David J. Lipman

Q: What Schools Are Affiliated With David J. Lipman

David J. Lipman is affiliated with the following schools: Brown University, Icahn School of Medicine at Mount Sinai, Pennsylvania State University

David J. Lipman's AcademicInfluence.com Rankings

David J. Lipman

Biology

#700

World Rank

#1222

Historical Rank

#389

USA Rank

Bioinformatics

#10

World Rank

#10

Historical Rank

USA Rank

biology Degrees

Download Badge

Biology

Why Is David J. Lipman Influential?

(Suggest an Edit or Addition)

According to Wikipedia, David J. Lipman is an American biologist who from 1989 to 2017 was the director of the National Center for Biotechnology Information at the National Institutes of Health. NCBI is the home of GenBank, the U.S. node of the International Sequence Database Consortium, and PubMed, one of the most heavily used sites in the world for the search and retrieval of biomedical information. Lipman is one of the original authors of the BLAST sequence alignment program, and a respected figure in bioinformatics. In 2017, he left NCBI and became Chief Science Officer at Impossible Foods.

(See a Problem?)

David J. Lipman's Published Works

Number of citations in a given year to any of this author's works

Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author

Published Works

Basic local alignment search tool. (1990) (83318)
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. (1997) (51960)
Improved tools for biological sequence comparison. (1988) (10916)
Rapid and sensitive protein similarity searches. (1985) (3572)
A genomic perspective on protein families. (1997) (3519)
Basic local alignment search tool. Journal of Molecular Biology (1990) (2131)
The National Center for Biotechnology Information. (1990) (1440)
Rapid similarity searches of nucleic acid and protein data banks. (1983) (1298)
The Influenza Virus Resource at the National Center for Biotechnology Information (2007) (973)
A workbench for multiple alignment construction and analysis (1991) (964)
GenBank (2012) (780)
GenBank (2015) (683)
Domain enhanced lookup time accelerated BLAST (2012) (664)
CDART: protein homology by domain architecture. (2002) (656)
The multiple sequence alignment problem in biology (1988) (608)
The consensus coding sequence (CCDS) project: Identifying a common protein-coding gene set for the human and mouse genomes. (2009) (569)
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (2004) (565)
A tool for multiple sequence alignment. (1989) (538)
GenBank: update (2004) (512)
Large-scale sequencing of human influenza reveals the dynamic nature of viral genome evolution (2005) (484)
Protein database searches for multiple alignments. (1990) (472)
Whole-Genome Analysis of Human Influenza A Virus Reveals Multiple Persistent Lineages and Reassortment among Recent H3N2 Viruses (2005) (397)
Database resources of the National Center for Biotechnology Information (2020) (323)
Protein sequence similarity searches using patterns as seeds. (1998) (322)
GenBank (2017) (310)
Lineage-specific loss and divergence of functionally linked genes in eukaryotes. (2000) (306)
Splign: algorithms for computing spliced alignments with identification of paralogs (2008) (305)
Database resources of the National Center for Biotechnology Information (2018) (296)
Extracting protein alignment models from the sequence database. (1997) (276)
SKESA: strategic k-mer extension for scrupulous assemblies (2018) (265)
The universal distribution of evolutionary rates of genes and distinct characteristics of eukaryotic genes of different apparent ages (2009) (221)
GenBank (2016) (208)
GenBank (2004) (194)
GenBank (2018) (193)
Long intervals of stasis punctuated by bursts of positive selection in the seasonal evolution of influenza A virus (2006) (189)
Weights for data related by a tree. (1989) (185)
Stochastic Processes Are Key Determinants of Short-Term Evolution in Influenza A Virus (2006) (170)
Ancient conserved regions in new gene sequences and the protein databases. (1993) (169)
Bethesda Statement on Open Access Publishing (2003) (158)
The relationship of protein conservation and sequence length (2002) (153)
Modelling neutral and selective evolution of protein folding (1991) (149)
Trees, stars, and multiple biological sequence alignment (1989) (144)
Database resources of the National Center for Biotechnology Information (2007) (133)
Database resources of the National Center for Biotechnology Information (2008) (131)
A global initiative on sharing avian flu data (2006) (128)
GenBank (2007) (117)
PubMed: bridging the information gap. (2001) (113)
A community experiment with fully open and published peer review (2006) (106)
Database resources of the National Center for Biotechnology Information (2012) (100)
Making (anti)sense of non-coding sequence conservation. (1997) (95)
Comparative analysis of orthologous eukaryotic mRNAs: potential hidden functional signals. (2004) (94)
GenBank (2008) (92)
GenBank (2014) (91)
THE CONTEXT DEPENDENT COMPARISON OF BIOLOGICAL SEQUENCES (1984) (91)
Database resources of the National Center for Biotechnology Information (2011) (90)
Database resources of the National Center for Biotechnology Information (2014) (76)
On the statistical significance of nucleic acid similarities (1984) (76)
GenBank (2011) (74)
Sequential Seasonal H1N1 Influenza Virus Infections Protect Ferrets against Novel 2009 H1N1 Influenza Virus (2012) (70)
Rapidsimilarity searches ofnucleic acidandprotein databanks (1983) (70)
A Dynamic Model of Guard Cell Abscisic Acid Signaling (2006) (69)
Database resources of the National Center for Biotechnology Information (2009) (68)
Gnomon – NCBI eukaryotic gene prediction tool (2010) (66)
Contextual constraints on synonymous codon choice. (1983) (63)
Database resources of the National Center for Biotechnology Information (2005) (58)
Towards PubMed 2.0 (2017) (57)
GenBank (2010) (56)
MULTIPLE ALIGNMENT , COMMUNICATION COST , AND GRAPH MATCHING * (1992) (56)
Evolutionary Dynamics of N-Glycosylation Sites of Influenza Virus Hemagglutinin (2009) (48)
How user intelligence is improving PubMed (2018) (42)
Selection for minimization of translational frameshifting errors as a factor in the evolution of codon usage (2009) (39)
Nucleotide sequence analysis of the BALB/c murine sarcoma virus transforming gene (1985) (37)
GenBank (2005) (34)
Database resources of the National Center for Biotechnology Information (2021) (33)
Comment on "Large-Scale Sequence Analysis of Avian Influenza Isolates" (2006) (33)
Closure of the NCBI SRA and implications for the long-term future of genomics data storage (2011) (31)
GenBank (2009) (31)
Relative Contributions of Intrinsic Structural–Functional Constraints and Translation Rate to the Evolution of Protein-Coding Genes (2010) (29)
Database resources of the National Center for Biotechnology Information. (2001) (29)
Correction: Stochastic Processes Are Key Determinants of Short-Term Evolution in Influenza A Virus (2006) (24)
Interaction of silent and replacement changes in eukaryotic coding sequences (2005) (23)
Equal animals (1990) (23)
GenBank (2006) (23)
Patterns in interspecies similarity correlate with nucleotide composition in mammalian 3'UTRs. (2003) (20)
Erratum: Stochastic processes are key determinants of short-term evolution in influenza A virus (PLoS pathogens 2, 12 DOI: 10.1371/journal.ppat.0020125) (2006) (18)
Structural organization of Escherichia coli tRNAtyr gene clusters in four different transducing bacteriophages. (1979) (16)
Database resources of the National Center for Biotechnology Information (2009) (15)
Complex Patterns of Human Antisera Reactivity to Novel 2009 H1N1 and Historical H1N1 Influenza Strains (2012) (15)
Projection of seasonal influenza severity from sequence and serological data (2010) (15)
On the prediction of local patterns in cellular automata (1986) (15)
Comparative analysis of nucleic acid sequences by their general constraints. (1982) (14)
PubMed Central decentralized (2001) (10)
erb-2 Is a Potent Oncogene When overexpressed in NIH / 3 T 3 Cells (2017) (8)
The impact of open access on biomedical research (2000) (7)
Why Does a Protein’s Evolutionary Rate Vary over Time? (2013) (6)
Biology direct: celebrating 7 years of open, published peer review (2013) (6)
Differences in evolutionary pressure acting within highly conserved ortholog groups (2008) (4)
Supporting the gene expression effort (1999) (3)
PubMed Central: still on course to revolutionise biomedical publishing (2000) (3)
GenBank - a model community resource? (2001) (2)
PubMed Central decides to decentralize (2001) (2)
Hierarchical analysis of influenza A hemagglutinin gene sequences. (1982) (2)
Domain enhanced lookup time accelerated BLAST (2012) (1)
NIH funding: Agency rebuts critique (2013) (1)
A natural taxonomy of gene families from complete genomes (1997) (1)
Archeological Evidence of Parasitic Infection from the 19th Century Company Town of Fayette, Michigan (2000) (1)
Biology Direct:celebrating 7 years of open, published peer review (2013) (0)
Hierarchical analysis of inflnenza A hemagghitinin gene sequences (2005) (0)
From Genotype to Phenotype: Navigating Nature's Information Landscape at NCBI (1995) (0)
OPTICALLY ACTIVE CARBOXYLIC ACID BY Publication Classification USING ANY ONE OF THOSE ITEMIS (2017) (0)
Computing Discoveries in Molecular Biology (Abstract) (1996) (0)
Ten Years of PubMed Central (2010) (0)
Hierarchical analyi ofinfluenza Ahema tinin genesequences (1982) (0)
SKESA: strategic k-mer extension for scrupulous assemblies (2018) (0)
Restriction Endonuclease-Based Modification-Dependent Enrichment (REMoDE) of DNA for Metagenomic Sequencing (2022) (0)
Reviewer acknowledgement (2015) (0)
Parallelizing and Analyzing the Behavior of Sequence Alignment Algorithm on a Cluster of Workstations for Large Datasets (2015) (0)
An approach to phylogenomic analysis of bacterial pathogens (2011) (0)
How genes evolve 7281 Predicting reward and punishment (2009) (0)
Nucleic Acids Research Hiaarchical Analysis of Influenza a Hemagglutinin Gene Sequences (2003) (0)

This paper list is powered by the following services:

Other Resources About David J. Lipman

en.wikipedia.org

What Schools Are Affiliated With David J. Lipman?

David J. Lipman is affiliated with the following schools:

David J. Lipman's Academic­Influence.com Rankings