88)
DNA sequence and analysis of human chromosome 8 (2006) (83)
Analysis of High-Throughput Sequencing and Annotation Strategies for Phage Genomes (2010) (81)
Human chromosome 11 DNA sequence and analysis including novel gene identification (2006) (81)
Identification and Functional Validation of the Novel Antimalarial Resistance Locus PF10_0355 in Plasmodium falciparum (2011) (80)
Evolution of Invasion in a Diverse Set of Fusobacterium Species (2014) (78)
Analysis of the DNA sequence and duplication history of human chromosome 15 (2006) (73)
Sensitive, specific polymorphism discovery in bacteria using massively parallel sequencing (2008) (69)
Rat metallothionein-1 structural gene and three pseudogenes, one of which contains 5'-regulatory sequences (1986) (67)
The hormonal regulation of gene expression of glial markers: Glutamine synthetase and glycerol phosphate dehydrogenase in primary cultures of rat brain and in C6 cell line (1986) (65)
Human genome anatomy: BACs integrating the genetic and cytogenetic maps for bridging genome and biomedicine. (1999) (64)
The fungal genome initiative and lessons learned from genome sequencing. (2010) (64)
A High-Density Single Nucleotide Polymorphism Map for Neurospora crassa (2009) (60)
Pulsed-field gel electrophoresis. (1996) (58)
Evolutionary Dynamics of the Accessory Genome of Listeria monocytogenes (2013) (56)
High-Resolution Analysis of Intrahost Genetic Diversity in Dengue Virus Serotype 1 Infection Identifies Mixed Infections (2012) (55)
Levels of metallothionein messenger RNA in foetal, neonatal and maternal rat liver. (1983) (54)
Molecular cloning of the rat metallothionein 1 (MT-1) mRNA sequence. (1983) (53)
Regulation of the rat metallothionein-I gene by sodium butyrate. (1986) (51)
A bacterial artificial chromosome-based framework contig map of human chromosome 22q. (1996) (50)
SERPINB12 Is a Novel Member of the Human ov-serpin Family That Is Widely Expressed and Inhibits Trypsin-like Serine Proteinases* (2001) (46)
Ier5, a novel member of the slow-kinetics immediate-early genes. (1999) (44)
DNA sequence and analysis of human chromosome 18 (2005) (43)
A High-Density SNP Map for Neurospora crassa (2008) (43)
Correction: Corrigendum: Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea (2018) (43)
Pathogen discovery from human tissue by sequence-based computational subtraction. (2003) (42)
Mouse molecular cytogenetic resource: 157 BACs link the chromosomal and genetic maps. (1999) (42)
Whole-Genome Sequencing of Mycobacterium tuberculosis Provides Insight into the Evolution and Genetic Composition of Drug-Resistant Tuberculosis in Belarus (2016) (42)
Endurance, Refuge, and Reemergence of Dengue Virus Type 2, Puerto Rico, 1986–2007 (2011) (41)
Molecular evolution of West Nile virus in a northern temperate region: Connecticut, USA 1999-2008. (2011) (41)
Whole genome pyrosequencing of rare hepatitis C virus genotypes enhances subtype classification and identification of naturally occurring drug resistance variants. (2013) (40)
Fluid Spatial Dynamics of West Nile Virus in the United States: Rapid Spread in a Permissive Host Environment (2015) (40)
Genetic Diversity and Protective Efficacy of the RTS , S / AS 01 Malaria Vaccine (2015) (39)
Metallothionein synthesis in foetal, neonatal and maternal rat liver. (1983) (38)
Electrophoresis of Large DNA Molecules: Theory and Applications (1991) (37)
Correction: Disruption of the nuclear hormone receptor RORα in staggerer mice (Nature Journal (1996) 379 (736-739)) (1996) (36)
Standardized Metadata for Human Pathogen/Vector Genomic Sequences (2014) (35)
Pulsed field gel electrophoresis techniques for separating 1- to 50-kilobase DNA fragments. (1989) (35)
Integration of cytogenetic with recombinational and physical maps of mouse chromosome 16. (1999) (34)
Mapping of Myxococcus xanthus Social Motility dsp Mutations to the dif Genes (2002) (33)
Probing Plasmodium falciparum sexual commitment at the single-cell level (2018) (32)
Correction: Corrigendum: Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea (2018) (31)
Gene-targeted metagenomic analysis of glucan-branching enzyme gene profiles among human and animal fecal microbiota (2013) (31)
Genome Sequences of Three Phytopathogenic Species of the Magnaporthaceae Family of Fungi (2015) (31)
Independent Large Scale Duplications in Multiple M. tuberculosis Lineages Overlapping the Same Genomic Region (2012) (30)
Butyrate-induced changes in nuclease sensitivity of chromatin cannot be correlated with transcriptional activation (1987) (29)
16S rRNA Gene Survey of Microbial Communities in Winogradsky Columns (2014) (29)
Probing Plasmodium falciparum sexual commitment at the single-cell level. (2018) (29)
Genome Sequence of the Pathogenic Fungus Sporothrix schenckii (ATCC 58251) (2014) (28)
Erratum: Sequence and comparative analysis of the mouse 1-megabase region orthologous to the human 11p15 imprinted domain (Genome Reasearch (2000) vol. 10 (1697-1710)) (2001) (28)
Genetic diversity and lineage dynamic of dengue virus serotype 1 (DENV-1) in Cambodia. (2013) (28)
Staphylococcal enterotoxin P predicts bacteremia in hospitalized patients colonized with methicillin-resistant Staphylococcus aureus. (2014) (27)
Autosomal recessive spastic ataxia of Charlevoix-Saguenay (ARSACS): high-resolution physical and transcript map of the candidate region in chromosome region 13q11. (1999) (27)
Pseudomonas aeruginosa PAO1 bacterial artificial chromosomes: strategies for mapping, screening, and sequencing 100 kb loci of the 5.9 Mb genome. (1998) (26)
Disruption of the nuclear hormone receptor RORα in staggerer mice (1996) (26)
Draft Genome Sequence of the Cellulolytic Fungus Chaetomium globosum (2015) (26)
Populations of latent Mycobacterium tuberculosis lack a cell wall: Isolation, visualization, and whole-genome characterization (2016) (26)
CHAPTER 7 – FIELD INVERSION GEL ELECTROPHORESIS (1993) (24)
Rapid pulsed field separation of DNA molecules up to 250 kb. (1994) (24)
Extensive global movement of multidrug-resistant M. tuberculosis strains revealed by whole-genome analysis (2019) (22)
Pulsed field gel electrophoresis: Studies of DNA migration made with the programmable, autonomously‐controlled electrode electrophoresis system (1989) (22)
Genomic representations using concatenates of Type IIB restriction endonuclease digestion fragments. (2004) (22)
A phylogenetic analysis using full-length viral genomes of South American dengue serotype 3 in consecutive Venezuelan outbreaks reveals a novel NS5 mutation. (2011) (20)
Perfect conserved linkage across the entire mouse chromosome 10 region homologous to human chromosome 21. (1999) (20)
Reemergence and decline of dengue virus serotype 3 in Puerto Rico. (2012) (18)
Molecular linkage of the mouse CD5 and CD6 genes. (1996) (17)
The gene for death agonist BID maps to the region of human 22q11.2 duplicated in cat eye syndrome chromosomes and to mouse chromosome 6. (1998) (17)
Bacterial artificial chromosome (BAC) library as a tool for physical mapping of the archaeon Methanosarcina thermophila TM-1. (1997) (17)
CHAPTER 3 – PREPARATION OF DNA FOR PULSED FIELD ANALYSIS (1993) (16)
Whole-genome comparative annotation and regulatory motif discovery in multiple yeast species (2003) (16)
Ultraviolet nicking of large DNA molecules from pulsed-field gels for southern transfer and hybridization. (1991) (15)
Complex dynamic of dengue virus serotypes 2 and 3 in Cambodia following series of climate disasters. (2013) (14)
PriSM: a primer selection and matching tool for amplification and sequencing of viral genomes (2011) (13)
Comparative and Functional Genomics of Rhodococcus opacus PD 630 for Biofuels Development (2011) (13)
Fungal Genome Initiative White Paper developed by the Fungal Research Community February 8 , 2002 (2002) (13)
The basis of high resolution separation of small DNAs by asymmetric-voltage field inversion electrophoresis and its application to DNA sequencing gels. (1990) (13)
Methods in comparative genomics: genome correspondence, gene identification and motif discovery (2003) (13)
Correction: The Role of Selection in Shaping Diversity of Natural M. tuberculosis Populations (2013) (13)
Selection of chromosome 22-specific clones from human genomic BAC library using a chromosome-specific cosmid library pool. (1994) (12)
A set of reference sequences for the hepatitis C genotypes 4d, 4f, and 4k covering the full open reading frame (2008) (12)
How deep is deep enough for RNA-Seq profiling of bacterial transcriptomes? (2012) (11)
The “Minimum Information about an ENvironmental Sequence” (MIENS) specification (2010) (11)
and their relatives Coccidioides Comparative genomic analyses of the human fungal pathogens (2009) (11)
A human chromosome 22 fosmid resource: mapping and analysis of 96 clones. (1996) (10)
A haplotype map of the human genome The International HapMap Consortium (2005) (10)
Rat metallothionein multigene family. (1987) (10)
Distinct Forms of the ß Subunit of GTP-Binding Regulatory Proteins Identified by Molecular (9)
Leveraging Base Pair Mammalian Constraint to Understand Genetic Variation and Human Disease (2023) (9)
P09-20 LB. Ultra-deep sequencing of full-length HIV-1 genomes identifies rapid viral evolution during acute infection (2009) (8)
Review article: HCV ? STAT-C era of therapy (2010) (8)
Evaluation of bacterial ribosomal RNA (rRNA) depletion methods for sequencing microbial community transcriptomes (2010) (8)
Evolutionary constraint and innovation across hundreds of placental mammals (2023) (8)
Molecular linkage of the mouseCD5 andCD6 genes (2007) (7)
ProphET, Prophage Estimation Tool: a standalone prophage sequence prediction tool with self-updating reference database (2017) (7)
Evolution of extensively drug-resistant tuberculosis over four decades revealed by whole genome sequencing of Mycobacterium tuberculosis from KwaZulu-Natal, South Africa (2015) (7)
Relaxation intervals alter the mobility of large DNA molecules in pulsed field gel electrophoresis. (1988) (7)
Use of secondary pulsed field gel electrophoresis in separation of large DNA. (1995) (6)
Evolution of the ancestral mammalian karyotype and syntenic regions (2022) (6)
High quality draft genome sequence of Segniliparus rugosus CDC 945T= (ATCC BAA-974T) (2011) (6)
0355 in Plasmodium falciparum (2011) (6)
CHAPTER 6 – SWITCH INTERVALS AND RESOLUTION IN PULSED FIELD GELS (1993) (5)
Comparative analysis of an emerging fungal pathogen , Aspergillus terreus (2004) (5)
Fungal Genome Initiative A White Paper for Fungal Comparative Genomics June 10 , 2003 (2003) (4)
Probing Plasmodium falciparum sexual commitment at the single-cell level. (2018) (4)
1 – Introduction to Pulsed-Field Gels and Preparation and Analysis of Large DNA (1996) (4)
Draft Genome Sequences of Two Extensively Drug-Resistant Strains of Mycobacterium tuberculosis Belonging to the Euro-American S Lineage (2016) (4)
Corrigendum: Mobile genes in the human microbiome are structured from global to individual scales (2017) (4)
Reply to Guy et al.: Support for a bottleneck in the 2011 Escherichia coli O104:H4 outbreak in Germany (2012) (3)
Sensitive population profiling and genome assembly of HIV and Flaviviruses using ultra-deep sequencing technologies (2010) (3)
The functional and evolutionary impacts of human-specific deletions in conserved elements (2023) (3)
Endurance, Refuge, and Reemergence of Dengue Virus (2011) (3)
CHAPTER 1 – INTRODUCTION TO CONVENTIONAL AND PULSED FIELD GEL ELECTROPHORESIS (1993) (3)
TBCAP; tuberculosis annotation project. (2013) (3)
Sequencing the Phytophthora infestans genome: preliminary studies (2005) (2)
The contribution of historical processes to contemporary extinction risk in placental mammals (2023) (2)
Insights into mammalian TE diversity through the curation of 248 genome assemblies (2023) (2)
Mammalian evolution of human cis-regulatory elements and transcription factor binding sites (2023) (2)
Corrigendum: DNA sequence and analysis of human chromosome 18 (2005) (2)
CHAPTER 8 – VARIABLES THAT AFFECT PULSED FIELD GELS (1993) (1)
Enhanced methods for unbiased deep sequencing of Lassa and Ebola RNA viruses from clinical and biological samples (2014) (1)
Efficient and robust RNA-seq process for cultured bacteria and complex community transcriptomes (2012) (1)
CHAPTER 10 – SPECIAL APPLICATIONS (1993) (1)
Comparative genomics of Balto, a famous historic dog, captures lost diversity of 1920s sled dogs (2023) (1)
CHAPTER 2 – SETTING UP A PULSED FIELD GEL ELECTROPHORESIS SYSTEM (1993) (1)
Keynote Lectures (KL) (2017) (0)
An integrated BAC/PAC molecular cytogenetic resource for human genetics: Applications to disease (1996) (0)
Edinburgh Research Explorer A set of reference sequences for the hepatitis C genotypes 4d, 4f, and 4k covering the full open reading frame (2018) (0)
CHAPTER 11 – TROUBLE SHOOTING (1993) (0)
Sub-clinical detection of gut microbial biomarkers of obesity and type 2 diabetes (2016) (0)
Environmental vs. Genetic Influence on the Intestinal Microbiome of Monozygotic and Dizygotic Twins (2011) (0)
Erratum to “Pathogen discovery from human tissue by sequence-based computational subtraction” ☆: [Genomics 81 (2003) 329–335]☆ (2003) (0)
TEXT S1 Materials and Methods text and supplemental figures. Download (2011) (0)
Ciona savignyi Assembly of polymorphic genomes : Algorithms and application to data (2005) (0)
Probing Plasmodium falciparum sexual commitment at the single-cell level. (2018) (0)
Bioinformatics Structure and Architecture of the Maize Genome 1 [ W ] (2005) (0)
CHAPTER 5 – RESTRICTION ENZYME DIGESTION OF LARGE DNA FRAGMENTS IN AGAROSE (1993) (0)
Supporting Online Material for Comparative Functional Genomics of the Fission Yeasts (2011) (0)
3 POPULATIONAL ANALYSIS REVEALS A LINK BETWEEN COMPLEX VIRAL ESCAPE FROM CD8+ T-CELL RESPONSES AND PROTECTION IN HCV INFECTION (2011) (0)
CHAPTER 4 – POURING GELS AND HANDLING SAMPLES (1993) (0)
Longitudinal genomic surveillance of Plasmodium falciparum malaria parasites reveals complex genomic architecture of emerging artemisinin resistance (2017) (0)
DISCUSSION OF THE PAPER (1994) (0)
The rice blast story: From genome sequence to function (2008) (0)
CHAPTER 9 – SOUTHERN BLOT ANALYSIS OF PULSED FIELD GELS (1993) (0)
An integrated somatic cell hybrid, YAC, and BAC map of the Rmc1 region of mouse chromosome 1. (1999) (0)
PLOS Medicine Evolution of extensively drug-resistant tuberculosis over four decades revealed by whole genome sequencing of Mycobacterium tuberculosis from KwaZulu-Natal, South Africa (2015) (0)
Automatic control system which optimises electrophoretic separation (1991) (0)
An Integrated BAC/PAC Resource for identifying chromosomal abnormalities in solid tumors (2000) (0)
Thebasis ofhighresolution separation ofsmall DNAsby asymmetric-volta ge field inversion electrophoresis andits application toDNAsequencing gels (1990) (0)
recent hybridization and transposon control fungi reveals Coccidioides Population genomic sequencing of Material (2010) (0)
Leveraging base-pair mammalian constraint to understand genetic variation and human disease. (2023) (0)
TABLE S1 C. gattii genome statistics. (2011) (0)
Method and system, computer-assisted, to improve the electrophoretic separation of macromolecules, including the DNA. (1991) (0)
Origins of a 350-Kilobase Genomic Duplication in Mycobacterium tuberculosis and Its Impact on Virulence (2014) (0)
COMPARATIVE LONGITUDINAL POPULATION GENOMIC SURVEYS OF PLASMODIUM FALCIPARUM MALARIA PARASITES IN FRENCH GUIANA AND THAILAND (2017) (0)
Proposal for Construction of an Aplysia californica BAC Library (2003) (0)

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What Schools Are Affiliated With Bruce W. Birren?

Bruce W. Birren is affiliated with the following schools: