David Relman | Academic Influence

David Relman's AcademicInfluence.com Rankings

David Relman

Biology

#3213

World Rank

#4942

Historical Rank

#1328

USA Rank

Microbiology

#151

World Rank

#181

Historical Rank

#57

USA Rank

biology Degrees

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Biology

David Relman's Degrees

Doctorate Medicine Harvard University

Why Is David Relman Influential?

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According to Wikipedia, David Arnold Relman is an American microbiologist and the Thomas C. and Joan M. Merigan Professor in Medicine, and in Microbiology & Immunology at the Stanford University School of Medicine. His research focuses on the human microbiome and microbial ecosystem—for which he was a pioneer in the use of modern molecular methods, as well as on pathogen discovery and the genomics of host response.

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David Relman's Published Works

Number of citations in a given year to any of this author's works

Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author

Published Works

Diversity of the Human Intestinal Microbial Flora (2005) (7086)
Metagenomic Analysis of the Human Distal Gut Microbiome (2006) (4088)
Development of the Human Infant Intestinal Microbiota (2007) (2685)
The Pervasive Effects of an Antibiotic on the Human Gut Microbiota, as Revealed by Deep 16S rRNA Sequencing (2008) (2176)
Incomplete recovery and individualized responses of the human distal gut microbiota to repeated antibiotic perturbation (2010) (1924)
A new view of the tree of life (2016) (1528)
An ecological and evolutionary perspective on human–microbe mutualism and disease (2007) (1494)
The Application of Ecological Theory Toward an Understanding of the Human Microbiome (2012) (1154)
Simple statistical identification and removal of contaminant sequences in marker-gene and metagenomics data (2017) (1154)
Identification of the uncultured bacillus of Whipple's disease. (1992) (1134)
Gut Immune Maturation Depends on Colonization with a Host-Specific Microbiota (2012) (1007)
Molecular analysis of the bacterial microbiota in the human stomach. (2006) (971)
Exploring Microbial Diversity and Taxonomy Using SSU rRNA Hypervariable Tag Sequencing (2008) (938)
The agent of bacillary angiomatosis. An approach to the identification of uncultured pathogens. (1990) (924)
Sequence-based identification of microbial pathogens: a reconsideration of Koch's postulates (1996) (893)
Individuality and variation in gene expression patterns in human blood (2003) (822)
Temporal and spatial variation of the human microbiota during pregnancy (2015) (765)
Microbial Prevalence, Diversity and Abundance in Amniotic Fluid During Preterm Labor: A Molecular and Culture-Based Investigation (2008) (701)
Bacterial diversity within the human subgingival crevice. (1999) (642)
Microbiome Metagenomic Analysis of the Human Distal Gut (2009) (616)
Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications (2011) (588)
Dissecting biological “dark matter” with single-cell genetic analysis of rare and uncultivated TM7 microbes from the human mouth (2007) (570)
Enterotypes in the landscape of gut microbial community composition (2017) (561)
Bacterial diversity in the oral cavity of 10 healthy individuals (2010) (540)
Assembly of the human intestinal microbiota. (2006) (509)
Antibiotics and the gut microbiota. (2014) (495)
Stereotyped and specific gene expression programs in human innate immune responses to bacteria (2002) (447)
Time series community genomics analysis reveals rapid shifts in bacterial species, strains, and phage during infant gut colonization (2013) (426)
Prevalence and Diversity of Microbes in the Amniotic Fluid, the Fetal Inflammatory Response, and Pregnancy Outcome in Women with Preterm Pre‐Labor Rupture of Membranes (2010) (394)
Methanogenic Archaea and human periodontal disease. (2004) (369)
Recognition of a bacterial adhesin by an integrin: Macrophage CR3 (α M β 2, CD11b CD18 ) binds filamentous hemagglutinin of Bordetella pertussis (1990) (349)
Type I Interferon Suppresses Type II Interferon–Triggered Human Anti-Mycobacterial Responses (2013) (344)
Microbiology in the post-genomic era (2008) (343)
Filamentous hemagglutinin of Bordetella pertussis: nucleotide sequence and crucial role in adherence. (1989) (325)
Nasal microenvironments and interspecific interactions influence nasal microbiota complexity and S. aureus carriage. (2013) (285)
The human microbiome: ecosystem resilience and health. (2012) (283)
Distinct Distal Gut Microbiome Diversity and Composition in Healthy Children from Bangladesh and the United States (2013) (274)
Host Transmission of Salmonella enterica Serovar Typhimurium Is Controlled by Virulence Factors and Indigenous Intestinal Microbiota (2007) (263)
Bordetella pertussis, the Causative Agent of Whooping Cough, Evolved from a Distinct, Human-Associated Lineage of B. bronchiseptica (2005) (261)
Replication and refinement of a vaginal microbial signature of preterm birth in two racially distinct cohorts of US women (2017) (256)
Evidence of a robust resident bacteriophage population revealed through analysis of the human salivary virome (2011) (255)
Clades of huge phages from across Earth’s ecosystems (2019) (255)
Application of polymerase chain reaction to the diagnosis of infectious diseases. (1999) (235)
The search for unrecognized pathogens. (1999) (234)
Linking Microbial Phylogeny to Metabolic Activity at the Single-Cell Level by Using Enhanced Element Labeling-Catalyzed Reporter Deposition Fluorescence In Situ Hybridization (EL-FISH) and NanoSIMS (2008) (231)
Archaea and Their Potential Role in Human Disease (2003) (227)
Genetically dictated change in host mucus carbohydrate landscape exerts a diet-dependent effect on the gut microbiota (2013) (225)
Microbiota-Targeted Therapies: An Ecological Perspective (2012) (224)
Using DNA microarrays to study host-microbe interactions. (2000) (222)
Role of priority effects in the early-life assembly of the gut microbiota (2018) (222)
Improved Amplification of Microbial DNA from Blood Cultures by Removal of the PCR Inhibitor Sodium Polyanetholesulfonate (1998) (217)
Sequencing and analysis of the genome of the Whipple's disease bacterium Tropheryma whipplei (2003) (216)
Diagnosis and Monitoring of Whipple Disease by Polymerase Chain Reaction (1997) (214)
Acquired predisposition to mycobacterial disease due to autoantibodies to IFN-gamma. (2005) (213)
Does Blood of Healthy Subjects Contain Bacterial Ribosomal DNA? (2001) (213)
Strain-resolved community genomic analysis of gut microbial colonization in a premature infant (2010) (206)
The role of microbes in Crohn's disease. (2007) (206)
A microbial perspective of human developmental biology (2016) (204)
Molecular phylogenetic analysis of Cyclospora, the human intestinal pathogen, suggests that it is closely related to Eimeria species. (1996) (201)
Prevalence of Bacteria of Division TM7 in Human Subgingival Plaque and Their Association with Disease (2003) (199)
Rapid quantitative profiling of complex microbial populations (2006) (192)
Patterns of host genome-wide gene transcript abundance in the peripheral blood of patients with acute dengue hemorrhagic fever. (2007) (178)
Brief report: uveitis caused by Tropheryma whippelii (Whipple's bacillus) (1995) (174)
Marine mammals harbor unique microbiotas shaped by and yet distinct from the sea (2016) (169)
Exploring the potential of variola virus infection of cynomolgus macaques as a model for human smallpox. (2004) (167)
The transcriptional responses of respiratory epithelial cells to Bordetella pertussis reveal host defensive and pathogen counter-defensive strategies. (2000) (165)
Bordetella pertussis filamentous hemagglutinin: evaluation as a protective antigen and colonization factor in a mouse respiratory infection model (1990) (161)
Bordetella pertussis filamentous hemagglutinin interacts with a leukocyte signal transduction complex and stimulates bacterial adherence to monocyte CR3 (CD11b/CD18) (1994) (159)
Rhinosporidium seeberi: a human pathogen from a novel group of aquatic protistan parasites. (2000) (157)
Microbial genomics and infectious diseases. (2011) (156)
Bordetella Species Are Distinguished by Patterns of Substantial Gene Loss and Host Adaptation (2004) (147)
Filamentous Hemagglutinin of Bordetella bronchiseptica Is Required for Efficient Establishment of Tracheal Colonization (1998) (147)
Dissecting Interferon-Induced Transcriptional Programs in Human Peripheral Blood Cells (2010) (146)
Species- and Strain-Specific Control of a Complex, Flexible Regulon by Bordetella BvgAS (2006) (143)
How the host 'sees' pathogens: global gene expression responses to infection. (2000) (137)
The meaning and impact of the human genome sequence for microbiology. (2001) (132)
Metagenomic detection of phage-encoded platelet-binding factors in the human oral cavity (2010) (129)
Recognition of a bacterial adhesion by an integrin: macrophage CR3 (alpha M beta 2, CD11b/CD18) binds filamentous hemagglutinin of Bordetella pertussis. (1990) (128)
Microbiome Assembly across Multiple Body Sites in Low-Birthweight Infants (2013) (128)
The Landscape Ecology and Microbiota of the Human Nose, Mouth, and Throat. (2017) (124)
Genomewide analysis of the host response to malaria in Kenyan children. (2005) (123)
Genetic characterization of Bordetella pertussis filamentous haemagglutinin: a protein processed from an unusually large precursor (1990) (122)
New technologies, human-microbe interactions, and the search for previously unrecognized pathogens. (2002) (121)
The host response to smallpox: analysis of the gene expression program in peripheral blood cells in a nonhuman primate model. (2004) (117)
Analysis of streptococcal CRISPRs from human saliva reveals substantial sequence diversity within and between subjects over time. (2011) (109)
Single-cell sequencing provides clues about the host interactions of segmented filamentous bacteria (SFB) (2012) (108)
Multiomics modeling of the immunome, transcriptome, microbiome, proteome and metabolome adaptations during human pregnancy (2018) (106)
Probiotics, prebiotics, and the host microbiome: the science of translation (2013) (102)
Antibiotic resistance : implications for global health and novel intervention strategies : workshop summary (2010) (102)
The organism causing bacillary angiomatosis, peliosis hepatis, and fever and bacteremia in immunocompromised patients. (1991) (101)
Improving food safety through a one health approach: workshop summary. (2012) (100)
Transforming Growth Factor-&bgr; Signaling Pathway in Patients With Kawasaki Disease (2011) (98)
Metagenomic analysis with strain-level resolution reveals fine-scale variation in the human pregnancy microbiome (2018) (95)
Phylogenetic relationships among the agent of bacillary angiomatosis, Bartonella bacilliformis, and other alpha‐proteobacteria (1992) (95)
Broad-Range Bacterial Detection and the Analysis of Unexplained Death and Critical Illness (2002) (92)
Tropheryma whippelii DNA Is Rare in the Intestinal Mucosa of Patients without Other Evidence of Whipple Disease (2001) (91)
Vector-borne diseases: understanding the environmental, human health, and ecological connections. Workshop summary. (2008) (91)
Adaptations of Avian Flu Virus Are a Cause for Concern (2012) (91)
Correction: Exploring Microbial Diversity and Taxonomy Using SSU rRNA Hypervariable Tag Sequencing (2008) (89)
Investigate the origins of COVID-19 (2021) (88)
Gene-expression patterns reveal underlying biological processes in Kawasaki disease (2007) (86)
The temporal program of peripheral blood gene expression in the response of nonhuman primates to Ebola hemorrhagic fever (2007) (86)
Phylogenetic identification of uncultured pathogens using ribosomal RNA sequences. (1994) (82)
Microbial invasion of the amniotic cavity in preeclampsia as assessed by cultivation and sequence-based methods (2010) (80)
Detection and identification of previously unrecognized microbial pathogens. (1998) (78)
A spatial gradient of bacterial diversity in the human oral cavity shaped by salivary flow (2018) (77)
Microbial invasion of the amniotic cavity in pregnancies with small-for-gestational-age fetuses (2010) (76)
Significant Gene Order and Expression Differences in Bordetella pertussis Despite Limited Gene Content Variation (2006) (74)
Microbiology: Learning about who we are (2012) (73)
Microbial Forensics--"Cross-Examining Pathogens" (2002) (72)
Invasion of human respiratory epithelial cells by Bordetella pertussis: possible role for a filamentous hemagglutinin Arg-Gly-Asp sequence and alpha5beta1 integrin. (2001) (71)
The causes and impacts of neglected tropical and zoonotic diseases: opportunities for integrated intervention strategies. Workshop summary. (2011) (67)
Tracking microbial evolution in the human gut using Hi-C reveals extensive horizontal gene transfer, persistence, and adaptation (2019) (67)
Superorganisms and Holobionts (2013) (66)
Whipple's disease and Tropheryma whippelii: secrets slowly revealed. (2001) (64)
Paraffin removal from tissue sections for digestion and PCR analysis. (1999) (64)
Comparing functional genomic datasets: lessons from DNA microarray analyses of host-pathogen interactions. (2001) (63)
The identification of uncultured microbial pathogens. (1993) (63)
Single-Cell Enumeration of an Uncultivated TM7 Subgroup in the Human Subgingival Crevice (2003) (62)
Molecular characterization of Cyclospora-like organisms from baboons. (1999) (62)
The Human Microbiome and the Future Practice of Medicine. (2015) (61)
Molecular identification of cyanobacteria associated with stromatolites from distinct geographical locations. (2002) (61)
Surveillance for Unexplained Deaths and Critical Illnesses (2002) (60)
Proinflammatory and Proapoptotic Activities Associated with Bordetella pertussis Filamentous Hemagglutinin (2001) (60)
Microbiome as a tool and a target in the effort to address antimicrobial resistance (2018) (58)
Comparative Analysis of Viral Gene Expression Programs during Poxvirus Infection: A Transcriptional Map of the Vaccinia and Monkeypox Genomes (2008) (58)
Smallpox Research Activities: U.S. Interagency Collaboration, 2001 (2002) (58)
Infectious Disease Movement in a Borderless World: Workshop Summary (2010) (58)
Novel Microbial Diversity and Functional Potential in the Marine Mammal Oral Microbiome (2017) (57)
Stunned Silence: Gene Expression Programs in Human Cells Infected with Monkeypox or Vaccinia Virus (2011) (57)
Identification of uncultured microorganisms: expanding the spectrum of characterized microbial pathogens. (1992) (57)
Sequence variability in the first internal transcribed spacer region within and among Cyclospora species is consistent with polyparasitism. (2001) (57)
Transcriptional Profiling of the Iron Starvation Response in Bordetella pertussis Provides New Insights into Siderophore Utilization and Virulence Gene Expression (2011) (57)
Variation in Taxonomic Composition of the Fecal Microbiota in an Inbred Mouse Strain across Individuals and Time (2015) (56)
Multidomain analyses of a longitudinal human microbiome intestinal cleanout perturbation experiment (2017) (56)
Temporal Dynamics of the Transcriptional Response to Dengue Virus Infection in Nicaraguan Children (2012) (56)
Localization of Tropheryma whippelii rRNA in tissues from patients with Whipple's disease. (2001) (56)
Culture-negative endocarditis caused by Bartonella henselae. (1998) (55)
Comparisons of Distance Methods for Combining Covariates and Abundances in Microbiome Studies (2011) (53)
Search for Highly Conserved Viral and Bacterial Nucleic Acid Sequences Corresponding to an Etiologic Agent of Kawasaki Disease (1994) (53)
'Til death do us part': coming to terms with symbiotic relationships (2008) (53)
Growth Phase- and Nutrient Limitation-Associated Transcript Abundance Regulation in Bordetella pertussis (2006) (51)
Gain-of-function experiments: time for a real debate (2014) (50)
Molecular characterization of Bordetella bronchiseptica filamentous haemagglutinin and its secretion machinery. (2000) (49)
Microbial threat lists: obstacles in the quest for biosecurity? (2010) (48)
Long-term taxonomic and functional divergence from donor bacterial strains following fecal microbiota transplantation in immunocompromised patients (2017) (48)
Myocardial depressant effects of interleukin 6 in meningococcal sepsis are regulated by p38 mitogen-activated protein kinase* (2011) (48)
Natural‐host animal models indicate functional interchangeability between the filamentous haemagglutinins of Bordetella pertussis and Bordetella bronchiseptica and reveal a role for the mature C‐terminal domain, but not the RGD motif, during infection (2009) (48)
Lethal invasive cestodiasis in immunosuppressed patients. (2003) (47)
Comparisons of clustered regularly interspaced short palindromic repeats and viromes in human saliva reveal bacterial adaptations to salivary viruses. (2012) (45)
Cultivation of Tropheryma whipplei from cerebrospinal fluid. (2003) (45)
Gene transcript abundance profiles distinguish Kawasaki disease from adenovirus infection. (2009) (45)
Policy: Adaptations of avian flu virus are a cause for concern (2012) (44)
Bordetella pertussis infection of human monocytes inhibits antigen-dependent CD4 T cell proliferation. (1997) (43)
Lessons learned from the prenatal microbiome controversy (2021) (41)
Microbial biogeography and ecology of the mouth and implications for periodontal diseases (2019) (40)
Mechanical Instability of the Oxy-form of Sickle Haemoglobin (1973) (40)
Polymerase chain reaction—based detection of Tropheryma whippelii in central nervous system Whipple's disease (1997) (38)
Opinion: To stop the next pandemic, we need to unravel the origins of COVID-19 (2020) (37)
Modulation of the NF-κB Pathway by Bordetella pertussis Filamentous Hemagglutinin (2008) (37)
Multiomic immune clockworks of pregnancy (2020) (37)
Bordetella pertussis Infection of Primary Human Monocytes Alters HLA-DR Expression (2004) (34)
Reproducible Research Workflow in R for the Analysis of Personalized Human Microbiome Data (2016) (34)
Fungal Diseases: An Emerging Threat to Human, Animal, and Plant Health: Workshop Summary (2014) (34)
Global climate change and extreme weather events: understanding the contributions to infectious disease emergence, workshop summary. (2008) (34)
Characterization of a Highly Conserved Island in the Otherwise Divergent Bordetella holmesii and Bordetella pertussis Genomes (2006) (33)
Bioterrorism--preparing to fight the next war. (2006) (32)
Synthetic “Life,” Ethics, National Security, and Public Discourse (2010) (32)
Organization, Structure, and Variability of the rRNA Operon of the Whipple's Disease Bacterium (Tropheryma whippelii) (2000) (32)
PCR analysis of T. whippelii DNA in a case of whipple's disease: effect of antibiotics and correlation with histology (1998) (30)
Infectious agents and the etiology of chronic idiopathic diseases. (1998) (30)
Has trench fever returned? (1995) (30)
Human microbiome science: vision for the future, Bethesda, MD, July 24 to 26, 2013 (2014) (29)
Stomatococcus mucilaginosus endocarditis in an intravenous drug abuser. (1987) (29)
Bordetella bronchiseptica expresses the fimbrial structural subunit gene fimA (1997) (28)
Phase variation and microevolution at homopolymeric tracts in Bordetella pertussis (2007) (28)
Haemophilus parainfluenzae endocarditis: application of a molecular approach for identification of pathogenic bacterial species. (1994) (27)
Human microbiome science: vision for the future, (2014) (27)
Collaborative multidisciplinary workshop report: detection, culture, serology, and antimicrobial susceptibility testing of Chlamydia pneumoniae. (2000) (27)
Identification of Cardiobacterium hominis by broad-range bacterial polymerase chain reaction analysis in a case of culture-negative endocarditis. (2002) (27)
Early days: genomics and human responses to infection (2006) (25)
Cathelicidin Insufficiency in Patients with Fatal Leptospirosis (2016) (24)
Metagenomics, infectious disease diagnostics, and outbreak investigations: sequence first, ask questions later? (2013) (24)
Identification of Lactobacillus strains with probiotic features from the bottlenose dolphin (Tursiops truncatus) (2013) (23)
Role of phosphatidylinositol 3‐kinase in the binding of Bordetella pertussis to human monocytes (2002) (23)
Understanding Threats to Scientific Openness (2003) (23)
Smallpox research activities (2002) (23)
SmashCell: a software framework for the analysis of single-cell amplified genome sequences (2010) (23)
Lethal infection by a previously unrecognised metazoan parasite (1996) (23)
Limited role for PCR-based diagnosis of Whipple's disease from peripheral blood mononuclear cells (1996) (23)
Tracking microbial evolution in the human gut using Hi-C reveals extensive horizontal gene transfer, persistence and adaptation (2019) (22)
"Inconvenient truths" in the pursuit of scientific knowledge and public health. (2014) (22)
Molecular approaches for identification of infectious agents in Wegener's granulomatosis and other vasculitides. (1999) (21)
Genomic features of Bordetella parapertussis clades with distinct host species specificity (2006) (21)
Modulation of the Host Interferon Response and ISGylation Pathway by B. pertussis Filamentous Hemagglutinin (2011) (20)
Cell types of origin of the cell-free transcriptome (2022) (20)
Microbiota assembly, structure, and dynamics among Tsimane horticulturalists of the Bolivian Amazon (2019) (20)
A more systematic approach to biological risk (2015) (20)
1 – A Molecular Perspective of Microbial Pathogenicity (2015) (20)
Reduced Gut Microbiome Diversity and Metabolome Differences in Rhinoceros Species at Risk for Iron Overload Disorder (2019) (19)
Competitors versus Collaborators: Micronutrient Processing by Pathogenic and Commensal Human-Associated Gut Bacteria. (2020) (18)
Analysis of conserved non-rRNA genes of Tropheryma whipplei. (2003) (17)
Understanding health disparities (2018) (17)
The human body as microbial observatory (2002) (16)
Candidatus Mycoplasma girerdii replicates, diversifies, and co-occurs with Trichomonas vaginalis in the oral cavity of a premature infant (2017) (16)
The Human Virome: Implications for Clinical Practice in Transplantation Medicine (2017) (16)
Treatment-Specific Composition of Gut Microbiota Is Associated with Disease Remission in a Pediatric Crohn’s Disease Cohort (2018) (16)
Emerging infections and newly-recognised pathogens. (1997) (15)
Pox: An American history (2011) (15)
The Domestic and International Impacts of the 2009-H1N1 Influenza A Pandemic: Global Challenges, Global Solutions: Workshop Summary (2010) (15)
How Bacterial Communities Expand Functional Repertoires (2006) (15)
Creating a mammalian-transmissible A/H5N1 influenza virus: social contracts, prudence, and alternative perspectives. (2012) (15)
Poverty and Community-Acquired Antimicrobial Resistance with Extended-Spectrum β-Lactamase–Producing Organisms, Hyderabad, India (2018) (15)
Microbiota's 'little helpers': bacteriophages and antibiotic-associated responses in the gut microbiome (2013) (15)
Absence of Kaposi's sarcoma-associated herpesvirus DNA in bacillary angiomatosis-peliosis lesions. (1999) (14)
Childhood tuberculosis is associated with decreased abundance of T cell gene transcripts and impaired T cell function (2017) (14)
Cysteine dependence of Lactobacillus iners is a potential therapeutic target for vaginal microbiota modulation (2022) (14)
Publisher Correction: Enterotypes in the landscape of gut microbial community composition (2018) (14)
VCAM-1 Expression on CD8+ Cells Correlates with Enhanced Anti-HIV Suppressing Activity1 (2005) (14)
Genome-wide responses of a pathogenic bacterium to its host. (2002) (14)
Development of the Human Infant Intestinal (2007) (14)
Shedding light on microbial detection. (2003) (14)
The importance of individuals and scale: moving towards single cell microbiology. (2007) (14)
A BAFF/APRIL axis regulates obesogenic diet-driven weight gain (2021) (13)
The increasingly compelling moral responsibilities of life scientists. (2013) (13)
In Search of Biosecurity (2006) (13)
Comparisons of CRISPRs and viromes in human saliva reveal bacterial adaptations to salivary viruses (2012) (13)
Editorial Response: Are all Bartonella henselae Strains Created Equal? (1998) (13)
Redaction of Sensitive Data in the Publication of Dual Use Research of Concern (2013) (12)
Undernutrition—Looking Within for Answers (2013) (12)
Clostridium difficile, Aging, and the Gut: Can Microbiome Rejuvenation Keep Us Young and Healthy? (2018) (12)
Isolation of Rochalimaea species. (1993) (12)
Early Transcriptional Signatures of the Immune Response to a Live Attenuated Tetravalent Dengue Vaccine Candidate in Non-human Primates (2016) (12)
Localization of Mycobacterium avium-intracellulare within a skin lesion of bacillary angiomatosis in a patient with AIDS. (1992) (11)
The “Minimum Information about an ENvironmental Sequence” (MIENS) specification (2010) (11)
Risky Business: Meeting the Structural Needs of Transdisciplinary Science. (2017) (11)
Editing Biosecurity: Needs and Strategies for Governing Genome Editing (2018) (11)
The biosecurity benefits of genetic engineering attribution (2020) (11)
Cultivation of Whipple bacillus: the irony and the ecstasy (1997) (11)
THE SCIENCE AND APPLICATIONS OF SYNTHETIC AND SYSTEMS BIOLOGY Workshop Summary (2011) (11)
Are all Bartonella henselae strains created equal? (1998) (11)
The biological century: coming to terms with risk in the life sciences (2010) (11)
Strain-resolved community genomic analysis of gut microbial colonization in a premature infant (Proceedings of the National Academy of Sciences of the United States of America (2011) 108, 3 (1128-1133) DOI: 10.1073/pnas.1010992108) (2011) (10)
Restoration of the gut microbial habitat as a disease therapy (2013) (10)
Towards personalized medicine in maternal and child health: integrating biologic and social determinants (2020) (10)
Microbiota: A high-pressure situation for bacteria (2017) (9)
Diagnostic utility of the polymerase chain reaction in 2 cases of suspected Whipple disease. (1998) (9)
A Brave New World in the Life Sciences (2006) (8)
Early transcriptional responses after dengue vaccination mirror the response to natural infection and predict neutralizing antibody titers (2018) (8)
Mining the natural world for new pathogens. (2002) (8)
Cyclospora. (2020) (8)
Actionable sequence data on infectious diseases in the clinical workplace. (2015) (8)
Majority rules? Tallying the microbial census in an abscess by means of molecular methods. (2009) (7)
Complete Genome Sequences of Six Lactobacillus iners Strains Isolated from the Human Vagina (2020) (7)
Human developmental biology viewed from a microbial perspective (2017) (7)
Infectious Diseases Society of America and Gain-of-Function Experiments With Pathogens Having Pandemic Potential (2015) (6)
Unrest at home: diarrheal disease and microbiota disturbance (2014) (6)
Learning to appreciate our differences. (2008) (6)
A geographically-diverse collection of 418 human gut microbiome pathway genome databases (2017) (6)
Profiling of the human intestinal microbiome and bile acids under physiologic conditions using an ingestible sampling device (2022) (6)
Explaining the unexplained in clinical infectious diseases: looking forward. (1998) (6)
Microbial Genomes: Blueprints for Life (2000) (6)
The Block Bootstrap Method for Longitudinal Microbiome Data (2018) (6)
Editorial: The Whipple Bacillus Lives (Ex Vivo)! (1997) (6)
How likely is it that biological agents will be used deliberately to cause widespread harm? (2016) (5)
Population health: Immaturity in the gut microbial community (2014) (5)
Human herpesvirus 8 and sarcoidosis. (2002) (5)
Gut microbiota: How to build healthy growth-promoting gut communities (2016) (5)
Early prediction and longitudinal modeling of preeclampsia from multiomics (2022) (5)
Phylogenetic Diversity of Microbial Pathogens (1994) (4)
The 'emergence' of Bartonella and the development of molecular discovery methods for microbial pathogens. (1998) (4)
Thinking about the microbiome as a causal factor in human health and disease: philosophical and experimental considerations. (2020) (3)
Topical emollient therapy with sunflower seed oil alters the skin microbiota of young children with severe acute malnutrition in Bangladesh: A randomised, controlled study (2021) (3)
Combined use of metagenomic sequencing and host response profiling for the diagnosis of suspected sepsis (2019) (3)
Spatial patterns of dental disease in patients with low salivary flow (2021) (3)
The Whipple bacillus lives (ex vivo)! (1997) (3)
Protocols and risks: when less is more (2021) (3)
Reply to Keelan and Payne: Microbiota-related pathways for preterm birth (2015) (3)
Optimization of the 16S rRNA sequencing analysis pipeline for studying in vitro communities of gut commensals (2022) (3)
Characterizing the oral and distal gut microbiota of the threatened southern sea otter (Enhydra lutris nereis) to enhance conservation practice (2022) (3)
Dissecting Biological Dark Matter: Single Cell Genetic Analysis of TM7, a Rare and Uncultivated Microbe from the Human Mouth (2007) (3)
Previously uncharacterized rectangular bacterial structures in the dolphin mouth (2021) (3)
The Causes and Impacts of Neglected Tropical and Zoonotic Diseases - Implications for Global Health and Opportunities for Novel Intervention Strategies (2010) (3)
A brave new world in the life sciences in the life sciences ) the breadth of biological threats is much broader than commonly thought and will continue to expand. (2006) (2)
The promise of the microbiome: Function and dysfunction in humans and beyond (2014) (2)
Sequence-Based Methods for Pathogen Discovery: the Complex Associations of Microbes, Microbial Sequences, and Host (2000) (2)
Whipple's disease (1993) (2)
Bioterrorism preparedness: Would you be ready? (2002) (2)
Public health. Understanding threats to scientific openness. (2003) (2)
Images in clinical medicine. Progression of the lesion at the site of inoculation after smallpox vaccination. (2003) (2)
Bacillary angiomatosis and Rochalimaea species. (1994) (2)
Multiomics Longitudinal Modeling of Preeclamptic Pregnancies (2021) (2)
Sub-communities of the vaginal ecosystem in pregnant and non-pregnant women (2021) (2)
A robust host-response-based signature distinguishes bacterial and viral infections across diverse global populations (2022) (2)
Cross-talk in the gut (2009) (2)
Editorial overview: insights into molecular mechanisms of microbiota. (2014) (2)
A review of Lyme disease serologic diagnosis (1991) (1)
Short-Term Dairy Product Elimination and Reintroduction Minimally Perturbs the Gut Microbiota in Self-Reported Lactose-Intolerant Adults (2021) (1)
Strategies for understanding dynamic, personalized profiles of host-derived proteins and microbes from human stool (2019) (1)
On Defining Global Catastrophic Biological Risks (2017) (1)
EDITORIAL MINING THE NATURAL WORLD FOR NEW PATHOGENS (2002) (1)
Systems Biology Strategies and Technologies for Understanding Microbes and Microbial Communities Genomic and Proteomic Strategies GTL Profiling Microbial Identity and Activity : Novel Applications of NanoSIMS and High Density Microarrays (2009) (1)
Section 3 update: Use of Cloned Artificial Targets for FISH (catFISH) for the optimization of oligonucleotide probe hybridization conditions with 16S rRNA clones for in situ quantification of uncultivated prokaryotic cells (2004) (1)
Deconstructing the role of iron and heme in the structure of healthy human gut microbial communities (2022) (1)
Teles Anti-Mycobacterial Responses Triggered Human − Type I Interferon Suppresses Type II Interferon (2013) (1)
Metagenomics, Infectious Disease Diagnostics, and Outbreak Investigations (2013) (1)
Plague: What you need to know now (2006) (1)
postulates.a reconsideration of Koch's Sequence-based identification of microbial (2014) (1)
Microbiota's 'little helpers': bacteriophages and antibiotic-associated responses in the gut microbiome (2013) (1)
The infectious aetiology of disease: the search for new agents (2005) (1)
Understanding how biologic and social determinants affect disparities in preterm birth and outcomes of preterm infants in the NICU. (2021) (1)
Radiologic features of a fatal platyhelminth (tapeworm) infection in an AIDS patient. (1998) (1)
Early Elements of a Pipeline for Single Bacterial Cell Genomics. (2011) (1)
Unraveling the Role of the Gut Microbiome in Iron‐Deficiency Anemia During Pregnancy (2020) (1)
Maternal IgA: Matchmaking in Early Childhood. (2019) (1)
Smallpox: A Brief Overview (2002) (1)
Editing Biosecurity: Needs and Strategies for Governing Genome Editing, Executive Summary (2018) (1)
The human indigenous microbiota (2010) (1)
GutCyc: a Multi-Study Collection of Human Gut Microbiome Metabolic Models (2016) (1)
Unrest at home: diarrheal disease and microbiota disturbance (2014) (1)
Diversity of Human Microbial Pathogens and Commensals (2008) (0)
Microbial community-wide effects of antibiotics (2014) (0)
Precise genotyping of circular mobile elements uncovers human associated plasmids with surprisingly recent common ancestors (2021) (0)
Simple statistical identification and removal of contaminant sequences in marker-gene and metagenomics data (2018) (0)
Correction: Cathelicidin Insufficiency in Patients with Fatal Leptospirosis (2017) (0)
Correlates with Enhanced Anti-HIV Cells + VCAM-1 Expression on CD 8 (2005) (0)
The Role of Infectious Agents in Inflammatory Bowel Disease (2005) (0)
January 2004 (2004) (0)
Multiomic immune clockworks of pregnancy (2020) (0)
Microbes, Infectious Disease, and the Future of Medicine (2016) (0)
Bordetella pertussis filamentous hemagglutinin induces nuclear translocation of RelB/p52 in U-937 macrophages (135.24) (2009) (0)
[A brave new world in the life sciences] (2006) (0)
Title: Multiomics Longitudinal Modeling of Preeclamptic Pregnancies (2021) (0)
Plenary sessions P1 CLOSING THE AUDIT LOOP. OUTCOME OF SECOND NATIONAL AUDIT OF THE MANAGEMENT OF ACUTE ITP—A CHANGE IN PRACTICE (2002) (0)
A spatial gradient of bacterial diversity in the human oral cavity shaped by salivary flow (2018) (0)
Motivating Proactive Biorisk Management (2023) (0)
Forum on Microbial Threats (2018) (0)
Publisher Correction: Cell types of origin of the cell-free transcriptome (2022) (0)
Strengthen oversight of risky research on pathogens (2022) (0)
Candidatus Mycoplasma girerdii replicates, diversifies, and co-occurs with Trichomonas vaginalis in the oral cavity of a premature infant (2017) (0)
Integration of Next–Generation Sequencing, Viral Sequencing, and Host-Response Profiling for the Diagnosis of Acute Infections (2017) (0)
RESEARCH H IGHLIGHT (2013) (0)
Disease Archaea and Their Potential Role in Human (2003) (0)
The moral and societal responsibilities of biologists during times of revolution (2018) (0)
Editorial for Special Issue: Insights into Molecular Mechanisms of Microbiota. (2014) (0)
Gardnerella Diversity and Ecology in Pregnancy and Preterm Birth (2023) (0)
New Game, New Rules (2015) (0)
Public Health/Epidemiology (2006) (0)
Presumed Guilt in the Anthrax Case—Response (2012) (0)
Influential factors of saliva microbiota composition (2021) (0)
Bacterial Ribosomal DNA ? Does Blood of Healthy Subjects Contain (2001) (0)
Host Genotype Links to Salivary and Gut Microbiota by Periodontal Status (2022) (0)
The Growing Tension Between Openness and Risk in the Life Sciences (2014) (0)
Publisher Correction: Enterotypes in the landscape of gut microbial community composition (2018) (0)
Lessons learned from the prenatal microbiome controversy (2021) (0)
PATHOGEN-SPECIFIC FEATURES OF THE HUMAN PERIPHERAL BLOOD TRANSCRIPTIONAL PROFILE IN PATIENTS WITH SCRUB TYPHUS AND MURINE TYPHUS (2015) (0)
UniFrac and double principal coordinates analysis (2012) (0)
February 2004 (2004) (0)
Building a better virus trap. (2007) (0)
Tularemia: A Brief Overview (2002) (0)
Human microbiome science (2014) (0)
Corrigendum to “Sequence variability in the first internal transcribed spacer region within and among Cyclospora species is consistent with polyparasitism” [Int. J. Parasitol. 31 (2001) 1475–1487] (2002) (0)
Clades of huge phages from across Earth’s ecosystems (2020) (0)
Postnatal assembly of microbial communities across multiple body habitats in low birthweight infants (2011) (0)
2014 Editors' choice (2014) (0)
Erratum: Transforming growth factor-β signaling pathway in patients with Kawasaki disease (Circulation: Cardiovascular Genetics (2011) 4 (16-25)) (2011) (0)
Pathologic Approach to the Diagnosis of Infectious Causes of Pulmonary Hemorrhage and Acute Respiratory Distress Syndrome (2019) (0)
Fiber hemagglutinin of b. pertussis (1989) (0)
The Human Microbiome, Environmental Arsenic Exposure, and Human Health (2014) (0)
Lactacidemia in Asymptomatic HIV–Infected Subjects Receiving Nucleoside Reverse-Transcriptase Inhibitors (2010) (0)
Molecular Phylogenetic Analysis (2011) (0)
Who Are We? Explorations of the Human Indigenous Microbiota (2007) (0)
Human microbiome science: vision for the future, Bethesda, MD, July 24 to 26, 2013 (2014) (0)
GTL PI meeting 2009 Abstracts-Genomic and Proteomic Strategies (2009) (0)
Patterns of Microbial Diversity Within the Human Microbiome (and Why It Matters) (2009) (0)
Bacterial Pathogenesis and the Microbiome (2015) (0)
Transcriptional Proﬁling of the Iron Starvation Response in Bordetella pertussis Provides New Insights into Siderophore Utilization and Virulence Gene Expression (cid:1) § (2011) (0)
What Goes Around, Comes Around: Antibiotic Resistance in Animals, Food, and People (2015) (0)
Sequencing and analysis of the genome of the Whipple's disease bacterium Tropheryma whipplei. Commentary (2003) (0)
Myocardial depressant effects of Interleukin 6 in meningococcal sepsis are regulated by p38MAPK (2011) (0)
Antibiotics, the Microbiome and Non-Infectious Consequences (2015) (0)
Ricin and staphylococcal enterotoxin B: Potential biologic weapons (2006) (0)
in press-uncorrected proof Microbial invasion of the amniotic cavity in pregnancies with small-for-gestational-age fetuses (2010) (0)
Protocols and risks: when less is more (2021) (0)
llCROBlAL GENOMES: BLUEPRINTS FOR LIFE (2004) (0)
Cysteine dependence of Lactobacillus iners is a potential therapeutic target for vaginal microbiota modulation (2022) (0)
Have We “Met the Enemy”? (2012) (0)
The importance of influenza vaccination. (2014) (0)
The infectious aetiology of disease (2005) (0)
Diagnostic methods for Cyclospora (1998) (0)
Gene expression programs in adults with acute dengue infections (2006) (0)
A role for mucin in Bordetella pertussis pathogenesis is revealed in the transcriptional profile of infected human bronchial epithelial cells (2000) (0)
Differential NF-kappaB Responses Induced by Bordetella Pertussis Filamentous-Hemagglutinin (FHA) in Macrophages and Bronchial Epithelial Cells (2007) (0)
The Use of Genomics for the Early Diagnosis of Scrub Typhus and Other Systemic Infectious Diseases (2008) (0)
535: A molecular investigation of the microbial diversity and burden in preterm PROM reveals a high rate of infection with a broad range of organisms including gastrointestinal tract microbiota (2009) (0)
Biological engineering, risk, and uncertainty. (2014) (0)
The human microbiome (2018) (0)
Longitudinal dynamics of the human vaginal ecosystem across the reproductive cycle (2022) (0)
Precise genotyping of circular mobile elements from metagenomic data uncovers human-associated plasmids with recent common ancestors (2022) (0)
The impact of iron and heme availability on the healthy human gut microbiome in vivo and in vitro. (2023) (0)
Gene-expression patterns reveal underlying biological processes inKawasaki disease (2007) (0)
Enterotypes in the landscape of gut microbial community composition (2017) (0)
Faculty Opinions recommendation of Gene expression in Pseudomonas aeruginosa biofilms. (2002) (0)

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