Cathy H. Wu | Academic Influence

Cathy H. Wu's AcademicInfluence.com Rankings

Cathy H. Wu

Biology

#2372

World Rank

#3774

Historical Rank

Bioinformatics

#33

World Rank

#33

Historical Rank

Computational Biology

#144

World Rank

#144

Historical Rank

biology Degrees

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Biology

Cathy H. Wu's Degrees

PhD Computer Science University of California, Santa Cruz
Masters Computer Science University of California, Santa Cruz
Bachelors Computer Science University of California, Santa Cruz

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Why Is Cathy H. Wu Influential?

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According to Wikipedia, Cathy H. Wu is the Edward G. Jefferson Chair and professor and director of the Center for Bioinformatics & Computational Biology at the University of Delaware. She is also the director of the Protein Information Resource and the North east Bioinformatics Collaborative Steering Committee, and the adjunct professor at the Georgetown University Medical Center.

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Cathy H. Wu's Published Works

Number of citations in a given year to any of this author's works

Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author

Published Works

UniProt: the Universal Protein knowledgebase (2004) (7175)
The Universal Protein Resource (UniProt) (2004) (3958)
UniProt: the universal protein knowledgebase in 2021 (2020) (3156)
UniProt: A hub for protein information (2015) (2447)
InterPro: the integrative protein signature database (2008) (1850)
Activities at the Universal Protein Resource (UniProt) (2013) (1821)
UniProt: the universal protein knowledgebase (2016) (1805)
The Gene Ontology resource: enriching a GOld mine (2020) (1508)
InterPro in 2017—beyond protein family and domain annotations (2016) (1217)
The InterPro protein families database: the classification resource after 15 years (2014) (1186)
The Universal Protein Resource (UniProt): an expanding universe of protein information (2005) (1115)
InterPro in 2011: new developments in the family and domain prediction database (2011) (1100)
UniRef: comprehensive and non-redundant UniProt reference clusters (2007) (1080)
UniRef clusters: a comprehensive and scalable alternative for improving sequence similarity searches (2014) (968)
The InterPro protein families and domains database: 20 years on (2020) (858)
The Universal Protein Resource (UniProt) in 2010 (2010) (830)
InterPro, progress and status in 2005 (2004) (573)
New developments in the InterPro database (2007) (542)
The Protein Information Resource (2003) (450)
The Universal Protein Resource (UniProt) (2006) (369)
Accomplishments and challenges in literature data mining for biology (2002) (347)
The Human Proteome Project: Current State and Future Direction (2011) (328)
The Protein Information Resource: an integrated public resource of functional annotation of proteins (2002) (233)
The Protein Information Resource (PIR) (2000) (208)
PIRSF: family classification system at the Protein Information Resource (2004) (204)
Proteomic and bioinformatic characterization of the biogenesis and function of melanosomes. (2006) (180)
Software for pre-processing Illumina next-generation sequencing short read sequences (2014) (178)
Text mining for the biocuration workflow (2012) (172)
Protein Bioinformatics Databases and Resources. (2017) (162)
Protein sequence databases. (2004) (154)
Activities at the Universal Protein Resource (UniProt) (2014) (144)
The Protein Ontology: a structured representation of protein forms and complexes (2010) (143)
Protein family classification and functional annotation (2003) (137)
BioThesaurus: a web-based thesaurus of protein and gene names (2006) (134)
Protein classification artificial neural system (1992) (129)
Prediction of catalytic residues using Support Vector Machine with selected protein sequence and structural properties (2006) (124)
UniProt: the Universal Protein Knowledgebase in 2023 (2022) (124)
Overview of the BioCreative III Workshop (2011) (118)
New techniques for extracting features from protein sequences (2001) (117)
Artificial Neural Networks for Molecular Sequence Analysis (1997) (116)
The iProClass integrated database for protein functional analysis (2004) (112)
Oncogenic fusion protein EWS-FLI1 is a network hub that regulates alternative splicing (2015) (110)
Framework for a Protein Ontology (2006) (109)
Literature mining and database annotation of protein phosphorylation using a rule-based system (2005) (103)
Representative Proteomes: A Stable, Scalable and Unbiased Proteome Set for Sequence Analysis and Functional Annotation (2011) (98)
BioCreative III interactive task: an overview (2011) (96)
The PIR-International Protein Sequence Database (1999) (95)
Neural networks and genome informatics (2000) (94)
Protein Information Resource: a community resource for expert annotation of protein data (2001) (92)
A fast Peptide Match service for UniProt Knowledgebase (2013) (91)
iPTMnet: an integrated resource for protein post-translational modification network discovery (2017) (89)
An overview of the BioCreative 2012 Workshop Track III: interactive text mining task (2013) (88)
PIRSF Family Classification System for Protein Functional and Evolutionary Analysis (2006) (85)
Research Paper: BioTagger-GM: A Gene/Protein Name Recognition System (2009) (83)
Overview of the interactive task in BioCreative V (2015) (83)
Neural networks for full-scale protein sequence classification: Sequence encoding with singular value decomposition (1995) (81)
Molecular mechanisms mediating the effect of mono-(2-ethylhexyl) phthalate on hormone-stimulated steroidogenesis in MA-10 mouse tumor Leydig cells. (2010) (78)
Transcription factors and genetic circuits orchestrating the complex, multilayered response of Clostridium acetobutylicum to butanol and butyrate stress (2013) (76)
Protein Ontology: a controlled structured network of protein entities (2013) (75)
InterPro in 2022 (2022) (73)
Application of neural networks to biological data mining: a case study in protein sequence classification (2000) (69)
SkateBase, an elasmobranch genome project and collection of molecular resources for chondrichthyan fishes (2014) (65)
Protein Ontology (PRO): enhancing and scaling up the representation of protein entities (2016) (63)
Elevated FGF21 secretion, PGC-1α and ketogenic enzyme expression are hallmarks of iron-sulfur cluster depletion in human skeletal muscle. (2014) (60)
Community annotation and bioinformatics workforce development in concert—Little Skate Genome Annotation Workshops and Jamborees (2012) (59)
miRTex: A Text Mining System for miRNA-Gene Relation Extraction (2015) (57)
DNA sequence classification via an expectation maximization algorithm and neural networks: a case study (2001) (57)
iProClass: an integrated database of protein family, function and structure information (2003) (56)
A comprehensive protein-centric ID mapping service for molecular data integration (2011) (55)
Comparative Bioinformatics Analyses and Profiling of Lysosome-Related Organelle Proteomes. (2007) (52)
iProLINK: an integrated protein resource for literature mining (2004) (52)
BioCreative-IV virtual issue (2014) (51)
Omics-based molecular target and biomarker identification. (2011) (51)
RNA-Seq Analysis of Abdominal Fat in Genetically Fat and Lean Chickens Highlights a Divergence in Expression of Genes Controlling Adiposity, Hemostasis, and Lipid Metabolism (2015) (49)
Research Paper: Quantitative Assessment of Dictionary-based Protein Named Entity Tagging (2006) (47)
Motif identification neural design for rapid and sensitive protein family search (1996) (45)
PIR: a new resource for bioinformatics (2000) (44)
Plant Protein Annotation in the UniProt Knowledgebase1 (2005) (42)
DynGO: a tool for visualizing and mining of Gene Ontology and its associations (2005) (40)
RLIMS-P 2.0: A Generalizable Rule-Based Information Extraction System for Literature Mining of Protein Phosphorylation Information (2015) (40)
Integration of bioinformatics resources for functional analysis of gene expression and proteomic data. (2007) (40)
Natural Autofluorescence in Fungi, and its Correlation With Viability (1984) (39)
iProClass: an integrated, comprehensive and annotated protein classification database (2001) (39)
An online literature mining tool for protein phosphorylation (2006) (39)
Proteomic Analysis of Pathways Involved in Estrogen-Induced Growth and Apoptosis of Breast Cancer Cells (2011) (38)
Structural and functional studies of S-adenosyl-L-methionine binding proteins: a ligand-centric approach (2013) (38)
BIO-AJAX: an extensible framework for biological data cleaning (2004) (38)
iSimp: A sentence simplification system for biomedicail text (2012) (38)
Computational analysis and identification of amino acid sites in dengue E proteins relevant to development of diagnostics and vaccines (2007) (37)
A crowdsourcing open platform for literature curation in UniProt (2021) (36)
A comparison study on algorithms of detecting long forms for short forms in biomedical text (2007) (35)
Prediction of residue-residue contact matrix for protein-protein interaction with Fisher score features and deep learning. (2016) (35)
Neural Networks for Molecular Sequence Classification (1993) (33)
The eFIP system for text mining of protein interaction networks of phosphorylated proteins (2012) (32)
Gene classification artificial neural system (1995) (32)
Computational Biology and Genome Informatics (2003) (31)
Integrated Bioinformatics for Radiation-Induced Pathway Analysis from Proteomics and Microarray Data. (2008) (31)
Update on genome completion and annotations: Protein Information Resource (2004) (29)
Dependence network modeling for biomarker identification (2007) (28)
A generalizable NLP framework for fast development of pattern-based biomedical relation extraction systems (2014) (28)
ProClass Protein Family Database (1999) (28)
BioCreative V BioC track overview: collaborative biocurator assistant task for BioGRID (2016) (27)
Construction of phosphorylation interaction networks by text mining of full-length articles using the eFIP system (2015) (27)
Community annotation in biology (2010) (27)
Gene and protein profiling of the response of MA-10 Leydig tumor cells to human chorionic gonadotropin. (2004) (27)
TnCentral: a Prokaryotic Transposable Element Database and Web Portal for Transposon Analysis (2021) (26)
Document Classification for Mining Host Pathogen Protein-Protein Interactions (2008) (25)
An extended dependency graph for relation extraction in biomedical texts (2015) (25)
Protein Name Tagging Guidelines: Lessons Learned (2005) (25)
iPTMnet: Integrative Bioinformatics for Studying PTM Networks. (2017) (24)
Substring selection for biomedical document classification (2006) (24)
Construction of protein phosphorylation networks by data mining, text mining and ontology integration: analysis of the spindle checkpoint (2013) (23)
BioCreative-2012 Virtual Issue (2012) (23)
Systems Integration of Biodefense Omics Data for Analysis of Pathogen-Host Interactions and Identification of Potential Targets (2009) (23)
An Automatic System for Extracting Figures and Captions in Biomedical PDF Documents (2011) (23)
Protein bioinformatics databases and resources. (2011) (22)
Phylogenomic Analysis of Marine Roseobacters (2010) (22)
The representation of protein complexes in the Protein Ontology (PRO) (2011) (21)
UniProt genomic mapping for deciphering functional effects of missense variants (2017) (21)
piNET: a versatile web platform for downstream analysis and visualization of proteomics data (2019) (21)
Integrative annotation and knowledge discovery of kinase post-translational modifications and cancer-associated mutations through federated protein ontologies and resources (2018) (21)
Alterations in the Global Proteome and Phosphoproteome in Third Generation EGFR TKI Resistance Reveal Drug Targets to Circumvent Resistance (2021) (21)
Transcriptional profiling of liver during the critical embryo-to-hatchling transition period in the chicken (Gallus gallus) (2018) (20)
Large‐scale, classification‐driven, rule‐based functional annotation of proteins (2005) (20)
Computational identification of strain-, species- and genus-specific proteins (2005) (20)
Tunable synthetic extracellular matrices to investigate breast cancer response to biophysical and biochemical cues (2019) (20)
RLIMS-P: an online text-mining tool for literature-based extraction of protein phosphorylation information (2014) (20)
Protein Bioinformatics Infrastructure for the Integration and Analysis of Multiple High-Throughput “omics” Data (2010) (19)
A framework for biomedical figure segmentation towards image-based document retrieval (2013) (19)
Protein Bioinformatics From Protein Modifications and Networks to Proteomics (2017) (19)
Classification Neural Networks for Rapid Sequence Annotation and Automated Database Organization (1993) (19)
Identifying Comparative Structures in Biomedical Text (2017) (18)
Inference of protein-protein interaction networks from multiple heterogeneous data (2015) (18)
BioC interoperability track overview (2014) (18)
An emerging cyberinfrastructure for biodefense pathogen and pathogen–host data (2007) (18)
miRiaD: A Text Mining Tool for Detecting Associations of microRNAs with Diseases (2016) (18)
A Protein Class Database Organized with ProSite Protein Groups and PIR Superfamilies (1996) (17)
Prediction of contact matrix for protein-protein interaction (2013) (17)
GeneFIND web server for protein family identification and information retrieval (1998) (17)
Noise Reduction Methods for Distantly Supervised Biomedical Relation Extraction (2017) (16)
Using distant supervision to augment manually annotated data for relation extraction (2019) (16)
Sequence signatures in envelope protein may determine whether flaviviruses produce hemorrhagic or encephalitic syndromes (2009) (16)
iTextMine: integrated text-mining system for large-scale knowledge extraction from the literature (2018) (16)
pGenN, a Gene Normalization Tool for Plant Genes and Proteins in Scientific Literature (2015) (15)
PROCANS: a protein classification system using a neural network (1990) (15)
Coordination between TGF-β cellular signaling and epigenetic regulation during epithelial to mesenchymal transition (2019) (15)
InterPro in 2011: new developments in the family and domain prediction database (2012) (14)
eGARD: Extracting associations between genomic anomalies and drug responses from text (2017) (13)
Understanding ER+ Breast Cancer Dormancy Using Bioinspired Synthetic Matrices for Long-Term 3D Culture and Insights into Late Recurrence. (2020) (13)
Predicting Ligand Binding Residues and Functional Sites Using Multipositional Correlations with Graph Theoretic Clustering and Kernel CCA (2012) (13)
Text Mining of Protein Phosphorylation Information Using a Generalizable Rule-Based Approach (2013) (13)
TGF-beta signaling proteins and the Protein Ontology (2009) (13)
Evolutionary Model Selection and Parameter Estimation for Protein-Protein Interaction Network Based on Differential Evolution Algorithm (2015) (12)
eFIP: a tool for mining functional impact of phosphorylation from literature. (2011) (12)
Recent advances in biocuration: Meeting Report from the fifth International Biocuration Conference (2012) (12)
UD_GU_BioTM at TREC 2017: Precision Medicine Track (2017) (12)
Automatic gene annotation using GO terms from cellular component domain (2018) (12)
Protein ontology on the semantic web for knowledge discovery (2020) (12)
COVID-19 Knowledge Graph from semantic integration of biomedical literature and databases (2021) (12)
Robust segmentation of biomedical figures for image-based document retrieval (2012) (11)
Integrative Computational and Experimental Approaches to Establish a Post-Myocardial Infarction Knowledge Map (2014) (11)
Evolutionary analysis and interaction prediction for protein-protein interaction network in geometric space (2017) (11)
An integrated approach for analyzing clinical genomic variant data from next-generation sequencing. (2015) (10)
Completing sparse and disconnected protein-protein network by deep learning (2018) (10)
Bioinformatics Knowledge Map for Analysis of Beta-Catenin Function in Cancer (2015) (10)
Artificial neural system for gene classification using a domain database (1990) (10)
iSimp in BioC standard format: enhancing the interoperability of a sentence simplification system (2014) (10)
DEXTER: Disease-Expression Relation Extraction from Text (2018) (10)
The PIR integrated protein databases and data retrieval system (2004) (10)
Protein classification using a neural network database system (1991) (10)
BioTagger: A Biological Entity Tagging System (2004) (9)
Pattern Discovery for Wide-Window Open Information Extraction in Biomedical Literature (2018) (9)
Elevated FGF 21 secretion , PGC-1 a and ketogenic enzyme expression are hallmarks of iron – sulfur cluster depletion in human skeletal muscle (2013) (9)
Use of the Protein Ontology for Multi-Faceted Analysis of Biological Processes: A Case Study of the Spindle Checkpoint (2013) (9)
Structure-guided rule-based annotation of protein functional sites in UniProt knowledgebase. (2011) (9)
BioC-compatible full-text passage detection for protein–protein interactions using extended dependency graph (2016) (9)
Counter-Propagation Neural Networks for Molecular Sequence Classification: Supervised LVQ and Dynamic Node Allocation (2004) (8)
Characterization of metabolic responses, genetic variations, and microsatellite instability in ammonia-stressed CHO cells grown in fed-batch cultures (2021) (7)
A Study of Text Categorization for Model Organism Databases (2004) (7)
A comparison study of biomedical short form definition detection algorithms (2006) (7)
A FAMILY CLASSIFICATION APPROACH TO FUNCTIONAL ANNOTATION OF PROTEINS (2004) (7)
PENNER: Pattern-enhanced Nested Named Entity Recognition in Biomedical Literature (2018) (6)
Update on human genome completion and annotations: Protein information resource (2004) (6)
Substorms During Prolonged Northward Interplanetary Magnetic Field (2004) (6)
Protein-protein interaction prediction based on multiple kernels and partial network with linear programming (2016) (6)
Protein-centric data integration for functional analysis of comparative proteomics data. (2011) (6)
Using an artificial neural system to determine the knowledge based of an expert system (1990) (6)
Development of Bioinformatics Pipeline for Analyzing Clinical Pediatric NGS Data (2015) (6)
The Protein Information Resource for Functional Genomics and Proteomics (2003) (6)
Protein-protein interaction network inference from multiple kernels with optimization based on random walk by linear programming (2015) (5)
Analysis of Protein Phosphorylation and Its Functional Impact on Protein-Protein Interactions via Text Mining of the Scientific Literature. (2017) (5)
eGenPub, a text mining system for extending computationally mapped bibliography for UniProt Knowledgebase by capturing centrality (2017) (5)
RESTful API for iPTMnet: An Integrated Resource for Protein Post-translational Modification Network Discovery (2018) (5)
PIRSitePredict for protein functional site prediction using position-specific rules (2019) (5)
Predicting ligand binding residues using multi-positional correlations and kernel canonical correlation analysis (2010) (5)
Building a classifier for identifying sentences pertaining to disease-drug relationships in tardive dyskinesia (2012) (4)
Neural networks for molecular sequence database management (1991) (4)
Protein name tagging guidelines: lessons learned: Conference Papers (2005) (4)
ngsShoRT: A Software for Pre-processing Illumina Short Read Sequences for De Novo Genome Assembly (2013) (4)
Studying Biocuration Workflows (2009) (4)
Pathway curation: Application of text-mining tools eGIFT and RLIMS-P (2012) (4)
Knowledge Representation of Protein PTMs and Complexes in the Protein Ontology: Application to Multi-Faceted Disease Analysis (2014) (3)
CANS: an interactive neural network system for CRAY supercomputers (1992) (3)
Neural Networks for Full-Scale Protein Sequence Classification: Sequence Encoding with Singular Value Decomposition (2004) (3)
Mapping Gene/Protein Names in Free Text to Biomedical Databases (2007) (3)
Computational clustering for viral reference proteomes (2016) (3)
RLIMS-P : Literature-based curation of protein phosphorylation information (2013) (3)
Linking Biomedical Language, Information and Knowledge - Session Introduction (2003) (3)
Gene Family Identification Network Design for Protein Sequence Analysis (1999) (3)
iPTMnet: An integrated resource for protein post-translational modification network analysis (2016) (3)
Information Extraction of Protein Phosphorylation from Biomedical Literature (2009) (2)
PPInfer : a Bioconductor package for inferring functionally related proteins using protein interaction networks (2017) (2)
Two-stage story segmentation and detection on broadcast news using genetic algorithm (2003) (2)
WIND Magnetic Clouds for Years 1995 - 2003 : A Summary of Model-Fitted Parameters (2004) (2)
Prediction of Protein-protein Interaction Sites at Interface Topology Level (2013) (2)
Sa1027 – Beyond Availability: Evaluating Acceptability of High Resolution Microendoscopy Among Patients and Providers for Detection of Esophageal Squamous Cell Neoplasia (2019) (2)
iProLINK: A Framework for Linking Text Mining with Ontology and Systems Biology (2008) (2)
Predicting functional sites in biological sequences using canonical correlation analysis (2009) (2)
An Image-Text Approach for Extracting Experimental Evidence of Protein-Protein Interactions in the Biomedical Literature (2013) (2)
Classification artificial neural systems for genome research (1992) (2)
Global analysis of switchgrass (Panicum virgatum L.) transcriptomes in response to interactive effects of drought and heat stresses (2022) (2)
Predicting nsSNPs that Disrupt Protein-Protein Interactions Using Docking (2017) (2)
Correction: Toll-Like Receptor Signaling in Vertebrates: Testing the Integration of Protein, Complex, and Pathway Data in the Protein Ontology Framework (2015) (2)
Enhancing the Interoperability of iSimp by Using the BioC Format (2013) (2)
Original article Text mining for the biocuration workflow (2012) (2)
Abstract 4859: Development of a cancer transcriptome analysis toolkit: identification of gene fusions in chronic lymphocytic leukemia (2015) (2)
Global proteome and phosphoproteome alterations in third generation EGFR TKI resistance reveal drug targets to circumvent resistance (2020) (2)
Vector velocity profiles of the solar wind within expanding magnetic clouds at 1 AU: Some surprises (2002) (1)
Toll-Like Receptor Signaling in Vertebrates: Testing the Integration of Protein, Complex, and Pathway Data in the Protein Ontology Framework (2015) (1)
Functional Annotation of Protein Isoforms and Modified Forms (2008) (1)
Biocuration Workflow Catalogue (2009) (1)
2009 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2009: Preface (2009) (1)
Motif neural network design for large-scale protein family identification (1997) (1)
The PIR SuperFamily (PIRSF) classification system (2005) (1)
Extended dependency graph for BioC-compatible protein-protein interaction ( PPI ) passage detection in full-text articles (2015) (1)
Enhancing interacting residue prediction with integrated contact matrix prediction in protein-protein interaction (2016) (1)
Literature Data Mining for Biology - Session Introduction (2002) (1)
Docking features for predicting binding loss due to protein mutation (2014) (1)
Protein Classification Artificial Neural System: A filter program for database search (1993) (1)
Near Real Time Prediction of Magnetic Storm Intensity and Timing from Measurements of North to-South Interplanetary Magnetic Clouds (2003) (1)
Bioinformatic Databases (2008) (1)
2012 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2012, Philadelphia, PA, USA, October 4-7, 2012 (2012) (1)
A generalizable NLP framework for fast development of pattern-based biomedical relation extraction systems (2014) (1)
The 2-D Curvature of Large Angle Interplanetary MHD Discontinuity Surfaces: IMP-8 and WIND Observations (2002) (1)
Literature Data Mining for Biology (2001) (1)
Data and text mining Substring selection for biomedical document classification (2006) (1)
Chapter 10 – Protein bioinformatics (2008) (1)
Protein Ontology (PRO) for integration of knowledge on proteins, complexes and PTMs (2012) (0)
Ammonia stress triggers genome instability in CHO cells (2020) (0)
Family identification system for electron transfer proteins Using a motif neural network design (1997) (0)
Integrative bioinformatics for knowledge discovery of PTM networks (2012) (0)
Building a text mining pipeline to retrieve literature to study stress response in Arabidopsis (2020) (0)
Co-expression based regulatory network for lens development (2015) (0)
Integration of temporal lens gene expression datasets to expand the gene discovery tool iSyTE (2014) (0)
Back-propagation andcounter-propagat ion neural networks forphylogenetic classification ofribosomal RNA sequences (1994) (0)
Breast Cancer Dormancy: Understanding ER+ Breast Cancer Dormancy Using Bioinspired Synthetic Matrices for Long‐Term 3D Culture and Insights into Late Recurrence (Adv. Biosys. 9/2020) (2020) (0)
Scalable Text Mining Assisted Curation of PTM Proteoforms in the Protein Ontology (2016) (0)
Classification-driven and structure-assisted rule based annotation of protein function (2004) (0)
DDI2PPI: an integrated web server for protein-protein interaction and residue contact matrix predictions (2014) (0)
Transcriptional profiling of liver during the critical embryo-to-hatchling transition period in the chicken (Gallus gallus) (2018) (0)
Microevolutionary dynamics of eccDNA in Chinese hamster ovary cells grown in fed-batch cultures under control and lactate-stressed conditions (2023) (0)
A figure-based system for extracting, archiving, and retrieving protein-protein interactions (ppis) from biomedical literature (2013) (0)
RESTful API for iPTMnet: a resource for protein post-translational modification network discovery (2020) (0)
computational complexity of the introduced method is much less than the algorithms in which the entire sequences are used for classification. (2003) (0)
iPTMnet RESTful API for Post-translational Modification Network Analysis. (2022) (0)
Annotation of Protein Sequences (2005) (0)
A knowledge graph representation learning approach to predict novel kinase–substrate interactions (2022) (0)
Ionospheric Responses to Magnetic Cavities during Northward IMF Conditions (2001) (0)
1-1-2018 DEXTER : Disease-Expression Relation Extraction from Text (2019) (0)
Mining Protein Interactions of Phosphorylated Proteins from the Literature using eFIP (2012) (0)
PTM Knowledge Networks and LINCS Multi-Omics Data for Kinase Inhibitor Drug-Analytics in Lung Cancer (2018) (0)
Text mining of CHO bioprocess bibliome: Topic modeling and document classification (2022) (0)
Accomplishments and Challenges inLiterature Data Mining for BiologyLynette HirschmanThe (2008) (0)
Completing sparse and disconnected protein-protein network by deep learning (2018) (0)
Global analysis of switchgrass (Panicum virgatum L.) transcriptomes in response to interactive effects of drought and heat stresses (2022) (0)
Dynamically Generating a Protein Entity Dictionary Using Online Resources (2005) (0)
Protein-Centric Connection of Biomedical Knowledge: Protein Ontology (PRO) Research and Annotation Tools (2011) (0)
The PIR for Functional Genomics and Proteomics (2003) (0)
CLIPS: A tool for corn disease diagnostic system and an aid to neural network for automated knowledge acquisition (1990) (0)
Global heliospheric disturbances near 1 AU caused by the launch of solar transients on January 1 and September 23, 1978. (2003) (0)
Predicting protein-protein interactions and their interacting interfaces with statistical learning techniques (2012) (0)
FGF-21 secretion and ketogenic enzyme expression are hallmarks of chronic energy deficiency in human skeletal muscles depleted of iron sulfur clusters (2013) (0)
Mining impact of protein modifications on protein-protein interactions from literature (2009) (0)
Efficient and Accurate Entity Recognition for Biomedical Text (2017) (0)
Microsatellite instability as a tool to diagnose genome instability in CHO cell culture (2019) (0)
Original Text mining for the biocuration workflow (2012) (0)
Cloud-based Semantic Integration and Knowledge Discovery Systems in Precision Medicine (2018) (0)
An Integrated Approach for Interpretation of Clinical NGS Genomic Variant Data (2014) (0)
BUILDING A PREDICTIVE MODELING SYSTEM FOR SENTENCE CLASSIFICATION : A CASE STUDY USING TARDIVE DYSKINESIA (2012) (0)
Extracting plant stress genes and functions from scientific literature to support annotation of switchgrass ( Panicum virgatum L .) genes (2021) (0)
Coordination between TGF-β cellular signaling and epigenetic regulation during epithelial to mesenchymal transition (2019) (0)
Accumulation and Binding of a Polysome-Associated-Protein in Maize Responding to Infection by Bipolaris maydis (1991) (0)
An Editorial Note on Journal of Clinical and Medical Genomics-2020 Successful Journey (2021) (0)
Information Flow and Data Integration of Databanks (2005) (0)
Aberrant iron homeostasis, oxidative fiber enrichment, and activation of ketogenesis in muscle tissue of ISCU Myopathy patients (2012) (0)
Protein ontology on the semantic web for knowledge discovery (2020) (0)
Proceedings - 2012 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2012: Preface (2012) (0)
An Editorial Note on Journal of Clinical and Medical Genomics (2020) (0)
Content mining at the Spanish National Cancer Research Centre : the BioCreative experiences (2015) (0)
Literature Mining of Pathogenesis-Related Proteins in Human Pathogens for Database Annotation (2009) (0)
SPARQL-Powered search engine and RESTful APIs for protein ontology (2019) (0)
Abstract 1308: Post translational crosstalk networks identify strategies to overcome EMT-mediated resistance to EGFR inhibitors (2018) (0)
Prediction of Catalytic Residues in Proteins Using a Consensus of Prediction (CoP) Approach (2010) (0)
Family Classification and Integrative Analysis for Protein Functional Annotation (2004) (0)
Functional annotation of proteoforms in the mouse genome database using the protein ontology (2017) (0)
Integrative annotation and knowledge discovery of kinase post-translational modifications and cancer-associated mutations through federated protein ontologies and resources (2018) (0)
Trinity CTAT: a community resource for de novo and reference-based RNA-Seq analysis (2016) (0)
Editorial Note on Clinical & Medical Genomics (2020) (0)
Protein Complex Mention Recognition with Web-Based Knowledge Learning (2018) (0)
Scalable Text Mining Assisted Curation of Post-Translationally Modified Proteoforms in the Protein Ontology. (2016) (0)
Hormone-Stimulated Steroidogenesis in MA-10 Mouse Tumor Leydig Cells Molecular Mechanisms Mediating the Effect of Mono-(2-Ethylhexyl) Phthalate on (2010) (0)
Chapter 16. iPTMnet: Integrative Bioinformatics for Studying PTM Networks (2017) (0)
miRiaD: A Text Mining Tool for Detecting Associations of microRNAs with Diseases (2016) (0)

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