Dirk Haller
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Computer Science
Dirk Haller's Degrees
- PhD Computer Science Stanford University
- Masters Computer Science University of California, Berkeley
- Bachelors Computer Science University of California, Berkeley
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(Suggest an Edit or Addition)Dirk Haller's Published Works
Number of citations in a given year to any of this author's works
Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- Critical review: vegetables and fruit in the prevention of chronic diseases (2012) (1481)
- High-fat diet alters gut microbiota physiology in mice (2013) (514)
- Safety assessment of probiotics for human use (2010) (514)
- A guide to histomorphological evaluation of intestinal inflammation in mouse models. (2014) (511)
- Metabolic activation of intrahepatic CD8+ T cells and NKT cells causes nonalcoholic steatohepatitis and liver cancer via cross-talk with hepatocytes. (2014) (475)
- Non-pathogenic bacteria elicit a differential cytokine response by intestinal epithelial cell/leucocyte co-cultures (2000) (450)
- Dysbiotic gut microbiota causes transmissible Crohn's disease-like ileitis independent of failure in antimicrobial defence (2015) (297)
- A consideration of biomarkers to be used for evaluation of inflammation in human nutritional studies. (2013) (278)
- Interleukin 10 blocked endoplasmic reticulum stress in intestinal epithelial cells: impact on chronic inflammation (2007) (273)
- Guidance for substantiating the evidence for beneficial effects of probiotics: current status and recommendations for future research. (2010) (267)
- IMNGS: A comprehensive open resource of processed 16S rRNA microbial profiles for ecology and diversity studies (2016) (263)
- Depletion of luminal iron alters the gut microbiota and prevents Crohn's disease-like ileitis (2010) (263)
- PASylation: a biological alternative to PEGylation for extending the plasma half-life of pharmaceutically active proteins (2013) (252)
- Quercetin inhibits TNF-induced NF-kappaB transcription factor recruitment to proinflammatory gene promoters in murine intestinal epithelial cells. (2007) (243)
- Enterococcus faecalis metalloprotease compromises epithelial barrier and contributes to intestinal inflammation. (2011) (228)
- The Mouse Intestinal Bacterial Collection (miBC) provides host-specific insight into cultured diversity and functional potential of the gut microbiota (2016) (223)
- Oral versus intravenous iron replacement therapy distinctly alters the gut microbiota and metabolome in patients with IBD (2016) (218)
- Activation of Human Peripheral Blood Mononuclear Cells by Nonpathogenic Bacteria In Vitro: Evidence of NK Cells as Primary Targets (2000) (199)
- Probiotics and immune response (2002) (193)
- Lactocepin secreted by Lactobacillus exerts anti-inflammatory effects by selectively degrading proinflammatory chemokines. (2012) (187)
- IKKβ and Phosphatidylinositol 3-Kinase/Akt Participate in Non-pathogenic Gram-negative Enteric Bacteria-induced RelA Phosphorylation and NF-κB Activation in Both Primary and Intestinal Epithelial Cell Lines* (2002) (166)
- Gene-environment interactions in chronic inflammatory disease (2011) (155)
- Functional diversity of flavonoids in the inhibition of the proinflammatory NF-kappaB, IRF, and Akt signaling pathways in murine intestinal epithelial cells. (2006) (152)
- The gut microbiota promotes hepatic fatty acid desaturation and elongation in mice (2018) (148)
- Auto-aggressive CXCR6+ CD8 T cells cause liver immune pathology in NASH (2021) (140)
- Metabolic and functional properties of lactic acid bacteria in the gastro-intestinal ecosystem: a comparative in vitro study between bacteria of intestinal and fermented food origin. (2001) (139)
- Dietary fat and gut microbiota interactions determine diet-induced obesity in mice (2016) (138)
- The gut microbiota drives the impact of bile acids and fat source in diet on mouse metabolism (2018) (132)
- IL-10 Gene-Deficient Mice Lack TGF-β/Smad Signaling and Fail to Inhibit Proinflammatory Gene Expression in Intestinal Epithelial Cells after the Colonization with Colitogenic Enterococcus faecalis1 (2005) (128)
- Innate mechanisms for Bifidobacterium lactis to activate transient pro‐inflammatory host responses in intestinal epithelial cells after the colonization of germ‐free rats (2005) (128)
- Induction of dsRNA-activated protein kinase links mitochondrial unfolded protein response to the pathogenesis of intestinal inflammation (2011) (126)
- Analysis of factors contributing to variation in the C57BL/6J fecal microbiota across German animal facilities. (2016) (125)
- Kupffer Cell-Derived Tnf Triggers Cholangiocellular Tumorigenesis through JNK due to Chronic Mitochondrial Dysfunction and ROS. (2017) (123)
- Mitochondrial function — gatekeeper of intestinal epithelial cell homeostasis (2018) (122)
- Intestinal microbiota in metabolic diseases (2014) (122)
- Mitochondrial function controls intestinal epithelial stemness and proliferation (2016) (120)
- Transforming Growth Factor-β1 Inhibits Non-pathogenic Gramnegative Bacteria-induced NF-κB Recruitment to the Interleukin-6 Gene Promoter in Intestinal Epithelial Cells through Modulation of Histone Acetylation* (2003) (120)
- Correction: Corrigendum: The Mouse Intestinal Bacterial Collection (miBC) provides host-specific insight into cultured diversity and functional potential of the gut microbiota (2016) (119)
- Effect of caloric restriction on gut permeability, inflammation markers, and fecal microbiota in obese women (2017) (116)
- Dysbiosis in intestinal inflammation: Cause or consequence. (2016) (115)
- Bacterial proteases in IBD and IBS (2011) (113)
- Conversion of Daidzein and Genistein by an Anaerobic Bacterium Newly Isolated from the Mouse Intestine (2008) (111)
- The ATG16L1 Gene Variants rs2241879 and rs2241880 (T300A) Are Strongly Associated With Susceptibility to Crohn's Disease in the German Population (2008) (111)
- Guidance for substantiating the evidence for beneficial effects of probiotics: probiotics in chronic inflammatory bowel disease and the functional disorder irritable bowel syndrome. (2010) (109)
- Arrhythmic Gut Microbiome Signatures Predict Risk of Type 2 Diabetes. (2020) (109)
- Bacteria‐ and host‐derived mechanisms to control intestinal epithelial cell homeostasis: Implications for chronic inflammation (2007) (108)
- Differential protein expression profile in the intestinal epithelium from patients with inflammatory bowel disease. (2007) (108)
- Randomized controlled trial on the impact of early-life intervention with bifidobacteria on the healthy infant fecal microbiota and metabolome. (2017) (106)
- Molecular crosstalk of probiotic bacteria with the intestinal immune system: clinical relevance in the context of inflammatory bowel disease. (2010) (100)
- High Fat Diet Accelerates Pathogenesis of Murine Crohn’s Disease-Like Ileitis Independently of Obesity (2013) (100)
- Intestinal organoids for assessing nutrient transport, sensing and incretin secretion (2015) (99)
- Modulation of Cytokine Release by Differentiated CACO‐2 Cells in a Compartmentalized Coculture Model with Mononuclear Leucocytes and Nonpathogenic Bacteria (2004) (99)
- Gut metabolites and bacterial community networks during a pilot intervention study with flaxseeds in healthy adult men. (2015) (97)
- Interleukin 31 mediates MAP kinase and STAT1/3 activation in intestinal epithelial cells and its expression is upregulated in inflammatory bowel disease (2007) (96)
- Activation of Human NK Cells by Staphylococci and Lactobacilli Requires Cell Contact-Dependent Costimulation by Autologous Monocytes (2002) (95)
- Structure-function analysis of the tertiary bile acid TUDCA for the resolution of endoplasmic reticulum stress in intestinal epithelial cells. (2011) (86)
- Isolation of bacteria from the ileal mucosa of TNFdeltaARE mice and description of Enterorhabdus mucosicola gen. nov., sp. nov. (2009) (83)
- Interaction Between Resident Luminal Bacteria and the Host: Can a Healthy Relationship Turn Sour? (2004) (83)
- Post-Translational Inhibition of IP-10 Secretion in IEC by Probiotic Bacteria: Impact on Chronic Inflammation (2009) (82)
- Gut matters: microbe-host interactions in allergic diseases. (2012) (80)
- Balancing inflammatory, lipid, and xenobiotic signaling pathways by VSL#3, a biotherapeutic agent, in the treatment of inflammatory bowel disease (2009) (78)
- Metabolic phenotyping of the Crohn's disease-like IBD etiopathology in the TNF(ΔARE/WT) mouse model. (2011) (77)
- Mechanisms of Microbe–Host Interaction in Crohn’s Disease: Dysbiosis vs. Pathobiont Selection (2015) (75)
- Metabolic assessment of gradual development of moderate experimental colitis in IL-10 deficient mice. (2009) (75)
- IKK beta and phosphatidylinositol 3-kinase/Akt participate in non-pathogenic Gram-negative enteric bacteria-induced RelA phosphorylation and NF-kappa B activation in both primary and intestinal epithelial cell lines. (2002) (73)
- Intestinimonas butyriciproducens gen. nov., sp. nov., a butyrate-producing bacterium from the mouse intestine. (2013) (73)
- High-Fat Diet Accelerates Carcinogenesis in a Mouse Model of Barrett's Esophagus via Interleukin 8 and Alterations to the Gut Microbiome. (2019) (73)
- Inflammation and cellular stress: a mechanistic link between immune-mediated and metabolically driven pathologies (2011) (71)
- Sulfonolipids as novel metabolite markers of Alistipes and Odoribacter affected by high-fat diets (2017) (71)
- Network analysis methods for studying microbial communities: A mini review (2021) (69)
- Mitochondrial impairment drives intestinal stem cell transition into dysfunctional Paneth cells predicting Crohn’s disease recurrence (2020) (68)
- Activated ATF6 Induces Intestinal Dysbiosis and Innate Immune Response to Promote Colorectal Tumorigenesis. (2018) (66)
- ER Stress and the UPR in Shaping Intestinal Tissue Homeostasis and Immunity (2019) (62)
- Dual Role of the Adaptive Immune System in Liver Injury and Hepatocellular Carcinoma Development. (2016) (62)
- Genome-wide association study in 8,956 German individuals identifies influence of ABO histo-blood groups on gut microbiome (2020) (61)
- Acetatifactor muris gen. nov., sp. nov., a novel bacterium isolated from the intestine of an obese mouse (2012) (57)
- Molecular interactions between bacteria, the epithelium, and the mucosal immune system in the intestinal tract: implications for chronic inflammation. (2007) (55)
- Intestinal epithelial cell signalling and chronic inflammation: From the proteome to specific molecular mechanisms. (2007) (55)
- Integrated microbiota and metabolite profiles link Crohn’s disease to sulfur metabolism (2020) (55)
- Differential effect of immune cells on non‐pathogenic Gram‐negative bacteria‐induced nuclear factor‐κB activation and pro‐inflammatory gene expression in intestinal epithelial cells (2004) (55)
- Reduced microbial diversity and high numbers of one single Escherichia coli strain in the intestine of colitic mice. (2009) (54)
- Bacterial Signaling at the Intestinal Epithelial Interface in Inflammation and Cancer (2018) (54)
- Lactobacillus reuteri 100-23 transiently activates intestinal epithelial cells of mice that have a complex microbiota during early stages of colonization. (2008) (53)
- IL‐10 Gene‐Deficient Mice Lack TGF‐Beta/Smad‐Mediated TLR2 Degradation and Fail to Inhibit Proinflammatory Gene Expression in Intestinal Epithelial Cells under Conditions of Chronic Inflammation (2006) (52)
- Gut barrier impairment by high-fat diet in mice depends on housing conditions. (2016) (50)
- Quantification of Fecal Short Chain Fatty Acids by Liquid Chromatography Tandem Mass Spectrometry—Investigation of Pre-Analytic Stability (2019) (48)
- IL‐10 Producing CD14low Monocytes Inhibit Lymphocyte‐Dependent Activation of Intestinal Epithelial Cells by Commensal Bacteria (2002) (46)
- Exclusive enteral nutrition in active pediatric Crohn disease: Effects on intestinal microbiota and immune regulation. (2016) (46)
- Intestinal epithelial cell signalling and host‐derived negative regulators under chronic inflammation: to be or not to be activated determines the balance towards commensal bacteria (2006) (46)
- Mitochondria at the Interface Between Danger Signaling and Metabolism: Role of Unfolded Protein Responses in Chronic Inflammation (2012) (45)
- Septins Arrange F-Actin-Containing Fibers on the Chlamydia trachomatis Inclusion and Are Required for Normal Release of the Inclusion by Extrusion (2014) (45)
- Surface-Associated Lipoproteins Link Enterococcus faecalis Virulence to Colitogenic Activity in IL-10-Deficient Mice Independent of Their Expression Levels (2015) (45)
- The Potential Role of the Dipeptidyl Peptidase-4-Like Activity From the Gut Microbiota on the Host Health (2018) (43)
- Expression and regulation of the chemokine CXCL16 in Crohn's disease and models of intestinal inflammation (2010) (43)
- An Open-Labeled Study on Fecal Microbiota Transfer in Irritable Bowel Syndrome Patients Reveals Improvement in Abdominal Pain Associated with the Relative Abundance of Akkermansia Muciniphila (2018) (43)
- Enterorhabdus caecimuris sp. nov., a member of the family Coriobacteriaceae isolated from a mouse model of spontaneous colitis, and emended description of the genus Enterorhabdus Clavel et al. 2009 (2010) (43)
- Handling of spurious sequences affects the outcome of high-throughput 16S rRNA gene amplicon profiling (2020) (43)
- The peptide transporter PEPT1 is expressed in distal colon in rodents and humans and contributes to water absorption. (2013) (42)
- Semisynthetic Diet Ameliorates Crohn’s Disease–Like Ileitis in TNF&Dgr;ARE/WT Mice Through Antigen-Independent Mechanisms of Gluten (2013) (42)
- Activating Transcription Factor 6 Mediates Inflammatory Signals in Intestinal Epithelial Cells Upon Endoplasmic Reticulum Stress. (2020) (40)
- The role of the selenoprotein S (SELS) gene -105G>A promoter polymorphism in inflammatory bowel disease and regulation of SELS gene expression in intestinal inflammation. (2007) (39)
- Gene-environment interaction in chronic disease: a European Science Foundation Forward Look. (2011) (37)
- Protective effect of milk protein based microencapsulation on bacterial survival in simulated gastric juice versus the murine gastrointestinal system (2015) (37)
- 15-Deoxy-Δ12,14-prostaglandin J2-mediated ERK Signaling Inhibits Gram-negative Bacteria-induced RelA Phosphorylation and Interleukin-6 Gene Expression in Intestinal Epithelial Cells through Modulation of Protein Phosphatase 2A Activity* (2004) (37)
- Orally administered allyl sulfides from garlic ameliorate murine colitis. (2015) (36)
- Microbiome risk profiles as biomarkers for inflammatory and metabolic disorders (2022) (36)
- Cytokine Secretion by Stimulated Monocytes Depends on the Growth Phase and Heat Treatment of Bacteria (1999) (36)
- In Vitro Interactions of Dietary Fibre Enriched Food Ingredients with Primary and Secondary Bile Acids (2019) (35)
- Infusion of donor feces affects the gut–brain axis in humans with metabolic syndrome (2020) (35)
- Diet-induced obesity causes metabolic impairment independent of alterations in gut barrier integrity. (2015) (35)
- Intestinal microflora and the interaction with immunocompetent cells (1999) (34)
- Protease signaling through protease activated receptor 1 mediate nerve activation by mucosal supernatants from irritable bowel syndrome but not from ulcerative colitis patients (2018) (34)
- Interactions between commensal bacteria and mucosal immunocompetent cells (1999) (34)
- Organoids to Study Intestinal Nutrient Transport, Drug Uptake and Metabolism – Update to the Human Model and Expansion of Applications (2020) (34)
- Endoplasmic Reticulum Stress Response Promotes Cytotoxic Phenotype of CD8αβ+ Intraepithelial Lymphocytes in a Mouse Model for Crohn’s Disease-like Ileitis (2012) (33)
- Nutrigenomics and Nutrigenetics in Inflammatory Bowel Diseases (2012) (32)
- Intestinal epithelial cell proteome in IL-10 deficient mice and IL-10 receptor reconstituted epithelial cells: impact on chronic inflammation. (2007) (31)
- Intestinal Microbiota in Animal Models of Inflammatory Diseases. (2015) (31)
- Differentiation of Adsorptive and Viscous Effects of Dietary Fibres on Bile Acid Release by Means of In Vitro Digestion and Dialysis (2018) (31)
- Reciprocal interaction of diet and microbiome in inflammatory bowel diseases (2015) (31)
- Complex Bacterial Consortia Reprogram the Colitogenic Activity of Enterococcus faecalis in a Gnotobiotic Mouse Model of Chronic, Immune-Mediated Colitis (2019) (31)
- Intestinal steroid profiles and microbiota composition in colitic mice (2011) (31)
- Nutrigenomics and IBD: the intestinal microbiota at the cross-road between inflammation and metabolism. (2010) (29)
- Gut bacterial dysbiosis and instability is associated with the onset of complications and mortality in COVID-19 (2021) (28)
- Helicobacter pylori γ‐glutamyltranspeptidase impairs T‐lymphocyte function by compromising metabolic adaption through inhibition of cMyc and IRF4 expression (2015) (27)
- Associations between habitual diet, metabolic disease, and the gut microbiota using latent Dirichlet allocation (2021) (27)
- Lactocepin as a protective microbial structure in the context of IBD (2013) (26)
- Comparing Circadian Rhythmicity in the Human Gut Microbiome (2020) (25)
- C/EBP homologous protein inhibits tissue repair in response to gut injury and is inversely regulated with chronic inflammation (2014) (25)
- Loss of Toll-like receptor 2 and 4 leads to differential induction of endoplasmic reticulum stress and proapoptotic responses in the intestinal epithelium under conditions of chronic inflammation. (2009) (24)
- Properties of myenteric neurones and mucosal functions in the distal colon of diet‐induced obese mice (2013) (24)
- Role of the adipocyte-specific NF-κB activity in the regulation of IP-10 and T cell migration. (2011) (24)
- Colonic Expression of the Peptide Transporter PEPT1 Is Downregulated During Intestinal Inflammation and Is Not Required for NOD2-dependent Immune Activation (2014) (24)
- Mechanisms of Interactions between Bile Acids and Plant Compounds—A Review (2020) (23)
- Intestinal epithelial cell proteome from wild-type and TNFDeltaARE/WT mice: effect of iron on the development of chronic ileitis. (2009) (22)
- Effects of increase in fish oil intake on intestinal eicosanoids and inflammation in a mouse model of colitis (2013) (22)
- Parvibacter caecicola gen. nov., sp. nov., a bacterium of the family Coriobacteriaceae isolated from the caecum of a mouse. (2013) (21)
- Percutaneous, transendocardial injection of bone marrow-derived mononuclear cells in heart failure patients following acute ST-elevation myocardial infarction: ALSTER-Stem Cell trial. (2012) (21)
- Impact of a probiotic Enterococcus faecalis in a gnotobiotic mouse model of experimental colitis. (2011) (20)
- Mitochondrial Metabolism in the Intestinal Stem Cell Niche—Sensing and Signaling in Health and Disease (2021) (20)
- Microbiome and metabolic disorders related to obesity: Which lessons to learn from experimental models? (2016) (20)
- Isolation of bacteria from mouse caecal samples and description of Bacteroides sartorii sp. nov (2010) (20)
- Functional relevance of microbiome signatures: The correlation era requires tools for consolidation (2017) (19)
- Increased Pancreatic Protease Activity in Response to Antibiotics Impairs Gut Barrier and Triggers Colitis (2018) (19)
- Environmental signals rather than layered ontogeny imprint the function of type 2 conventional dendritic cells in young and adult mice (2021) (19)
- Transcriptome analysis of Enterococcus faecalis toward its adaption to surviving in the mouse intestinal tract (2014) (19)
- Multi-omics in IBD biomarker discovery: the missing links (2019) (17)
- Streptococcus danieliae sp. nov., a novel bacterium isolated from the caecum of a mouse (2012) (17)
- Catechols in caffeic acid phenethyl ester are essential for inhibition of TNF-mediated IP-10 expression through NF-κB-dependent but HO-1- and p38-independent mechanisms in mouse intestinal epithelial cells. (2011) (17)
- Enterococcus faecalis strains differentially regulate Alix/AIP1 protein expression and ERK 1/2 activation in intestinal epithelial cells in the context of chronic experimental colitis. (2009) (16)
- Murimonas intestini gen. nov., sp. nov., an acetate-producing bacterium of the family Lachnospiraceae isolated from the mouse gut. (2015) (16)
- Retention of Primary Bile Acids by Lupin Cell Wall Polysaccharides Under In Vitro Digestion Conditions (2019) (16)
- Dysbiosis in Crohn's disease - Joint action of stochastic injuries and focal inflammation in the gut (2017) (15)
- Unfolded protein responses in the intestinal epithelium: sensors for the microbial and metabolic environment. (2012) (14)
- Expression of heparan sulfate proteoglycans in murine models of experimental colitis* (2012) (14)
- The intestinal clock drives the microbiome to maintain gastrointestinal homeostasis (2022) (14)
- Microbe–Mucus Interface in the Pathogenesis of Colorectal Cancer (2021) (14)
- Development of a Highly Sensitive Ultra-High-Performance Liquid Chromatography Coupled to Electrospray Ionization Tandem Mass Spectrometry Quantitation Method for Fecal Bile Acids and Application on Crohn's Disease Studies. (2021) (13)
- Microbial Signatures as a Predictive Tool in IBD-Pearls and Pitfalls. (2018) (13)
- Posttranslational Inhibition of Proinflammatory Chemokine Secretion in Intestinal Epithelial Cells: Implications for Specific IBD Indications (2010) (13)
- Milk-Derived Amadori Products in Feces of Formula-Fed Infants. (2019) (12)
- Clinical data on three cases of occupationally induced PCB-intoxication. (1996) (12)
- The Gut Microbiome in Health and Disease (2018) (12)
- A Phenotyping Platform to Characterize Healthy Individuals Across Four Stages of Life - The Enable Study (2020) (11)
- Maternal High-fat Diet Accelerates Development of Crohn's Disease-like Ileitis in TNF&Dgr;ARE/WT Offspring (2015) (11)
- Metabolic phenotyping of an adoptive transfer mouse model of experimental colitis and impact of dietary fish oil intake. (2015) (11)
- Short-Term Overfeeding with Dairy Cream Does Not Modify Gut Permeability, the Fecal Microbiota, or Glucose Metabolism in Young Healthy Men. (2018) (10)
- Comprehensive Lifestyle-Modification in Patients with Ulcerative Colitis–A Randomized Controlled Trial (2020) (10)
- Tgf-B1-activated SMAD signaling inhibits non-pathogenic gram negative bacteria-induced Nf-Kb recruitment to the Il-6 gene promoter through modulation of histone acetylation in intestinal epithelial cells (2003) (9)
- Republished: Bacterial proteases in IBD and IBS (2012) (9)
- World Congress Integrative Medicine & Health 2017: part two (2017) (9)
- Fetal Exposure to Maternal Inflammation Does Not Affect Postnatal Development of Genetically-Driven Ileitis and Colitis (2014) (8)
- Longitudinal Profiles of Dietary and Microbial Metabolites in Formula- and Breastfed Infants (2020) (8)
- Obst und Gemüse in der Prävention chronischer Krankheiten (2007) (8)
- Recent advances in culture-based gut microbiome research. (2021) (8)
- Host traits, lifestyle and environment are associated with human skin bacteria (2021) (8)
- A mitochondrial unfolded protein response inhibitor suppresses prostate cancer growth in mice via HSP60 (2022) (7)
- Biofunktionalität der Lebensmittelinhaltsstoffe (2013) (7)
- Gemüse und Obst in der Prävention ausgewählter chronischer Krankheiten: Stellungnahme (2012) (7)
- MiMiC: a bioinformatic approach for generation of synthetic communities from metagenomes (2021) (6)
- Partial enteral nutrition has no benefit on bone health but improves growth in paediatric patients with quiescent or mild Crohn's disease. (2020) (6)
- What is known about the effect of probiotics in meat products (1998) (6)
- Strain-Level Diversity in the Gut: The P. copri Case. (2019) (6)
- The gut microbiota drives the impact of bile acids and fat source in diet on mouse metabolism (2018) (6)
- Comparison of iron-reduced and iron-supplemented semisynthetic diets in T cell transfer colitis (2019) (6)
- Intestinal epithelial cell metabolism at the interface of microbial dysbiosis and tissue injury (2022) (5)
- Physiological relevance of food grade microcapsules: Impact of milk protein based microcapsules on inflammation in mouse models for inflammatory bowel diseases. (2015) (5)
- ABO histo-blood groups influence gut microbiome, with causal relationship between Bacteroides and inflammatory bowel disease (2020) (4)
- UEG Week 2016 Poster Presentations (2016) (4)
- Identification of fitness determinants in Enterococcus faecalis by differential proteomics (2013) (4)
- A randomization-based causal inference framework for uncovering environmental exposure effects on human gut microbiota (2021) (4)
- Fetal gut laser microdissection in combination with RNA preamplification enables epithelial-specific transcriptional profiling. (2015) (4)
- Multi-omic modelling of inflammatory bowel disease with regularized canonical correlation analysis. (2020) (4)
- Arrhythmic gut microbiome signatures for risk profiling of Type-2 Diabetes (2019) (4)
- High Enrichment of MMP-9 and Carboxypeptidase A by Tweezing Adsorptive Bubble Separation (TABS) (2010) (4)
- Die Interaktion zwischen Darmbakterien und Mensch als zentraler Faktor für die Darmgesundheit (2015) (4)
- High-fat Diet Accelerates Carcinogenesis in a Mouse Model of Barrett’s Esophagus via IL8 and Alterations to the Gut Microbiome (2019) (4)
- T2025 Probiotic-Derived Lactocepin Degrades the Pro-Inflammatory Chemokine IP-10: Impact on Chronic Intestinal Inflammation (2010) (3)
- Dysregulated lipid metabolism in colorectal cancer (2021) (3)
- Offering Fiber-Enriched Foods Increases Fiber Intake in Adults With or Without Cardiometabolic Risk: A Randomized Controlled Trial (2022) (3)
- Su1879 Spatial 3D-Stereomicroscopic, Microbial and Metabolic Characterization of Intestinal Villous Erosions and Ulcerations in Mice (2016) (3)
- Intestinal Epithelial Cell Signaling and Host-derived Negative Regulators Under Chronic Inflammation (2006) (3)
- Identification of an up-regulated anti-apoptotic network in the internal thoracic artery. (2011) (3)
- Resetting of the Mucosal T Cell Repertoire after Hematopoietic Stem Cell Transplantation in Refractory Crohn’s Disease (2017) (3)
- Namco: a microbiome explorer (2021) (3)
- Intestinal Microbiome in Health and Disease: Introduction (2018) (3)
- TGF-b1 inhibits non-pathogenic Gram negative bacteria-induced NF-kB recruitment to the IL-6 gene promoter in intestinal epithelial cells through modulation of histone acetylation (2003) (3)
- Modeling microbe-host interaction in the pathogenesis of Crohn's disease. (2021) (2)
- MINIMAL INVASIVER DRUCKSENSOR ZUR TELEMETRISCHEN MESSUNG DES BLASENINNENDRUCKS BEIM MENSCHEN (2002) (2)
- Microbe-host interaction in chronic diseases. (2010) (2)
- OP004 Resetting of the mucosal T cell repertoire after hematopoietic stem cell transplantation in refractory Crohn's disease. (2017) (2)
- Activating Transcription Factor 6 Mediates In fl ammatory Signals in Intestinal Epithelial Cells Upon Endoplasmic Reticulum Stress (2020) (2)
- Genetic and environmental circadian disruption induce weight gain through changes in the gut microbiome (2022) (2)
- Molecular interactions of commensal enteric bacteria with the intestinal epithelium and the mucosal immune system: implications for chronic intestinal inflammation. (2008) (2)
- Tu1858 – Segmented Filamentous Bacteria Induce Alternative Th17 Differentiation and Ileo-Colonic Crohn's Disease-Like Inflammation (2019) (2)
- [Interaction between humans and intestinal bacteria as a determinant for intestinal health : intestinal microbiome and inflammatory bowel diseases]. (2015) (2)
- P030 High fat diet aggravates Crohn's disease-like ileitis independently of obesity via alterations of epithelial barrier homeostasis (2013) (2)
- Fecal Bile Acids and Neutral Sterols Are Associated with Latent Microbial Subgroups in the Human Gut (2022) (2)
- Microbiota in Chronic Mucosal Inflammation (2011) (2)
- Sa1430a Antibiotic Mediated Rise in Large Intestinal Proteolytic Activity Is Paralleled by Reduced Large Intestinal Barrier Function and May Be a Risk Factor for IBD Development in Susceptible Organisms (2016) (1)
- Correction: Post-Translational Inhibition of IP-10 Secretion in IEC by Probiotic Bacteria: Impact on Chronic Inflammation (2009) (1)
- Intelectin-1 binds and alters the localization of the mucus barrier–modifying bacterium Akkermansia muciniphila (2022) (1)
- Evaluation of the genotoxic potential of acrylamide: Arguments for the derivation of a tolerable daily intake (TDI value). (2023) (1)
- Investigation of Adiposity Measures and Operational Taxonomic unit (OTU) Data Transformation Procedures in Stool Samples from a German Cohort Study Using Machine Learning Algorithms (2020) (1)
- Sa1739 Comparative Proteome Profiling of Intestinal Epithelial Cells in Mice and IBD Patients (2014) (1)
- Transmissive Crohn's disease-like ileitis is caused by functional dysbiosis in the intestinal microbiota independent of inflammation-driven Paneth cell failure (2015) (1)
- Effects of increase in fish oil intake on intestinal eicosanoids and inflammation in a mouse model of colitis (2013) (1)
- Author's response (2011) (1)
- Intestinal Microbiology and Ecology in Crohn’s Disease and Ulcerative Colitis (2017) (1)
- Dysbiosis of the intestinal microbiota and colorectal cancer (2020) (1)
- Intestinal microbiota: From sequencing to function. (2016) (1)
- Microbial Signals Link Westernized Diet to Metabolic Inflammation: More Evidence to Resolve Controversies (2019) (1)
- Modeling microbiota-associated human diseases: from minimal models to complex systems (2022) (1)
- Identification of Disease-Relevant Bacterial Signatures in Gnotobiotic IL-10 Deficient Mice using Fecal Samples from IBD Patients Undergoing Hematopoietic Stem Cell Transplantation (2017) (1)
- Increased expression of the chemokine CXCL16 in intestinal inflammation and association of the CXCL16p.Ala181Val polymorphism with early disease onset and ileal involvement in patients with Crohn's disease (2007) (1)
- Tu2035 High-Fat Feeding Increases Recruitment of ZO-1+Ocldn+CD11c+ Dendritic Cells to the Lamina Propria and Accelerates Disease Onset in a Murine Model of Crohn's Disease-Like Ileitis (2012) (1)
- 263 – Gut Microbiota Profiling in a Prospective Population Cohort in Relation to Metabolic Health (2019) (1)
- Helicobacter pylori promotes colorectal carcinogenesis by deregulating intestinal immunity and inducing a mucus-degrading microbiota signature (2022) (1)
- Genetic and environmental circadian disruption induce metabolic impairment through changes in the gut microbiome (2022) (1)
- Probiotika: Anforderungen und Wirkmechanismen (2012) (1)
- Salivary nitrate/nitrite and acetaldehyde in humans: potential combination effects in the upper gastrointestinal tract and possible consequences for the in vivo formation of N-nitroso compounds—a hypothesis (2022) (1)
- Role of the Gut Microbiota in Maintaining GI Health: Highlights on Inflammatory Bowel Disease (2015) (1)
- Depletion of Dietary Iron Alters the Gut Microbiome and Prevents Crohn's Disease-Like Ileitis (2011) (1)
- Tu1760 Functional Evidence for a Causative Role of the Intestinal Microbiota in Crohn's Disease-Like Ileitis Using Antibiotic-Treated and Germ-Free TNFDeltaare/+ Mice (2014) (0)
- Sulfonolipids as novel metabolite markers of Alistipes and Odoribacter affected by high-fat diets (2017) (0)
- Acetatifactor muris gen. nov., sp. nov., a novel bacterium isolated from the intestine of an obese mouse (2012) (0)
- More than a Fortress - The Intestinal Mucosa is an Integral Part of the Gut Acting as Barrier and Defence (2008) (0)
- The intestinal circadian clock drives microbial rhythmicity to maintain gastrointestinal homeostasis (2021) (0)
- 117: MICROBIAL METABOLITES OF FAT, NOT FIBER, MAY EXPLAIN THE INCREASING INCIDENCE OF COLON CANCER WITH URBANIZATION OF SOUTH AFRICANS (2022) (0)
- 757 Endoplasmic Reticulum Stress Responses Contribute to the Cytotoxic Phenotype of CD8αβ Intraepithelial Lymphocytes Through the Regulation Granzyme B Activity in Crohn's Disease-Like TNFΔ are Mice (2010) (0)
- Transcriptome analysis of Enterococcus faecalis toward its adaption to surviving in the mouse intestinal tract (2014) (0)
- Is Autologous Fecal Microbiota Transfer after Exclusive Enteral Nutrition in Pediatric Crohn’s Disease Patients Rational and Feasible? Data from a Feasibility Test (2023) (0)
- 403 Tissue-Specific Induction of Activating Transcription Factor 6 Signaling Promotes Intestinal Dysbiosis and Colonic Tumorigenesis (2015) (0)
- Streptococcus danieliae sp. nov., a novel bacterium isolated from the caecum of a mouse (2012) (0)
- Clinical News (2010) (0)
- Comprehensive Lifestyle-Modification in Patients with Ulcerative Colitis–A Randomized Controlled Trial (2020) (0)
- P057 Mucosal microbiota adapts to ATF6-induced alterations in host lipid metabolism with prognostic value in colorectal cancer (2022) (0)
- Associations between habitual diet, metabolic disease, and the gut microbiota using latent Dirichlet allocation (2021) (0)
- Diet prevents the expansion of segmented filamentous bacteria and ileo-colonic inflammation in a model of Crohn’s disease (2022) (0)
- Intestinal microbiota and health. An overview of the health importance of intestinal bacteria. (2015) (0)
- Host Microbiota Interactions 1 (2015) (0)
- Targeting the intestinal circadian clock by meal timing ameliorates gastrointestinal inflammation (2023) (0)
- 608: DIET CONTROLS SEGMENTED FILAMENTOUS BACTERIA IN DRIVING CROHN'S DISEASE-LIKE INFLAMMATION IN TNFΔARE MICE (2022) (0)
- M1826 Chemical Chaperones Modulate Endoplasmic Reticulum Stress Pathways in Intestinal Epithelial Cells (2010) (0)
- 120 – Mitochondrial Impairment in Crohn's Disease-Like Inflammation Drives Intestinal Stem Cell Transition Towards Dysfunctional Paneth Cells (2019) (0)
- Microbiome and Diseases: Inflammatory Bowel Diseases (2018) (0)
- S27 Microarray analysis of intestinal epithelial cells identifies novel interleukin 10-specific target genes in T cell-mediated colitis (2010) (0)
- The Intestinal Clock Regulates Host Metabolism through the Fiber-Dependent Microbiome and Macronutrient Transcriptome (2023) (0)
- Editors’ Prelude to Microbiome Research Reports (2021) (0)
- 435 Microbiota-Dependent Signals Link ATF6-driven Unfolded Protein Response to Colonic Tumorigenesis (2016) (0)
- NF-kappa B dependent regulation of IP-10 in 3T3-L1 and human primary preadipocytes and adipocytes (2008) (0)
- 544: MUCUS-DEGRADING MICROBIOTA AND PROINFLAMMATORY T-CELL RESPONSES UNDERLIE HELICOBACTER PYLORI INDUCED COLON CARCINOGENESIS (2022) (0)
- Salivary nitrate/nitrite and acetaldehyde in humans: potential combination effects in the upper gastrointestinal tract and possible consequences for the in vivo formation of N-nitroso compounds—a hypothesis (2022) (0)
- PKR in DSS-induced Colitis: A Matter of Genetic Background and Maternal (2013) (0)
- 119 Bacterial Proteases Contribute to the Development of Chronic Intestinal Inflammation By Impairing Epithelial Barrier Function (2009) (0)
- There is more than pharmacology: Comprehensive lifestyle-modification in patients with ulcerative colitis – A randomized controlled trial (2019) (0)
- W1601 Signal Integration of Endoplasmic Reticulum and Mitochondrial Unfolded Protein Stress Responses in Intestinal Epithelial Cells of Patients with Ulcerative Colitis and Murine Models of Immune-Mediated Colitis: Inhibitory Mechanisms of Interleukin 10 (2009) (0)
- 1015 Post-Translational Inhibition of IP-10 Protein Secretion in Intestinal Epithelial Cells Through ERK-Dependent and Ubiquitin-Mediated Mechanisms: Bacterial Strain-Specific Effects of VSL#3 (2008) (0)
- Elucidating the transmission landscape of the human microbiome. (2023) (0)
- Analysis of fecal, salivary and tissue microbiome in Barrett Esophagus, Dysplasia and Esophageal Adenocarcinoma (2022) (0)
- A translational swine model for Crohn’s disease (2022) (0)
- 1149 THE DIETARY-SHAPED GUT MICROBIOME ACCELERATES THE PROGRESSION FROM BARRETT ESOPHAGUS TO ADENOCARCINOMA VIA SYSTEMIC BILE ACID SIGNALING (2020) (0)
- OP030 Identification of disease-relevant bacterial signatures in gnotobiotic IL-10 deficient mice using fecal samples from IBD patients undergoing hematopoietic stem cell transplantation. (2017) (0)
- 266 Transmissive Crohn's Disease-Like Ileitis Is Caused by Functional Dysbiosis in the Intestinal Microbiota Independent of Inflammation-Driven Paneth Cell Failure (2015) (0)
- Inflammatory bowel diseases (PP-065) (2010) (0)
- 161 Impact of Early Life Intervention With Bifidobacteria on the Structure and Function of Infant Fecal Microbiota (2016) (0)
- M1757 Impact of Luminal and Systemic Iron on the Development of Chronic Ileitis Targeting the Gut Microbial Composition and Stress Response in Intestinal Epithelial Cells (2010) (0)
- Interleukin-26 enhances proinflammatory gene expression and its expression is increased in intestinal inflammation in vivo (2007) (0)
- CAN-Drucksensor für Messungen im Motorraum (2007) (0)
- TNF ΔARE pigs: a translational Crohn`s Disease model. (2023) (0)
- S1710 Low Dietary Iron Inhibits Chronic Experimental Ileitis and Attenuates Endoplasmic Reticulum Stress Responses in Intestinal Epithelial Cells (2008) (0)
- [Not Available]. (2012) (0)
- Gasdruckzylinder, insbesondere in der Art einer Stickstofffeder (2000) (0)
- Immunfunktion und Entzündungsprävention (2013) (0)
- Die Bedeutung des intestinalen Mikrobioms für die Gesundheit des Menschen (2013) (0)
- NF-κB-abhängige Regulation von IP-10 in 3T3-L1 und primären humanen Präadipozyten und Adipozyten (2009) (0)
- Intestinales Mikrobiom (2016) (0)
- Der Darm als Grenzfläche zur Umwelt (2012) (0)
- [Not Available]. (2012) (0)
- Gut Microbial Disruption in Critically Ill Patients with COVID-19-Associated Pulmonary Aspergillosis (2022) (0)
- Strukturierte Lebensstilmodifikation bei Patienten mit Colitis ulcerosa – Eine randomisierte kontrollierte Studie (2019) (0)
- Bioaktive Peptide und Aminosäuren (2013) (0)
- In-vivo-Untersuchungen der probiotischen Effekte von in Milchproteinen mikroverkapselten probiotischen Keimen (2013) (0)
- Heilen mit Darmbakterien? (2013) (0)
- Vitamine und Vitaminoide (2013) (0)
- Author Correction: Auto-aggressive CXCR6+ CD8 T cells cause liver immune pathology in NASH (2021) (0)
- CED als Modellkrankheit für den Verlust der intestinalen Homöostase (2015) (0)
- Probiotic mechanisms in the context of chronic inflammatory bowel disease. (2009) (0)
- Bedeutung des Mikrobioms für Adipositas und Glukosestoffwechsel (2022) (0)
- Stellungnahme zu Acetaldehyd als Aromastoff: Aspekte der Risikobewertung (2022) (0)
- Der Darm als immunkompetentes Grenzflächenorgan (2014) (0)
- Editorial (2013) (0)
- Darmgesundheit und Mikrobiota (2015) (0)
- Probiotika: Quo Vadis....? (2012) (0)
- Aufbau und Funktionen des Darmes (2015) (0)
- Exploring the effects of different bile acids receptor agonists in Non-Alcoholic Steatohepatitis (NASH) and NASH-related hepatocarcinogenesis (2023) (0)
- Probiotics and Immune Function : Insights into Mechanisms of Modulation of Mucosal Immunity by Selected Lactobacilli (2006) (0)
- Involvement of B cells in Non-Alcoholic Steatohepatitis (NASH) (2019) (0)
- Dysbiosis in chronic intestinal inflammation and tumorigenesis: Can we apply Koch's postulates? (2017) (0)
- P059 Diet controls segmented filamentous bacteria in driving Crohn’s disease-like inflammation in TNFdeltaARE mice (2022) (0)
- 215: MITOCHONDRIAL PERTURBATION OF THE EPITHELIUM CAUSES MICROBIAL DYSBIOSIS AND UNRESOLVED TISSUE INJURY IN INTESTINAL INFLAMMATION (2022) (0)
- Die intestinale Mikrobiota als externes „Organ“ (2015) (0)
- 1094 Probiotic Structure Function Analysis Reveals Prtp-Encoded Lactocepin to Mediate Anti-Inflammatory Effects via Selective Degradation of PRO-Inflammatory Chemokines (2012) (0)
- 407 Mitochondrial Unfolded Protein Responses Control Epithelial Stem Cell Proliferation in the Intestine (2014) (0)
- THE INFLUENCE OF INTESTINAL MICROFLORA ON MUCOSAL AND SYSTEMIC IMMUNE RESPONSES (2001) (0)
- 630 Expression of C/EBP Homologous Protein in Intestinal Epithelial Cells is Not Associated With the Development of Chronic Inflammation: A Transgenic Approach (2012) (0)
- E07 Gut microbiota and metabolism at the cross-road between homeostasis and chronic inflammation (2010) (0)
- 258 – Integrated Metabolomic and Microbiome Approach Revealed Functional Signatures Associated with Disease Severity in Inflammatory Bowel Disease (2019) (0)
- Das Mikrobiom bei chronischen Erkrankungen (2016) (0)
- The gut microbiota promotes hepatic fatty acid desaturation and elongation in mice (2018) (0)
- Interactions between the environmental and human microbiota in the preservation of health and genesis of disease: symposium report (2022) (0)
- 276 Immuno-modulatory effects of pre-/probiotics and active microbial structures on human primary keratinocytes (2016) (0)
- Sa1177: HIGH FAT DIET SHAPES GUT MICROBIOME AND ACCELERATES PROGRESSION FROM BARRETT ESOPHAGUS TO ADENOCARCINOMA VIA SYSTEMIC BILE ACIDS (2022) (0)
- Forthcoming papers (2005) (0)
- Identification of fitness determinants in Enterococcus faecalis by differential proteomics (2012) (0)
- Adaptation to ER-stress via serine glycine metabolism licences STING signalling and CMV control in intestinal epithelial cells (2022) (0)
- Sa1875 Postnatal Environment and Genetic-Driven Disease Susceptibility Overwrite the Impact of Maternal Inflammation on Fetal Gut Programming Using a Mouse Model of Crohn's Disease Ileitis (2012) (0)
- Environmental signals rather than layered ontogeny imprint the function of type 2 conventional dendritic cells in young and adult mice (2021) (0)
- PKR-signaling in DSS-induced colitis: detrime-N-tal or prote-C-tive? (2013) (0)
- Sa1752 Colitogenic Activity of Enterococcus Faecalis Requires Lipoprotein-Mediated Activation of Innate Immune Effector Functions in IL-10-/-Mice (2014) (0)
- IKK (cid:1) and Phosphatidylinositol 3-Kinase/Akt Participate in Non-pathogenic Gram-negative Enteric Bacteria-induced RelA Phosphorylation and NF- (cid:2) B Activation in Both Primary and Intestinal Epithelial Cell Lines* (2002) (0)
- Effect of caloric restriction on gut permeability, inflammation markers, and fecal microbiota in obese women (2017) (0)
- Mo1772 Crohn's Disease-Associated Enterococcus Faecalis Strain Trigger Differential Host Response in Germfree and Conventional NOD2 Deficient Mice (2012) (0)
- P540 Longitudinal Dynamics of Gut Microbiome and Metabolome After Biological Therapy in Inflammatory Bowel Diseases (2022) (0)
- 119: MUCOSAL MICROBIOTA ADAPTS TO ATF6-INDUCED ALTERATIONS IN HOST LIPID METABOLISM WITH PROGNOSTIC VALUE IN COLORECTAL CANCER (2022) (0)
- S10 E. faecalis Gelatinase contributes to the development of intestinal inflammation by impairing epithelial barrier function: Role for bacteria-derived proteases in the pathology of IBD (2010) (0)
- Intestinal microbiota in health and disease - Seeding multidisciplinary research in Germany. (2021) (0)
- 84 Mitochondrial Stress Induction in the Epithelium Fuels Endoplasmic Reticulum Unfolded Protein Responses via Double-Stranded RNA-Activated Protein Kinase (PKR) Under Conditions of Chronic Intestinal Inflammation (2010) (0)
- Bedeutung des Mikrobioms für Adipositas und Glukosestoffwechsel (2021) (0)
- Sa1639: EXCLUSIVE ENTERAL NUTRITION DRIVES PROTECTIVE MICROBIOME MODULATION IN PEDIATRIC CROHN'S DISEASE (2022) (0)
- P366 Exclusive enteral nutrition drives protective microbiome modulation in paediatric Crohn’s Disease (2022) (0)
- Regulation of proinflammatory cytokines by commensal and probiotic bacteria (2004) (0)
- Intestinal Microbiome [Intestinales Mikrobiom] (2016) (0)
- Sa1865 – There is More Than Pharmacology: Comprehensive Lifestylemodification in Patients with Ulcerative Colitis – a Randomized Controlled Trial (2019) (0)
- 394: CHANGES IN THE DIET AND THE MICROBIOME WITH URBANISATION IN SOUTH AFRICANS THAT MIGHT ACCOUNT FOR THE INCREASEASING APPEARANCE OF NON-COMMUNICABLE DISEASES (2022) (0)
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What Schools Are Affiliated With Dirk Haller?
Dirk Haller is affiliated with the following schools:
