Cajo ter Braak
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Cajo ter Braakmathematics Degrees
Mathematics
#8152
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#11073
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Statistics
#1128
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#1233
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Measure Theory
#3252
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#3845
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Mathematics
Cajo ter Braak's Degrees
- PhD Statistics University of Amsterdam
- Masters Mathematics University of Amsterdam
- Bachelors Mathematics University of Amsterdam
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(Suggest an Edit or Addition)Cajo ter Braak's Published Works
Number of citations in a given year to any of this author's works
Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- Accelerating Markov Chain Monte Carlo Simulation by Differential Evolution with Self-Adaptive Randomized Subspace Sampling (2009) (930)
- Permutation tests for multi-factorial analysis of variance (2003) (890)
- A large-scale evaluation of computational protein function prediction (2013) (784)
- Treatment of input uncertainty in hydrologic modeling: Doing hydrology backward with Markov chain Monte Carlo simulation (2008) (737)
- A Markov Chain Monte Carlo version of the genetic algorithm Differential Evolution: easy Bayesian computing for real parameter spaces (2006) (717)
- Toward Ecologically Scaled Landscape Indices (2001) (423)
- Testing the significance of canonical axes in redundancy analysis (2011) (415)
- Differential Evolution Markov Chain with snooker updater and fewer chains (2008) (403)
- Combining the fourth-corner and the RLQ methods for assessing trait responses to environmental variation. (2014) (378)
- Arthropod assemblages are best predicted by plant species composition. (2008) (354)
- Reset of a critically disturbed microbial ecosystem: faecal transplant in recurrent Clostridium difficile infection (2014) (173)
- Selecting traits that explain species–environment relationships: a generalized linear mixed model approach (2013) (138)
- Improved testing of species traits--environment relationships in the fourth-corner problem. (2012) (135)
- Relationship between epiphytic lichens, trace elements and gaseous atmospheric pollutants. (2001) (131)
- Laser range finder model for autonomous navigation of a robot in a maize field using a particle filter (2014) (119)
- Bayesian analysis of complex traits in pedigreed plant populations (2008) (116)
- Linking trait variation to the environment: critical issues with community‐weighted mean correlation resolved by the fourth‐corner approach (2017) (104)
- Bayesian Markov Random Field Analysis for Protein Function Prediction Based on Network Data (2010) (95)
- Extending Xu's Bayesian Model for Estimating Polygenic Effects Using Markers of the Entire Genome (2005) (88)
- Principal response curves technique for the analysis of multivariate biomonitoring time series (2009) (85)
- Early plant recruitment stages set the template for the development of vegetation patterns along a hydrological gradient (2015) (83)
- Statistical aspects of environmental risk assessment of GM plants for effects on non-target organisms. (2009) (66)
- Gene Regulatory Networks from Multifactorial Perturbations Using Graphical Lasso: Application to the DREAM4 Challenge (2010) (62)
- Risk assessment of dietary exposure to pesticides using a Bayesian method. (2005) (50)
- An automated system for the recognition of various specific rat behaviours (2013) (48)
- Multivariate analysis of stress in experimental ecosystems by Principal Response Curves and similarity analysis (1998) (46)
- Changes in large-scale patterns of plant biodiversity predicted from environmental economic scenarios (2003) (45)
- QTL linkage analysis of connected populations using ancestral marker and pedigree information (2012) (43)
- A penalized likelihood method for mapping epistatic quantitative trait Loci with one-dimensional genome searches. (2002) (41)
- A critical issue in model-based inference for studying trait-based community assembly and a solution (2017) (39)
- Mixed model approaches for the identification of QTLs within a maize hybrid breeding program (2009) (38)
- Genome-Wide Computational Function Prediction of Arabidopsis Proteins by Integration of Multiple Data Sources1[C][W][OA] (2010) (35)
- Bayesian model-based cluster analysis for predicting macrofaunal communities (2003) (34)
- Predicting sub-Golgi localization of type II membrane proteins (2008) (34)
- Agro-Ecological Indicators (AEIs) for Dairy and Mixed Farming Systems Classification: Identifying Alternatives for the Cuban Livestock Sector (2009) (32)
- A Unimodal Species Response Model Relating Traits to Environment with Application to Phytoplankton Communities (2014) (31)
- Combining exposure and effect modeling into an integrated probabilistic environmental risk assessment for nanoparticles (2016) (28)
- Approximating a similarity matrix by a latent class model: A reappraisal of additive fuzzy clustering (2009) (25)
- Image-based particle filtering for navigation in a semi-structured agricultural environment. (2014) (25)
- Response to comment by Keith Beven on “Equifinality of formal (DREAM) and informal (GLUE) Bayesian approaches in hydrologic modeling?” (2009) (25)
- Generalized linear mixed models can detect unimodal species-environment relationships (2013) (25)
- Spatial and temporal variations of Venus haze properties obtained from Pioneer Venus Orbiter polarimetry (2002) (24)
- Parameterized scattering matrices for small particles in planetary atmospheres (2001) (24)
- Bayesian sigmoid shrinkage with improper variance priors and an application to wavelet denoising (2006) (24)
- Trait-Environment Relationships and Tiered Forward Model Selection in Linear Mixed Models (2012) (23)
- Identity-by-Descent Matrix Decomposition Using Latent Ancestral Allele Models (2010) (21)
- Analysing chemical-induced changes in macroinvertebrate communities in aquatic mesocosm experiments: a comparison of methods (2015) (21)
- Predicting and understanding transcription factor interactions based on sequence level determinants of combinatorial control (2008) (20)
- Algorithms and biplots for double constrained correspondence analysis (2018) (20)
- Integrated probabilistic risk assessment for nanoparticles: the case of nanosilica in food (2015) (19)
- New robust weighted averaging‐ and model‐based methods for assessing trait–environment relationships (2018) (19)
- Prediction uncertainty assessment of a systems biology model requires a sample of the full probability distribution of its parameters (2014) (18)
- Galileo photopolarimetry of Jupiter at 678.5 nm (2002) (16)
- Genetic algorithms and Markov Chain Monte Carlo: Differential Evolution Markov Chain makes Bayesian computing easy (revised) (2004) (16)
- Fourth-corner correlation is a score test statistic in a log-linear trait–environment model that is useful in permutation testing (2017) (16)
- Bootstrap confidence intervals for principal response curves (2008) (13)
- Benthic invertebrate and microbial biodiversity in sub-tropical urban rivers: Correlations with environmental variables and emerging chemicals. (2019) (12)
- Correlated mutations via regularized multinomial regression (2011) (12)
- Gene Ontology consistent protein function prediction: the FALCON algorithm applied to six eukaryotic genomes (2013) (12)
- Genetic algorithms and Markov Chain Monte Carlo: Differential Evolution Markov Chain makes Bayesian computing easy (2004) (11)
- Integrating spatial and phylogenetic information in the fourth-corner analysis to test trait-environment relationships. (2018) (11)
- Response to “traits and stress: keys to identify community effects of low levels of toxicants in test systems” by Liess and Beketov (2011) (2012) (11)
- Comments on the PLS kernel algorithm (10)
- Image-Based Particle Filtering For Robot Navigation In A Maize Field (2012) (10)
- Response to “traits and stress: keys to identify community effects of low levels of toxicants in test systems” by Liess and Beketov (2011) (2011) (9)
- Biomarker Research in ADHD: the Impact of Nutrition (BRAIN) - study protocol of an open-label trial to investigate the mechanisms underlying the effects of a few-foods diet on ADHD symptoms in children (2019) (9)
- Functional biogeography of Neotropical moist forests: Trait–climate relationships and assembly patterns of tree communities (2021) (9)
- Biodiversity analyses for risk assessment of genetically modified potato (2017) (8)
- An improved statistical approach for reconstructing past climates from biotic assemblages (2020) (8)
- Double constrained ordination for assessing biological trait responses to multiple stressors: A case study with benthic macroinvertebrate communities. (2021) (7)
- Selection properties of type II maximum likelihood (empirical Bayes) in linear models with individual variance components for predictors (2012) (7)
- Log‐ratio analysis of microbiome data with many zeroes is library size dependent (2020) (6)
- CANOCO—an extension of DECORANA to analyze species-environment relationships (1988) (4)
- The objective function of partial least squares regression (4)
- Comparing sampling patterns for kriging the spatial mean temporal trend (2008) (4)
- The Use of Multiple Hierarchically Independent Gene Ontology Terms in Gene Function Prediction and Genome Annotation (2007) (4)
- Response variable selection in principal response curves using permutation testing (2017) (4)
- Investigating microbial associations from sequencing survey data with co‐correspondence analysis (2019) (3)
- Antimicrobial resistance clusters in commensal Escherichia coli from livestock (2021) (3)
- Predictor versus response permutation for significance testing in weighted regression and redundancy analysis (2021) (3)
- Temporal and Spatial Variations of Venus Cloud Properties. (1997) (2)
- Parametric estimation of P(X > Y) for normal distributions in the context of probabilistic environmental risk assessment (2015) (2)
- The Vertical Temperature Distribution in the Atmosphere (1914) (2)
- A Flexible Bayesian framework for multiple QTL mapping in pedigreed populations (2004) (2)
- A risk assessment-driven quantitative comparison of gene expression profiles in PBMCs and white adipose tissue of humans and rats after isoflavone supplementation. (2016) (2)
- Fourth-corner correlation is a score test statistic in a log-linear trait–environment model that is useful in permutation testing (2017) (1)
- Corrigendum to “An automated system for the recognition of various specific rat behaviors” [J. Neurosci. Methods 218(2) (2013) 214–224] (2014) (1)
- Relating ultrasonic vocalizations from a pair of rats to individual behavior: A composite link model approach (2018) (1)
- Parameterized scattering matrices for nonsperical particles in planetary atmospheres (2000) (1)
- Regression by L1 regularization of smart contrasts and sums (ROSCAS) beats PLS and elastic net in latent variable model (2009) (1)
- Response variable selection in principal response curves using permutation testing (2016) (0)
- Galileo PPR observations of Jupiter's atmsophere (2001) (0)
- Meteorological measurements in the upper air at station Jakarta, 1909-11-26 to 1910-09-19, ERA-CLIM ID 5487 (2014) (0)
- Topics in constrained and unconstrained ordination (2014) (0)
- Stats for nano (2011) (0)
- Nano risk assessment: a statistical approach (2012) (0)
- Algorithms and biplots for double constrained correspondence analysis (2018) (0)
- The brightness and polarization of Venus in the ultraviolet. (1996) (0)
- Bayesian monitoring framework (2009) (0)
- Barometric Oscillation. (0)
- Machine learning methods for the automated behavioral phenotyping of animal models for Parkinson's and Huntington's disease. (2009) (0)
- Book reviews (1991) (0)
- Gene Ontology consistent protein function prediction: the FALCON algorithm applied to six eukaryotic genomes (2013) (0)
- A Remarkable Dry Fog in the East Indian Archipelago (1915) (0)
- QTL linkage analysis of connected populations using ancestral marker and pedigree information (2012) (0)
- Meteorological measurements in the upper air at station Jakarta, 1912-02-16 to 1914-03-05, ERA-CLIM ID 5489 (2014) (0)
- Galileo Photopolarimetry of Jupiter: First Results and Preliminary Interpretation (1999) (0)
- Bayesian analysis of models to relate species occurrence, species traits, landscape and environment. (2007) (0)
- Integrated protein function prediction in Arabidopsis thaliana by Bayesian Markov random fields (2011) (0)
- Out of the Box Statistical Methods for the Analysis of Automated Home Cage Experiments (2012) (0)
- WEATHER CONDITIONS AT SUMATRA. (1925) (0)
- LONG-RANGE FORECASTING IN JAVA (1920) (0)
- Generalized Additive Models (GAMs) via Bayesian P-splines using INLA (2015) (0)
- Prediction of gene function and regulation (2007) (0)
- The correlation between atmospheric pressure and rainfall in the East-Indian Archipelago in connection with the 3,5 yearly barometric period (0)
- Environmental control and spatial structure 53 (2004) (0)
- Testing environmental effects on taxonomic composition with canonical correspondence analysis: alternative permutation tests are not equal (2022) (0)
- Stats for nano: risico-afwegingen (2011) (0)
- Statistical modelling of behaviour and behavioural responses to psycho-pharmaca of rodent strains and rodent models of psychiatric and neurological diseases (2012) (0)
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