Carlos F. López
#110,411
Most Influential Person Now
Biochemist
Carlos F. López's AcademicInfluence.com Rankings
Carlos F. Lópezbiology Degrees
Biology
#14199
World Rank
#17895
Historical Rank
Biochemistry
#2673
World Rank
#2855
Historical Rank

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Biology
Carlos F. López's Degrees
- Bachelors Biochemistry University of California, Berkeley
- PhD Biochemistry Stanford University
Why Is Carlos F. López Influential?
(Suggest an Edit or Addition)According to Wikipedia, Carlos Federico López Restrepo is a Colombian-American scientist who researches network-driven biological processes using computational tools. Until March 2022, López was an Associate Professor of Biochemistry & Pharmacology & Biomedical Informatics & Mechanical Engineering at Vanderbilt University. He is currently a Principal Scientist and the Multiscale Modeling Lead at Altos Labs.
Carlos F. López's Published Works
Number of citations in a given year to any of this author's works
Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- TOPICAL REVIEW: Coarse grain models and the computer simulation of soft materials (2004) (348)
- Understanding nature's design for a nanosyringe. (2004) (261)
- Hydrophobicity of protein surfaces: Separating geometry from chemistry (2008) (225)
- Programming biological models in Python using PySB (2013) (220)
- Hydrogen Bonding Structure and Dynamics of Water at the Dimyristoylphosphatidylcholine Lipid Bilayer Surface from a Molecular Dynamics Simulation (2004) (133)
- Rule‐based modeling: a computational approach for studying biomolecular site dynamics in cell signaling systems (2014) (115)
- Dynamical properties of a hydrated lipid bilayer from a multinanosecond molecular dynamics simulation. (2001) (114)
- A coarse grain model for n-alkanes parameterized from surface tension data (2003) (100)
- Mechanistic elements of protein cold denaturation. (2008) (98)
- Computer simulation studies of biomembranes using a coarse grain model (2002) (89)
- An unbiased metric of antiproliferative drug effect in vitro (2016) (85)
- Probing Membrane Insertion Activity of Antimicrobial Polymers via Coarse-grain Molecular Dynamics. (2006) (59)
- Systems-level network modeling of Small Cell Lung Cancer subtypes identifies master regulators and destabilizers (2018) (58)
- PyDREAM: high-dimensional parameter inference for biological models in python (2017) (48)
- Transmembrane peptide-induced lipid sorting and mechanism of Lalpha-to-inverted phase transition using coarse-grain molecular dynamics. (2004) (47)
- Structure and dynamics of model pore insertion into a membrane. (2005) (47)
- Molecular dynamics investigation of membrane-bound bundles of the channel-forming transmembrane domain of viral protein U from the human immunodeficiency virus HIV-1. (2002) (46)
- Molecular Dynamics Investigations of Lipid Langmuir Monolayers Using a Coarse-Grain Model (2003) (44)
- Charting the Fragmented Landscape of Drug Synergy. (2020) (42)
- Self-assembly of a phospholipid Langmuir monolayer using coarse-grained molecular dynamics simulations (2002) (38)
- Integrated, High-Throughput, Multiomics Platform Enables Data-Driven Construction of Cellular Responses and Reveals Global Drug Mechanisms of Action. (2017) (32)
- Modeling surfactant adsorption on hydrophobic surfaces. (2005) (29)
- Arrestin-3 scaffolding of the JNK3 cascade suggests a mechanism for signal amplification (2018) (26)
- Competition and allostery govern substrate selectivity of cyclooxygenase-2 (2015) (24)
- Heterodimetallic Palladium(II) Complexes with Bidentate (N,S) or Terdentate (C,N,S)- Ferrocenyl Ligands. The Effect of the Ligand Donor Atoms on the Regioselectivity of the Allylic Alkylation of Cinnamyl Acetate (2007) (21)
- MuSyC is a consensus framework that unifies multi-drug synergy metrics for combinatorial drug discovery (2021) (20)
- Cardiolipin-Dependent Properties of Model Mitochondrial Membranes from Molecular Simulations (2019) (19)
- Activated Oncogenic Pathway Modifies Iron Network in Breast Epithelial Cells: A Dynamic Modeling Perspective (2017) (18)
- Membrane bound hydraphiles facilitate cation translocation (2004) (15)
- GPU-powered model analysis with PySB/cupSODA (2017) (14)
- CASP11 – An Evaluation of a Modular BCL::Fold-Based Protein Structure Prediction Pipeline (2016) (11)
- Signal integration and information transfer in an allosterically regulated network (2019) (7)
- Interactive Multiresolution Visualization of Cellular Network Processes (2019) (7)
- Signal integration and information transfer in an allosterically regulated network (2019) (6)
- A Probabilistic Approach to Explore Signal Execution Mechanisms With Limited Experimental Data (2019) (6)
- ACDC: Automated Cell Detection and Counting for Time-Lapse Fluorescence Microscopy (2020) (6)
- A Consensus Framework Unifies Multi-Drug Synergy Metrics (2019) (5)
- Thunor: visualization and analysis of high-throughput dose–response datasets (2019) (4)
- Probability-based mechanisms in biological networks with parameter uncertainty (2021) (4)
- Visualization and analysis of high-throughput in vitro dose–response datasets with Thunor (2019) (2)
- Accelerated Simulations of Chemical Reaction Systems using the Stochastic Simulation Algorithm on GPUs (2020) (2)
- Unsupervised logic-based mechanism inference for network-driven biological processes (2020) (2)
- Programmatic modeling for biological systems (2021) (2)
- Programmatic modeling for biological systems. (2021) (2)
- Selective Inhibition of JAK1 Primes STAT5-Driven Human Leukemia Cells for ATRA-Induced Differentiation (2021) (1)
- Estimation of BOP Stack Drag and Added Mass Using Computational Fluid Dynamics (2017) (1)
- A computational framework to explore cellular response mechanisms from multi-omics datasets (2020) (1)
- GPU-powered sensitivity analysis of a large-scale model of death cell signaling and proliferation in cancer cells (2015) (1)
- Distinct execution modes of a biochemical necroptosis model explain cell type-specific responses and variability to cell-death cues (2022) (1)
- Understanding and Tracking Pro- and Anti-Apoptotic BCL-2 protein Interactions and their Relation to Cancer in Extrinsic Apoptosis (2011) (0)
- Crustallization and structure of microbial polyesters, carbohydrate-based polyamides and n-polyurethanes (2010) (0)
- Pysb: A Modeling Framework to Explore Biochemical Signaling Processes and Cell-Decisions (2014) (0)
- A Programmatic Modeling Approach to Explore Alternative Hypothesis of Mitochondrial Regulation in Extrinsic Apoptosis Signaling (2013) (0)
- The misleading certainty of uncertain data in biological network processes (2021) (0)
- Abstract 2702: Multi-omics data integration of early lung adenocarcinoma reveals an association between radiomics features and tumor biology (2022) (0)
- Abstract PR3: Considering alternate signaling mechanisms models in extrinsic apoptosis using programmatic modeling approaches (2012) (0)
- A Bayesian approach to explore signal execution mechanisms in programmed cell death (2019) (0)
- Unified Tumor Growth Mechanisms from Multimodel Inference and Dataset Integration (2023) (0)
- Automatic mechanistic inference from large families of Boolean models generated by Monte Carlo Tree Search (2022) (0)
- Abstract 4626: Quantifying erlotinib response variability in EGFR-addicted cells. (2013) (0)
- Microbench: automated metadata management for systems biology benchmarking and reproducibility in Python (2021) (0)
- Identification of execution modes in the extrinsic apoptosis signaling network via Bayesian inference methods (2019) (0)
- Model certainty in cellular network-driven processes with missing data. (2023) (0)
- A dynamical low-rank approach to solve the chemical master equation for biological reaction networks (2022) (0)
- Studies of membrane and membrane protein systems using molecular dynamics simulations (2004) (0)
- Abstract 3763: How stochastic single-cell fate decisions drive population dynamics in oncogene-addicted cancer (2015) (0)
- Cardiolipin-Dependent Properties of Model Mitochondrial Membranes from Molecular Dynamics Simulations (2019) (0)
- A biochemical necroptosis model explains cell type-specific responses to cell-death cues. (2023) (0)
- GPU computing for accelerated analyses of a large-scale model of cell fate in cancer cells (2015) (0)
- Processes in DNA damage response from a whole-cell multi-omics perspective (2022) (0)
- Automated tropical algebra reduction and hybridization of biological models (2015) (0)
- Use of biological model-programs in PySB to explore and calibrate cell-death decisions (2014) (0)
- Particle-Based Stochastic Reaction-Di ↵ usion Models in Biology November 9-14 2014 (2014) (0)
- Predictive uncertainty in mechanistic models of cellular processes calibrated to experimental data (2022) (0)
- Abstract 3726: INCB52793 JAK1 inhibitor synergizes with ATRA to inhibit expansion of AML (2017) (0)
- Modeling Extrinsic Apoptosis Regulatory Network Pathways Using A Rules-based Framework (2009) (0)
- Data-driven structural analysis of Small Cell Lung Cancer transcription factor network suggests potential subtype regulators and transition pathways (2023) (0)
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What Schools Are Affiliated With Carlos F. López?
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