Carlos D. Bustamante

Carlos D. Bustamante's AcademicInfluence.com Rankings

Biology

#3195

World Rank

#4923

Historical Rank

#1326

USA Rank

Genetics

#427

World Rank

#493

Historical Rank

#183

USA Rank

biology Degrees

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Biology

Carlos D. Bustamante's Degrees

Bachelors Biological Sciences Stanford University

Why Is Carlos D. Bustamante Influential?

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According to Wikipedia, Carlos D. Bustamante is an American population geneticist and a professor at Stanford University School of Medicine. Early life and education Bustamante is a native of Venezuela who immigrated to the United States at age seven. He attended Harvard University, from which he graduated with a bachelor's and later a doctorate in biology, along with a M.S. in statistics. After completing his Doctoral studies, Bustamante went on to study at Oxford University, focusing in Mathematical Genetics in 2001. From 2002 to 2009, Bustamante was a faculty member at Cornell University, publishing numerous works during this time.

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Carlos D. Bustamante's Published Works

Number of citations in a given year to any of this author's works

Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author

Published Works

A global reference for human genetic variation (2015) (11857)
An integrated map of genetic variation from 1,092 human genomes (2012) (7565)
Genetic effects on gene expression across human tissues (2017) (2841)
Evolution and Functional Impact of Rare Coding Variation from Deep Sequencing of Human Exomes (2012) (1604)
Inferring the Joint Demographic History of Multiple Populations from Multidimensional SNP Frequency Data (2009) (1445)
Genes mirror geography within Europe (2008) (1365)
Evolutionary and Biomedical Insights from the Rhesus Macaque Genome (2007) (1309)
Genome-wide association mapping reveals a rich genetic architecture of complex traits in Oryza sativa (2011) (1136)
REVEL: An Ensemble Method for Predicting the Pathogenicity of Rare Missense Variants. (2016) (1110)
A Scan for Positively Selected Genes in the Genomes of Humans and Chimpanzees (2005) (935)
Human Demographic History Impacts Genetic Risk Prediction across Diverse Populations. (2017) (923)
Genomic scans for selective sweeps using SNP data. (2005) (888)
ClinGen--the Clinical Genome Resource. (2015) (856)
Natural selection on protein-coding genes in the human genome (2005) (784)
Genome-Wide Survey of SNP Variation Uncovers the Genetic Structure of Cattle Breeds (2009) (778)
Great ape genetic diversity and population history (2013) (747)
A Mutation in the Myostatin Gene Increases Muscle Mass and Enhances Racing Performance in Heterozygote Dogs (2007) (738)
Genome-wide SNP and haplotype analyses reveal a rich history underlying dog domestication (2010) (684)
An Aboriginal Australian Genome Reveals Separate Human Dispersals into Asia (2011) (675)
A Single IGF1 Allele Is a Major Determinant of Small Size in Dogs (2007) (615)
Assessing the Evolutionary Impact of Amino Acid Mutations in the Human Genome (2008) (609)
Genomewide SNP variation reveals relationships among landraces and modern varieties of rice (2009) (604)
Demographic history and rare allele sharing among human populations (2011) (592)
Genetic structure and domestication history of the grape (2011) (589)
RFMix: a discriminative modeling approach for rapid and robust local-ancestry inference. (2013) (557)
Comparative and demographic analysis of orang-utan genomes (2011) (545)
Patterns of Positive Selection in Six Mammalian Genomes (2008) (538)
Genetic analyses of diverse populations improves discovery for complex traits (2019) (501)
Recent and ongoing selection in the human genome (2007) (487)
Ascertainment bias in studies of human genome-wide polymorphism. (2005) (485)
Genome Sequencing Highlights the Dynamic Early History of Dogs (2014) (482)
Genomics for the world (2011) (479)
Localizing Recent Adaptive Evolution in the Human Genome (2007) (477)
The genome of a Late Pleistocene human from a Clovis burial site in western Montana (2014) (464)
A Markov Chain Monte Carlo Approach for Joint Inference of Population Structure and Inbreeding Rates From Multilocus Genotype Data (2007) (456)
Mapping the human genetic architecture of COVID-19 (2021) (455)
Genomic evidence for the Pleistocene and recent population history of Native Americans (2015) (428)
Genome-wide patterns of population structure and admixture in West Africans and African Americans (2009) (426)
Genome-Wide Patterns of Nucleotide Polymorphism in Domesticated Rice (2007) (425)
The genetics of Mexico recapitulates Native American substructure and affects biomedical traits (2014) (413)
Molecular evidence for a single evolutionary origin of domesticated rice (2011) (405)
A Simple Genetic Architecture Underlies Morphological Variation in Dogs (2010) (403)
New insights into the Tyrolean Iceman's origin and phenotype as inferred by whole-genome sequencing (2012) (398)
Hunter-gatherer genomic diversity suggests a southern African origin for modern humans (2011) (393)
Molecular and Evolutionary History of Melanism in North American Gray Wolves (2009) (388)
Proportionally more deleterious genetic variation in European than in African populations (2008) (386)
Genetic Architecture of Aluminum Tolerance in Rice (Oryza sativa) Determined through Genome-Wide Association Analysis and QTL Mapping (2011) (359)
Simultaneous inference of selection and population growth from patterns of variation in the human genome (2005) (333)
Genome-wide patterns of population structure and admixture among Hispanic/Latino populations (2010) (329)
An Expressed Fgf4 Retrogene Is Associated with Breed-Defining Chondrodysplasia in Domestic Dogs (2009) (320)
Evolutionary History of GS3, a Gene Conferring Grain Length in Rice (2009) (308)
Coat Variation in the Domestic Dog Is Governed by Variants in Three Genes (2009) (304)
The cost of inbreeding in Arabidopsis (2002) (299)
A genome-wide perspective on the evolutionary history of enigmatic wolf-like canids. (2011) (298)
The genetic prehistory of the New World Arctic (2014) (285)
Genetic Control of Chromatin States in Humans Involves Local and Distal Chromosomal Interactions (2015) (282)
Genomic Ancestry of North Africans Supports Back-to-Africa Migrations (2012) (279)
Reconstructing the Population Genetic History of the Caribbean (2013) (279)
The genetic prehistory of southern Africa (2012) (276)
The Population Reference Sample, POPRES: a resource for population, disease, and pharmacological genetics research. (2008) (271)
Pulling out the 1%: whole-genome capture for the targeted enrichment of ancient DNA sequencing libraries. (2013) (265)
Punctuated bursts in human male demography inferred from 1,244 worldwide Y-chromosome sequences (2016) (263)
Targets of balancing selection in the human genome. (2009) (261)
Genomic Diversity and Introgression in O. sativa Reveal the Impact of Domestication and Breeding on the Rice Genome (2010) (259)
Global Dissemination of a Single Mutation Conferring White Pericarp in Rice (2007) (245)
Direct measure of the de novo mutation rate in autism and schizophrenia cohorts. (2010) (239)
Distinguishing Between Selective Sweeps and Demography Using DNA Polymorphism Data (2005) (237)
Effect of predicted protein-truncating genetic variants on the human transcriptome (2015) (226)
The genome sequence of the most widely cultivated cacao type and its use to identify candidate genes regulating pod color (2013) (223)
Development of a Panel of Genome-Wide Ancestry Informative Markers to Study Admixture Throughout the Americas (2012) (222)
Sequencing Y Chromosomes Resolves Discrepancy in Time to Common Ancestor of Males Versus Females (2013) (221)
Natural Selection on Genes that Underlie Human Disease Susceptibility (2008) (221)
Balancing Selection Maintains a Form of ERAP2 that Undergoes Nonsense-Mediated Decay and Affects Antigen Presentation (2010) (220)
The ancestry and affiliations of Kennewick Man (2015) (220)
Spectrum and prevalence of genetic predisposition in medulloblastoma: a retrospective genetic study and prospective validation in a clinical trial cohort (2018) (212)
Estimating the mutation load in human genomes (2015) (211)
The functional spectrum of low-frequency coding variation (2011) (210)
Distance from sub-Saharan Africa predicts mutational load in diverse human genomes (2015) (208)
Development of genome-wide SNP assays for rice (2010) (205)
Development of genome-wide SNP assays for rice (2010) (205)
Directional selection and the site-frequency spectrum. (2001) (193)
Genomic Insights into the Ancestry and Demographic History of South America (2015) (179)
Gene flow from North Africa contributes to differential human genetic diversity in southern Europe (2013) (179)
Genetic Recombination Is Targeted towards Gene Promoter Regions in Dogs (2013) (177)
High-throughput two-dimensional root system phenotyping platform facilitates genetic analysis of root growth and development. (2012) (176)
Demographic Histories and Patterns of Linkage Disequilibrium in Chinese and Indian Rhesus Macaques (2007) (175)
Privacy Risks from Genomic Data-Sharing Beacons (2015) (173)
Global distribution of genomic diversity underscores rich complex history of continental human populations. (2009) (171)
Evolutionary and population genomics of the cavity causing bacteria Streptococcus mutans. (2013) (171)
Comprehensive transcriptome analysis using synthetic long-read sequencing reveals molecular co-association of distant splicing events (2015) (170)
Dispersals and genetic adaptation of Bantu-speaking populations in Africa and North America (2017) (168)
Reconstructing Native American Migrations from Whole-Genome and Whole-Exome Data (2013) (167)
The African Turquoise Killifish Genome Provides Insights into Evolution and Genetic Architecture of Lifespan (2015) (166)
PCAdmix: Principal Components-Based Assignment of Ancestry Along Each Chromosome in Individuals with Admixed Ancestry from Two or More Populations (2012) (163)
Genetic structure in village dogs reveals a Central Asian domestication origin (2015) (162)
Complex population structure in African village dogs and its implications for inferring dog domestication history (2009) (160)
Natural selection on the olfactory receptor gene family in humans and chimpanzees. (2003) (157)
High-throughput single nucleotide polymorphism genotyping for breeding applications in rice using the BeadXpress platform (2012) (157)
Darwinian and demographic forces affecting human protein coding genes. (2009) (156)
Variation of BMP3 Contributes to Dog Breed Skull Diversity (2012) (150)
Phased Whole-Genome Genetic Risk in a Family Quartet Using a Major Allele Reference Sequence (2011) (149)
Context dependence, ancestral misidentification, and spurious signatures of natural selection. (2007) (147)
The Great Migration and African-American Genomic Diversity (2015) (145)
Linkage Disequilibrium and Demographic History of Wild and Domestic Canids (2009) (143)
Bayesian Analysis Suggests that Most Amino Acid Replacements in Drosophila Are Driven by Positive Selection (2003) (140)
The phylogenetic and geographic structure of Y-chromosome haplogroup R1a (2014) (132)
Evolutionary Processes Acting on Candidate cis-Regulatory Regions in Humans Inferred from Patterns of Polymorphism and Divergence (2009) (126)
Compact genome of the Antarctic midge is likely an adaptation to an extreme environment (2014) (123)
A continuum of admixture in the Western Hemisphere revealed by the African Diaspora genome (2016) (120)
Fast and Cost-Effective Genetic Mapping in Apple Using Next-Generation Sequencing (2014) (120)
Detecting and annotating genetic variations using the HugeSeq pipeline (2012) (120)
An Unexpectedly Complex Architecture for Skin Pigmentation in Africans (2017) (118)
Type 2 Diabetes Risk Alleles Demonstrate Extreme Directional Differentiation among Human Populations, Compared to Other Diseases (2012) (117)
Melanesian Blond Hair Is Caused by an Amino Acid Change in TYRP1 (2012) (116)
Genome-wide association study and admixture mapping identify different asthma-associated loci in Latinos: the Genes-environments & Admixture in Latino Americans study. (2014) (108)
Gut microbiome transition across a lifestyle gradient in Himalaya (2018) (106)
Selective sweep mapping of genes with large phenotypic effects. (2005) (106)
Darwinian Selection on a Selfing Locus (2004) (103)
Ancient genomes from North Africa evidence prehistoric migrations to the Maghreb from both the Levant and Europe (2018) (102)
Genome-wide ancestry of 17th-century enslaved Africans from the Caribbean (2015) (100)
A genome-wide association study of bronchodilator response in Latinos implicates rare variants. (2014) (100)
Genetic ancestry influences asthma susceptibility and lung function among Latinos. (2015) (100)
Solvent accessibility and purifying selection within proteins of Escherichia coli and Salmonella enterica. (2000) (99)
The Baker's Yeast Diploid Genome Is Remarkably Stable in Vegetative Growth and Meiosis (2010) (97)
Population genetic inference from personal genome data: impact of ancestry and admixture on human genomic variation. (2012) (96)
Network enhancement as a general method to denoise weighted biological networks (2018) (96)
Dynamic incorporation of multiple in silico functional annotations empowers rare variant association analysis of large whole genome sequencing studies at scale (2020) (93)
On the Utility of Linkage Disequilibrium as a Statistic for Identifying Targets of Positive Selection in Nonequilibrium Populations (2007) (92)
Multidimensional structure-function relationships in human β-cardiac myosin from population-scale genetic variation (2016) (88)
Population Genomic Analysis of Ancient and Modern Genomes Yields New Insights into the Genetic Ancestry of the Tyrolean Iceman and the Genetic Structure of Europe (2014) (88)
A Population Genetic Approach to Mapping Neurological Disorder Genes Using Deep Resequencing (2011) (88)
The Time-Scale of Recombination Rate Evolution in Great Apes (2015) (87)
Development of a Research Platform for Dissecting Phenotype–Genotype Associations in Rice (Oryza spp.) (2010) (85)
Medical relevance of protein-truncating variants across 337,205 individuals in the UK Biobank study (2017) (84)
Mapping and characterization of structural variation in 17,795 human genomes (2020) (84)
Analysis of the Genetic Basis of Disease in the Context of Worldwide Human Relationships and Migration (2013) (83)
Polygenic risk scores: a biased prediction? (2018) (82)
Demographically-Based Evaluation of Genomic Regions under Selection in Domestic Dogs (2016) (82)
North African Populations Carry the Signature of Admixture with Neandertals (2012) (81)
SnIPRE: Selection Inference Using a Poisson Random Effects Model (2012) (81)
The Divergence of Neandertal and Modern Human Y Chromosomes (2016) (81)
The Clinical Imperative for Inclusivity: Race, Ethnicity, and Ancestry (REA) in Genomics (2018) (78)
Genetic Mapping and Biochemical Basis of Yellow Feather Pigmentation in Budgerigars (2017) (77)
Selection on rapidly evolving proteins in the Arabidopsis genome. (2003) (76)
SNP identification, verification, and utility for population genetics in a non-model genus (2010) (74)
Population genetic analysis of the DARC locus (Duffy) reveals adaptation from standing variation associated with malaria resistance in humans (2016) (73)
Limited Evidence for Classic Selective Sweeps in African Populations (2012) (70)
An Efficient Multiple-Testing Adjustment for eQTL Studies that Accounts for Linkage Disequilibrium between Variants. (2016) (69)
A maximum likelihood method for analyzing pseudogene evolution: implications for silent site evolution in humans and rodents. (2002) (68)
An MCMC Approach for Joint Inference of Population Structure and Inbreeding Rates from Multi-Locus Genotype Data (2007) (67)
Addressing Beacon re-identification attacks: quantification and mitigation of privacy risks (2017) (65)
Detecting coevolving amino acid sites using Bayesian mutational mapping (2005) (63)
Challenges and disparities in the application of personalized genomic medicine to populations with African ancestry (2016) (62)
Population Genetics of Polymorphism and Divergence Under Fluctuating Selection (2008) (62)
Copy Number Variation of CCL3-like Genes Affects Rate of Progression to Simian-AIDS in Rhesus Macaques (Macaca mulatta) (2009) (62)
A Composite-Likelihood Approach for Detecting Directional Selection From DNA Sequence Data (2005) (61)
Assessing the contribution of rare variants to complex trait heritability from whole-genome sequence data (2022) (60)
Methods for Human Demographic Inference Using Haplotype Patterns From Genomewide Single-Nucleotide Polymorphism Data (2009) (60)
Standardized biogeographic grouping system for annotating populations in pharmacogenetic research (2018) (59)
Patterns of genomic and phenomic diversity in wine and table grapes (2017) (58)
Origins and genetic legacies of the Caribbean Taino (2018) (57)
Successful Computational Prediction of Novel Imprinted Genes from Epigenomic Features (2010) (56)
Genetic variant in folate homeostasis is associated with lower warfarin dose in African Americans. (2014) (56)
An ADAM9 mutation in canine cone-rod dystrophy 3 establishes homology with human cone-rod dystrophy 9 (2010) (55)
Strategies for Enriching Variant Coverage in Candidate Disease Loci on a Multiethnic Genotyping Array (2016) (55)
Mechanisms Underlying Adaptation to Life in Hydrogen Sulfide–Rich Environments (2016) (55)
Association study in African-admixed populations across the Americas recapitulates asthma risk loci in non-African populations (2019) (55)
Exploring Population Genetic Models With Recombination Using Efficient Forward-Time Simulations (2008) (55)
Population genomic analyses of the chocolate tree, Theobroma cacao L., provide insights into its domestication process (2018) (54)
On Identifying the Optimal Number of Population Clusters via the Deviance Information Criterion (2011) (54)
ALCHEMY: a reliable method for automated SNP genotype calling for small batch sizes and highly homozygous populations (2010) (53)
Context-dependent mutation rates may cause spurious signatures of a fixation bias favoring higher GC-content in humans. (2007) (52)
Achieving high-sensitivity for clinical applications using augmented exome sequencing (2015) (52)
Genome-wide association study and admixture mapping reveal new loci associated with total IgE levels in Latinos. (2015) (52)
Population Genetics of Polymorphism and Divergence for Diploid Selection Models With Arbitrary Dominance (2004) (52)
Inference of Gorilla Demographic and Selective History from Whole-Genome Sequence Data (2015) (51)
Inferring genome-wide patterns of admixture in Qataris using fifty-five ancestral populations (2012) (51)
A statistical characterization of consistent patterns of human immunodeficiency virus evolution within infected patients. (2005) (49)
Evaluating signatures of sex-specific processes in the human genome (2009) (49)
Maximum likelihood and Bayesian methods for estimating the distribution of selective effects among classes of mutations using DNA polymorphism data. (2003) (49)
North African Jewish and non-Jewish populations form distinctive, orthogonal clusters (2012) (45)
A research roadmap for next-generation sequencing informatics (2016) (45)
Native American gene flow into Polynesia predating Easter Island settlement (2020) (44)
Xrare: a machine learning method jointly modeling phenotypes and genetic evidence for rare disease diagnosis (2019) (44)
Diffusion Approximations for Demographic Inference: DaDi (2010) (43)
The Genome of the Self-Fertilizing Mangrove Rivulus Fish, Kryptolebias marmoratus: A Model for Studying Phenotypic Plasticity and Adaptations to Extreme Environments (2016) (43)
Transcriptome Sequencing from Diverse Human Populations Reveals Differentiated Regulatory Architecture (2014) (43)
Chromosomal effects of rapid gene evolution in Drosophila melanogaster. (2001) (42)
Clinical Genetics Lacks Standard Definitions and Protocols for the Collection and Use of Diversity Measures (2020) (41)
Genomic insights into the origin and diversification of late maritime hunter-gatherers from the Chilean Patagonia (2018) (41)
Mitogenomes illuminate the origin and migration patterns of the indigenous people of the Canary Islands (2018) (41)
IQCB1 and PDE6B mutations cause similar early onset retinal degenerations in two closely related terrier dog breeds. (2013) (38)
Fine-scale population structure and the era of next-generation sequencing. (2010) (37)
Phylogenetic applications of whole Y-chromosome sequences and the Near Eastern origin of Ashkenazi Levites (2013) (35)
Genomic Evidence for Local Adaptation of Hunter-Gatherers to the African Rainforest (2019) (34)
Exome capture from saliva produces high quality genomic and metagenomic data (2014) (34)
Randomized Trial of Personal Genomics for Preventive Cardiology: Design and Challenges (2012) (34)
Toward Genetics-Driven Early Intervention in Dilated Cardiomyopathy: Design and Implementation of the DCM Precision Medicine Study (2017) (34)
Discovery and functional characterization of a neomorphic PTEN mutation (2015) (34)
Mutation hot spots in yeast caused by long-range clustering of homopolymeric sequences. (2012) (34)
Human Genome Variation 2006: emerging views on structural variation and large-scale SNP analysis (2007) (33)
Reply to Ge and Sang: A single origin of domesticated rice (2011) (33)
Germline determinants of the somatic mutation landscape in 2,642 cancer genomes (2017) (33)
Population structure in Argentina (2018) (32)
Structure of cytoplasmic ring of nuclear pore complex by integrative cryo-EM and AlphaFold (2022) (31)
Identifying tagging SNPs for African specific genetic variation from the African Diaspora Genome (2017) (31)
Population History and Gene Divergence in Native Mexicans Inferred from 76 Human Exomes (2019) (31)
The PAGE Study: How Genetic Diversity Improves Our Understanding of the Architecture of Complex Traits (2018) (30)
Detecting Directional Selection in the Presence of Recent Admixture in African-Americans (2011) (30)
Efficient analysis of large datasets and sex bias with ADMIXTURE (2016) (29)
Factors associated with degree of atopy in Latino children in a nationwide pediatric sample: the Genes-environments and Admixture in Latino Asthmatics (GALA II) study. (2013) (29)
Genes mirror geography within Europe (2008) (29)
A genome-wide association study identifies only two ancestry specific variants associated with spontaneous preterm birth (2018) (29)
An admixture mapping meta‐analysis implicates genetic variation at 18q21 with asthma susceptibility in Latinos (2019) (28)
Comparative performance of two whole‐genome capture methodologies on ancient DNA Illumina libraries (2015) (28)
The Effect of Recent Admixture on Inference of Ancient Human Population History (2010) (28)
GBStools: A Statistical Method for Estimating Allelic Dropout in Reduced Representation Sequencing Data (2016) (27)
Population Genomic Analysis Reveals a Rich Speciation and Demographic History of Orang-utans (Pongo pygmaeus and Pongo abelii) (2013) (27)
Diversity in immunogenomics: the value and the challenge (2020) (26)
Genetic Diversity Turns a New PAGE in Our Understanding of Complex Traits (2017) (26)
Detection of Heterozygous Mutations in the Genome of Mismatch Repair Defective Diploid Yeast Using a Bayesian Approach (2010) (24)
Imputation-Aware Tag SNP Selection To Improve Power for Large-Scale, Multi-ethnic Association Studies (2018) (24)
Population Genetics of Molecular Evolution (2005) (23)
FIRE: functional inference of genetic variants that regulate gene expression (2017) (23)
A genome-wide linkage scan in German shepherd dogs localizes canine platelet procoagulant deficiency (Scott syndrome) to canine chromosome 27. (2010) (21)
Inherited causes of clonal haematopoiesis in 97,691 whole genomes (2020) (21)
Paths and timings of the peopling of Polynesia inferred from genomic networks (2021) (19)
In-solution Y-chromosome capture-enrichment on ancient DNA libraries (2017) (19)
Gene expression imputation identifies candidate genes and susceptibility loci associated with cutaneous squamous cell carcinoma (2018) (18)
Copy Number Variation of CCL 3-like Genes Affects Rate of Progression to Simian-AIDS in Rhesus Macaques ( Macaca mulatta ) (2009) (18)
Genome sequencing unveils a regulatory landscape of platelet reactivity (2019) (18)
Comparative Performance of Two Whole Genome Capture Methodologies on Ancient DNA Illumina Libraries (2014) (18)
ClinGen Variant Curation Interface: a variant classification platform for the application of evidence criteria from ACMG/AMP guidelines (2021) (18)
Vaccine breakthrough hypoxemic COVID-19 pneumonia in patients with auto-Abs neutralizing type I IFNs (2022) (18)
Genetic variation drives seasonal onset of hibernation in the 13-lined ground squirrel (2019) (17)
FasTag: Automatic text classification of unstructured medical narratives (2019) (17)
Meta-analysis fine-mapping is often miscalibrated at single-variant resolution (2022) (17)
Ancient DNA reconstructs the genetic legacies of pre-contact Puerto Rico communities. (2019) (17)
Whole-genome sequencing of Atacama skeleton shows novel mutations linked with dysplasia (2018) (15)
GENOME-WIDE ASSOCIATION MAPPING AND RARE ALLELES: FROM POPULATION GENOMICS TO PERSONALIZED MEDICINE - Session Introduction. (2011) (15)
Single nucleotide polymorphisms for DNA typing in the domestic horse (2017) (15)
Inexpensive and Highly Reproducible Cloud-Based Variant Calling of 2,535 Human Genomes (2015) (15)
Ancient DNA reconstructs the genetic legacies of pre-contact Puerto Rico communities (2019) (15)
Whole-genome sequencing reveals the extent of heterozygosity in a preferentially self-fertilizing hermaphroditic vertebrate. (2018) (15)
Rapid evolution of a skin-lightening allele in southern African KhoeSan (2018) (15)
Complexities of gene expression patterns in natural populations of an extremophile fish (Poecilia mexicana, Poeciliidae) (2017) (15)
The possibility of de novo assembly of the genome and population genomics of the mangrove rivulus, Kryptolebias marmoratus. (2012) (14)
GENOME-WIDE ASSOCIATION MAPPING AND RARE ALLELES: FROM POPULATION GENOMICS TO PERSONALIZED MEDICINE (2011) (14)
DeepTag: inferring diagnoses from veterinary clinical notes (2018) (14)
Improving the Fitness of High-Dimensional Biomechanical Models via Data-Driven Stochastic Exploration (2009) (13)
Consortium, G.P A map of human genome variation from population-scale sequencing. Nature 467, 1061-1073 (2010) (13)
PATH-SCAN: A Reporting Tool for Identifying Clinically Actionable Variants (2013) (13)
High-throughput SARS-CoV-2 and host genome sequencing from single nasopharyngeal swabs (2020) (12)
Lai-Net: Local-Ancestry Inference with Neural Networks (2020) (12)
Inferring SNP function using evolutionary, structural, and computational methods. (2005) (12)
Class-Conditional VAE-GAN for Local-Ancestry Simulation (2019) (12)
A novel splice mutation within equine KIT and the W15 allele in the homozygous state lead to all white coat color phenotypes. (2017) (11)
Erratum: Human Demographic History Impacts Genetic Risk Prediction across Diverse Populations (The American Journal of Human Genetics (2020) 107(4) (583–588), (S000292972030286X), (10.1016/j.ajhg.2020.08.017)) (2020) (10)
A genetic counseling needs assessment of Mexico (2019) (10)
Development of a small panel of SNPs to infer ancestry in Chileans that distinguishes Aymara and Mapuche components (2020) (10)
Exclusion of ABCA‐1 as a candidate gene for canine Scott syndrome (2008) (9)
Selective Sweep in the Evolution of a New Sperm-Specific Gene in Drosophila (2005) (9)
Imputation-based Assessment of Next Generation Rare Exome Variant Arrays (2013) (9)
polymorphism Ascertainment bias in studies of human genome-wide data (2005) (9)
Population‐specific single‐nucleotide polymorphism confers increased risk of venous thromboembolism in African Americans (2016) (9)
Genome Sequencing Highlights Genes Under Selection and the Dynamic Early History of Dogs (2013) (8)
LitGen: Genetic Literature Recommendation Guided by Human Explanations (2019) (8)
Genetic variation drives seasonal onset of hibernation in the 13-lined ground squirrel (2019) (8)
Levels and Patterns of Nucleotide Variation in Domestication QTL Regions on Rice Chromosome 3 Suggest Lineage-Specific Selection (2011) (7)
Structural Variation Detection by Proximity Ligation from Formalin-Fixed, Paraffin-Embedded Tumor Tissue. (2019) (7)
Neolithization of North Africa involved the migration of people from both the Levant and Europe (2017) (7)
Genes Coat Variation in the Domestic Dog Is Governed by Variants in Three (2011) (7)
Human origins: Shadows of early migrations (2010) (7)
Pacific symposium on biocomputing 2011 (2011) (7)
Allele Is a Major Determinant of Small Size in Dogs IGF 1 A Single (2011) (7)
Human demographic history impacts genetic risk prediction across diverse populations (2016) (7)
North American Gray Wolves Molecular and Evolutionary History of Melanism (2009) (7)
Corrections And Clarifications (2008) (7)
Bayesian model comparison for rare variant association studies of multiple phenotypes (2018) (6)
Neural ADMIXTURE: rapid population clustering with autoencoders (2021) (6)
Next-Generation Sequencing of the Complete Mitochondrial Genome of the Endangered Species Black Lion Tamarin Leontopithecus chrysopygus (Primates) and Mitogenomic Phylogeny Focusing on the Callitrichidae Family (2018) (6)
Archetypal Analysis for population genetics (2021) (6)
Genetic architecture drives seasonal onset of hibernation in the 13-lined ground squirrel (2017) (6)
The Next Generation Precision Medical Record - A Framework for Integrating Genomes and Wearable Sensors with Medical Records (2016) (6)
Reply to Hublin and Klein: Locating a geographic point of dispersion in Africa for contemporary humans (2011) (6)
Development and clinical validation of a targeted RNAseq panel (Fusion-STAMP) for diagnostic and predictive gene fusion detection in solid tumors (2019) (5)
SNAPPY: Single Nucleotide Assignment of Phylogenetic Parameters on the Y chromosome (2018) (5)
Network enhancement as a general method to denoise weighted biological networks (2018) (5)
Supplementary Information for: The genetic prehistory of southern Africa (2012) (5)
Powerful, scalable and resource-efficient meta-analysis of rare variant associations in large whole genome sequencing studies (2022) (4)
High Resolution Ancestry Deconvolution for Next Generation Genomic Data (2021) (4)
Bayesian Linkage Analysis of Categorical Traits for Arbitrary Pedigree Designs (2010) (4)
Population genetic history and polygenic risk biases in 1000 Genomes populations (2016) (4)
A Tale of Two Haplotypes: The EDA2R/AR Intergenic Region is the Most Divergent Genomic Segment between Africans and East Asians in the Human Genome (2012) (4)
Ascertainment bias in studies of human genome-wide Material Supplemental (2005) (3)
Imputation aware tag SNP selection to improve power for multi-ethnic association studies (2017) (3)
Author Correction: Association study in African-admixed populations across the Americas recapitulates asthma risk loci in non-African populations (2019) (3)
Dynamic RNA Regulation in the Brain Underlies Physiological Plasticity in a Hibernating Mammal (2021) (3)
Rare predicted loss-of-function variants of type I IFN immunity genes are associated with life-threatening COVID-19 (2023) (3)
Data mining of digitized health records in a resource-constrained setting reveals that timely immunophenotyping is associated with improved breast cancer outcomes (2018) (3)
Genetics and Genomics of Human Population Structure (2010) (3)
XGMix: Local-Ancestry Inference with Stacked XGBoost (2020) (3)
Clotting factor genes are associated with preeclampsia in high altitude pregnant women in the Peruvian Andes (2021) (3)
Whole Genome Association Study of the Plasma Metabolome Identifies Metabolites Linked to Cardiometabolic Disease in Black Individuals (2022) (3)
Reply to Wang et al.: Sequencing datasets do not refute Central Asian domestication origin of dogs (2016) (2)
Ancient DNA reveals five streams of migration into Micronesia and matrilocality in early Pacific seafarers (2022) (2)
GBStools: A Unified Approach for Reduced Representation Sequencing and Genotyping (2015) (2)
Response—How the Gray Wolf Got Its Color (2009) (2)
Bayesian model comparison for rare-variant association studies. (2021) (2)
DeepTag: inferring all-cause diagnoses from clinical notes in under-resourced medical domain (2018) (2)
Genomic insights into the domestication of the chocolate tree, Theobroma cacao L (2017) (2)
Genetic impact of slavery abolition in Mauritius: Ancient DNA data from Le Morne and Bois Marchand cemeteries (2015) (2)
Xrare: a machine learning method jointly modeling phenotypes and genetic evidence for rare disease diagnosis (2019) (2)
The genome sequence of the most widely cultivated cacao type and its use to identify candidate genes regulating pod color (2013) (2)
The Glean Machine (2002) (2)
Inferring genome-wide patterns of admixture in Qataris using fifty-five ancestral populations (2012) (2)
Identification of a Novel Somatic Mutation Leading to Allele Dropout for EGFR L858R Genotyping in Non-Small Cell Lung Cancer (2017) (2)
Hyperbolic geometry-based deep learning methods to produce population trees from genotype data (2022) (1)
Insight into the population history of the Chilean Patagonia through the analysis of ancient and modern genomic data (2016) (1)
Caring without sharing: Meta-analysis 2.0 for massive genome-wide association studies (2018) (1)
Beyond the reference genome (2015) (1)
Patterns of positive selection on the mammalian tree Supplementary Material (2008) (1)
Improved haplotyping of rare variants using next-generation sequence data (2012) (1)
Ancient mitogenomes of Argentine Patagonia (6070-310 YBP) reveal the early contribution of lineages not previously found in South America (2017) (1)
Article/Discovery Inference of Gorilla demographic and selective history from whole genome sequence data (2014) (1)
Multi-dimensional structure function relationships in human β-cardiac myosin from population scale genetic variation (2016) (1)
Medal: a patient similarity metric using medication prescribing patterns (2019) (1)
The Genome 10K Project: A Way Forward Further (2015) (1)
Inference of Gorilla demographic and selective history from whole genome sequence data (2014) (1)
Using genotype array data to compare multi- and single-sample variant calls and improve variant call sets from deep coverage whole-genome sequencing data. (2016) (1)
Genetic signatures of natural selection (2004) (1)
Increasing the Efficiency of Genome-wide Association Mapping via Hidden Markov Models (2016) (1)
A Complex, Polygenic Architecture for Lightened Skin Pigmentation in the Southern African KhoeSan (2017) (1)
Author Correction: Comparative and demographic analysis of orang-utan genomes (2022) (1)
Deconvoluting complex correlates of COVID-19 severity with a multi-omic pandemic tracking strategy (2022) (1)
Methods for human demographic inference using haplotype patterns from genome-wide SNP data (2009) (1)
Fast, exact linkage analysis for categorical traits on arbitrary pedigree designs (2011) (1)
Exome capture from saliva produces high quality genomic and metagenomic data (2014) (1)
Validating and automating learning of cardiometabolic polygenic risk scores from direct-to-consumer genetic and phenotypic data: implications for scaling precision health research (2022) (1)
Title: Genomic insights into the domestication of the chocolate tree, Theobroma cacao L. (2017) (0)
The genetic prehistory of southern Africa The Harvard community has made this article openly available. Please share how this access benefits you. Your story matters (2012) (0)
Quantifying and Improving Clinical-grade Coverage and Accuracy using Augmented Exome Sequencing (2015) (0)
Structural variation detection by proximity ligation from FFPE tumor tissue (2018) (0)
Sample file for merged Illumina and Affymetrix array data (fam) (2015) (0)
Manual for InStruct (2007) (0)
Title : Genes mirror geography within Europe (0)
High Heritability and Ancestry Dominance are behind the Genetics of Short Stature in South African KhoeSan Populations (2017) (0)
SnapShot: Human Biomedical Genomics (2011) (0)
Supplemental Material Limited Evidence for Classic Selec ve Sweeps in African Popula ons (2012) (0)
Session Introduction: Inferring SNP Function Using Evolutionary, Structural and Computational Methods (2005) (0)
We present a parametric analysis of the data that is based on the Poisson random field ( PRF ) model (2007) (0)
Whole-genome sequencing reveals the extent of heterozygosity in a preferentially self-fertilizing hermaphroditic vertebrate 1 (2018) (0)
Evolutionary acting on candidate cis-regulatory regions in humans inferred from patterns of polymorphism and divergence. (2009) (0)
Developing Gene-Specific Meta-Predictor of Variant Pathogenicity (2017) (0)
Association study in African-admixed populations across the Americas recapitulates asthma risk loci in non-African populations (2019) (0)
Variant-specific inflation factors for assessing population stratification at the phenotypic variance level (2021) (0)
Addressing Ancestry Disparities in Genomic Medicine: A Geographic-aware Algorithm (2020) (0)
Response : Nonspecific DNA Bending and the Specificity of Protein-DNA Interactions (1995) (0)
Genomic identification of recent positive selection in populations from Andean highlands and south-central Chile (2016) (0)
Retraction (2008) (0)
Whole-Genome Association Study Identifies the Canine Cone-Rod Dystrophy 2 Locus (2010) (0)
Probing Biological Surfaces: STM and SFM in Biology . Othmar Marti And Matthias Amrein, Eds. Academic Press, San Diego, CA, 1993. xii, 331 pp., illus. $69.95 or £54. (1994) (0)
Retraction (2005) (0)
Revised SOM 06.24.2015 (2015) (0)
Insights into Pre-Human History from Next-Generation Sequencing of Ancient DNA Samples (2014) (0)
Sequencing of Human Exomes Evolution and Functional Impact of Rare Coding Variation from Deep (2013) (0)
In-solution Y-chromosome capture-enrichment on ancient DNA libraries (2018) (0)
Genome-wide association study of asthma in individuals of African ancestry reveals novel asthma susceptibility loci (2017) (0)
The third root of Mexico: Genetic structure of Mexicans of African descent (2016) (0)
Population genomic analyses of the chocolate tree, Theobroma cacao L., provide insights into its domestication process (2018) (0)
Development of a small panel of SNPs to infer ancestry in Chileans that distinguishes Aymara and Mapuche components (2020) (0)
Bacterial population genomics and the agent of human tooth decay at the dawn of agriculture (2014) (0)
Sample file for Canine HD semi custom array (fam) (2015) (0)
Therapeutic importance of timely immunophenotyping of breast cancer in a resource-constrained setting: a retrospective hospital-based cohort study (2017) (0)
Unappreciated Subcontinental Admixture in Europeans and European Americans: Implications for Genetic Epidemiology Studies (2022) (0)
Deep learning facilitates rapid cohort identification using human and veterinary clinical narratives (2018) (0)
Author Correction: Inherited causes of clonal haematopoiesis in 97,691 whole genomes (2021) (0)
Evolutionary genomics of the dog and dog-like carnivores (2009) (0)
Dynamic incorporation of multiple in silico functional annotations empowers rare variant association analysis of large whole-genome sequencing studies at scale (2020) (0)
A genome-wide association study identifies only two ancestry specific variants associated with spontaneous preterm birth (2018) (0)
Genotype file for merged Illumina and Affymetrix array data (bed) (2015) (0)
P4046 Development and evaluation of a set of 100 SNP markers for DNA typing in the domestic horse. (2016) (0)
Genetic analyses of diverse populations improves discovery for complex traits (2019) (0)
The Oryzasnp Project - Genome - Wide Snps Discovered in Diverse Rice (2008) (0)
Data mining of digitized health records in a resource-constrained setting reveals that timely immunophenotyping is associated with improved breast cancer outcomes (2018) (0)
Factors associated with degree of atopy in Latino children in a nationwide pediatric sample: The GALA II Study (2013) (0)
Ancestry-specific analyses of genome-wide data confirm the settlement sequence of Polynesia (2022) (0)
Identification of a Novel Somatic Mutation Leading to Allele Dropout for EGFR L858R Genotyping in Non-Small Cell Lung Cancer (2017) (0)
Cone- Rod Dystrophy 3 Whole- Genome Association Study Identifies a Locus on Canine Chromosome 16 (2010) (0)
history of continental human populations Global distribution of genomic diversity underscores rich complex Material Supplemental (2009) (0)
Validating and automating learning of cardiometabolic polygenic risk scores from direct-to-consumer genetic and phenotypic data: implications for scaling precision health research (2022) (0)
Native American gene flow into Polynesia predating Easter Island settlement (2020) (0)
Rare loss of function variants in candidate genes and risk of colorectal cancer (2018) (0)
selection in six Mammalian genomes. (2008) (0)
Development of a small panel of SNPs to infer ancestry in Chileans that distinguishes and Mapuche components. (2020) (0)
Promoting Intellectual Discovery : Patents Versus Markets " Wednesday , November 24 , 2010 1 : 20 to 2 : 50 pm (2009) (0)
Achieving high-sensitivity for clinical applications using augmented exome sequencing (2015) (0)
Mapping and characterization of structural variation in 17,795 human genomes (2020) (0)
Comparing multi- and single-sample variant calls to improve variant call sets from deep coverage whole-genome sequencing data (2016) (0)
Variants in Three Genes Coat Variation in the Domestic Dog Is Governed (2009) (0)
Identification for individuals included in merged Illumina and Affymetrix data (2015) (0)
Efficient analysis of large datasets and sex bias with ADMIXTURE (2016) (0)
Genome sequencing and analysis of admixed genomes of African and Mexican ancestry: implications for personal ancestry reconstruction and multi-ethnic medical genomics (2010) (0)
Genotype file for Canine HD semi custom array (bed) (2015) (0)
Discovering prescription patterns in pediatric acute-onset neuropsychiatric syndrome patients (2020) (0)
Clonal haematopoiesis and risk of chronic liver disease (2023) (0)
Genetic and non-genetic factors affecting the expression of COVID-19-relevant genes in the large airway epithelium (2021) (0)
A Comparison of Classification Methods for Expression Quantitative Trait Loci (2014) (0)
Tracking genes and finding mutations: finding genes for complex traits in the domestic dog (Canis familiaris) (2010) (0)
Genotypes for Mt haplotypes (2015) (0)
The Out of Africa expansion affected accumulation of deleterious alleles in human genomes (2015) (0)
Genetics of morphological traits in the domestic dog. (2012) (0)
A Regression-based Approach for Estimating Recombination Rate from Population Genomic Data (2011) (0)
Blandin Anopheles gambiae Dissecting the Genetic Basis of Resistance to Malaria Parasites in (2014) (0)

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