David Edwards
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Researcher in genomics and bioinformatics
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Biology
David Edwards's Degrees
- PhD Genomics Stanford University
- Masters Bioinformatics University of California, Berkeley
- Bachelors Biology University of California, Berkeley
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(Suggest an Edit or Addition)David Edwards's Published Works
Number of citations in a given year to any of this author's works
Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- Shifting the limits in wheat research and breeding using a fully annotated reference genome (2018) (1961)
- The genome of the mesopolyploid crop species Brassica rapa (2011) (1771)
- Early allopolyploid evolution in the post-Neolithic Brassica napus oilseed genome (2014) (1641)
- A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome (2014) (1412)
- Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement (2013) (987)
- The Brassica oleracea genome reveals the asymmetrical evolution of polyploid genomes (2014) (867)
- Speed breeding is a powerful tool to accelerate crop research and breeding (2017) (562)
- Transcriptome and methylome profiling reveals relics of genome dominance in the mesopolyploid Brassica oleracea (2014) (369)
- The pangenome of an agronomically important crop plant Brassica oleracea (2016) (294)
- Accessing complex crop genomes with next-generation sequencing (2012) (250)
- The pangenome of hexaploid bread wheat (2017) (243)
- A reference genome for pea provides insight into legume genome evolution (2019) (240)
- Application of genomics-assisted breeding for generation of climate resilient crops: progress and prospects (2015) (198)
- Towards CRISPR/Cas crops - bringing together genomics and genome editing. (2017) (195)
- Plant pan-genomes are the new reference (2020) (191)
- Genotyping‐by‐sequencing approaches to characterize crop genomes: choosing the right tool for the right application (2017) (180)
- Global agricultural intensification during climate change: a role for genomics (2015) (177)
- The reference genetic linkage map for the multinational Brassica rapa genome sequencing project (2007) (174)
- Resequencing of 429 chickpea accessions from 45 countries provides insights into genome diversity, domestication and agronomic traits (2019) (170)
- Plant genome sequencing: applications for crop improvement. (2010) (170)
- Multiple genes encoding the conserved CCAAT-box transcription factor complex are expressed in Arabidopsis. (1998) (169)
- Structural variations in plant genomes (2014) (168)
- Towards plant pangenomics. (2016) (161)
- Homoeologous exchange is a major cause of gene presence/absence variation in the amphidiploid Brassica napus (2018) (157)
- A high-density SNP genotyping array for Brassica napus and its ancestral diploid species based on optimised selection of single-locus markers in the allotetraploid genome (2016) (151)
- Molecular Genetic Markers: Discovery, Applications, Data Storage and Visualisation (2009) (148)
- New technologies for ultra-high throughput genotyping in plants. (2009) (140)
- A comprehensive draft genome sequence for lupin (Lupinus angustifolius), an emerging health food: insights into plant–microbe interactions and legume evolution (2016) (140)
- Discovering genetic polymorphisms in next-generation sequencing data. (2009) (134)
- Prioritization of candidate genes in “QTL-hotspot” region for drought tolerance in chickpea (Cicer arietinum L.) (2015) (127)
- Super-Pangenome by Integrating the Wild Side of a Species for Accelerated Crop Improvement (2019) (126)
- Sequencing and assembly of low copy and genic regions of isolated Triticum aestivum chromosome arm 7DS. (2011) (120)
- De novo sequencing of plant genomes using second-generation technologies (2009) (114)
- Assembly and comparison of two closely related Brassica napus genomes (2017) (111)
- Plant bioinformatics: from genome to phenome. (2004) (107)
- Climate change and the need for agricultural adaptation. (2020) (107)
- Single nucleotide polymorphism discovery from wheat next-generation sequence data. (2012) (103)
- Next-generation sequencing applications for wheat crop improvement. (2012) (100)
- Molecular mapping of qualitative and quantitative loci for resistance to Leptosphaeria maculans causing blackleg disease in canola (Brassica napus L.) (2012) (99)
- Sequencing wheat chromosome arm 7BS delimits the 7BS/4AL translocation and reveals homoeologous gene conservation (2012) (98)
- Genetic and physical mapping of flowering time loci in canola (Brassica napus L.) (2012) (95)
- AutoSNPdb: an annotated single nucleotide polymorphism database for crop plants (2008) (91)
- Genome sequence data: management, storage, and visualization. (2009) (88)
- BioNano genome mapping of individual chromosomes supports physical mapping and sequence assembly in complex plant genomes (2016) (87)
- Investigating Drought Tolerance in Chickpea Using Genome-Wide Association Mapping and Genomic Selection Based on Whole-Genome Resequencing Data (2018) (86)
- Transient Nod factor-dependent gene expression in the nodulation-competent zone of soybean (Glycine max [L.] Merr.) roots. (2012) (82)
- Pangenomics Comes of Age: From Bacteria to Plant and Animal Applications. (2019) (82)
- The genome sequence of the Antarctic bullhead notothen reveals evolutionary adaptations to a cold environment (2014) (81)
- Genetic map construction and QTL mapping of resistance to blackleg (Leptosphaeria maculans) disease in Australian canola (Brassica napus L.) cultivars (2009) (79)
- Dispersion and domestication shaped the genome of bread wheat. (2013) (79)
- Transcriptomic Changes in Coral Holobionts Provide Insights into Physiological Challenges of Future Climate and Ocean Change (2015) (78)
- Bioinformatics tools and databases for analysis of next-generation sequence data. (2012) (76)
- Advances in genomics for adapting crops to climate change (2016) (75)
- Variation in abundance of predicted resistance genes in the Brassica oleracea pangenome (2018) (72)
- Capturing the Biofuel Wellhead and Powerhouse: The Chloroplast and Mitochondrial Genomes of the Leguminous Feedstock Tree Pongamia pinnata (2012) (71)
- SNP markers-based map construction and genome-wide linkage analysis in Brassica napus. (2013) (68)
- Sequence and structure of Brassica rapa chromosome A3 (2010) (67)
- Early transcriptional changes in the reef-building coral Acropora aspera in response to thermal and nutrient stress (2014) (67)
- SNP Discovery Using a Pangenome: Has the Single Reference Approach Become Obsolete? (2017) (66)
- Genomic distribution of simple sequence repeats in Brassica rapa. (2007) (66)
- Discovery of Single Nucleotide Polymorphisms in Complex Genomes Using SGSautoSNP (2012) (64)
- A consensus map of rapeseed (Brassica napus L.) based on diversity array technology markers: applications in genetic dissection of qualitative and quantitative traits (2013) (62)
- Improvements in Genomic Technologies: Application to Crop Genomics. (2017) (62)
- Identification of transposon-tagged genes by the random sequencing of Mutator-tagged DNA fragments from Zea mays. (2000) (61)
- A chromosomal genomics approach to assess and validate the desi and kabuli draft chickpea genome assemblies. (2014) (61)
- Single nucleotide polymorphism discovery in barley using autoSNPdb. (2009) (60)
- Analytical and Decision Support Tools for Genomics-Assisted Breeding. (2016) (60)
- A chickpea genetic variation map based on the sequencing of 3,366 genomes (2021) (59)
- Plant pangenomics: approaches, applications and advancements. (2020) (59)
- Mapping QTLs of resistance to head splitting in cabbage (Brassica oleracea L.var. capitata L.) (2015) (59)
- Characterization of disease resistance genes in the Brassica napus pangenome reveals significant structural variation (2019) (59)
- The Genome of a Southern Hemisphere Seagrass Species (Zostera muelleri)1[OPEN] (2016) (59)
- High-resolution skim genotyping by sequencing reveals the distribution of crossovers and gene conversions in Cicer arietinum and Brassica napus (2015) (58)
- Genome editors take on crops (2017) (57)
- Evaluation of solution culture techniques for studying aluminium toxicity in plants (1991) (57)
- Adapting legume crops to climate change using genomic approaches (2018) (57)
- A transcriptomics resource for wheat functional genomics. (2004) (57)
- Construction and comparison of three reference-quality genome assemblies for soybean. (2019) (56)
- Genomic advances will herald new insights into the Brassica: Leptosphaeria maculans pathosystem. (2012) (56)
- Characterization of the flanking regions of Zea mays microsatellites reveals a large number of useful sequence polymorphisms (2002) (56)
- WheatGenome.info: an integrated database and portal for wheat genome information. (2012) (56)
- Trait associations in the pangenome of pigeon pea (Cajanus cajan) (2020) (53)
- Advances in Integrating Genomics and Bioinformatics in the Plant Breeding Pipeline (2018) (52)
- ESTABLISHMENT OF AN EFFECTIVE ENDOMYCORRHIZAL ASSOCIATION ON CASSAVA IN FLOWING SOLUTION CULTURE AND ITS EFFECTS ON PHOSPHORUS NUTRITION (1982) (52)
- High‐throughput genotyping for species identification and diversity assessment in germplasm collections (2015) (51)
- Genome Analysis Identified Novel Candidate Genes for Ascochyta Blight Resistance in Chickpea Using Whole Genome Re-sequencing Data (2017) (51)
- Insight into the evolution and functional characteristics of the pan‐genome assembly from sesame landraces and modern cultivars (2018) (50)
- Differential Regulation of Genes Involved in Root Morphogenesis and Cell Wall Modification is Associated with Salinity Tolerance in Chickpea (2018) (49)
- Assessing and Exploiting Functional Diversity in Germplasm Pools to Enhance Abiotic Stress Adaptation and Yield in Cereals and Food Legumes (2017) (48)
- The application of genomics and bioinformatics to accelerate crop improvement in a changing climate. (2016) (47)
- Genome-Wide Association Study of Genetic Control of Seed Fatty Acid Biosynthesis in Brassica napus (2017) (47)
- Exploring the genetic and adaptive diversity of a pan-Mediterranean crop wild relative: narrow-leafed lupin (2018) (47)
- Rapid divergence of repetitive DNAs in Brassica relatives. (2011) (47)
- Genome-wide Association Study Identifies New Loci for Resistance to Leptosphaeria maculans in Canola (2016) (46)
- Identification and characterization of candidate Rlm4 blackleg resistance genes in Brassica napus using next-generation sequencing. (2012) (46)
- INDEL variation in the regulatory region of the major flowering time gene LanFTc1 is associated with vernalization response and flowering time in narrow‐leafed lupin (Lupinus angustifolius L.) (2018) (45)
- A high-throughput SNP array in the amphidiploid species Brassica napus shows diversity in resistance genes (2014) (45)
- A high-throughput SNuPE assay for genotyping SNPs in the flanking regions of Zea mays sequence tagged simple sequence repeats (2003) (45)
- Genome-wide identification and comparative analysis of NBS-LRR resistance genes in Brassica napus (2017) (45)
- Identification and characterization of more than 4 million intervarietal SNPs across the group 7 chromosomes of bread wheat. (2015) (45)
- Decreased Rates of Nitrate Uptake During Pod Fill by Cowpea, Green Gram, and Soybean (1988) (44)
- Bread matters: a national initiative to profile the genetic diversity of Australian wheat. (2012) (43)
- A Complex Recombination Pattern in the Genome of Allotetraploid Brassica napus as Revealed by a High-Density Genetic Map (2014) (43)
- Bottlenecks for genome-edited crops on the road from lab to farm (2018) (43)
- Bias in resistance gene prediction due to repeat masking (2018) (43)
- Functional genomics to study stress responses in crop legumes: progress and prospects. (2013) (42)
- SNP discovery and applications in Brassica napus (2012) (42)
- Copy number variation and disease resistance in plants (2017) (42)
- Wild Origins of Macadamia Domestication Identified Through Intraspecific Chloroplast Genome Sequencing (2019) (41)
- Genetic maps and the use of synteny. (2009) (41)
- Gene loss in the fungal canola pathogen Leptosphaeria maculans (2014) (40)
- Fast-forward breeding for a food-secure world. (2021) (40)
- Towards a more predictable plant breeding pipeline with CRISPR/Cas-induced allelic series to optimize quantitative and qualitative traits. (2018) (40)
- Determination of total soluble aluminum in soil solution using pyrocatechol violet, lanthanum and iron to discriminate against micro‐particulates and organic ligands (1992) (39)
- Genome-wide survey of the seagrass Zostera muelleri suggests modification of the ethylene signalling network (2015) (39)
- Coverage-based consensus calling (CbCC) of short sequence reads and comparison of CbCC results to identify SNPs in chickpea (Cicer arietinum; Fabaceae), a crop species without a reference genome. (2012) (38)
- A Survey of the Brassica rapa genome by BAC-end sequence analysis and comparison with Arabidopsis thaliana. (2006) (38)
- Genomic Databases for Crop Improvement (2012) (37)
- Identification and characterization of simple sequence repeat (SSR) markers derived in silico from Brassica oleracea genome shotgun sequences (2006) (37)
- Targeted identification of genomic regions using TAGdb (2010) (36)
- Construction and characterisation of a yeast artificial chromosome library containing three haploid maize genome equivalents (1992) (36)
- Challenging the dogma of a narrow supply range between deficiency and toxicity of boron (1997) (36)
- CicArVarDB: SNP and InDel database for advancing genetics research and breeding applications in chickpea (2015) (34)
- The emergence of molecular profiling and omics techniques in seagrass biology; furthering our understanding of seagrasses (2016) (34)
- The Chicken Pan-Genome Reveals Gene Content Variation and a Promoter Region Deletion in IGF2BP1 Affecting Body Size (2021) (34)
- Identification and characterization of simple sequence repeat (SSR) markers from Fragaria x ananassa expressed sequences. (2006) (34)
- Identification of systemic responses in soybean nodulation by xylem sap feeding and complete transcriptome sequencing reveal a novel component of the autoregulation pathway. (2012) (33)
- Genetic and signalling pathways of dry fruit size: targets for genome editing‐based crop improvement (2019) (31)
- Genome sequencing approaches and successes. (2009) (31)
- Effects of low activities of aluminium on soybean (Glycine max) (1990) (31)
- Sequencing the USDA core soybean collection reveals gene loss during domestication and breeding (2021) (31)
- Identification and characterization of simple sequence repeat markers from Brassica napus expressed sequences (2007) (29)
- An advanced reference genome of Trifolium subterraneum L. reveals genes related to agronomic performance (2017) (29)
- Bioinformatics : Tools and Applications (2009) (28)
- Preclinical development of a molecular clamp‐stabilised subunit vaccine for severe acute respiratory syndrome coronavirus 2 (2021) (28)
- Skim-based genotyping by sequencing. (2015) (28)
- Current status of structural variation studies in plants (2021) (27)
- RNA-Seq and metabolic flux analysis of Tetraselmis sp. M8 during nitrogen starvation reveals a two-stage lipid accumulation mechanism. (2017) (27)
- Modelling of gene loss propensity in the pangenomes of three Brassica species suggests different mechanisms between polyploids and diploids (2021) (26)
- Single-Cell Genomic Analysis in Plants (2018) (26)
- A comparative map viewer integrating genetic maps for Brassica and Arabidopsis (2007) (26)
- Identifying genetic diversity of avirulence genes in Leptosphaeria maculans using whole genome sequencing (2013) (25)
- Predicting polymorphic EST‐SSRs in silico (2013) (24)
- Development of chromosome-arm-specific microsatellite markers in Triticum aestivum (Poaceae) using NGS technology. (2012) (24)
- The pangenome of banana highlights differences between genera and genomes (2021) (22)
- Boron toxicity in sunflower (1997) (22)
- The western Mediterranean region provided the founder population of domesticated narrow-leafed lupin (2018) (22)
- Characterisation of fulvic and humic acids from leaves of Eucalyptus camaldulensis and from decomposed hay (2000) (22)
- Mining for SNPs and SSRs using SNPServer, dbSNP and SSR taxonomy tree. (2009) (22)
- Sorghum Pan-Genome Explores the Functional Utility for Genomic-Assisted Breeding to Accelerate the Genetic Gain (2021) (21)
- BASC: an integrated bioinformatics system for Brassica research (2006) (21)
- Crop breeding for a changing climate: integrating phenomics and genomics with bioinformatics (2021) (21)
- Molecular Marker Discovery and Genetic Map Visualisation (2009) (20)
- Genetic, Biochemical, and Morphological Diversity of the Legume Biofuel Tree Pongamia pinnata (2013) (20)
- Erratum: Early allopolyploid evolution in the post-Neolithic Brassica napus oilseed genome (Science (2014) 345:6199 (950-953)) (2014) (20)
- High intraspecific diversity of Restorer‐of‐fertility‐like genes in barley (2018) (19)
- Clinical phenotype and molecular analysis of a three-generation family with an interstitial deletion of the short arm of chromosome 5. (1992) (19)
- Future directions in the molecular breeding of forage and turf (2005) (19)
- Second-generation sequencing for gene discovery in the Brassicaceae. (2012) (19)
- CMap3D: a 3D visualization tool for comparative genetic maps (2010) (19)
- Genomic rearrangements have consequences for introgression breeding as revealed by genome assemblies of wild and cultivated lentil species (2021) (18)
- Induced Methylation in Plants as a Crop Improvement Tool: Progress and Perspectives (2020) (18)
- Genotype–Environment mismatch of kelp forests under climate change (2021) (18)
- A bi-filtering method for processing single nucleotide polymorphism array data improves the quality of genetic map and accuracy of quantitative trait locus mapping in doubled haploid populations of polyploid Brassica napus (2015) (18)
- Genomic comparison of two independent seagrass lineages reveals habitat-driven convergent evolution (2018) (18)
- Understanding Host–Pathogen Interactions in Brassica napus in the Omics Era (2020) (18)
- Genetic variation among 481 diverse soybean accessions, inferred from genomic re-sequencing (2021) (17)
- CropSNPdb: a database of SNP array data for Brassica crops and hexaploid bread wheat (2019) (16)
- Next Generation Characterisation of Cereal Genomes for Marker Discovery (2013) (16)
- A simple positive pressure apparatus for the ultra-filtration of soil solution (1991) (16)
- Preface: advances in DNA sequencing accelerating plant biotechnology. (2012) (16)
- Assembly of the non‐heading pak choi genome and comparison with the genomes of heading Chinese cabbage and the oilseed yellow sarson (2020) (16)
- Resistance Gene Analogs in the Brassicaceae: Identification, Characterization, Distribution, and Evolution1[OPEN] (2020) (16)
- Scanning the Effects of Ethyl Methanesulfonate on the Whole Genome of Lotus japonicus Using Second-Generation Sequencing Analysis (2015) (15)
- Plant Bioinformatics: Methods and Protocols (2015) (15)
- Simple sequence repeat (SSR) and GC distribution in the Arabidopsis thaliana genome. (2005) (15)
- Bioinformatics and Plant Genomics for Staple Crops Improvement (2008) (14)
- Brassica napus genes Rlm4 and Rlm7, conferring resistance to Leptosphaeria maculans, are alleles of the Rlm9 wall‐associated kinase‐like resistance locus (2021) (14)
- Development and Validation of Thinopyrum elongatum–Expressed Molecular Markers Specific for the Long Arm of Chromosome 7E (2016) (14)
- The application of pangenomics and machine learning in genomic selection in plants (2021) (14)
- Genome structural evolution in Brassica crops (2021) (14)
- Automated discovery of single nucleotide polymorphism and simple sequence repeat molecular genetic markers. (2007) (14)
- Genome-Wide Association Studies in Plants (2019) (13)
- Genome-Wide Identification and Evolution of Receptor-Like Kinases (RLKs) and Receptor like Proteins (RLPs) in Brassica juncea (2020) (13)
- Rice 3D chromatin structure correlates with sequence variation and meiotic recombination rate (2020) (13)
- Pangenomics in crop improvement—from coding structural variations to finding regulatory variants with pangenome graphs (2021) (13)
- Molecular clamp stabilised Spike protein for protection against SARS-CoV-2 (2020) (13)
- Establishing a distributed national research infrastructure providing bioinformatics support to life science researchers in Australia (2017) (12)
- An efficient approach to BAC based assembly of complex genomes (2016) (12)
- Machine learning in agriculture: from silos to marketplaces (2020) (12)
- Bioinformatics: identification of markers from next-generation sequence data. (2015) (12)
- Resources for image-based high-throughput phenotyping in crops and data sharing challenges (2021) (12)
- Prediction of pathogenicity genes involved in adaptation to a lupin host in the fungal pathogens Botrytis cinerea and Sclerotinia sclerotiorum via comparative genomics (2019) (11)
- Genome sequencing initiatives (2012) (11)
- Effects of silicic acid on the chemistry of monomeric and polymeric (Al13) aluminium species in solutions (1995) (11)
- Genetic and morphological diversity in the Brassicas and wild relatives (2009) (11)
- Identification and QTL mapping of resistance to Turnip yellows virus (TuYV) in oilseed rape, Brassica napus (2019) (11)
- Speed breeding is a powerful tool to accelerate crop research and breeding (2017) (11)
- Genomics Armed With Diversity Leads the Way in Brassica Improvement in a Changing Global Environment (2021) (11)
- The Impact of Genomics Technology on Adapting Plants to Climate Change (2016) (11)
- Molecular characterization of disease resistance in Brassica juncea – The current status and the way forward (2020) (10)
- Climate Clever Clovers: New Paradigm to Reduce the Environmental Footprint of Ruminants by Breeding Low Methanogenic Forages Utilizing Haplotype Variation (2017) (10)
- Frontiers in Dissecting and Managing Brassica Diseases: From Reference-Based RGA Candidate Identification to Building Pan-RGAomes (2020) (10)
- Genome-wide identification and comparative analysis of resistance genes in Brassica juncea (2020) (9)
- Effect of Leptosphaeria maculans Infection on Promoter DNA Methylation of Defence Genes in Brassica napus (2020) (9)
- Resistance Gene Analogs in the Brassicaceae: Identification, Characterization, Distribution, and Evolution. (2020) (9)
- Revolution in Genotyping Platforms for Crop Improvement. (2018) (9)
- DNA Sequence Databases (2009) (9)
- Computational Identification and Comparative Analysis of miRNAs in Wheat Group 7 Chromosomes (2013) (9)
- The use of total ionic strength adjusting buffers in determining fluoride concentration in soil solutions by ion selective electrometry (1993) (9)
- Rapid delivery systems for future food security (2021) (9)
- Phosphorus nutrition of Caustis blakei grown with two phosphorus sources of different solubility in two soils of differing phosphorus adsorption capacity (2006) (8)
- Pangenomes as a Resource to Accelerate Breeding of Under-Utilised Crop Species (2022) (8)
- Genetics and genomics of insect resistance in Brassicaceae crops. (2011) (8)
- Sequence Based DNA Markers and Genotyping for Cereal Genomics and Breeding (2013) (8)
- Analysis of the Brassica ´A´ and ´C´ genomes and comparison with the genome of Arabidopsis Thaliana (2006) (8)
- Using Genomics to Adapt Crops to Climate Change (2019) (7)
- runBNG: a software package for BioNano genomic analysis on the command line (2017) (7)
- The improved assembly of 7DL chromosome provides insight into the structure and evolution of bread wheat (2019) (7)
- Haplotype mapping uncovers unexplored variation in wild and domesticated soybean at the major protein locus cqProt-003 (2021) (7)
- Tapering analysis of airways with bronchiectasis (2018) (7)
- Recent Findings Unravel Genes and Genetic Factors Underlying Leptosphaeria maculans Resistance in Brassica napus and Its Relatives (2020) (7)
- BioNanoAnalyst: a visualisation tool to assess genome assembly quality using BioNano data (2017) (7)
- Amborella gene presence/absence variation is associated with abiotic stress responses that may contribute to environmental adaptation (2021) (7)
- Integrated physical map of bread wheat chromosome arm 7DS to facilitate gene cloning and comparative studies. (2019) (7)
- Population Diversity of Leptosphaeria maculans in Australia (2015) (7)
- Plant Bioinformatics (2016) (6)
- Expanding Gene-Editing Potential in Crop Improvement with Pangenomes (2022) (6)
- Management of phosphorus supply to Australian floricultural species (2004) (6)
- Chloroplast genomics: expanding resources for an evolutionary conserved miniature molecule with enigmatic applications. (2016) (6)
- Mapping of partial resistance to Phytophthora sojae in soybean PIs using whole‐genome sequencing reveals a major QTL (2021) (6)
- Blackleg resistance in rapeseed: phenotypic screen, molecular markers and genome wide linkage and association mapping (2011) (6)
- QTL Genetic Mapping Study for Traits Affecting Meal Quality in Winter Oilseed Rape (Brassica Napus L.) (2021) (6)
- Abiotic stress tolerance of the Brassica oilseeds. (2011) (5)
- Role of bioinformatics as a tool for vegetable Brassica species. (2011) (5)
- A study of genetic diversity among Brassica napus and Brassica juncea germplasm collections using simple sequence repeat (SSR) molecular markers. (2003) (5)
- Chromosomal genomics facilitates fine mapping of a Russian wheat aphid resistance gene (2015) (5)
- New technologies for ultrahigh-throughput genotyping in plant taxonomy. (2014) (5)
- Large-Scale Structural Variation Detection in Subterranean Clover Subtypes Using Optical Mapping (2018) (5)
- Role of bioinformatics as a tool for oilseed Brassica species. (2012) (5)
- Studying the Genetic Diversity of Yam Bean Using a New Draft Genome Assembly (2021) (4)
- Progress in single-access information systems for wheat and rice crop improvement (2019) (4)
- Applied Computational Tools for Crop Genome Research (2003) (4)
- Databases for Wheat Genomics and Crop Improvement. (2017) (4)
- Nitrogen nutrition of ginger (Zingiber officinale) II. Establishment of a leaf analysis test (1981) (4)
- Identification and characterization of candidate Rlm 4 blackleg resistance genes in Brassica napus using next-generation sequencing (2012) (4)
- Genome-wide analysis of NBS-LRR genes in Indian mustard (Brassica juncea) and prediction of candidate disease resistance genes (2018) (4)
- Wheat Panache: A pangenome graph database representing presence–absence variation across sixteen bread wheat genomes (2022) (4)
- De Novo SNP Discovery and Genotyping of Iranian Pimpinella Species Using ddRAD Sequencing (2021) (4)
- Linkage mapping and QTL analysis of flowering time using ddRAD sequencing with genotype error correction in Brassica napus (2020) (4)
- Identification and characterization of candidate Rlm4 blackleg resistance genes in Brassica napus using next-generation sequencing Using NGS to identify candidate (2012) (4)
- Status and advances in mining for blackleg (Leptosphaeria maculans) quantitative resistance (QR) in oilseed rape (Brassica napus) (2021) (4)
- Marine heatwaves have minimal influence on the quality of adult Sydney rock oyster flesh. (2021) (4)
- Genome-Wide Identification, Expression and Functional Analysis Reveal the Involvement of FCS-Like Zinc Finger Gene Family in Submergence Response in Rice (2021) (4)
- Sorghum pan-genome explores the functional utility to accelerate the genetic gain (2021) (4)
- Brassica genome evolution: dynamics and plasticity. (2011) (4)
- Genomic prediction of preliminary yield trials in chickpea: Effect of functional annotation of SNPs and environment (2021) (3)
- Comparison and evolutionary analysis of Brassica nucleotide binding site leucine rich repeat (NLR) genes and importance for disease resistance breeding (2020) (3)
- Legume Pangenome Construction Using an Iterative Mapping and Assembly Approach. (2020) (3)
- IWGSC: PhySICal MaPPInG Standard ProtoColS WorkShoP (2010) (3)
- Identification of transposon-tagged maize genes displaying homology to arrayed cDNA clones using Mutator insertion display (2002) (3)
- Detection of Epistasis for Seed and Some Phytochemical Traits in Coriander under Different Irrigation Regimes (2021) (3)
- A rat model of ischemic osteonecrosis for investigating local therapeutics using biomaterials. (2021) (3)
- The importance of plant pan-genomes in breeding. (2020) (3)
- Brassica proteomics and metabolomics. (2011) (3)
- Responses of Bradyrhizobium-inoculated mungbean (Vigna radiata) to applied nitrogen (1993) (3)
- Yield is negatively correlated with nucleotide-binding leucine-rich repeat gene content in soybean (2021) (3)
- Wheat Panache - a pangenome graph database representing presence/absence variation across 16 bread wheat genomes (2022) (3)
- A pangenome analysis pipeline (PSVCP) provides insights into rice functional gene identification (2022) (3)
- Bioinformatics Tools to Assist Breeding for Climate Change (2013) (2)
- Quantitative Trait Locus Mapping of Resistance to Turnip Yellows Virus in Brassica rapa and Brassica oleracea and Introgression of These Resistances by Resynthesis Into Allotetraploid Plants for Deployment in Brassica napus (2021) (2)
- Comparative analysis of Stowaway‐like miniature inverted repeat transposable elements in wheat group 7 chromosomes: Abundance, composition, and evolution (2014) (2)
- Sequence analysis of the canola genome (2011) (2)
- SNP analysis of Macadamia integrifolia chloroplast genomes to determine the genetic structure of wild populations (2014) (2)
- Marker/trait associations identified in spring wheat using 25 years of CIMMYT international trials (2008) (2)
- Plant Genomics and Climate Change (2016) (2)
- Genetic and physical mapping of flowering time loci in oilseed rape (Brassica napus L.) (2016) (2)
- Accessing integrated Brassica genetic and genomic data using the BASC Server. (2007) (2)
- Towards a wheat phenome atlas and a phenome atlas toolbox: What are they? What progress? (2008) (2)
- Comprar Bioinformatics · Tools and Applications | Edwards, David | 9780387927374 | Springer (2009) (2)
- Next Generation Sequencing and Germplasm Resources (2014) (2)
- A differential k-mer analysis pipeline for comparing RNA-Seq transcriptome and meta-transcriptome datasets without a reference (2018) (2)
- Author Correction: Plant pan-genomes are the new reference (2020) (2)
- Wheat genomics and breeding: bridging the gap. (2021) (2)
- Genetic map construction and QTL mapping of disease resistance to blackleg (Leptosphaeria maculans) in cultivars of Australian canola (Brassica napus L.) (2009) (2)
- Draft Genome Assembly and Transcriptome Dataset for European Turnip (Brassica rapa L. ssp. rapifera), ECD4 Carrying Clubroot Resistance (2021) (2)
- Method for Genome-Wide Association Study: A Soybean Example. (2020) (1)
- A pangenome analysis pipeline provides insights into functional gene identification in rice (2023) (1)
- Genetic variation among 481 diverse soybean accessions, inferred from genomic re-sequencing (2021) (1)
- Mining of Cloned Disease Resistance Gene Homologs (CDRHs) in Brassica Species and Arabidopsis thaliana (2022) (1)
- Rapid Application of the Molecular Clamp Platform for SARS-CoV-2 (2020) (1)
- Characterising diversity in the Brassica genomes (2013) (1)
- The More the Merrier? Investigating Copy Number Variation in Brassica Disease Resistance (2016) (1)
- RefKA: A fast and efficient long-read genome assembly approach for large and complex genomes (2020) (1)
- Genetic and Genomic Resources for Soybean Breeding Research (2022) (1)
- High-Throughput Genotyping Technologies in Plant Taxonomy. (2021) (1)
- Data on draft genome sequence of chickpea (Cicer arietinum) (2018) (1)
- Virulence/avirulence patterns among Leptosphaeria maculans isolates determines expression of resistance, senescence and yellowing in cotyledons of Brassica napus (2020) (1)
- Future Prospects for Brassica Oilseed Improvement through Genomics (2011) (1)
- Physical mapping in Brassica species. (2011) (1)
- Building a successful international research community through data sharing: The case of the Wheat Information System (WheatIS) (2020) (1)
- Molecular marker databases. (2015) (1)
- Rice 3D chromatin structure correlates with sequence variation and meiotic recombination rate (2020) (1)
- Large-scale structural variation detection in subterranean clover subtypes using optical mapping validated at nucleotide level (2017) (1)
- Comprehensive transcriptomic analysis of two RIL parents with contrasting salt responsiveness identifies polyadenylated and non‐polyadenylated flower lncRNAs in chickpea (2022) (1)
- Developing Genomic Resources to Improve Abiotic Stress Tolerance in Wheat (2012) (0)
- Updated guidelines for gene nomenclature in wheat (2023) (0)
- Current biology special issue: AGRI2019☆☆☆ (2020) (0)
- Bottlenecks for genome-edited crops on the road from lab to farm (2018) (0)
- Towards the Pangenome (2016) (0)
- Advances in genome technology and its application to Brassica improvement. (2003) (0)
- Editorial overview: Feeding the world in a changing climate. (2018) (0)
- Editorial overview: Feeding a warming planet (2020) (0)
- Diversity of fatty acid biosynthesis genes across the soybean pangenome. (2023) (0)
- Data from: Genotype-environment mismatch of kelp forests under climate change (2021) (0)
- AGGRECAN METABOLITES AND ENZYME ACTIVITY IN SYNOVIAL FLUIDS FROM NORMAL AND DEGENERATE KNEES (2006) (0)
- Genome-wide association mapping and gene expression analysis identify OsCPS1 as a new candidate gene controlling early seedling length in rice (2022) (0)
- Legume-wide comparative analysis of pod shatter locus PDH1 reveals phaseoloid specificity, high cowpea expression and stress responsive genomic context. (2023) (0)
- Blast Formatted Next Generation Sequencing (NGS) Data for TAGdb (2015) (0)
- Author Correction: A chickpea genetic variation map based on the sequencing of 3,366 genomes (2022) (0)
- Author Correction: A chickpea genetic variation map based on the sequencing of 3,366 genomes (2022) (0)
- A high-density SNP genotyping array for Brassica napus and its ancestral diploid species based on optimised selection of single-locus markers in the allotetraploid genome (2016) (0)
- Differential Regulation of Genes Involved in Root Morphogenesis and Cell Wall Modification is Associated with Salinity Tolerance in Chickpea (2018) (0)
- Investigating the molecular mechanisms of pathogenicity of the banana pathogen, Fusarium oxysporum f.sp. cubense (2017) (0)
- 2 Traditional Breeding 4.2.1 Formulation of Breeding Goals (2011) (0)
- Skim Based Genotyping by Sequencing in Complex Crop Genomes (2013) (0)
- Constructing improved chickpea genome assemblies using skimGBS (2017) (0)
- Identification of a Major QTL-Controlling Resistance to the Subtropical Race 4 of Fusarium oxysporum f. sp. cubense in Musa acuminata ssp. malaccensis (2023) (0)
- Towards the genome sequence of pea : a tribute to Mendel (2016) (0)
- 4.3.1 Black Leg Resistance (2011) (0)
- Title: Scanning ethyl methanesulphonate effects on the whole genome of Lotus japonicus using second generation sequencing analysis Authors: (2015) (0)
- Genome-Wide Identification, Expression and Functional Analysis Reveal the Involvement of FCS-Like Zinc Finger Gene Family in Submergence Response in Rice (2021) (0)
- Candidate Rlm6 resistance genes against Leptosphaeria. maculans identified through a genome-wide association study in Brassica juncea (L.) Czern (2021) (0)
- Resequencing of 429 chickpea accessions from 45 countries provides insights into genome diversity, domestication and agronomic traits (2019) (0)
- Second generation sequencing and analysis of complex genomes (2011) (0)
- Isolation and Sequencing of Chromosome Arm 7RS of Rye, Secale cereale (2022) (0)
- Accessing Integrated Brassica (2005) (0)
- A comparison of three genotype structures for 686 lines derived from pedigrees (COP), 1400 DArT markers and 420,000 data points from 25 Years of CIMMYT international bread wheat trials (2008) (0)
- High resolution skim genotyping by sequencing reveals the distribution of crossovers and gene conversions in chickpea and canola (2016) (0)
- Association of Copy Number Variation with Qualitative and Quantitative Resistance against Leptosphaeria maculans in Brassica napus (2016) (0)
- Bioinformatics and plant breeding. (2020) (0)
- Genome Assembly Validation and Trait Association using Skim Based Genotyping by Sequencing in Canola (2014) (0)
- ICRCGC: Next Generation Genomics: The Second Green Revolution for Future Food Security (2013) (0)
- Sequencing the Chickpea Genome (2017) (0)
- Improving Genome Assemblies, Assessing Structural Variation and Trait Association using Chromosome Genomics and Illumina Skim Genotyping by Sequencing (2013) (0)
- SNP discovery from amphidiploid species and transferability across the Brassicaceae (2011) (0)
- Association between phenotype and DArT markers in spring wheat using 25 years Of CIMMYT international field trial data (2008) (0)
- Daisychain: Search and Interactive Visualisation of Homologs in Genome Assemblies (2021) (0)
- Characterising the wheat genome using second generation sequencing (2011) (0)
- Genomic data from Chinese cabbage (Brassica rapa) (2011) (0)
- Comparision of expression and sequence of SnfK and DREB 2 A transcript in heat tolerant lentil genotypes (2017) (0)
- From small and simple to big and complex: what can short sequence reads tell us about genomes? (2011) (0)
- A wheat phenome atlas and phenome atlas toolbox (2008) (0)
- Genome Analysis of the Broad Host Range Necrotroph Nalanthamala psidii Highlights Genes Associated With Virulence (2022) (0)
- Amborella pangenome and supplementary tables v3 (2020) (0)
- Application of pangenomics for wheat molecular breeding. (2021) (0)
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