David S. Wishart
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Canadian bioinformatician
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David S. Wishartbiology Degrees
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Biochemistry
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Biology
Why Is David S. Wishart Influential?
(Suggest an Edit or Addition)According to Wikipedia, David S. Wishart is a Canadian researcher and a Distinguished University Professor in the Department of Biological Sciences and the Department of Computing Science at the University of Alberta. Wishart also holds cross appointments in the Faculty of Pharmacy and Pharmaceutical Sciences and the Department of Laboratory Medicine and Pathology in the Faculty of Medicine and Dentistry. Additionally, Wishart holds a joint appointment in metabolomics at the Pacific Northwest National Laboratory in Richland, Washington. Wishart is well known for his pioneering contributions to the fields of protein NMR spectroscopy, bioinformatics, cheminformatics and metabolomics. In 2011, Wishart founded the Metabolomics Innovation Centre , which is Canada's national metabolomics laboratory.
David S. Wishart's Published Works
Number of citations in a given year to any of this author's works
Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- DrugBank 5.0: a major update to the DrugBank database for 2018 (2017) (4226)
- DrugBank: a comprehensive resource for in silico drug discovery and exploration (2005) (2961)
- MetaboAnalyst 4.0: towards more transparent and integrative metabolomics analysis (2018) (2684)
- HMDB 3.0—The Human Metabolome Database in 2013 (2012) (2627)
- HMDB: the Human Metabolome Database (2007) (2527)
- MetaboAnalyst 3.0—making metabolomics more meaningful (2015) (2392)
- HMDB 4.0: the human metabolome database for 2018 (2017) (2386)
- DrugBank: a knowledgebase for drugs, drug actions and drug targets (2007) (2303)
- PHASTER: a better, faster version of the PHAST phage search tool (2016) (2236)
- The chemical shift index: a fast and simple method for the assignment of protein secondary structure through NMR spectroscopy. (1992) (1917)
- The 13C Chemical-Shift Index: A simple method for the identification of protein secondary structure using 13C chemical-shift data (1994) (1900)
- 1H, 13C and 15N chemical shift referencing in biomolecular NMR (1995) (1891)
- DrugBank 4.0: shedding new light on drug metabolism (2013) (1788)
- DrugBank 3.0: a comprehensive resource for ‘Omics’ research on drugs (2010) (1749)
- PHAST: A Fast Phage Search Tool (2011) (1747)
- HMDB: a knowledgebase for the human metabolome (2008) (1722)
- Relationship between nuclear magnetic resonance chemical shift and protein secondary structure. (1991) (1585)
- MetaboAnalyst: a web server for metabolomic data analysis and interpretation (2009) (1546)
- The Human Serum Metabolome (2011) (1374)
- Using MetaboAnalyst 4.0 for Comprehensive and Integrative Metabolomics Data Analysis (2019) (1365)
- Heatmapper: web-enabled heat mapping for all (2016) (1344)
- Using MetaboAnalyst 3.0 for Comprehensive Metabolomics Data Analysis (2016) (1308)
- MetaboAnalyst 2.0—a comprehensive server for metabolomic data analysis (2012) (1116)
- Phenol-Explorer: an online comprehensive database on polyphenol contents in foods (2010) (1091)
- The Human Urine Metabolome (2013) (1060)
- Applications of Machine Learning in Cancer Prediction and Prognosis (2006) (959)
- Web-based inference of biological patterns, functions and pathways from metabolomic data using MetaboAnalyst (2011) (886)
- Chemical shifts as a tool for structure determination. (1994) (865)
- Emerging applications of metabolomics in drug discovery and precision medicine (2016) (864)
- Circular genome visualization and exploration using CGView (2005) (799)
- 1H, 13C and 15N random coil NMR chemical shifts of the common amino acids. I. Investigations of nearest-neighbor effects (1995) (797)
- VADAR: a web server for quantitative evaluation of protein structure quality (2003) (769)
- Translational biomarker discovery in clinical metabolomics: an introductory tutorial (2012) (725)
- SuperPose: a simple server for sophisticated structural superposition (2004) (625)
- Escherichia coli K-12: a cooperatively developed annotation snapshot—2005 (2006) (605)
- The future of NMR-based metabolomics. (2017) (593)
- Metabolomics: applications to food science and nutrition research (2008) (580)
- MetPA: a web-based metabolomics tool for pathway analysis and visualization (2010) (580)
- Phenol-Explorer 3.0: a major update of the Phenol-Explorer database to incorporate data on the effects of food processing on polyphenol content (2013) (555)
- SHIFTX2: significantly improved protein chemical shift prediction (2011) (553)
- ClassyFire: automated chemical classification with a comprehensive, computable taxonomy (2016) (548)
- MSEA: a web-based tool to identify biologically meaningful patterns in quantitative metabolomic data (2010) (540)
- Quantitative metabolomics using NMR (2008) (535)
- Mass-spectrometry-based metabolomics: limitations and recommendations for future progress with particular focus on nutrition research (2009) (508)
- Rapid and accurate calculation of protein 1H, 13C and 15N chemical shifts (2003) (475)
- NMR Spectroscopy for Metabolomics Research (2019) (448)
- RefDB: A database of uniformly referenced protein chemical shifts (2003) (428)
- 1H, 13C and 15N random coil NMR chemical shifts of the common amino acids. I. Investigations of nearest-neighbor effects (1995) (413)
- A simple method to predict protein flexibility using secondary chemical shifts. (2005) (409)
- Metabolomics enables precision medicine: “A White Paper, Community Perspective” (2016) (389)
- The food metabolome: a window over dietary exposure. (2014) (385)
- Predicting subcellular localization of proteins using machine-learned classifiers (2004) (359)
- Use of chemical shifts in macromolecular structure determination. (2002) (352)
- METAGENassist: a comprehensive web server for comparative metagenomics (2012) (328)
- Metabolomics for Investigating Physiological and Pathophysiological Processes. (2019) (327)
- BASys: a web server for automated bacterial genome annotation (2005) (324)
- CFM-ID: a web server for annotation, spectrum prediction and metabolite identification from tandem mass spectra (2014) (320)
- Systems Biology and Multi-Omics Integration: Viewpoints from the Metabolomics Research Community (2019) (304)
- The human cerebrospinal fluid metabolome. (2008) (302)
- SMPDB 2.0: Big Improvements to the Small Molecule Pathway Database (2013) (300)
- Competitive fragmentation modeling of ESI-MS/MS spectra for putative metabolite identification (2013) (298)
- The Online Metabolic and Molecular Bases of Inherited Disease; Chapter 3.1: Metabolism and Metabolic Disease Resources on the Web, Page 1 (2007) (278)
- SMPDB: The Small Molecule Pathway Database (2009) (275)
- Transplant Glomerulopathy, Late Antibody‐Mediated Rejection and the ABCD Tetrad in Kidney Allograft Biopsies for Cause (2006) (271)
- Intermolecular transmission of superoxide dismutase 1 misfolding in living cells (2011) (262)
- PolySearch: a web-based text mining system for extracting relationships between human diseases, genes, mutations, drugs and metabolites (2008) (260)
- The Blood Exposome and Its Role in Discovering Causes of Disease (2014) (251)
- Exome Sequencing and the Management of Neurometabolic Disorders. (2016) (235)
- Advances in metabolite identification. (2011) (228)
- The CyberCell Database (CCDB): a comprehensive, self-updating, relational database to coordinate and facilitate in silico modeling of Escherichia coli (2004) (220)
- CS23D: a web server for rapid protein structure generation using NMR chemical shifts and sequence data (2008) (215)
- BioTransformer: a comprehensive computational tool for small molecule metabolism prediction and metabolite identification (2019) (212)
- An NMR approach to structural proteomics (2002) (210)
- Metabolomic Data Processing, Analysis, and Interpretation Using MetaboAnalyst (2011) (208)
- Accurate, Fully-Automated NMR Spectral Profiling for Metabolomics (2014) (207)
- Interpreting protein chemical shift data. (2011) (204)
- Microarray Analysis of Rejection in Human Kidney Transplants Using Pathogenesis‐Based Transcript Sets (2007) (201)
- Standardizing the experimental conditions for using urine in NMR-based metabolomic studies with a particular focus on diagnostic studies: a review (2014) (196)
- pE-DB: a database of structural ensembles of intrinsically disordered and of unfolded proteins (2013) (196)
- Livestock metabolomics and the livestock metabolome: A systematic review (2017) (195)
- T3DB: the toxic exposome database (2014) (195)
- Current Progress in computational metabolomics (2007) (189)
- PREDITOR: a web server for predicting protein torsion angle restraints (2006) (189)
- Applications of Metabolomics in Drug Discovery and Development (2008) (189)
- Metabolomics reveals unhealthy alterations in rumen metabolism with increased proportion of cereal grain in the diet of dairy cows (2010) (184)
- Predictive Models for Breast Cancer Susceptibility from Multiple Single Nucleotide Polymorphisms (2004) (179)
- YMDB: the Yeast Metabolome Database (2011) (170)
- The human saliva metabolome (2015) (170)
- A metabolomics approach to uncover the effects of grain diets on rumen health in dairy cows. (2012) (170)
- MetaboMiner – semi-automated identification of metabolites from 2D NMR spectra of complex biofluids (2008) (169)
- Metabolomics: The Principles and Potential Applications to Transplantation (2005) (168)
- Computational systems biology in drug discovery and development: methods and applications. (2007) (166)
- Modulation of Structure and Antibacterial and Hemolytic Activity by Ring Size in Cyclic Gramicidin S Analogs* (1996) (163)
- MyCompoundID: using an evidence-based metabolome library for metabolite identification. (2013) (162)
- CFM-ID 3.0: Significantly Improved ESI-MS/MS Prediction and Compound Identification (2019) (162)
- Databases on food phytochemicals and their health-promoting effects. (2011) (161)
- Gramicidin S is active against both gram-positive and gram-negative bacteria. (2009) (152)
- HMDB 5.0: the Human Metabolome Database for 2022 (2021) (149)
- Phenol-Explorer 2.0: a major update of the Phenol-Explorer database integrating data on polyphenol metabolism and pharmacokinetics in humans and experimental animals (2012) (148)
- INMEX—a web-based tool for integrative meta-analysis of expression data (2013) (146)
- Recommendations of the wwPDB NMR Validation Task Force. (2013) (141)
- Improved Glucose Homeostasis in Obese Mice Treated With Resveratrol Is Associated With Alterations in the Gut Microbiome (2016) (141)
- A review on human fecal metabolomics: Methods, applications and the human fecal metabolome database. (2018) (138)
- Improving the accuracy of protein secondary structure prediction using structural alignment (2006) (138)
- Metabolomic Fingerprint of Heart Failure with Preserved Ejection Fraction (2015) (136)
- Nutrimetabolomics: An Integrative Action for Metabolomic Analyses in Human Nutritional Studies. (2018) (135)
- CSI 3.0: a web server for identifying secondary and super-secondary structure in proteins using NMR chemical shifts (2015) (134)
- ECMDB: The E. coli Metabolome Database (2012) (126)
- Visual Explanation of Evidence with Additive Classifiers (2006) (124)
- T3DB: a comprehensively annotated database of common toxins and their targets (2009) (123)
- Multi-platform characterization of the human cerebrospinal fluid metabolome: a comprehensive and quantitative update (2012) (121)
- Towards automatic metabolomic profiling of high-resolution one-dimensional proton NMR spectra (2011) (121)
- PolySearch2: a significantly improved text-mining system for discovering associations between human diseases, genes, drugs, metabolites, toxins and more (2015) (119)
- Validation of biomarkers of food intake—critical assessment of candidate biomarkers (2018) (117)
- Cancer Metabolomics and the Human Metabolome Database (2016) (116)
- PHAST, PHASTER and PHASTEST: Tools for finding prophage in bacterial genomes (2019) (116)
- Comparison of SDS‐ and methanol‐assisted protein solubilization and digestion methods for Escherichia coli membrane proteome analysis by 2‐D LC‐MS/MS (2007) (112)
- YMDB 2.0: a significantly expanded version of the yeast metabolome database (2016) (112)
- Proteome Analyst: custom predictions with explanations in a web-based tool for high-throughput proteome annotations (2004) (111)
- Protein chemical shift analysis: a practical guide. (1998) (111)
- Recommendations and Standardization of Biomarker Quantification Using NMR-Based Metabolomics with Particular Focus on Urinary Analysis (2016) (111)
- The Organism (2013) (108)
- Myxoma virus and malignant rabbit fibroma virus encode a serpin-like protein important for virus virulence. (1990) (106)
- The Bovine Ruminal Fluid Metabolome (2013) (106)
- PlasMapper: a web server for drawing and auto-annotating plasmid maps (2004) (106)
- Metabolomics and first-trimester prediction of early-onset preeclampsia (2012) (106)
- Computational strategies for metabolite identification in metabolomics. (2009) (104)
- Application of the random coil index to studying protein flexibility (2008) (103)
- Unusual β-sheet periodicity in small cyclic peptides (1998) (102)
- The Transcriptome of the Implant Biopsy Identifies Donor Kidneys at Increased Risk of Delayed Graft Function (2007) (102)
- Identification of predictive biomarkers of disease state in transition dairy cows. (2014) (101)
- Chemical Composition of Commercial Cow's Milk. (2019) (100)
- Fecal Short-Chain Fatty Acid Variations by Breastfeeding Status in Infants at 4 Months: Differences in Relative versus Absolute Concentrations (2017) (99)
- Solution structure of carnobacteriocin B2 and implications for structure-activity relationships among type IIa bacteriocins from lactic acid bacteria. (1999) (98)
- Is Cancer a Genetic Disease or a Metabolic Disease? (2015) (98)
- NMR metabolomics: A look ahead. (2019) (96)
- ECMDB 2.0: A richer resource for understanding the biochemistry of E. coli (2015) (96)
- Current and Future Perspectives on the Structural Identification of Small Molecules in Biological Systems (2016) (93)
- Protein chemical shift analysis: a practical guide (1998) (93)
- Informatics and Data Analytics to Support Exposome-Based Discovery for Public Health. (2017) (92)
- Exposome-Explorer: a manually-curated database on biomarkers of exposure to dietary and environmental factors (2016) (91)
- Automated 1H and 13C chemical shift prediction using the BioMagResBank (1997) (91)
- The Metabolomic Profile of Umbilical Cord Blood in Neonatal Hypoxic Ischaemic Encephalopathy (2012) (89)
- Computational Prediction of Electron Ionization Mass Spectra to Assist in GC/MS Compound Identification. (2016) (89)
- Synthesis and evaluation of keto-glutamine analogues as potent inhibitors of severe acute respiratory syndrome 3CLpro. (2004) (88)
- Identification of bacteria using tandem mass spectrometry combined with a proteome database and statistical scoring. (2004) (88)
- PROSESS: a protein structure evaluation suite and server (2010) (88)
- Detailed biophysical characterization of the acid-induced PrP(c) to PrP(β) conversion process. (2011) (85)
- Minimum information about a bioactive entity (MIABE) (2011) (84)
- Pasture Feeding Changes the Bovine Rumen and Milk Metabolome (2018) (83)
- Recommended strategies for spectral processing and post-processing of 1D 1H-NMR data of biofluids with a particular focus on urine (2018) (83)
- First-trimester metabolomic detection of late-onset preeclampsia. (2013) (81)
- CEU Mass Mediator 3.0: A Metabolite Annotation Tool. (2019) (81)
- Computational approaches to metabolomics. (2010) (81)
- NMR: prediction of protein flexibility (2006) (77)
- Probing the structural determinants of type II' beta-turn formation in peptides and proteins. (2002) (76)
- Small Molecule Inhibitors of ERCC1-XPF Protein-Protein Interaction Synergize Alkylating Agents in Cancer Cells (2013) (76)
- Combining traditional dietary assessment methods with novel metabolomics techniques: present efforts by the Food Biomarker Alliance (2017) (76)
- Automated bacterial genome analysis and annotation. (2006) (74)
- Calculation of local water densities in biological systems: a comparison of molecular dynamics simulations and the 3D-RISM-KH molecular theory of solvation. (2011) (74)
- Impaired branched chain amino acid oxidation contributes to cardiac insulin resistance in heart failure (2019) (74)
- Microbiome and metabolome modifying effects of several cardiovascular disease interventions in apo-E−/− mice (2017) (72)
- PROTEUS2: a web server for comprehensive protein structure prediction and structure-based annotation (2008) (72)
- Identification of Novel and Known Oocyte-Specific Genes Using Complementary DNA Subtraction and Microarray Analysis in Three Different Species1 (2005) (72)
- Metabolomics Profiling of Critically Ill Coronavirus Disease 2019 Patients: Identification of Diagnostic and Prognostic Biomarkers (2020) (71)
- The RCI server: rapid and accurate calculation of protein flexibility using chemical shifts (2007) (71)
- Dynamic relationships among type IIa bacteriocins: temperature effects on antimicrobial activity and on structure of the C-terminal amphipathic alpha helix as a receptor-binding region. (2004) (70)
- Gamma-aminobutyric acid-producing lactobacilli positively affect metabolism and depressive-like behaviour in a mouse model of metabolic syndrome (2019) (69)
- CFM-ID 4.0: More Accurate ESI-MS/MS Spectral Prediction and Compound Identification. (2021) (66)
- Resolution-by-proxy: a simple measure for assessing and comparing the overall quality of NMR protein structures (2012) (66)
- Urinary Metabolomics for Noninvasive Detection of Borderline and Acute T Cell–Mediated Rejection in Children After Kidney Transplantation (2014) (66)
- Dynamic cellular automata: an alternative approach to cellular simulation. (2005) (66)
- Rapid and accurate calculation of protein 1 H , 13 C and 15 N chemical shifts (2003) (65)
- Improving Early Drug Discovery through ADME Modelling (2007) (64)
- Hair Metabolomics: Identification of Fetal Compromise Provides Proof of Concept for Biomarker Discovery (2014) (64)
- BacMap: an interactive picture atlas of annotated bacterial genomes (2004) (63)
- The Bovine Metabolome (2020) (62)
- MetATT: a web-based metabolomics tool for analyzing time-series and two-factor datasets (2011) (62)
- Validation of metabolomic models for prediction of early-onset preeclampsia. (2015) (61)
- PathBank: a comprehensive pathway database for model organisms (2019) (60)
- Herbs and Spices- Biomarkers of Intake Based on Human Intervention Studies – A Systematic Review (2019) (59)
- NMR spectroscopy and protein structure determination: applications to drug discovery and development. (2005) (59)
- Virtual Screening and Biological Evaluation of Inhibitors Targeting the XPA-ERCC1 Interaction (2012) (59)
- GeNMR: a web server for rapid NMR-based protein structure determination (2009) (58)
- DrugBank and its relevance to pharmacogenomics. (2008) (58)
- A scheme for a flexible classification of dietary and health biomarkers (2017) (58)
- SEQSEE: a comprehensive program suite for protein sequence analysis (1994) (58)
- GC-MS Metabolomics Identifies Metabolite Alterations That Precede Subclinical Mastitis in the Blood of Transition Dairy Cows. (2017) (57)
- Metabolomics in monitoring kidney transplants (2006) (57)
- Learning to predict cancer-associated skeletal muscle wasting from 1H-NMR profiles of urinary metabolites (2011) (56)
- Vl-linker-Vh orientation-dependent expression of single chain Fv-containing an engineered disulfide-stabilized bond in the framework regions. (1995) (56)
- Application of solid phase peptide synthesis to engineering PEO–peptide block copolymers for drug delivery (2003) (55)
- Analogues of bacteriocins: antimicrobial specificity and interactions of leucocin A with its enantiomer, carnobacteriocin B2, and truncated derivatives. (2000) (54)
- SPLASH, a hashed identifier for mass spectra (2016) (54)
- Simulations of Interdigitated Electrode Interactions with Gold Nanoparticles for Impedance-Based Biosensing Applications (2015) (52)
- International Ring Trial of a High Resolution Targeted Metabolomics and Lipidomics Platform for Serum and Plasma Analysis. (2019) (52)
- Clinical phenotype clustering in cardiovascular risk patients for the identification of responsive metabotypes after red wine polyphenol intake. (2016) (51)
- CAMRA: Chemical shift based computer aided protein NMR assignments (1998) (50)
- Computational Systems Biology in Cancer: Modeling Methods and Applications (2007) (50)
- Perspective: Dietaryiomarkers of Intake and Exposure-Exploration with Omics Approaches. (2019) (50)
- CSI 2.0: a significantly improved version of the Chemical Shift Index (2014) (50)
- Guidelines for Biomarker of Food Intake Reviews (BFIRev): how to conduct an extensive literature search for biomarker of food intake discovery (2018) (49)
- Bioinformatics in Drug Development and Assessment (2005) (49)
- Structural domains and main-chain flexibility in prion proteins. (2009) (48)
- Human Metabolome Database: completing the 'human parts list'. (2007) (48)
- Exploring Human Metabolites Using the Human Metabolome Database (2009) (48)
- Fecal transplant from resveratrol-fed donors improves glycaemia and cardiovascular features of the metabolic syndrome in mice. (2018) (48)
- Epidemiology and costs associated with norovirus outbreaks in NHS Lothian, Scotland 2007-2009. (2011) (48)
- Metabolomic analysis for first-trimester Down syndrome prediction. (2013) (47)
- MovieMaker: a web server for rapid rendering of protein motions and interactions (2005) (46)
- Development of a Novel Virtual Screening Cascade Protocol to Identify Potential Trypanothione Reductase Inhibitors (2009) (46)
- Development of isotope labeling liquid chromatography mass spectrometry for mouse urine metabolomics: quantitative metabolomic study of transgenic mice related to Alzheimer's disease. (2014) (45)
- Metabolome analysis of 20 taxonomically related benzylisoquinoline alkaloid-producing plants (2015) (45)
- Accurate prediction of protein torsion angles using chemical shifts and sequence homology (2006) (44)
- Use of Proteinase K Nonspecific Digestion for Selective and Comprehensive Identification of Interpeptide Cross-links: Application to Prion Proteins* (2012) (44)
- nmrML: A Community Supported Open Data Standard for the Description, Storage, and Exchange of NMR Data. (2018) (43)
- Association thermodynamics and conformational stability of beta-sheet amyloid beta(17-42) oligomers: effects of E22Q (Dutch) mutation and charge neutralization. (2010) (43)
- A sensitive, high-throughput LC-MS/MS method for measuring catecholamines in low volume serum. (2018) (42)
- Metabolomic prediction of fetal congenital heart defect in the first trimester. (2014) (41)
- Hydration effects on the HET-s prion and amyloid-beta fibrillous aggregates, studied with three-dimensional molecular theory of solvation. (2008) (41)
- Metabolomics: a complementary tool in renal transplantation. (2008) (40)
- CypReact: A Software Tool for in Silico Reactant Prediction for Human Cytochrome P450 Enzymes (2018) (40)
- Proteomics and the Human Metabolome Project (2007) (39)
- Assessing the performance of genome-wide association studies for predicting disease risk (2019) (39)
- A probabilistic approach for validating protein NMR chemical shift assignments (2010) (39)
- Development of Ecom50 and Retention Index Models for Nontargeted Metabolomics: Identification of 1, 3-Dicyclohexylurea in Human Serum by HPLC/Mass Spectrometry (2012) (39)
- Artificial intelligence and amniotic fluid multiomics: prediction of perinatal outcome in asymptomatic women with short cervix (2019) (38)
- Unraveling the unknown areas of the human metabolome: the role of infrared ion spectroscopy (2018) (38)
- Metabolomic determination of pathogenesis of late-onset preeclampsia (2017) (38)
- Characterization of biopharmaceuticals by NMR spectroscopy (2013) (37)
- 3D-RISM-Dock: A New Fragment-Based Drug Design Protocol. (2012) (37)
- NMR Exchange Format: a unified and open standard for representation of NMR restraint data (2015) (37)
- Metabolic signatures of Huntington's disease (HD): (1)H NMR analysis of the polar metabolome in post-mortem human brain. (2016) (37)
- Metabotyping reveals distinct metabolic alterations in ketotic cows and identifies early predictive serum biomarkers for the risk of disease (2017) (37)
- Recommendations for standardizing nomenclature for dietary (poly)phenol catabolites (2020) (36)
- Edible nuts deliver polyphenols and their transformation products to the large intestine: An in vitro fermentation model combining targeted/untargeted metabolomics. (2019) (36)
- Discovery of Small Molecule Inhibitors that Interact with γ‐Tubulin (2012) (36)
- MarkerDB: an online database of molecular biomarkers (2020) (36)
- Prediction of skeletal muscle and fat mass in patients with advanced cancer using a metabolomic approach. (2012) (35)
- PAMDB: a comprehensive Pseudomonas aeruginosa metabolome database (2017) (35)
- Metabolite profiling and expression analysis of flavonoid, vitamin C and tocopherol biosynthesis genes in the antioxidant-rich sea buckthorn (Hippophae rhamnoides L.). (2015) (34)
- PA-GOSUB: a searchable database of model organism protein sequences with their predicted Gene Ontology molecular function and subcellular localization (2004) (34)
- Metabolic Profile of Ex Vivo Lung Perfusate Yields Biomarkers for Lung Transplant Outcomes (2018) (34)
- Transcriptional Response Of E. coli Upon FimH-mediated Fimbrial Adhesion (2010) (34)
- A simple method to adjust inconsistently referenced 13C and 15N chemical shift assignments of proteins (2005) (34)
- NMR solution structure of the precursor for carnobacteriocin B2, an antimicrobial peptide from Carnobacterium piscicola. (2004) (34)
- Salmonella phages and prophages: genomics, taxonomy, and applied aspects. (2015) (33)
- Dietary and health biomarkers—time for an update (2017) (33)
- The prion protein binds thiamine (2011) (33)
- Comparison of the metabolomic profiles of irritable bowel syndrome patients with ulcerative colitis patients and healthy controls: new insights into pathophysiology and potential biomarkers (2019) (32)
- Exposome-Explorer 2.0: an update incorporating candidate dietary biomarkers and dietary associations with cancer risk (2019) (32)
- Molecular signatures of end-stage heart failure. (2011) (32)
- Improving early drug discovery through ADME modelling: an overview. (2007) (31)
- Developing Trends in Aptamer-Based Biosensor Devices and Their Applications (2014) (31)
- Metformin and Dipeptidase Peptidyl-4 Inhibitor Differentially Modulate the Intestinal Microbiota and Plasma Metabolome of Metabolically Dysfunctional Mice. (2020) (31)
- Using DrugBank for In Silico Drug Exploration and Discovery (2016) (30)
- Biomarker of food intake for assessing the consumption of dairy and egg products (2018) (30)
- Development and Validation of a High-Throughput Mass Spectrometry Based Urine Metabolomic Test for the Detection of Colonic Adenomatous Polyps (2017) (30)
- Genomic sequence and activity of KS10, a transposable phage of the Burkholderia cepacia complex (2008) (30)
- Shaking Alone Induces De Novo Conversion of Recombinant Prion Proteins to β-Sheet Rich Oligomers and Fibrils (2014) (29)
- A simple method to measure protein side-chain mobility using NMR chemical shifts. (2013) (29)
- A simple method to quantitatively measure polypeptide JHNHα coupling constants from TOCSY or NOESY spectra (1997) (29)
- Transformation of polyphenols found in pigmented gluten-free flours during in vitro large intestinal fermentation. (2019) (29)
- A High-Performing Plasma Metabolite Panel for Early-Stage Lung Cancer Detection (2020) (28)
- PepTool™ and GeneTool™: (2000) (28)
- Chemical language models enable navigation in sparsely populated chemical space (2021) (28)
- Lipopolysaccharide induced conversion of recombinant prion protein (2014) (27)
- In silico identification of genes in bacteriophage DNA. (2009) (27)
- Defects in fatty acid amide hydrolase 2 in a male with neurologic and psychiatric symptoms (2015) (27)
- Magnetic Resonance Diagnostics: A New Technology for High-Throughput Clinical Diagnostics (2001) (27)
- Biospider: A Web Server for Automating Metabolome Annotations (2006) (26)
- FOBI: an ontology to represent food intake data and associate it with metabolomic data (2020) (26)
- The application of composite pulses to surface-coil NMR (1986) (26)
- Inter-Laboratory Robustness of Next-Generation Bile Acid Study in Mice and Humans: International Ring Trial Involving 12 Laboratories. (2016) (26)
- Constrained multiple sequence alignment using XALIGN (1994) (26)
- Metabolomic profiling of the excretory–secretory products of hookworm and whipworm (2019) (25)
- Urinary Metabolomics for Noninvasive Detection of Antibody-Mediated Rejection in Children After Kidney Transplantation (2017) (25)
- Metabolomics Approach Reveals Altered Plasma Amino Acid and Sphingolipid Profiles Associated with Patholological State in Transition Dairy Cows (2015) (25)
- Functionalized gold nanoparticle-enhanced competitive assay for sensitive small-molecule metabolite detection using surface plasmon resonance. (2017) (25)
- NMR solution structures of the apo and peptide-inhibited human rhinovirus 3C protease (Serotype 14): structural and dynamic comparison. (2007) (25)
- Identification of a novel archaebacterial thioredoxin: determination of function through structure. (2002) (25)
- Unraveling the meaning of chemical shifts in protein NMR. (2017) (25)
- Chapter 3: Small Molecules and Disease (2012) (25)
- Insights into origins and function of the unexplored majority of the reductive dehalogenase gene family as a result of genome assembly and ortholog group classification. (2020) (24)
- Diagnosis of inborn errors of metabolism using 1H NMR spectroscopic analysis of urine (1999) (24)
- Sildenafil Therapy Normalizes the Aberrant Metabolomic Profile in the Comt−/− Mouse Model of Preeclampsia/Fetal Growth Restriction (2015) (24)
- From birth to overweight and atopic disease: multiple and common pathways of the infant gut microbiome. (2020) (24)
- Nano-Optomechanical Systems for Gas Chromatography. (2016) (24)
- Acylcarnitines: Nomenclature, Biomarkers, Therapeutic Potential, Drug Targets, and Clinical Trials (2022) (23)
- Comparative analysis of essential collective dynamics and NMR-derived flexibility profiles in evolutionarily diverse prion proteins (2011) (23)
- Pathways with PathWhiz (2015) (23)
- An improved method to detect correct protein folds using partial clustering (2013) (23)
- Using multiple structural proteomics approaches for the characterization of prion proteins. (2013) (23)
- A Comprehensive Targeted Metabolomic Assay for Urine Analysis. (2020) (22)
- Prediction of genetic structure in eukaryotic DNA using reference point logistic regression and sequence alignment (2000) (22)
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- Erratum to Residue-specific mobility changes in soluble oligomers of the prion protein define regions involved in aggregation, BBAPAP (2018) 982-988. (2018) (0)
- Molecular interactions between monoclonal oligomer-specific antibody 5E3 and its amyloid beta cognates (2020) (0)
- A16 FOLLOWING AN ANTI-INFLAMMATORY DIET PREVENTS INCREASES OF FECAL CALPROTECTIN AND ALTERS METABOLOMIC PROFILE OF ULCERATIVE COLITIS PATIENTS, A RANDOMIZED CONTROLLED TRIAL (2018) (0)
- 616 Metabolomic Profiling Differentiates Irritable Bowel Syndrome Patients From Healthy Controls and Ulcerative Colitis Patients (2016) (0)
- NMR Structure of the Apo Human Rhinovirus 3C Protease (serotype 14) (2006) (0)
- Syrian hamster prion protein with thiamine (2011) (0)
- NMR ASSIGNMENT OF MTH0776 FROM METHANOBACTERIUM THERMOAUTOTROPHICUM STRAIN H (2005) (0)
- The Proteome Analyst Suite of Automated Function Prediction Tools (2005) (0)
- Metabolomic Fingerprint of Behavioral Changes in Response to Full-Spectrum Cannabis Extracts (2022) (0)
- Non-Invasive Diagnosis of Renal Allograft Inflammation Using Quantitative Urine Metabolomics: 2130 (2012) (0)
- Accessible surface area from NMR chemical shifts (2015) (0)
- Metallotyping of ketotic dairy cows reveals major alterations preceding, associating, and following the disease occurrence (2017) (0)
- Urinary Organic Acids Increase After Clinical Stabilization of Hospitalized Children With Severe Acute Malnutrition (2019) (0)
- Modeling Tools for Cancer Systems Biology (2010) (0)
- A robust algorithm for optimizing protein structures with NMR chemical shifts (2015) (0)
- A Proteomic Approach for Identification of Bacteria Using Tandem Mass Spectrometry Combined With a Translatome Database and Statistical Scoring (2005) (0)
- Combination of mouse prion protein with detoxified lipopolysaccharide triggers colon genes related to inflammatory, antibacterial, and apoptotic responses. (2022) (0)
- Metabotyping reveals distinct metabolic alterations in ketotic cows and identifies early predictive serum biomarkers for the risk of disease (2017) (0)
- Age and sex determine conversion from immediate‐release to extended‐release tacrolimus in a multi‐center cohort of Canadian pediatric renal transplant recipients (2020) (0)
- doi: 10.1093/nar/gku1004 T3DB: the toxic exposome database (2014) (0)
- Recombinant Incretin-Secreting Microbe Improves Metabolic Dysfunction in High-Fat Diet Fed Rodents (2017) (0)
- The Childhood Acute Illness and Nutrition (CHAIN) network nested case-cohort study protocol: a multi-omics approach to understanding mortality among children in sub-Saharan Africa and South Asia (2022) (0)
- [KEYNOTE] Computational Tools for the Identification of Unknowns (Video) (2018) (0)
- Basic Science and Experimental Study Molecular Signatures of End-Stage Heart Failure (2011) (0)
- 132: First-trimester metabolomics prediction of subsequent stillbirth (2016) (0)
- 235 Milk metabotyping by DI/LC-MS/MS demonstrated major alterations in metabolites related to lipid and amino acid metabolism in dairy cows affected by subclinical mastitis. (2018) (0)
- Author Correction: Recombinant Incretin-Secreting Microbe Improves Metabolic Dysfunction in High-Fat Diet Fed Rodents (2020) (0)
- Exploring Biological Impacts of Prenatal Nutrition and Selection for Residual Feed Intake on Beef Cattle Using Omics Technologies: A Review (2021) (0)
- Mo1438 URINE AND SERUM METABOLOMIC PROFILES DISCRIMINATE ULCERATIVE COLITIS PATIENTS WITH AND WITHOUT PRIMARY SCLEROSING CHOLANGITIS (2020) (0)
- University of Alberta “OMICs” Conference, June 17, 2013: Conference Program and Abstracts (2013) (0)
- A164 IDENTIFYING THE MOST IMPORTANT PREDICTORS TO CORRELATE SERUM METABOLITES WITH MRE CHANGES IN PATIENTS WITH PEDIATRIC CROHN DISEASE (2023) (0)
- Sequence Similarity and Database Searching (2003) (0)
- New metabolites of dietary terpenoids identified using in silico prediction of metabolism and high-resolution mass spectrometry (2017) (0)
- University of Alberta “OMICs” Conference, June 17, 2013: Conference Program and Abstracts (2013) (0)
- Live demonstration: Portable impedance-based biosensor system for metabolomic sensing (2016) (0)
- Iconographies supplémentaires de l'article : First-trimester metabolomic detection of late-onset preeclampsia (2012) (0)
- Development of a predictive algorithm to identify pre-school children at risk for behavior changes associated with sleep-related breathing disorders. (2022) (0)
- Metabolomics is a field of omics science (0)
- Mice Treated Subcutaneously with Mouse LPS-Converted PrPres or LPS Alone Showed Brain Gene Expression Profiles Characteristic of Prion Disease (2021) (0)
- Serum metabolomics identifies metabolite panels that differentiate lame dairy cows from healthy ones (2020) (0)
- A Canadian Study of Cisplatin Metabolomics and Nephrotoxicity (ACCENT): A Clinical Research Protocol (2021) (0)
- Session Introduction (2007) (0)
- PSXVII-35 ICP-MS based ionotyping reveals altered ionome in the serum, urine, and milk of pre-milk fever (MF), MF, and post-MF dairy cows. (2018) (0)
- NMR STRUCTURES OF OXIDIZED BACTERIOPHAGE T4 GLUTAREDOXIN (1999) (0)
- Multi-platform characterization of the human cerebrospinal fluid metabolome: a comprehensive and quantitative update (2012) (0)
- Typical 500 MHz 1 H-NMR spectra of urine from human urine. (2013) (0)
- Urine metabolic fingerprinting can be used to predict the risk of metritis and highlight the pathobiology of the disease in dairy cows (2018) (0)
- A longitudinal dataset of incidence and intervention policy impacts regarding the COVID-19 pandemic in Canadian provinces (2021) (0)
- Software Tools for Proteomics Technologies (2008) (0)
- Urine Metabolomic Biomarker Panel for Colorectal Cancer: Presidential Poster Award (2018) (0)
- Effects of amino acid intake level in pregnant pigs on plasma metabolome (643.3) (2014) (0)
- Towards a Rosetta stone for metabolomics: recommendations to overcome inconsistent metabolite nomenclature (2023) (0)
- Simulations and design of microfabricated interdigitated electrodes for use in a gold nanoparticle enhanced biosensor. (2016) (0)
- PSXVII-33 Identification of urine metabolite signatures for monitoring dairy cows for susceptibility to metritis by DI/LC-MS/MS-based metabolomics. (2018) (0)
- The Childhood Acute Illness and Nutrition (CHAIN) network nested case-cohort study protocol: a multi-omics approach to understanding mortality among children in sub-Saharan Africa and South Asia. (2022) (0)
- Noninvasive testing for mycophenolate exposure in children with renal transplant using urinary metabolomics (2022) (0)
- The plasma metabolome of long COVID-19 patients two years after infection (2023) (0)
- 52 – PROTEIN STRUCTURE PREDICTION (1990) (0)
- Mo1846 – Ulcerative Colitis (UC) Patients with Primary Sclerosing Cholangitis (PSC) Have Distinctive Serum Metabolomic Fingerprints Versus Uc Patients Without Psc (2019) (0)
- 046 Serum and urine metallotyping of preketotic and ketotic dairy cows reveals major alterations in multiple mineral elements. (2017) (0)
- Standardizing the experimental conditions for using urine in NMR-based metabolomic studies with a particular focus on diagnostic studies: a review (2014) (0)
- Effects of pregnancy status, individual animal and age of pigs on plasma metabolome (643.4) (2014) (0)
- FoodComEx: a new chemical library for food compounds and their metabolites (2015) (0)
- Herbs and Spices- Biomarkers of Intake Based on Human Intervention Studies – A Systematic Review (2019) (0)
- Personalized Nutrition Recommendations Improve Plasma Metabolite Concentrations Related to Dietary Intake (2020) (0)
- Practical Aspects of NMR-Based Metabolomics. (2022) (0)
- Solution Structure of MTH0776 from Methanobacterium thermoautotrophicum (strain H) (2005) (0)
- 1H and 15N Chemical Shift Assignments for the Syrian hamster prion protein shPrP(90-232) (2011) (0)
- Brassica villosa, a system for studying non-glandular trichomes and genes in the Brassicas (2014) (0)
- The Bovine Ruminal Fluid Metabolome (2012) (0)
- Solution structure of hemolysin expression modulating protein Hha (2001) (0)
- Proteome Analyst: An Overview (2004) (0)
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