Charles F. Aquadro
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Charles F. Aquadrobiology Degrees
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Evolutionary Biology
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Biology
Why Is Charles F. Aquadro Influential?
(Suggest an Edit or Addition)Charles F. Aquadro's Published Works
Number of citations in a given year to any of this author's works
Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- Evolution of genes and genomes on the Drosophila phylogeny (2007) (1992)
- Levels of naturally occurring DNA polymorphism correlate with recombination rates in D. melanogaster (1992) (917)
- Properties of statistical tests of neutrality for DNA polymorphism data. (1995) (649)
- Evolutionary EST analysis identifies rapidly evolving male reproductive proteins in Drosophila (2001) (493)
- Human mitochondrial DNA variation and evolution: analysis of nucleotide sequences from seven individuals. (1983) (454)
- Equilibrium distributions of microsatellite repeat length resulting from a balance between slippage events and point mutations. (1998) (447)
- Positive Darwinian selection drives the evolution of several female reproductive proteins in mammals (2001) (416)
- Rapid antigenic-type replacement and DNA sequence evolution of canine parvovirus (1991) (412)
- DNA "fingerprinting" reveals high levels of inbreeding in colonies of the eusocial naked mole-rat. (1990) (379)
- African and North American populations of Drosophila melanogaster are very different at the DNA level (1993) (325)
- Low mutation rates of microsatellite loci in Drosophila melanogaster (1997) (260)
- Mitochondrial DNA differentiation during the speciation process in Peromyscus. (1983) (257)
- Stepwise Modification of a Modular Enhancer Underlies Adaptation in a Drosophila Population (2009) (244)
- Sexual isolation in Drosophila melanogaster: a possible case of incipient speciation. (1995) (238)
- Distinguishing Between Selective Sweeps and Demography Using DNA Polymorphism Data (2005) (237)
- Mitochondrial DNA in the bark weevils: size, structure and heteroplasmy. (1989) (236)
- The mutation rates of di-, tri- and tetranucleotide repeats in Drosophila melanogaster. (1998) (234)
- Evolutionary Expressed Sequence Tag Analysis of Drosophila Female Reproductive Tracts Identifies Genes Subjected to Positive Selection (2004) (232)
- Nonneutral mitochondrial DNA variation in humans and chimpanzees. (1996) (218)
- DNA variability and recombination rates at X-linked loci in humans. (1998) (209)
- Improved hybridization conditions for DNA 'fingerprints' probed with M13. (1988) (202)
- Molecular population genetics of the alcohol dehydrogenase gene region of Drosophila melanogaster. (1986) (194)
- Excess of non-parental bands in offspring from known primate pedigrees assayed using RAPD PCR. (1992) (187)
- EXTENSIVE GENETIC VARIATION IN MITOCHONDRIAL DNA'S AMONG GEOGRAPHIC POPULATIONS OF THE DEER MOUSE, PEROMYSCUS MANICULATUS (1983) (173)
- Diversity and selection in sorghum: simultaneous analyses using simple sequence repeats (2005) (162)
- Canine host range and a specific epitope map along with variant sequences in the capsid protein gene of canine parvovirus and related feline, mink, and raccoon parvoviruses. (1988) (160)
- Cross-Species Comparison of Drosophila Male Accessory Gland Protein Genes (2005) (157)
- The genetic basis of adaptive pigmentation variation in Drosophila melanogaster (2007) (143)
- The rosy region of Drosophila melanogaster and Drosophila simulans. I. Contrasting levels of naturally occurring DNA restriction map variation and divergence. (1988) (142)
- Coevolution of Interacting Fertilization Proteins (2009) (134)
- Mitochondrial DNA variation among lake trout (Salvelinus namaycush) strains stocked into Lake Ontario (1993) (132)
- The distribution and frequency of microsatellite loci in Drosophila melanogaster (1998) (132)
- Selection, Recombination, and DNA Polymorphism in Drosophila (1994) (130)
- Molecular population genetics of the distal portion of the X chromosome in Drosophila: evidence for genetic hitchhiking of the yellow-achaete region. (1991) (130)
- Evolutionary genetics of birdsComparative molecular evolution in New World warblers and rodents (1980) (130)
- Comparative structural modeling and inference of conserved protein classes in Drosophila seminal fluid. (2004) (129)
- Evolutionary Rate Covariation Identifies New Members of a Protein Network Required for Drosophila melanogaster Female Post-Mating Responses (2014) (122)
- Mitochondrial DNA variation and the evolution of Robertsonian chromosomal races of house mice, Mus domesticus. (1994) (116)
- Nonneutral evolution at the mitochondrial NADH dehydrogenase subunit 3 gene in mice. (1994) (108)
- Rates of DNA sequence evolution are not sex-biased in Drosophila melanogaster and D. simulans. (1997) (101)
- Challenges of Detecting Directional Selection After a Bottleneck: Lessons From Sorghum bicolor (2006) (100)
- The importance of the Neutral Theory in 1968 and 50 years on: A response to Kern and Hahn 2018 (2018) (98)
- Genome-wide variation in the human and fruitfly: a comparison. (2001) (96)
- Microsatellite variation in Drosophila melanogaster and Drosophila simulans: a reciprocal test of the ascertainment bias hypothesis. (1998) (96)
- Nucleotide sequence of the Adh gene region of Drosophila pseudoobscura: evolutionary change and evidence for an ancient gene duplication. (1987) (94)
- Distribution and abundance of microsatellites in the yeast genome can Be explained by a balance between slippage events and point mutations. (2000) (93)
- On the Utility of Linkage Disequilibrium as a Statistic for Identifying Targets of Positive Selection in Nonequilibrium Populations (2007) (92)
- Evolutionary rate covariation reveals shared functionality and coexpression of genes. (2012) (92)
- Maximum likelihood estimation of ancestral codon usage bias parameters in Drosophila. (2006) (89)
- Microsatellite variation in colonizing and palearctic populations of Drosophila subobscura. (2001) (88)
- Approaches for identifying targets of positive selection. (2007) (88)
- Polymorphism in abalone fertilization proteins is consistent with the neutral evolution of the egg's receptor for lysin (VERL) and positive darwinian selection of sperm lysin. (2001) (86)
- A Nutrient-Driven tRNA Modification Alters Translational Fidelity and Genome-wide Protein Coding across an Animal Genus (2014) (85)
- Molecular evolution of inversions in Drosophila pseudoobscura: the amylase gene region. (1991) (85)
- Evolutionary Genetics of Birds II. Conservative Protein Evolution in North American Sparrows and Relatives (1980) (83)
- History and Structure of Sub-Saharan Populations of Drosophila melanogaster (2006) (82)
- Molecular variation at the vermilion locus in geographically diverse populations of Drosophila melanogaster and D. simulans. (1995) (82)
- Evolutionary inferences from DNA variation at the 6-phosphogluconate dehydrogenase locus in natural populations of drosophila: selection and geographic differentiation. (1994) (81)
- Why is the genome variable? Insights from Drosophila. (1992) (79)
- Genetic divergence between rodent species assessed by using two-dimensional electrophoresis. (1981) (77)
- Negative epistasis between natural variants of the Saccharomyces cerevisiae MLH1 and PMS1 genes results in a defect in mismatch repair. (2006) (77)
- Genetic variation and differentiation at microsatellite loci in Drosophila simulans. Evidence for founder effects in new world populations. (1998) (72)
- Microsatellite Mutation Models (2004) (71)
- Dynamics of microsatellite divergence under stepwise mutation and proportional slippage/point mutation models. (2001) (70)
- The evolutionary analysis of "orphans" from the Drosophila genome identifies rapidly diverging and incorrectly annotated genes. (2001) (69)
- Naturally occurring variation in the restriction map of the amy region of Drosophila melanogaster. (1988) (66)
- Finding of male-killing Spiroplasma infecting Drosophila melanogaster in Africa implies transatlantic migration of this endosymbiont (2006) (61)
- Patterns of mutation and selection at synonymous sites in Drosophila. (2007) (56)
- Evidence of amino acid diversity-enhancing selection within humans and among primates at the candidate sperm-receptor gene PKDREJ. (2007) (54)
- Equine dinucleotide repeat loci COR001-COR020. (1999) (54)
- DNA Variability and Divergence at the Notch Locus in Drosophila melanogaster and D. simulans: A Case of Accelerated Synonymous Site Divergence (2004) (53)
- Evidence for positive selection on Drosophila melanogaster seminal fluid protease homologs. (2008) (52)
- Microsatellite variation in populations of Drosophila pseudoobscura and Drosophila persimilis. (2000) (51)
- Courtship songs ofDrosophila pseudoobscuraandD.persimilis: analysis of variation (1998) (50)
- DNA sequence evolution of the amylase multigene family in Drosophila pseudoobscura. (1990) (50)
- Fitting background-selection predictions to levels of nucleotide variation and divergence along the human autosomes. (2005) (47)
- High density of long dinucleotide microsatellites in Drosophila subobscura. (2000) (47)
- DNA sequence variation and the recombinational landscape in Drosophila pseudoobscura: a study of the second chromosome. (1999) (47)
- Multiple Signatures of Positive Selection Downstream of Notch on the X Chromosome in Drosophila melanogaster (2005) (46)
- Restriction-map variation in natural populations of Drosophila melanogaster: white-locus region. (1987) (46)
- Restriction-map variation in the alcohol dehydrogenase region of Drosophila pseudoobscura. (1987) (46)
- A novel method to detect proteins evolving at correlated rates: identifying new functional relationships between coevolving proteins. (2010) (46)
- Sequence evolution within populations under multiple types of mutation. (1986) (46)
- Restriction-map variation in the Notch region of Drosophila melanogaster. (1988) (45)
- Mitochondrial DNA in the bark weevils: phylogeny and evolution in the Pissodes strobi species group (Coleoptera: Curculionidae). (1994) (45)
- A Scan of Molecular Variation Leads to the Narrow Localization of a Selective Sweep Affecting Both Afrotropical and Cosmopolitan Populations of Drosophila melanogaster (2006) (44)
- An analysis of the dynamics of mammalian mitochondrial DNA sequence evolution. (1984) (43)
- Incompatibilities Involving Yeast Mismatch Repair Genes: A Role for Genetic Modifiers and Implications for Disease Penetrance and Variation in Genomic Mutation Rates (2008) (42)
- DNA fingerprinting analysis of parent-offspring conflict in a bee. (1994) (42)
- Salivary Amylase Variation in Peromyscus: Use in Species Identification (1980) (41)
- Mutation and evolution of microsatellites in Drosophila melanogaster (2004) (41)
- Insights into the evolutionary process from patterns of DNA sequence variability. (1997) (40)
- Evolution at the tip and base of the X chromosome in an African population of Drosophila melanogaster. (1995) (39)
- Large number of replacement polymorphisms in rapidly evolving genes of Drosophila. Implications for genome-wide surveys of DNA polymorphism. (1999) (39)
- Selection on X-linked genes during speciation in the Drosophila athabasca complex. (1996) (39)
- High nucleotide sequence variation in a region of low recombination in Drosophila simulans is consistent with the background selection model. (1996) (38)
- Strong evidence for lineage and sequence specificity of substitution rates and patterns in Drosophila. (2009) (38)
- Patterns of naturally occurring restriction map variation, dopa decarboxylase activity variation and linkage disequilibrium in the Ddc gene region of Drosophila melanogaster. (1992) (38)
- EVOLUTIONARY GENETICS OF BIRDS. VI. A REEXAMINATION OF PROTEIN DIVERGENCE USING VARIED ELECTROPHORETIC CONDITIONS (1982) (34)
- Recurrent positive selection at bgcn, a key determinant of germ line differentiation, does not appear to be driven by simple coevolution with its partner protein bam. (2007) (33)
- Phylogenetic incongruence in the Drosophila melanogaster species group. (2007) (33)
- Gene flow and gene flux shape evolutionary patterns of variation in Drosophila subobscura (2013) (32)
- Hatchery Origins of Naturally Produced Lake Trout Fry Captured in Lake Ontario: Temporal and Spatial Variability Based on Allozyme and Mitochondrial DNA Data (1994) (32)
- Fine-Scale Heterogeneity in Crossover Rate in the garnet-scalloped Region of the Drosophila melanogaster X Chromosome (2013) (31)
- Directional evolution of size coupled with ascertainment bias for variation in Drosophila microsatellites. (2003) (31)
- Estimation of Fine-Scale Recombination Intensity Variation in the white–echinus Interval of D. melanogaster (2009) (30)
- Mutation, selection and the future of human evolution. (2006) (29)
- Evolutionary Rate Covariation in Meiotic Proteins Results from Fluctuating Evolutionary Pressure in Yeasts and Mammals (2013) (28)
- Brief communication: ancient DNA prospects from Sri Lankan highland dry caves support an emerging global pattern. (2003) (28)
- Polymorphism and divergence at the 5' flanking region of the sex-determining locus, Sry, in mice. (1994) (28)
- Positive Darwinian selection in the evolution of mammalian female reproductive proteins (2001) (28)
- Contrasting patterns of nucleotide sequence variation at the glucose dehydrogenase (Gld) locus in different populations of Drosophila melanogaster. (1997) (27)
- Equine dinucleotide repeat loci COR041-COR060. (1999) (26)
- Recommendations for improving statistical inference in population genomics (2021) (26)
- Population Genomics of Infectious and Integrated Wolbachia pipientis Genomes in Drosophila ananassae (2015) (26)
- Positive Darwinian Selection Promotes Heterogeneity Among Members of the Antifreeze Protein Multigene Family (2002) (26)
- DNA sequence variation and phylogenetic relationships among strains of Pseudomonas syringae pv. syringae inferred from restriction site maps and restriction fragment length polymorphism (1993) (26)
- Mitch – a rapidly evolving component of the Ndc80 kinetochore complex required for correct chromosome segregation in Drosophila (2007) (25)
- Patterns of Sequence Variability and Divergence at the diminutive Gene Region of Drosophila melanogaster: Complex Patterns Suggest an Ancestral Selective Sweep (2007) (25)
- The Drosophila bag of marbles Gene Interacts Genetically with Wolbachia and Shows Female-Specific Effects of Divergence (2015) (24)
- Nucleotide polymorphism in the Est6 promoter, which is widespread in derived populations of Drosophila melanogaster, changes the level of Esterase 6 expressed in the male ejaculatory duct. (2002) (24)
- The coevolutionary period of Wolbachia pipientis infecting Drosophila ananassae and its impact on the evolution of the host germline stem cell regulating genes. (2014) (23)
- Evidence for a Selective Sweep on Chromosome 1 of Cultivated Sorghum (2006) (23)
- A Genetic Incompatibility Accelerates Adaptation in Yeast (2015) (21)
- Field Identification of the Mice Peromyscus leucopus noveboracensis and P. maniculatus gracilis in Central New York (2003) (21)
- Inferences of Demography and Selection in an African Population of Drosophila melanogaster (2013) (21)
- Equine dinucleotide repeat loci COR061-COR080. (1999) (20)
- Noninvolvement of the long terminal repeat of transposable element 17.6 in insecticide resistance in Drosophila. (1993) (20)
- Molecular Population Genetics of Drosophila (1993) (19)
- Mismatch Repair Incompatibilities in Diverse Yeast Populations (2017) (19)
- Molecular evolution of the period gene in Drosophila athabasca. (1994) (19)
- An assessment of "hidden" heterogeneity within electromorphs at three enzyme loci in deer mice. (1982) (18)
- EVOLUTIONARY GENETICS OF BIRDS I . RELATIONSHIPS AMONG NORTH AMERICAN THRUSHES AND ALLIES (2003) (18)
- Urticaria following the sequential breathing of various inert gases at a constant ambient pressure of 7 ATA: a possible manifestation of gas-induced osmosis. (1971) (17)
- Equine dinucleotide repeat loci COR081-COR100. (1999) (17)
- Incompatibilities in Mismatch Repair Genes MLH1-PMS1 Contribute to a Wide Range of Mutation Rates in Human Isolates of Baker’s Yeast (2018) (16)
- Mitochondrial DNA variation among the Drosophila athabasca semispecies and Drosophila affinis. (1994) (16)
- EVIDENCE OF SUSCEPTIBILITY AND RESISTANCE TO CRYPTIC X‐LINKED MEIOTIC DRIVE IN NATURAL POPULATIONS OF DROSOPHILA MELANOGASTER (2005) (16)
- Inferring selection in partially sequenced regions. (2008) (16)
- Equine dinucleotide repeat loci COR021-COR040. (1999) (16)
- Adaptive Evolution of Genes Involved in the Regulation of Germline Stem Cells in Drosophila melanogaster and D. simulans (2015) (16)
- Temporally variable selection on proteolysis-related reproductive tract proteins in Drosophila. (2012) (14)
- Inversions and adaptation to the plant toxin ouabain shape DNA sequence variation within and between chromosomal inversions of Drosophila subobscura. (2016) (14)
- Increased variation in ADH enzyme activity in Drosophila mutation-accumulation experiment is not due to transposable elements at the Adh structural gene. (1990) (13)
- Restriction map and α-amylase activity variation among Drosophila mutation accumulation lines (1989) (12)
- Positively selected disease response orthologous gene sets in the cereals identified using Sorghum bicolor L. Moench expression profiles and comparative genomics. (2009) (11)
- Malate Dehydrogenase Isozymes Provide a Phylogenetic Marker for the Piciformes (Woodpeckers and Allies) (1987) (11)
- Locus-Specific Decoupling of Base Composition Evolution at Synonymous Sites and Introns along the Drosophila melanogaster and Drosophila sechellia Lineages (2009) (11)
- Recent and Long-Term Selection Across Synonymous Sites in Drosophila ananassae (2016) (10)
- Evolutionary genetics of birds. V. Genetic distances within Mimidae (mimic thrushes) and Vireonidae (vireos) (1982) (10)
- Baker's Yeast Clinical Isolates Provide a Model for How Pathogenic Yeasts Adapt to Stress. (2019) (10)
- Methyl chloride ( CH , Cl ) production in phytoplankton cultures (9)
- Evolutionary genetics of birds. III. Comparative molecular evolution in New World warblers (Parulidae) and rodents (Cricetinae) (1980) (9)
- Molecular Evolution of Drosophila Germline Stem Cell and Neural Stem Cell Regulating Genes (2015) (8)
- Correction: A Nutrient-Driven tRNA Modification Alters Translational Fidelity and Genome-wide Protein Coding across an Animal Genus (2015) (5)
- Colonization of Suitable Habitat by Peromyscus leucopus in Coastal Maine (1980) (5)
- Examination and selection of personnel for work in underwater environment. (1965) (4)
- Regional variation in fruitflies (1994) (4)
- The Problem of Inferring Selection and Evolutionary History from Molecular Data (2000) (4)
- Diverse wMel variants of Wolbachia pipientis differentially rescue fertility and cytological defects of the bag of marbles partial loss of function mutation in Drosophila melanogaster (2021) (3)
- Stability of Allozyme and Mitochondrial DNA Markers among Three Year-Classes of Lake Trout Propagated from Seneca Lake, New York (1994) (3)
- Cut locus variation in natural populations of Drosophila. (1994) (2)
- Molecular population genetics of Sex-lethal (Sxl) in the Drosophila melanogaster species group: a locus that genetically interacts with Wolbachia pipientis in Drosophila melanogaster (2021) (2)
- Functional Divergence of the bag-of-marbles Gene in the Drosophila melanogaster Species Group (2021) (2)
- The persistence of low-titer Wolbachia pipientis infection in antibiotic-treated Drosophila (2020) (1)
- POR8: MINIMAL STANDARDS FOR THE VALIDATION OF QUALITY OF LIFE INSTRUMENTS USED IN CLINICAL TRIALS (1999) (1)
- Stability of Allozyme and Mitochondria! DNA Markers among Three Year-Classes of Lake Trout Propagated from (1994) (1)
- V.1. Molecular Evolution (2013) (1)
- Rapid mutations in mice? (1985) (1)
- Recent and Long-Term Selection Across Synonymous Sites in Drosophila ananassae (2016) (1)
- Author ' s personal copy Approaches for identifying targets of positive selection (2007) (1)
- REGIONAL VARIATION IN FRUITFLIES. AUTHOR'S REPLY (1994) (0)
- Cryptitis with pinworm infestation. (1954) (0)
- Evolutionary Biology (1982) (0)
- Mitochondria DNA Variation among Lake Trout namaycush Strains Stocked into Lake On (1993) (0)
- Erratum: Field Identification of the Mice Peromyscus leucopus noveboracensis and P. maniculatus gracilis in Central New York. (2003) 117(2): 184-189. (2004) (0)
- coexpression of genes Evolutionary rate covariation reveals shared functionality and Material Supplemental (2012) (0)
- Recurrent positive selection at Bgcn, a key determinant of germline differentiation, does not appear to be driven by simple co-evolution with its partner protein Bam Submitted as a Research Article (2006) (0)
- Molecular evolution: macromolecular sequences in systematics and evolutionary biology. (1983) (0)
- Restriction map and alpha-amylase activity variation among Drosophila mutation accumulation lines. (1989) (0)
- Hour Talks Chip Aquadro (0)
- Locus specific decoupling of base composition evolution at synonymous sites and introns along the Drosophila melanogaster and D. sechellia lineages Submitted as a Research Article (2009) (0)
- Cornell University Life Sciences Core Laboratories Center. (2011) (0)
- Wolbachia rescue of several Drosophila melanogaster bag of marbles protein coding mutants (2023) (0)
- Molecular population genetics of Sex-lethal (Sxl) in the D. melanogaster species group - a locus that genetically interacts with Wolbachia pipientis in Drosophila melanogaster (2021) (0)
- Locus specific decoupling of base composition evolution at synonymous sites and introns along the Drosophila melanogaster and D. sechellia lineages Submitted as a Research Article (2009) (0)
- ~~t D~cussion and development (1992) (0)
- Reviewers of Manuscripts, 1984 (1985) (0)
- A model of functionally buffered deleterious mutations can lead to signatures of positive selection (2022) (0)
- [On the physiological limitations of the use of oxygen-helium respiratory mixture for deep diving and prolonged sojourns under pressure]. (1967) (0)
- [Animal experiments with prolonged stay in oxygen-helium at 41 to 58 bar]. (1967) (0)
- Properties of Statistical Tests of the Neutral Model in Molecular Evolution (1995) (0)
- A POW'S STORY (2012) (0)
- EVIDENCE OF SUSCEPTIBILITY AND RESISTANCE TO CRYPTIC X-LINKED MEIOTIC DRIVE IN NATURAL POPULATIONS OF DROSOPHILA MELANOGASTER (2005) (0)
- Analysis of Selection Patterns in Germline Stem Cell Genes (Stonewall, Otefin) in Drosophila pseudoobscura (2013) (0)
- Genetic variation among w Mel strains of Wolbachia pipientis differentially 1 rescues a bag of marbles partial loss of function mutant in Drosophila 2 melanogaster 3 4 (2021) (0)
- AMERICAN THRUSHES AND ALLIES (1980) (0)
- Cornell University DNA Sequencing and Genotyping Facility. (2010) (0)
- Mitochondrial DNA and Evolution in Peromyscus: A Preliminary Report (1982) (0)
- Time Noted at End of Abstract All Talks Will Be In Warren 151 Underlined Author is Presenter Identification of Possible Erythritol Metabolizing Enzymes (2016) (0)
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