Debasis Dash
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Computer Science
Debasis Dash's Degrees
- PhD Computer Science Stanford University
- Masters Computer Science Stanford University
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Why Is Debasis Dash Influential?
(Suggest an Edit or Addition)According to Wikipedia, Debasis Dash is an Indian computational biologist and chief scientist at the Institute of Genomics and Integrative Biology . Known for his research on proteomics and Big Data and Artificial Intelligence studies, his studies have been documented by way of a number of articles and ResearchGate, an online repository of scientific articles has listed 120 of them. The Department of Biotechnology of the Government of India awarded him the National Bioscience Award for Career Development, one of the highest Indian science awards, for his contributions to biosciences, in 2014. He is appointed as the director of Institute of Life Sciences, Bhubaneswar on 18 May 2023.
Debasis Dash's Published Works
Number of citations in a given year to any of this author's works
Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- Genetic landscape of the people of India: a canvas for disease gene exploration (2008) (254)
- Genomic characterization and epidemiology of an emerging SARS-CoV-2 variant in Delhi, India (2021) (186)
- Role of intrinsic disorder in transient interactions of hub proteins (2006) (158)
- Proteogenomic Analysis of Mycobacterium tuberculosis By High Resolution Mass Spectrometry* (2011) (137)
- The Indian Genome Variation database (IGVdb): a project overview (2005) (121)
- Integrating transcriptome and proteome profiling: Strategies and applications (2016) (109)
- Intrinsic unstructuredness and abundance of PEST motifs in eukaryotic proteomes (2005) (96)
- Transcriptome and venom proteome of the box jellyfish Chironex fleckeri (2015) (91)
- A Systematic Analysis of Eluted Fraction of Plasma Post Immunoaffinity Depletion: Implications in Biomarker Discovery (2011) (88)
- HGVbaseG2P: a central genetic association database (2008) (77)
- Intrinsic disorder in yeast transcriptional regulatory network (2007) (68)
- Open source drug discovery--a new paradigm of collaborative research in tuberculosis drug development. (2011) (65)
- Exosome-enclosed microRNAs in exhaled breath hold potential for biomarker discovery in patients with pulmonary diseases. (2013) (65)
- MassWiz: a novel scoring algorithm with target-decoy based analysis pipeline for tandem mass spectrometry. (2011) (45)
- Expression profiling of lymph nodes in tuberculosis patients reveal inflammatory milieu at site of infection (2015) (42)
- A rapid and sensitive method to detect SARS-CoV-2 virus using targeted-mass spectrometry (2020) (39)
- Role of histidine interruption in mitigating the pathological effects of long polyglutamine stretches in SCA1: A molecular approach (2003) (39)
- Spectrum of β‐thalassemia mutations and their association with allelic sequence polymorphisms at the β‐globin gene cluster in an eastern Indian population (2002) (39)
- Crowd Sourcing a New Paradigm for Interactome Driven Drug Target Identification in Mycobacterium tuberculosis (2012) (39)
- Consortium IGVThe Indian Genome Variation database (IGVdb): a project overview. Hum Genet 118:1-11 (2005) (38)
- Polyketide Quinones Are Alternate Intermediate Electron Carriers during Mycobacterial Respiration in Oxygen-Deficient Niches. (2015) (37)
- Proteogenomic Analysis of Bradyrhizobium japonicum USDA110 Using Genosuite, an Automated Multi-algorithmic Pipeline* (2013) (37)
- Integrated genomic view of SARS-CoV-2 in India (2020) (36)
- Improvement of rice plant productivity by native Cr(VI) reducing and plant growth promoting soil bacteria Enterobacter cloacae. (2020) (36)
- In silico characterization of the INO80 subfamily of SWI2/SNF2 chromatin remodeling proteins. (2004) (35)
- Western Indian Rural Gut Microbial Diversity in Extreme Prakriti Endo-Phenotypes Reveals Signature Microbes (2018) (32)
- Knowledge engineering for health: A new discipline required to bridge the “ICT gap” between research and healthcare (2012) (31)
- A web server for predicting inhibitors against bacterial target GlmU protein (2011) (31)
- Integrated Transcriptomic-Proteomic Analysis Using a Proteogenomic Workflow Refines Rat Genome Annotation* (2015) (30)
- Recent admixture in an Indian population of African ancestry. (2011) (27)
- IGVBrowser–a genomic variation resource from diverse Indian populations (2010) (27)
- Unraveling the potential of intrinsically disordered proteins as drug targets: application to Mycobacterium tuberculosis. (2009) (27)
- IndiGenomes: a comprehensive resource of genetic variants from over 1000 Indian genomes (2020) (27)
- Recapitulation of Ayurveda constitution types by machine learning of phenotypic traits (2017) (27)
- Ayurgenomics for stratified medicine: TRISUTRA consortium initiative across ethnically and geographically diverse Indian populations. (2017) (24)
- Quantitative Lipid Droplet Proteomics Reveals Mycobacterium tuberculosis Induced Alterations in Macrophage Response to Infection (2019) (23)
- Biodegradation of monocrotophos by a plant growth promoting Bacillus aryabhattai (VITNNDJ5) strain in artificially contaminated soil (2019) (23)
- Downregulation of peripheral PTGS2/COX-2 in response to valproate treatment in patients with epilepsy (2020) (21)
- Conformational flexibility may explain multiple cellular roles of PEST motifs (2006) (21)
- Dynamic α‐helices: Conformations that do not conform (2007) (20)
- Choosing an Optimal Database for Protein Identification from Tandem Mass Spectrometry Data. (2017) (20)
- Insights from a Pan India Sero-Epidemiological survey (Phenome-India Cohort) for SARS-CoV2 (2021) (20)
- Comparative Genomics of Host–Symbiont and Free-Living Oceanobacillus Species (2017) (19)
- A Novel Complexity Measure for Comparative Analysis of Protein Sequences from Complete Genomes (2003) (19)
- Telomere repeat–binding factor 2 binds extensively to extra-telomeric G-quadruplexes and regulates the epigenetic status of several gene promoters (2019) (19)
- Comparative analysis of protein unfoldedness in human housekeeping and non-housekeeping proteins (2004) (18)
- Progressive Myoclonus Epilepsy [EPM1] repeat d(CCCCGCCCCGCG)n forms folded hairpin structures at physiological pH (2001) (18)
- Location of disorder in coiled coil proteins is influenced by its biological role and subcellular localization: a GO-based study on human proteome. (2012) (18)
- Origin and Instability of GAA Repeats: Insights from Alu Elements (2002) (17)
- The phenotype and genotype experiment object model (PaGE‐OM): a robust data structure for information related to DNA variation (2009) (17)
- Spectrum of large copy number variations in 26 diverse Indian populations: potential involvement in phenotypic diversity (2011) (17)
- Conformational analysis of invariant peptide sequences in bacterial genomes. (2005) (16)
- CoPS: Comprehensive Peptide Signature Database (2004) (14)
- BioSuite: a comprehensive bioinformatics software package (A unique industry-academia collaboration) (2007) (13)
- Learning from Decoys to Improve the Sensitivity and Specificity of Proteomics Database Search Results (2012) (13)
- Discovery of rare protein‐coding genes in model methylotroph Methylobacterium extorquens AM1 (2014) (13)
- ProteoStats - a library for estimating false discovery rates in proteomics pipelines (2013) (12)
- Proteogenomics of rare taxonomic phyla: A prospective treasure trove of protein coding genes (2016) (12)
- Role of VapBC12 Toxin-Antitoxin Locus in Cholesterol-Induced Mycobacterial Persistence (2020) (12)
- Adipocyte Model of Mycobacterium tuberculosis Infection Reveals Differential Availability of Iron to Bacilli in the Lipid-Rich Caseous Environment (2018) (12)
- Data Intensive Genome Level Analysis for Identifying Novel, Non-Toxic Drug Targets for Multi Drug Resistant Mycobacterium tuberculosis (2017) (11)
- Extensive Copy Number Variations in Admixed Indian Population of African Ancestry: Potential Involvement in Adaptation (2014) (10)
- Selection of relevant features from amino acids enables development of robust classifiers (2014) (9)
- Spectrum of beta-thalassemia mutations and their association with allelic sequence polymorphisms at the beta-globin gene cluster in an Eastern Indian population. (2002) (9)
- Gene-rich large deletions are overrepresented in POAG patients of Indian and Caucasian origins. (2014) (9)
- How expression level influences the disorderness of proteins. (2008) (9)
- Consequence of chromium-tainted soil on physical and biochemical responses of Vigna radiata L. (2019) (8)
- Dynamic alpha-helices: conformations that do not conform. (2007) (8)
- Electrostatic Mis-Interactions Cause Overexpression Toxicity of Proteins in E. coli (2013) (8)
- Proteogenomic Tools and Approaches to Explore Protein Coding Landscapes of Eukaryotic Genomes. (2016) (8)
- Recognition and analysis of protein-coding genes in severe acute respiratory syndrome associated coronavirus (2004) (7)
- Exploration of NPK Activity Showing Chromium Resistant Bacteria from Sukinda Mining Area (2017) (6)
- Probing the Missing Human Proteome: A Computational Perspective. (2015) (6)
- CHARACTERIZATION OF ENDOPHYTIC BACTERIA WITH PLANT GROWTH PROMOTING ACTIVITIES ISOLATED FROM SIX MEDICINAL PLANTS (2018) (6)
- Investigating Coronary Artery Disease methylome through targeted bisulfite sequencing. (2019) (6)
- Sputum Protein Biomarkers in Airway Diseases: A Pilot Study (2021) (6)
- Suitability of Brahmi (Bacopa monnieri L.) cultivation on fly ash-amended soil for better growth and oil content (2020) (5)
- Detection, characterization and possible biofragmentation of synthetic microfibers released from domestic laundering wastewater as an emerging source of marine pollution. (2022) (5)
- The complete chloroplast genome of Dendrobium nobile, an endangered medicinal orchid from north-east India and its comparison with related Dendrobium species (2019) (5)
- Comparative Genomic Analysis of Mycobacteriaceae Reveals Horizontal Gene Transfer-Mediated Evolution of the CRISPR-Cas System in the Mycobacterium tuberculosis Complex (2021) (5)
- Cellular responses to proteostasis perturbations reveal non-optimal feedback in chaperone networks (2017) (5)
- Fusion transcripts in normal human cortex increase with age and show distinct genomic features for single cells and tissues (2020) (5)
- A machine learning-based approach to determine infection status in recipients of BBV152 (Covaxin) whole-virion inactivated SARS-CoV-2 vaccine for serological surveys (2021) (5)
- VitiVar: A locus specific database of vitiligo associated genes and variations (2019) (4)
- Pharmacogenomic landscape of COVID-19 therapies from Indian population genomes (2021) (4)
- Leveraging Structural Hierarchy for Scalable Network Comparison (2016) (4)
- High failure rate of ChAdOx1-nCoV19 immunization against asymptomatic infection in healthcare workers during a Delta variant surge (2022) (4)
- Antibacterial Activity Assessment of Native Fungus Isolated from Chromite Mines of Sukinda, Odisha (2019) (4)
- Effect Monitoring and Insights from Vaccination program of Healthcare Workforce from a tertiary level hospital in India against SARS-CoV-2. (2021) (4)
- THE MULTITUDE OF 'OMICS' AND 'OMES' : EVOLUTION OF SCIENTIFIC TERMS IN MOLECULAR BIOLOGY IN THE NEW MILLENNIUM (1999) (3)
- Erratum: Data Intensive Genome Level Analysis for Identifying Novel, Non-Toxic Drug Targets for Multi Drug Resistant Mycobacterium tuberculosis (2017) (3)
- Validation of expert system enhanced deep learning algorithm for automated screening for COVID-Pneumonia on chest X-rays (2020) (3)
- Transcriptomic Profiling of Human Limbus-Derived Stromal/Mesenchymal Stem Cells—Novel Mechanistic Insights into the Pathways Involved in Corneal Wound Healing (2022) (3)
- Whole Exome Sequencing in Healthy Individuals of Extreme Constitution Types Reveals Differential Disease Risk: A Novel Approach towards Predictive Medicine (2022) (2)
- Chaperone Network Based On Cellular Response Reveals The Non-Optimal Response To Perturbed Proteostasis (2017) (2)
- How do eubacterial organisms manage aggregation-prone proteome? (2014) (1)
- Training data of protein classifier SolubEcoli.pgc and GDP1.pgc (2014) (1)
- Possible remediation of hexavalent chromium by native fungi of Sukinda mining area: a review (2022) (1)
- False discovery rate: the Achilles' heel of proteogenomics (2022) (1)
- Genetic differences between extreme and composite constitution types from whole exome sequences reveal actionable variations (2020) (1)
- Differential Proteomic and Phospho-proteomic Analysis of Normal versus Failed Spermiation in Adult Rats by Label-Free LC-MS/MS (2013) (1)
- A High Throughput Lipidomics Method Using Scheduled Multiple Reaction Monitoring (2021) (1)
- Corrigendum to "Improvement of rice plant productivity by native Cr(VI) reducing and plant growth promoting soil bacteria Enterobacter cloacae" [Chemosphere 240 (2020) 124895]. (2019) (1)
- Possible Phytoremediation of Chlor-alkali Waste by Using Sesbania Aculeata. Pers (2012) (0)
- Genetic epidemiology of autoinflammatory disease variants in Indian population from 1029 whole genomes (2021) (0)
- FragSTR: open-source STR marker analysis (2017) (0)
- The Complete Chloroplast Genome of Dendrobium nobile, an endangered medicinal orchid from Northeast India and its comparison with related chloroplast genomes of Dendrobium species (2018) (0)
- Genome-wide analysis identifies common CNVs associated with primary open angle glaucoma (2014) (0)
- Host cholesterol dependent activation of VapC12 toxin enriches persister population during Mycobacterium tuberculosis infection (2019) (0)
- Whole exome-sequencing of vitiligo lesions indicate lower burden of somatic variations: implications in risk for non-melanoma skin cancers (2022) (0)
- Role of polyketide quinone in the maintenance of mycobacterial bioenergetics in oxygen-deficient niches (2016) (0)
- Accurate Classification of Biological Data Using Ensembles (2015) (0)
- Clinico-Etiological Profile of New Onset Seizures in Adults in Southern Odisha - An Observational Study (2021) (0)
- Association studies in rice introgression lines contributing to high yielding ability (2017) (0)
- VitiVar: A locus specific database of vitiligo associated genes and variations. (2019) (0)
- Selection of relevant features from amino acids enables development of robust classifiers (2014) (0)
- Evaluation of antimicrobial efficacy of mycoendophytic isolates from rice (Oryza sativa L.) crop (2023) (0)
- Illustrates the comprehensive analyses of central proteins as potential drug targets. (2012) (0)
- Fusion transcripts in normal human cortex increase with age and show distinct genomic features for single cells and tissues (2020) (0)
- Understanding Genomic Variations in the Context of Health and Disease: Annotation, Interpretation, and Challenges (2018) (0)
- Spectrum of large copy number variations in 26 diverse Indian populations: potential involvement in phenotypic diversity (2011) (0)
- Cellular responses to proteostasis perturbations reveal non-optimal feedback in chaperone networks (2019) (0)
- INTRINSICALLY DISORDERED PROTEINS: REVISITING THE STRUCTURE-FUNCTION PARADIGM (2013) (0)
- Morphological and Biochemical Responses of Helianthus annuus L. to Chromium Contaminated Soil from Sukinda Mining Area (Odisha, India) (2017) (0)
- Feasibility of establishing a multi-center research database using the electronic health record: The PURSUIT network. (2022) (0)
- Genome-wide analysis identifies common CNVs associated with primary open angle glaucoma (2014) (0)
- CorrectionRecent Admixture in an Indian Population of African Ancestry (2011) (0)
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