Carol Friedman
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Carol Friedmancomputer-science Degrees
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Informatics
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Computational Linguistics
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Machine Learning
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Computer Science
Carol Friedman's Degrees
- PhD Biomedical Informatics Columbia University
- Masters Computer Science Stanford University
- Bachelors Computer Science Stanford University
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Why Is Carol Friedman Influential?
(Suggest an Edit or Addition)According to Wikipedia, Carol Friedman is a scientist and biomedical informatician. She is among the pioneers the use of expert systems in medical language processing and the explicit medical concept representation underpinning the use of entity–attribute–value modeling underpinning electronic medical records.
Carol Friedman's Published Works
Published Works
- Research Paper: A General Natural-language Text Processor for Clinical Radiology (1994) (745)
- GENIES: a natural-language processing system for the extraction of molecular pathways from journal articles (2001) (576)
- Unlocking Clinical Data from Narrative Reports: A Study of Natural Language Processing (1995) (367)
- Novel Data‐Mining Methodologies for Adverse Drug Event Discovery and Analysis (2012) (329)
- Research Paper: Active Computerized Pharmacovigilance Using Natural Language Processing, Statistics, and Electronic Health Records: A Feasibility Study (2009) (283)
- Research Paper: Automated Encoding of Clinical Documents Based on Natural Language Processing (2004) (249)
- A broad-coverage natural language processing system (2000) (249)
- Using BLAST for identifying gene and protein names in journal articles. (2000) (234)
- Medical Language Processing: Computer Management of Narrative Data (1987) (224)
- Two biomedical sublanguages: a description based on the theories of Zellig Harris (2002) (221)
- Research Paper: Automated Acquisition of Disease-Drug Knowledge from Biomedical and Clinical Documents: An Initial Study (2008) (202)
- Use of natural language processing to translate clinical information from a database of 889,921 chest radiographic reports. (2002) (202)
- Exploiting Semantic Relations for Literature-Based Discovery (2006) (180)
- Validating drug repurposing signals using electronic health records: a case study of metformin associated with reduced cancer mortality (2014) (179)
- Natural language processing and its future in medicine. (1999) (169)
- Mining multi-item drug adverse effect associations in spontaneous reporting systems (2010) (168)
- Information theory applied to the sparse gene ontology annotation network to predict novel gene function (2007) (167)
- Gene name ambiguity of eukaryotic nomenclatures (2005) (159)
- Combing signals from spontaneous reports and electronic health records for detection of adverse drug reactions (2013) (158)
- Medical Informatics: Knowledge Management and Data Mining in Biomedicine (Operations Research/Computer Science Interfaces) (2005) (155)
- Drug-drug interaction through molecular structure similarity analysis (2012) (155)
- Research Paper: Mapping Abbreviations to Full Forms in Biomedical Articles (2002) (152)
- Towards a comprehensive medical language processing system: methods and issues (1997) (142)
- Similarity-based modeling in large-scale prediction of drug-drug interactions (2014) (136)
- Research Paper: Representing Information in Patient Reports Using Natural Language Processing and the Extensible Markup Language (1999) (132)
- Research Paper: Automatic Resolution of Ambiguous Terms Based on Machine Learning and Conceptual Relations in the UMLS (2002) (129)
- Natural language processing in an operational clinical information system (1995) (121)
- Disambiguating Ambiguous Biomedical Terms in Biomedical Narrative Text: An Unsupervised Method (2001) (120)
- Natural language processing: State of the art and prospects for significant progress, a workshop sponsored by the National Library of Medicine (2013) (119)
- Detection of Pharmacovigilance‐Related Adverse Events Using Electronic Health Records and Automated Methods (2012) (118)
- Extracting Information on Pneumonia in Infants Using Natural Language Processing of Radiology Reports (2005) (116)
- Evaluating Natural Language Processors in the Clinical Domain (1998) (115)
- Identification of findings suspicious for breast cancer based on natural language processing of mammogram reports (1997) (111)
- Proton Pump Inhibitors and Risk for Recurrent Clostridium difficile Infection Among Inpatients (2013) (108)
- A Generalized Relational Schema for an Integrated Clinical Patient Database. (1990) (106)
- Biological Nomenclatures: A Source of Lexical Knowledge and Ambiguity (2003) (100)
- Identification of suspected tuberculosis patients based on natural language processing of chest radiograph reports. (1996) (97)
- A Study of Abbreviations in Clinical Notes (2007) (96)
- PhenoGO: Assigning Phenotypic Context to Gene Ontology Annotations with Natural Language Processing (2005) (94)
- Detection of drug‐drug interactions through data mining studies using clinical sources, scientific literature and social media (2018) (93)
- Detection of Drug-Drug Interactions by Modeling Interaction Profile Fingerprints (2013) (90)
- Extracting Findings from Narrative Reports: Software Transferability and Sources of Physician Disagreement (1998) (89)
- Comparing ICD9-Encoded Diagnoses and NLP-Processed Discharge Summaries for Clinical Trials Pre-Screening: A Case Study (2008) (85)
- Knowledge Management, Data Mining, and Text Mining in Medical Informatics (2005) (84)
- A study of abbreviations in MEDLINE abstracts (2002) (84)
- Architectural requirements for a multipurpose natural language processor in the clinical environment. (1995) (83)
- Research Paper: A Multi-aspect Comparison Study of Supervised Word Sense Disambiguation (2004) (83)
- A study of abbreviations in the UMLS (2001) (81)
- Deep Phenotyping on Electronic Health Records Facilitates Genetic Diagnosis by Clinical Exomes. (2018) (81)
- A knowledge model for analysis and simulation of regulatory networks (2000) (80)
- Automating a severity score guideline for community-acquired pneumonia employing medical language processing of discharge summaries (1999) (80)
- Facilitating Cancer Research using Natural Language Processing of Pathology Reports (2004) (79)
- PERSIVAL, a system for personalized search and summarization over multimedia healthcare information (2001) (73)
- Automatic extraction of gene and protein synonyms from MEDLINE and journal articles (2002) (72)
- Discovering Novel Adverse Drug Events Using Natural Language Processing and Mining of the Electronic Health Record (2009) (71)
- Evaluating the UMLS as a source of lexical knowledge for medical language processing (2001) (69)
- Methods for Identifying Suicide or Suicidal Ideation in EHRs (2012) (69)
- Biclustering of Adverse Drug Events in the FDA's Spontaneous Reporting System (2011) (69)
- A collaborative approach to developing an electronic health record phenotyping algorithm for drug-induced liver injury. (2013) (68)
- Research Paper: The Canon Group's Effort: Working Toward a Merged Model (1995) (67)
- Automated Knowledge Acquisition from Clinical Narrative Reports (2008) (64)
- Facilitating adverse drug event detection in pharmacovigilance databases using molecular structure similarity: application to rhabdomyolysis (2011) (64)
- Automating SNOMED coding using medical language understanding: a feasibility study (2001) (63)
- Mining Terminological Knowledge in Large Biomedical Corpora (2002) (63)
- Extracting Phenotypic Information from the Literature via Natural Language Processing (2004) (62)
- Research Paper: A Reliability Study for Evaluating Information Extraction from Radiology Reports (1999) (62)
- Discovery of Protein Interaction Networks Shared by Diseases (2006) (62)
- Of truth and pathways: chasing bits of information through myriads of articles (2002) (62)
- Machine learning and word sense disambiguation in the biomedical domain: design and evaluation issues (2006) (60)
- System Architecture for Temporal Information Extraction, Representationand Reasoning in Clinical Narrative Reports (2005) (59)
- Gene symbol disambiguation using knowledge-based profiles (2007) (59)
- Introduction: named entity recognition in biomedicine (2004) (54)
- Research Paper: A Schema for Representing Medical Language Applied to Clinical Radiology (1994) (54)
- Coding Neuroradiology Reports for the Northern Manhattan Stroke Study: A Comparison of Natural Language Processing and Manual Review (2000) (53)
- Natural Language and Text Processing in Biomedicine (2006) (51)
- Statistical Mining of Potential Drug Interaction Adverse Effects in FDA's Spontaneous Reporting System. (2010) (51)
- Limited parsing of notational text visit notes: ad-hoc vs. NLP approaches (2000) (51)
- Discovering Disease Associations by Integrating Electronic Clinical Data and Medical Literature (2011) (51)
- Mining electronic health records for adverse drug effects using regression based methods (2010) (50)
- Selecting information in electronic health records for knowledge acquisition (2010) (50)
- Representing genomic knowledge in the UMLS semantic network (1999) (48)
- Natural Language Processing in Health Care and Biomedicine (2014) (47)
- Research Paper: Quantitative Assessment of Dictionary-based Protein Named Entity Tagging (2006) (47)
- A Method to Combine Signals from Spontaneous Reporting Systems and Observational Healthcare Data to Detect Adverse Drug Reactions (2015) (47)
- Novel (coumarin-3-yl)carbamates as selective MAO-B inhibitors: synthesis, in vitro and in vivo assays, theoretical evaluation of ADME properties and docking study. (2013) (46)
- A drug-adverse event extraction algorithm to support pharmacovigilance knowledge mining from PubMed citations. (2011) (45)
- Research Paper: Semantic Classification of Biomedical Concepts Using Distributional Similarity (2007) (43)
- A method for controlling complex confounding effects in the detection of adverse drug reactions using electronic health records (2014) (43)
- Information Visualization Techniques in Bioinformatics during the Postgenomic Era. (2004) (43)
- Potential utility of precision medicine for older adults with polypharmacy: a case series study (2016) (42)
- Probabilistic inference of molecular networks from noisy data sources (2004) (40)
- Biological, translational, and clinical language processing (2007) (37)
- Using Metadata to Integrate Medical Knowledge in a Clinical Information System (1990) (37)
- PhenoGO: an integrated resource for the multiscale mining of clinical and biological data (2009) (36)
- Characterizing environmental and phenotypic associations using information theory and electronic health records (2009) (35)
- ISO reference terminology models for nursing: Applicability for natural language processing of nursing narratives (2005) (35)
- An evaluation of natural language processing methodologies (1998) (35)
- Deriving comorbidities from medical records using Natural Language Processing (2013) (34)
- Automating ICD-9-CM Encoding Using Medical Language Processing: A Feasibility Study (2000) (34)
- Combining Corpus-derived Sense Profiles with Estimated Frequency Information to Disambiguate Clinical Abbreviations (2012) (32)
- Enhancing Adverse Drug Event Detection in Electronic Health Records Using Molecular Structure Similarity: Application to Pancreatitis (2012) (32)
- CliniViewer: A Tool for Viewing Electronic Medical Records Based on Natural Language Processing and XML (2004) (31)
- A WEB-Based Version of MedLEE: A Medical Language Extraction and Encoding System (1996) (30)
- Methods for Building Sense Inventories of Abbreviations in Clinical Notes (2008) (30)
- Semantic Text Parsing for Patient Records (2005) (29)
- Bio-Ontology and text: bridging the modeling gap (2006) (28)
- Pharmacogenetic polymorphism as an independent risk factor for frequent hospitalizations in older adults with polypharmacy: a pilot study (2016) (28)
- Literature-Based Knowledge Discovery using Natural Language Processing (2008) (27)
- A comparison of the Charlson comorbidities derived from medical language processing and administrative data (2002) (25)
- Determining the reasons for medication prescriptions in the EHR using knowledge and natural language processing. (2011) (25)
- Research Paper: Syndromic Surveillance Using Ambulatory Electronic Health Records (2009) (24)
- A General Computational Treatment of the Comparative (1989) (24)
- UMLS as Knowledge Base-A Rule-Based Expert System Approach to Controlled Medical Vocabulary Management. (1990) (23)
- Toward multimodal signal detection of adverse drug reactions (2017) (23)
- Integrating data from natural language processing into a clinical information system. (1996) (22)
- Qualitative assessment of the International Classification of Functioning, Disability, and Health with respect to the desiderata for controlled medical vocabularies (2006) (21)
- Medication-indication knowledge bases: a systematic review and critical appraisal (2015) (20)
- Generating Executable Knowledge for Evidence-Based Medicine Using Natural Language and Semantic Processing (2006) (20)
- Medical text processing: past achievements, future directions (1992) (20)
- Proceedings of the Workshop on BioNLP 2007: Biological, Translational, and Clinical Language Processing (2007) (19)
- A Database of Computer-Structured Narrative: Methods of Computing Complex Relations. (1985) (18)
- Predicting monoamine oxidase inhibitory activity through ligand-based models. (2012) (18)
- Facilitating Research in Pathology using Natural Language Processing (2003) (18)
- Ensembles of natural language processing systems for portable phenotyping solutions (2019) (18)
- Terminology model discovery using natural language processing and visualization techniques (2006) (18)
- An automated tool for detecting medication overuse based on the electronic health records (2013) (18)
- Visualizing information across multidimensional post-genomic structured and textual databases (2005) (18)
- A vocabulary development and visualization tool based on natural language processing and the mining of textual patient reports (2003) (17)
- Similarity-Based Modeling Applied to Signal Detection in Pharmacovigilance (2014) (17)
- Research Paper: Human and Automated Coding of Rehabilitation Discharge Summaries According to the International Classification of Functioning, Disability, and Health (2006) (17)
- Using Knowledge Sources to Improve Classification of Medical Text Reports (2000) (16)
- State of the art and development of a drug-drug interaction large scale predictor based on 3D pharmacophoric similarity. (2014) (16)
- Deriving a probabilistic syntacto-semantic grammar for biomedicine based on domain-specific terminologies (2011) (16)
- A Comparison of Semantic Categories of the ISO Reference Terminology Models for Nursing and the MedLEE Natural Language Processing System (2004) (16)
- Word Sense Disambiguation via Semantic Type Classification (2008) (16)
- Using contextual and lexical features to restructure and validate the classification of biomedical concepts (2007) (15)
- Isolating Domain Dependencies In Natural Language Interfaces (1983) (14)
- Automatic Summarization of Patient Discharge Summaries to Create Problem Lists using Medical Language Processing (2004) (14)
- Natural Language Interfaces Using Limited Semantic Information (1982) (14)
- Semantic reclassification of the UMLS concepts (2008) (14)
- A new clustering method for detecting rare senses of abbreviations in clinical notes (2012) (14)
- Using Rich Data on Comorbidities in Case-Control Study Design with Electronic Health Record Data Improves Control of Confounding in the Detection of Adverse Drug Reactions (2016) (13)
- Detection of Practice Pattern Trends through Natural Language Processing of Clinical Narratives and Biomedical Literature (2007) (13)
- Research Paper: Methods for Building Sense Inventories of Abbreviations in Clinical Notes (2009) (13)
- Transporting the linguistic string project system from a medical to a Navy domain (1985) (13)
- A method for vocabulary development and visualization based on medical language processing and XML (2000) (11)
- What do ER physicians really want? A method for elucidating ER information needs (1999) (11)
- Disseminating Natural Language Processed Clinical Narratives (2006) (11)
- Integrating heterogeneous knowledge sources to acquire executable drug-related knowledge. (2010) (11)
- Monitoring prescribing patterns using regression and electronic health records (2017) (9)
- Computer-Structured Narrative in Ambulatory Care: Its Use in Longitudinal Review of Clinical Data. (1985) (8)
- A two-site survey of medical center personnel’s willingness to share clinical data for research: implications for reproducible health NLP research (2018) (8)
- Evaluation considerations for EHR-based phenotyping algorithms: A case study for drug-induced liver injury (2013) (8)
- Processing free-text input to obtain a database of medical information (1985) (8)
- Computer Structuring of Free-Text Patient Data (1983) (8)
- Natural language processing and visualization in the molecular imaging domain (2007) (8)
- A Natural Language Processing (NLP) Tool to Assist in the Curation Of the Laboratory Mouse Tumor Biology Database (2006) (7)
- Two Applications of Statistical Modelling to Natural Language Processing (1995) (7)
- Extending a Medical Language Processing System to the Functional Status Domain (2005) (6)
- Natural Language Processing for Health-Related Texts (2021) (6)
- Semantic Classification of Biomedical Concepts Using (2007) (6)
- Automated Summarization of Publications Associated with Adverse Drug Reactions from PubMed (2016) (6)
- Natural Language Processing Challenges in HIV/AIDS Clinic Notes (2003) (6)
- An automated system for retrieving herb-drug interaction related articles from MEDLINE (2016) (6)
- Combining multiple evidence for gene symbol disambiguation (2007) (6)
- Pharmacogenomic Approaches for Automated Medication Risk Assessment in People with Polypharmacy (2018) (6)
- Automated Determination of Publications Related to Adverse Drug Reactions in PubMed (2015) (5)
- Automated Metabolic Phenotyping of Cytochrome Polymorphisms Using PubMed Abstract Mining (2017) (5)
- The Columbia Integrated Speech Interpretation System (CISIS) (1995) (5)
- Representing nested semantic information in a linear string of text using XML (2002) (4)
- A rule-based approach for automatically identifying gene and protein names in MEDLINE abstracts (2002) (4)
- Combining Heterogeneous Databases to Detect Adverse Drug Reaction (2014) (4)
- Using BLAST, A DNA and Protein Sequence Comparison Tool, for Finding Gene and Protein Names in Journal Articles (2000) (4)
- Natural Language Processing in the Molecular Imaging Domain (2005) (3)
- Linking Biomedical Language, Information and Knowledge - Session Introduction (2003) (3)
- A Native XML Database Design for Clinical Document Research (2003) (3)
- ZebraHunter: Searching Rare Medical Diagnoses and Retrieving Relevant Citations (2006) (3)
- Towards automatic extraction of research findings from the literature. (2007) (3)
- Evaluation of an Ontology-anchored Natural Language-based Approach for Asserting Multi-scale Biomolecular Networks for Systems Medicine (2010) (3)
- Information-Theoretic Classification of SNOMED Improves the Organization of Context-Sensitive Excerpts from Cochrane Reviews (2007) (2)
- Using Distributional Analysis to Semantically Classify UMLS Concepts (2007) (2)
- HospSum: Integrating physician discharge notes with coded nursing care data to generate patient-centric summaries (2013) (2)
- Natural Language as a Tool in the Development of a Controlled Vocabulary (1998) (2)
- Generating quality word sense disambiguation test sets based on MeSH indexing (2009) (2)
- JASIST special issue on biomedical information retrieval (2017) (2)
- A computational treatment of the comparative (1989) (2)
- Modeling Natural Language Data for Automatic Creation of a Database from Free-Text Input. (1985) (1)
- Implementing automated delivery of evidence-based medication safety information to the point of care (2015) (1)
- Linking Protein Interaction Data to the MESH Hierarchy (2001) (1)
- Combining Contextual and Lexical Features to Classify UMLS Concepts (2007) (1)
- Validation of the Behavior of a Knowledge Base Implementing Clinical Guidelines for Point-of-Care Antiretroviral Toxicity Monitoring (2018) (1)
- GeneWays: A System for Mining Text and for Integrating Data on Molecular Pathways (2001) (1)
- Knowledge-driven Highlighting of Clinical Texts: Does it Help or Distract? (2000) (1)
- Extracting Information on Pneumonia in Infants Using Natural Language Processing of Radiology Reports (2003) (1)
- Electronic health record data suggests metformin improves cancer survival: A new model for drug repurposing studies (2012) (1)
- Developing a Formal Representation for Medication Appropriateness Criteria (2014) (1)
- Continuous-Speech Structured Reporting (1998) (0)
- A Knowledge Model for Analysis and Simulation of Regulatory Based on Information in Electronic Publications (1999) (0)
- Limited Parsing ofNotational TextVisit Notes: Ad-hoc vs.NLPApproaches (2000) (0)
- Extraction of Information from Emergency Medical Services Incident Narratives (2001) (0)
- Response to Abdallah et al. (2014) (0)
- You Can't Judge a Book by Its Cover: Rethinking the Open Rainscreen for the Exterior Building Envelope (2011) (0)
- Implementing Literature-based Discovery System Using Semantic Relations (2007) (0)
- Methodologies for Medical Computing. Date Bases and Management Database Management: Computer Structuring of Free-Text Patient Data (1983) (0)
- Crowdsourcing Public Opinion for Sharing Medical Records for the Advancement of Science (2019) (0)
- Issues in Representing Biological and Clinical Phenotypes Using the Formal Models (2006) (0)
- Representation of Genetic Variants in Genomic Sequencing Reports (2015) (0)
- Workshop on natural language processing: State of the art, future directions and applications for enhancing clinical decision making: (615572012-001) (2012) (0)
- Identification of Inflammatory Bowel Disease Patients with Steroid-induced Diabetes Mellitus Using an Electronic Health Record (2014) (0)
- MAC Annotator: An interactive tool for translating medication appropriateness criteria into structured form (2015) (0)
- 4429 Powering precision medicine research with the efficient construction of large diverse cohorts (2020) (0)
- Identifying overuse of medications using natural language processing and electronic health records (2012) (0)
- Response to Daniell (2014) (0)
- Data and text mining Gene symbol disambiguation using knowledge-based profiles (2007) (0)
- A Phenome-Wide Association Study Through Secondary Uses of Clinical and Research Data (2009) (0)
- Chapter 15 SEMANTIC TEXT PARSING FOR PATIENT RECORDS (2007) (0)
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