Charlotte Deane
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Professor of Structural Bioinformatics
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Why Is Charlotte Deane Influential?
(Suggest an Edit or Addition)According to Wikipedia, Charlotte Mary Deane is an English Professor of Structural Bioinformatics and the former Head of the Department of Statistics at the University of Oxford. Early life and education Charlotte Deane was born in May 1975. She completed her undergraduate education at University College, Oxford studying chemistry, completing her final year project in Graham Richards' group. She then went to the University of Cambridge to study structural bioinformatics supervised by Tom Blundell. In 2000 she published her thesis entitled "Protein structure prediction: amino acid propensities and comparative modelling".
Charlotte Deane's Published Works
Number of citations in a given year to any of this author's works
Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- Protein Interactions (2002) (584)
- HOMSTRAD: A database of protein structure alignments for homologous families (1998) (540)
- JOY: protein sequence-structure representation and analysis (1998) (408)
- SAbDab: the structural antibody database (2013) (290)
- Reduced amounts and abnormal forms of phospholipase C zeta (PLCzeta) in spermatozoa from infertile men. (2009) (248)
- CoV-AbDab: the Coronavirus Antibody Database (2020) (175)
- ANARCI: antigen receptor numbering and receptor classification (2015) (163)
- Synonymous codon usage influences the local protein structure observed (2010) (160)
- Freely Available Conformer Generation Methods: How Good Are They? (2012) (156)
- Five computational developability guidelines for therapeutic antibody profiling (2019) (155)
- FREAD revisited: Accurate loop structure prediction using a database search algorithm (2010) (147)
- A multi-crystal method for extracting obscured crystallographic states from conventionally uninterpretable electron density (2017) (145)
- CODA: A combined algorithm for predicting the structurally variable regions of protein models (2001) (143)
- Avoiding False Positive Conclusions in Molecular Simulation: The Importance of Replicas. (2018) (142)
- ABodyBuilder: Automated antibody structure prediction with data–driven accuracy estimation (2016) (140)
- Revisiting Date and Party Hubs: Novel Approaches to Role Assignment in Protein Interaction Networks (2009) (138)
- A Microtubule Interactome: Complexes with Roles in Cell Cycle and Mitosis (2008) (114)
- SAbPred: a structure-based antibody prediction server (2016) (110)
- Observed Antibody Space: A Resource for Data Mining Next-Generation Sequencing of Antibody Repertoires (2018) (109)
- The function of communities in protein interaction networks at multiple scales (2009) (105)
- Progress and challenges in predicting protein interfaces (2015) (105)
- Rapid, Precise, and Reproducible Prediction of Peptide-MHC Binding Affinities from Molecular Dynamics That Correlate Well with Experiment. (2015) (104)
- A maternally inherited autosomal point mutation in human phospholipase C zeta (PLCζ) leads to male infertility. (2012) (103)
- Improving B-cell epitope prediction and its application to global antibody-antigen docking (2014) (102)
- MEDELLER: homology-based coordinate generation for membrane proteins (2010) (96)
- Solution Structure and Dynamics of a Prototypical Chordin-like Cysteine-rich Repeat (von Willebrand Factor Type C Module) from Collagen IIA* (2004) (95)
- Carbonyl-carbonyl interactions stabilize the partially allowed Ramachandran conformations of asparagine and aspartic acid. (1999) (95)
- Association between a common immunoglobulin heavy chain allele and rheumatic heart disease risk in Oceania (2017) (90)
- ABangle: characterising the VH-VL orientation in antibodies. (2013) (89)
- Deep Generative Models for 3D Linker Design (2020) (86)
- Deep Sequencing of B Cell Receptor Repertoires From COVID-19 Patients Reveals Strong Convergent Immune Signatures (2020) (85)
- Protein protein interactions, evolutionary rate, abundance and age (2006) (85)
- Deciphering chemotaxis pathways using cross species comparisons (2010) (79)
- The prospects of quantum computing in computational molecular biology (2020) (75)
- Protein Family-Specific Models Using Deep Neural Networks and Transfer Learning Improve Virtual Screening and Highlight the Need for More Data (2018) (75)
- Antibody i-Patch prediction of the antibody binding site improves rigid local antibody-antigen docking. (2013) (72)
- Type II Inhibitors Targeting CDK2. (2015) (70)
- How old is your fold? (2005) (66)
- A novel exhaustive search algorithm for predicting the conformation of polypeptide segments in proteins (2000) (65)
- The H3 loop of antibodies shows unique structural characteristics (2017) (64)
- Helix kinks are equally prevalent in soluble and membrane proteins (2014) (63)
- Thera-SAbDab: the Therapeutic Structural Antibody Database (2019) (57)
- Learning from the ligand: using ligand-based features to improve binding affinity prediction (2019) (57)
- Predicting protein-protein interactions in the context of protein evolution. (2010) (52)
- Alignment-free protein interaction network comparison (2014) (50)
- Ten Simple Rules for Effective Computational Research (2014) (47)
- Ten Simple Rules for a Successful Cross-Disciplinary Collaboration (2015) (43)
- Functionally guided alignment of protein interaction networks for module detection (2009) (43)
- STCRDab: the structural T-cell receptor database (2017) (43)
- Browsing the SLoop database of structurally classified loops connecting elements of protein secondary structure (2000) (43)
- Predicting antibody complementarity determining region structures without classification. (2011) (43)
- Current status and future challenges in T-cell receptor/peptide/MHC molecular dynamics simulations (2015) (43)
- Observed Antibody Space: A diverse database of cleaned, annotated, and translated unpaired and paired antibody sequences (2021) (42)
- An iterative structure‐assisted approach to sequence alignment and comparative modeling (1999) (42)
- Proteomic Analysis of Microtubule-associated Proteins during Macrophage Activation* (2009) (42)
- Prediction of VH–VL domain orientation for antibody variable domain modeling (2015) (41)
- Identifying and quantifying radiation damage at the atomic level (2015) (41)
- Improved protein loop prediction from sequence alone. (2001) (40)
- Sphinx: merging knowledge‐based and ab initio approaches to improve protein loop prediction (2017) (39)
- Sequence‐structure homology recognition by iterative alignment refinement and comparative modeling (2001) (38)
- Length-independent structural similarities enrich the antibody CDR canonical class model (2016) (38)
- Predicting and Validating Protein Interactions Using Network Structure (2008) (38)
- What Evidence Is There for the Homology of Protein-Protein Interactions? (2012) (37)
- Memoir: template-based structure prediction for membrane proteins (2013) (37)
- How B-Cell Receptor Repertoire Sequencing Can Be Enriched with Structural Antibody Data (2017) (37)
- Large Scale Characterization of the LC13 TCR and HLA-B8 Structural Landscape in Reaction to 172 Altered Peptide Ligands: A Molecular Dynamics Simulation Study (2014) (36)
- Fold usage on genomes and protein fold evolution (2005) (35)
- The Caenorhabditis elegans protein SAS-5 forms large oligomeric assemblies critical for centriole formation (2015) (35)
- Cotranslational protein folding - fact or fiction? (2007) (35)
- Antibody H3 Structure Prediction (2017) (35)
- Building a Better Fragment Library for De Novo Protein Structure Prediction (2015) (34)
- The role and predicted propensity of conserved proline residues in the 5-HT3 receptor. (2001) (33)
- An assessment of the uses of homologous interactions (2008) (31)
- DLAB: deep learning methods for structure-based virtual screening of antibodies (2021) (31)
- iMembrane: homology-based membrane-insertion of proteins (2009) (29)
- How threshold behaviour affects the use of subgraphs for network comparison (2010) (29)
- Modelling sequential protein folding under kinetic control (2006) (29)
- Exploring Fold Space Preferences of New-born and Ancient Protein Superfamilies (2013) (28)
- Producing High-Accuracy Lattice Models from Protein Atomic Coordinates Including Side Chains (2012) (28)
- Examining Variable Domain Orientations in Antigen Receptors Gives Insight into TCR-Like Antibody Design (2014) (28)
- Structurally Mapping Antibody Repertoires (2018) (28)
- i‐Patch: Interprotein contact prediction using local network information (2010) (26)
- Comparing co-evolution methods and their application to template-free protein structure prediction (2016) (26)
- How repertoire data are changing antibody science (2020) (25)
- Maturation of the Human Immunoglobulin Heavy Chain Repertoire With Age (2020) (25)
- Humanization of antibodies using a machine learning approach on large-scale repertoire data (2021) (25)
- Data Set Augmentation Allows Deep Learning-Based Virtual Screening to Better Generalize to Unseen Target Classes and Highlight Important Binding Interactions (2020) (25)
- Environment specific substitution tables improve membrane protein alignment (2011) (24)
- AbLang: an antibody language model for completing antibody sequences (2022) (24)
- Identifying networks with common organizational principles (2017) (23)
- Directionality in protein fold prediction (2010) (23)
- Ab-Ligity: identifying sequence-dissimilar antibodies that bind to the same epitope (2020) (23)
- MP-T: improving membrane protein alignment for structure prediction (2013) (22)
- Looking for therapeutic antibodies in next-generation sequencing repositories (2019) (22)
- T-Cell Receptor Binding Affects the Dynamics of the Peptide/MHC-I Complex (2016) (22)
- Co-evolution techniques are reshaping the way we do structural bioinformatics (2017) (21)
- SCORE: predicting the core of protein models (2001) (21)
- ABlooper: fast accurate antibody CDR loop structure prediction with accuracy estimation (2021) (21)
- Structural diversity of B-cell receptor repertoires along the B-cell differentiation axis in humans and mice (2019) (21)
- Cross-linking mass spectrometry identifies new interfaces of Augmin required to localise the γ-tubulin ring complex to the mitotic spindle (2017) (20)
- Gro2mat: A package to efficiently read gromacs output in MATLAB (2014) (20)
- The imprint of codons on protein structure (2011) (20)
- A computational method for immune repertoire mining that identifies novel binders from different clonotypes, demonstrated by identifying anti-pertussis toxoid antibodies (2020) (20)
- SCALOP: sequence-based antibody canonical loop structure annotation (2018) (20)
- Exploring peptide/MHC detachment processes using hierarchical natural move Monte Carlo (2015) (19)
- Epitope profiling using computational structural modelling demonstrated on coronavirus-binding antibodies (2021) (19)
- Protein structure prediction begins well but ends badly (2010) (19)
- Comparative Analysis of the CDR Loops of Antigen Receptors (2019) (19)
- Predicting loop conformational ensembles (2018) (18)
- The contribution of major histocompatibility complex contacts to the affinity and kinetics of T cell receptor binding (2016) (18)
- Variable Regions of Antibodies and T-Cell Receptors May Not Be Sufficient in Molecular Simulations Investigating Binding. (2017) (18)
- Deep generative design with 3D pharmacophoric constraints (2021) (18)
- Partial-occupancy binders identified by the Pan-Dataset Density Analysis method offer new chemical opportunities and reveal cryptic binding sites (2017) (18)
- Measuring rank robustness in scored protein interaction networks (2018) (18)
- Examining the Conservation of Kinks in Alpha Helices (2016) (18)
- Comparison of large networks with sub-sampling strategies (2016) (17)
- Misato Controls Mitotic Microtubule Generation by Stabilizing the Tubulin Chaperone Protein-1 Complex (2015) (17)
- Current advances in biopharmaceutical informatics: guidelines, impact and challenges in the computational developability assessment of antibody therapeutics (2022) (17)
- A structural model of the human thrombopoietin receptor complex. (1997) (17)
- Generating property-matched decoy molecules using deep learning (2020) (16)
- Antibody side chain conformations are position‐dependent (2018) (16)
- Public Baseline and shared response structures support the theory of antibody repertoire functional commonality (2021) (15)
- Sequential search leads to faster, more efficient fragment-based de novo protein structure prediction (2017) (15)
- Signatures of co-translational folding. (2011) (15)
- Functional module detection through integration of single-cell RNA sequencing data with protein–protein interaction networks (2019) (15)
- Computational Tools for Aiding Rational Antibody Design. (2017) (14)
- Current structure predictors are not learning the physics of protein folding (2022) (14)
- SAbDab in the age of biotherapeutics: updates including SAbDab-nano, the nanobody structure tracker (2021) (14)
- Membranome 3.0: Database of single‐pass membrane proteins with AlphaFold models (2022) (13)
- Structural Bridges through Fold Space (2015) (13)
- How long is a piece of loop? (2013) (13)
- Sphinx: merging knowledge-based and ab initio approaches to improve protein loop prediction (2017) (13)
- Antibody–antigen complex modelling in the era of immunoglobulin repertoire sequencing (2019) (13)
- The Importance of Age and High Degree, in Protein-Protein Interaction Networks (2012) (12)
- Evolutionary analysis reveals low coverage as the major challenge for protein interaction network alignment. (2010) (12)
- Electrostatic and Functional Analysis of the Seven-Bladed WD β-Propellers (2008) (12)
- Different B cell subpopulations show distinct patterns in their IgH repertoire metrics (2021) (11)
- The allosteric modulation of complement C5 by knob domain peptides (2020) (11)
- Investigating the potential for a limited quantum speedup on protein lattice problems (2020) (10)
- WONKA: objective novel complex analysis for ensembles of protein–ligand structures (2015) (10)
- Hypergraphs for predicting essential genes using multiprotein complex data (2020) (10)
- Misato Controls Mitotic Microtubule Generation by Stabilizing the TCP-1 Tubulin Chaperone Complex (2015) (10)
- Current strategies for detecting functional convergence across B-cell receptor repertoires (2021) (10)
- OOMMPPAA: A Tool To Aid Directed Synthesis by the Combined Analysis of Activity and Structural Data (2014) (10)
- MHC binding affects the dynamics of different T-cell receptors in different ways (2019) (10)
- Fragment‐based modeling of membrane protein loops: Successes, failures, and prospects for the future (2014) (9)
- Filtering Next-Generation Sequencing of the Ig Gene Repertoire Data Using Antibody Structural Information (2018) (9)
- Mutual information and variants for protein domain-domain contact prediction (2012) (9)
- Exploring the potential of template-based modelling (2010) (9)
- Measuring rank robustness in scored protein interaction networks (2019) (9)
- Co-evolutionary distance predictions contain flexibility information (2021) (9)
- A Multi-Crystal Method for Extracting Obscured Signal from Crystallographic Electron Density (2016) (8)
- Crowdsourcing Yields a New Standard for Kinks in Protein Helices (2014) (8)
- Increasing the accuracy of protein loop structure prediction with evolutionary constraints (2018) (7)
- Fragment Libraries Designed to Be Functionally Diverse Recover Protein Binding Information More Efficiently Than Standard Structurally Diverse Libraries (2022) (7)
- A Maternally Inherited Autosomal Point in Human Phospholipase C Zeta Leads to Male Infertility (2012) (7)
- Using Phylogeny to Improve Genome-Wide Distant Homology Recognition (2006) (7)
- Learning from Docked Ligands: Ligand-Based Features Rescue Structure-Based Scoring Functions When Trained on Docked Poses (2021) (7)
- Ligity: A Non-Superpositional, Knowledge-Based Approach to Virtual Screening (2019) (7)
- A statistical approach using network structure in the prediction of protein characteristics (2007) (7)
- Modeling Functional Motions of Biological Systems by Customized Natural Moves (2016) (6)
- Combining co‐evolution and secondary structure prediction to improve fragment library generation (2018) (6)
- Assessment of model fit via network comparison methods based on subgraph counts (2018) (6)
- Modeling conformational flexibility of kinases in inactive states (2019) (6)
- The functional domain grouping of microtubule associated proteins (2008) (6)
- Epitope profiling of coronavirus-binding antibodies using computational structural modelling (2021) (6)
- Robust gene coexpression networks using signed distance correlation (2020) (6)
- Advances in computational structure-based antibody design. (2022) (6)
- CommWalker: correctly evaluating modules in molecular networks in light of annotation bias (2017) (6)
- Incorporating Target-Specific Pharmacophoric Information into Deep Generative Models for Fragment Elaboration (2021) (6)
- COGENT: evaluating the consistency of gene co-expression networks (2020) (6)
- ImmuneBuilder: Deep-Learning models for predicting the structures of immune proteins (2022) (6)
- pyHVis3D: visualising molecular simulation deduced H-bond networks in 3D: application to T-cell receptor interactions (2018) (5)
- Tertiary Element Interaction in HIV-1 TAR (2016) (5)
- Protein Interaction Networks and Their Statistical Analysis (2011) (5)
- Protein three-dimensional structural databases: domains, structurally aligned homologues and superfamilies. (1998) (5)
- Local Network Patterns in Protein-Protein Interfaces (2013) (5)
- Ten simple rules for surviving an interdisciplinary PhD (2017) (5)
- TCRBuilder: multi-state T-cell receptor structure prediction (2020) (5)
- Maturation of the human B-cell receptor repertoire with age (2019) (4)
- WONKA and OOMMPPAA: analysis of protein–ligand interaction data to direct structure-based drug design (2017) (4)
- AI in 3D compound design. (2022) (4)
- 27 – PROTEIN COMPARATIVE MODELLING AND DRUG DISCOVERY (2003) (4)
- Comparing co-evolution methods and their application to template-free protein structure prediction. (2016) (4)
- Evidence of Antibody Repertoire Functional Convergence through Public Baseline and Shared Response Structures (2020) (4)
- Protein-Ligand Interaction Graphs: Learning from Ligand-Shaped 3D Interaction Graphs to Improve Binding Affinity Prediction (2022) (4)
- A statistical model for helices with applications (2018) (4)
- RFQAmodel: Random Forest Quality Assessment to identify a predicted protein structure in the correct fold (2019) (4)
- The evolution of contact prediction: Evidence that contact selection in statistical contact prediction is changing (2019) (3)
- Hidden Markov Models for Protein Sequence Alignment (2004) (3)
- Challenges in antibody structure prediction (2022) (3)
- Maturation of naïve and antigen-experienced B-cell receptor repertoires with age (2019) (3)
- Ribosome occupancy profiles are conserved between structurally and evolutionarily related yeast domains (2021) (3)
- Current protein structure predictors do not produce meaningful folding pathways (2021) (3)
- In silico structural modeling of multiple epigenetic marks on DNA (2018) (3)
- Predicting Inter-Species Cross-Talk in Two-Component Signalling Systems (2012) (3)
- Deep Generative Models for 3D Compound Design (2019) (2)
- Structure of a Chordin-like Cysteine-rich Repeat (VWC module) from Collagen IIA (2004) (2)
- Protein Modeling and Structural Prediction (2014) (2)
- Dataset Augmentation Allows Deep Learning-Based Virtual Screening To Better Generalize To Unseen Target Classes, And Highlight Important Binding Interactions (2020) (2)
- Paragraph - Antibody Paratope prediction using Graph Neural Networks with minimal feature vectors (2022) (2)
- Linking evolution of protein structures through fragments (2007) (2)
- High-Throughput Antibody Structure Modeling and Design Using ABodyBuilder. (2018) (2)
- Challenges and Opportunities for Bayesian Statistics in Proteomics (2022) (2)
- Mutual information and variants for protein domain-domain contact prediction (2012) (1)
- Investigating Cotranslational Folding in Membrane Proteins using Fragment-Based Structure Prediction (2017) (1)
- Novel Vβ specific germline contacts shape an elite controller T cell response (2020) (1)
- The Therapeutic Antibody Profiler for Computational Developability Assessment. (2021) (1)
- A virtual drug-screening approach to conquer huge chemical libraries (2021) (1)
- Quantitative radiation damage studies in macromolecular X-ray crystallography (2013) (1)
- 1 Type II inhibitors targeting CDK 2 (2016) (1)
- Co-evolutionary Distance Prediction for Flexibility Prediction (2020) (1)
- i-Patch: inter protein contact prediction (2010) (1)
- Extracting Information from Gene Coexpression Networks of Rhizobium leguminosarum (2022) (1)
- PLOS Computational Biology 2017 Reviewer and Editorial Board Thank You (2018) (1)
- PANDDAs: multi-dataset methods for finding hits from fragment screening by X-ray crystallography (2015) (1)
- Title Deciphering chemotaxis pathways using cross species comparisons Permalink (2010) (1)
- Codon language embeddings provide strong signals for protein engineering (2022) (1)
- Exploring Folding Features in Protein Structure Prediction (2018) (1)
- HLA-DM Stabilizes the Empty MHCII Binding Groove: A Model Using Customized Natural Move Monte Carlo (2019) (1)
- Empirical Bayes functional models for hydrogen deuterium exchange mass spectrometry (2021) (1)
- Identification and functional characterization of a point mutation in the gene encoding the sperm factor phospholipase C zeta in an infertile male (2010) (1)
- PointVS: A Machine Learning Scoring Function that Identifies Important Binding Interactions (2022) (1)
- BDamage: Quantifying radiation damage in MX structures (2014) (1)
- Editorial: A Journey Through 50 Years of Structural Bioinformatics in Memoriam of Cyrus Chothia (2022) (0)
- Design, implementation and experimental validation of a network-based model to predict mitotic microtubule regulating proteins (2013) (0)
- Investigating the specificity of the histidine kinase response regulator complexes using mutual information (2010) (0)
- Observed Antibody Space: a resource for data mining next generation sequencing of antibody repertoires (2018) (0)
- Faculty Opinions recommendation of Residues coevolution guides the systematic identification of alternative functional conformations in proteins. (2017) (0)
- Chapter 8. Virtual Screening with Convolutional Neural Networks (2020) (0)
- Exploring the fold space preferences of ancient and newborn protein superfamilies (2014) (0)
- A Step Towards Generalisability: Training a Machine Learning Scoring Function for Structure-Based Virtual Screening (2023) (0)
- The Therapeutic Antibody Profiler (TAP): Five Computational Developability Guidelines (2018) (0)
- Role of mutual information for predicting contact residues in proteins (2012) (0)
- Heisenberg Community Detection and Protein Domains (2008) (0)
- Additional file 1 of Measuring rank robustness in scored protein interaction networks (2019) (0)
- Generating weighted and thresholded gene coexpression networks using signed distance correlation (2021) (0)
- Data driven approaches to improve the drug discovery process: a virtual screening quest in drug discovery (2014) (0)
- The use of a graph database is a complementary approach to a classical similarity search for identifying commercially available fragment merges (2022) (0)
- Functional module detection through integration of single-cell RNA sequencing data with protein–protein interaction networks (2020) (0)
- Author response: The Caenorhabditis elegans protein SAS-5 forms large oligomeric assemblies critical for centriole formation (2015) (0)
- Faculty Opinions recommendation of bbcontacts: prediction of β-strand pairing from direct coupling patterns. (2017) (0)
- Why Many Molecular Simulation Research Findings Might Be False: An Analysis of Inter-Simulations Differences Based on Simulation Time and Number of Replicas (2022) (0)
- In Silico Studies of Asymmetric Membranes Perturbations Caused by Dynamic Aggregation of a Cell-Penetrating Peptide (2014) (0)
- Protein loop structure prediction (2011) (0)
- Faculty Opinions recommendation of How precise are reported protein coordinate data (2014) (0)
- Faculty Opinions recommendation of Correlated positions in protein evolution and engineering. (2017) (0)
- Exploring The Ability Of Machine Learning-Based Virtual Screening Models To Identify The Functional Groups Responsible For Binding (2023) (0)
- Supplementary material for : Signatures of Co-translational Folding (2010) (0)
- Efficient Sampling for the Prediction of Long and Multidomain Protein Structures (2018) (0)
- Developability of Biotherapeutics: Computational Approaches. Edited by Sandeep Kumar and Satish K. Singh (2017) (0)
- Interactions of Two Amphipathic Cell-Penetrating Peptides with Complex Model Membranes: Insights from Molecular Dynamics Simulations (2013) (0)
- Faculty Opinions recommendation of Human plasma IgG1 repertoires are simple, unique, and dynamic. (2021) (0)
- Erratum (2018) (0)
- 1 Supporting Information : What Evidence is There for the Homology of Protein-Protein Interactions ? (2012) (0)
- Side chain prediction — Protein structure prediction — Antibodies — Antibody Design — Rotamer Library Authors (2017) (0)
- Faculty Opinions recommendation of Multi-Donor Longitudinal Antibody Repertoire Sequencing Reveals the Existence of Public Antibody Clonotypes in HIV-1 Infection. (2018) (0)
- CoPriNet: graph neural networks provide accurate and rapid compound price prediction for molecule prioritisation (2023) (0)
- Faculty of 1000 evaluation for Critical assessment of methods of protein structure prediction: Progress and new directions in round XI. (2017) (0)
- AI3SD Video: Machine Learning for Early Stage Drug Discovery (2020) (0)
- BIOINFORMATICS ORIGINAL PAPER Exploring the potential of template-based modelling (2010) (0)
- Microfluidics-enabled fluorescence-activated cell sorting of single pathogen-specific antibody secreting cells for the rapid discovery of monoclonal antibodies (2023) (0)
- Testing the Limits of SMILES-based De Novo Molecular Generation with Curriculum and Deep Reinforcement Learning (2022) (0)
- Faculty Opinions recommendation of From residue coevolution to protein conformational ensembles and functional dynamics. (2017) (0)
- Faculty Opinions recommendation of Conservation of protein structure over four billion years. (2013) (0)
- Using the protein interaction network to predict protein folds without homology (2007) (0)
- Computationally profiling peptide:MHC recognition by T-cell receptors and T-cell receptor-mimetic antibodies (2022) (0)
- Positioning of Membrane Proteins Positioning of Membrane Proteins Within the Lipid Bilayer Within the Lipid Bilayer (2002) (0)
- Exploiting residue–residue contact information beyond structure predictions in molecular replacement (2018) (0)
- Faculty Opinions recommendation of In-depth determination and analysis of the human paired heavy- and light-chain antibody repertoire. (2016) (0)
- A functional Bayesian model for hydrogen-deuterium exchange mass-spectrometry (2022) (0)
- Faculty Opinions recommendation of Three-dimensional structures of membrane proteins from genomic sequencing. (2013) (0)
- Rule 5 : Different Fields Have Different Reward Models : KnowWhat You Can Expect (2015) (0)
- Faculty Opinions recommendation of Evolutionary conservation of codon optimality reveals hidden signatures of cotranslational folding. (2013) (0)
- KA-Search: Rapid and exhaustive sequence identity search of known antibodies (2022) (0)
- Ranking of communities in multiplex spatiotemporal models of brain dynamics (2022) (0)
- Ranking of communities in multiplex spatiotemporal models of brain dynamics (2022) (0)
- Conservation, error and dynamics in protein interaction networks. (2011) (0)
- Structural modelling of transmembrane domains (2011) (0)
- Peptide Centric Vβ Specific Germline Contacts Shape a Specialist T Cell Response (2022) (0)
- Faculty of 1000 evaluation for Applications of contact predictions to structural biology. (2017) (0)
- Fold recognition and alignment in the ‘twilight zone’ (2013) (0)
- Faculty Opinions recommendation of Correcting the record of structural publications requires joint effort of the community and journal editors. (2016) (0)
- Faculty Opinions recommendation of Coevolution Analysis of HIV-1 Envelope Glycoprotein Complex. (2017) (0)
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