Eleazar Eskin
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Computer scientist and geneticist
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Computer Science Biology
Eleazar Eskin's Degrees
- PhD Computer Science Stanford University
- Bachelors Computer Science Stanford University
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Why Is Eleazar Eskin Influential?
(Suggest an Edit or Addition)According to Wikipedia, Eleazar Eskin is a computer scientist and geneticist, professor and Chair of the Department of Computational Medicine, and professor of computer science and human genetics at the University of California, Los Angeles. His research focuses on bioinformatics, genomics, and machine learning. A primary research focus is on developing statistical and computational techniques to probe the genetic basis of human disease.
Eleazar Eskin's Published Works
Number of citations in a given year to any of this author's works
Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- Genetic effects on gene expression across human tissues (2017) (2841)
- Genetic effects on gene expression across human tissues (2017) (2841)
- Variance component model to account for sample structure in genome-wide association studies (2010) (2138)
- Efficient Control of Population Structure in Model Organism Association Mapping (2008) (1675)
- Mouse genomic variation and its effect on phenotypes and gene regulation (2011) (1398)
- Assessing computational tools for the discovery of transcription factor binding sites (2005) (1393)
- Whole-Genome Patterns of Common DNA Variation in Three Human Populations (2005) (1218)
- The Spectrum Kernel: A String Kernel for SVM Protein Classification (2001) (1135)
- Data mining methods for detection of new malicious executables (2001) (1101)
- A GEOMETRIC FRAMEWORK FOR UNSUPERVISED ANOMALY DETECTION: DETECTING INTRUSIONS IN UNLABELED DATA (2002) (770)
- A Geometric Framework for Unsupervised Anomaly Detection (2002) (634)
- Mismatch string kernels for discriminative protein classification (2004) (621)
- Comparative Analysis of Proteome and Transcriptome Variation in Mouse (2011) (564)
- Anomaly Detection over Noisy Data using Learned Probability Distributions (2000) (557)
- Random-effects model aimed at discovering associations in meta-analysis of genome-wide association studies. (2011) (488)
- Colocalization of GWAS and eQTL Signals Detects Target Genes (2016) (462)
- Genetic control of obesity and gut microbiota composition in response to high-fat, high-sucrose diet in mice. (2013) (458)
- Chromosome conformation elucidates regulatory relationships in developing human brain (2016) (445)
- A sequence-based variation map of 8.27 million SNPs in inbred mouse strains (2007) (431)
- Integrating Functional Data to Prioritize Causal Variants in Statistical Fine-Mapping Studies (2014) (401)
- Improved linear mixed models for genome-wide association studies (2012) (377)
- Finding composite regulatory patterns in DNA sequences (2002) (372)
- Genome-wide association study of bipolar disorder in European American and African American individuals (2009) (354)
- Mismatch String Kernels for SVM Protein Classification (2002) (354)
- Identifying Causal Variants at Loci with Multiple Signals of Association (2014) (350)
- A comparison of phasing algorithms for trios and unrelated individuals. (2006) (337)
- Using an atlas of gene regulation across 44 human tissues to inform complex disease- and trait-associated variation (2018) (319)
- A high-resolution association mapping panel for the dissection of complex traits in mice. (2010) (310)
- Real time data mining-based intrusion detection (2001) (267)
- Loci associated with skin pigmentation identified in African populations (2017) (253)
- Towards Multidocument Summarization by Reformulation: Progress and Prospects (1999) (251)
- Genetic and environmental control of host-gut microbiota interactions (2015) (250)
- Haplotype reconstruction from genotype data using Imperfect Phylogeny (2004) (236)
- Detecting Text Similarity over Short Passages: Exploring Linguistic Feature Combinations via Machine Learning (1999) (227)
- The impact of sex on gene expression across human tissues (2020) (220)
- Modeling system calls for intrusion detection with dynamic window sizes (2001) (202)
- Whole-genome analysis of Alu repeat elements reveals complex evolutionary history. (2004) (199)
- The impact of rare variation on gene expression across tissues (2016) (197)
- Sparse PCA corrects for cell type heterogeneity in epigenome-wide association studies (2016) (194)
- Rapid and Accurate Multiple Testing Correction and Power Estimation for Millions of Correlated Markers (2009) (180)
- Genome-wide association studies in mice (2012) (172)
- Genome-wide analysis reveals novel genes influencing temporal lobe structure with relevance to neurodegeneration in Alzheimer's disease (2010) (156)
- Accurate Discovery of Expression Quantitative Trait Loci Under Confounding From Spurious and Genuine Regulatory Hotspots (2008) (151)
- Interpreting Meta-Analyses of Genome-Wide Association Studies (2012) (149)
- A model-based approach for analysis of spatial structure in genetic data (2012) (146)
- Computational pan-genomics: status, promises and challenges (2016) (145)
- A Quantitative Proteome Map of the Human Body (2019) (143)
- Efficient reconstruction of haplotype structure via perfect phylogeny. (2002) (133)
- Identification of additional variants within the human dopamine transporter gene provides further evidence for an association with bipolar disorder in two independent samples (2006) (131)
- Hybrid mouse diversity panel: a panel of inbred mouse strains suitable for analysis of complex genetic traits (2012) (127)
- Leveraging molecular quantitative trait loci to understand the genetic architecture of diseases and complex traits (2018) (119)
- Optimal algorithms for haplotype assembly from whole-genome sequence data (2010) (117)
- Mouse Genome-Wide Association and Systems Genetics Identify Asxl2 As a Regulator of Bone Mineral Density and Osteoclastogenesis (2011) (114)
- Population structure in genetic studies: Confounding factors and mixed models (2018) (114)
- The Hybrid Mouse Diversity Panel: a resource for systems genetics analyses of metabolic and cardiovascular traits (2016) (114)
- Genetic Architecture of Atherosclerosis in Mice: A Systems Genetics Analysis of Common Inbred Strains (2015) (113)
- Catecholamine Release–Inhibitory Peptide Catestatin (Chromogranin A352–372): Naturally Occurring Amino Acid Variant Gly364Ser Causes Profound Changes in Human Autonomic Activity and Alters Risk for Hypertension (2007) (113)
- Data mining-based intrusion detectors: an overview of the columbia IDS project (2001) (106)
- Genome-wide association study of Tourette Syndrome (2012) (102)
- Fine Mapping in 94 Inbred Mouse Strains Using a High-Density Haplotype Resource (2010) (102)
- Effectively Identifying eQTLs from Multiple Tissues by Combining Mixed Model and Meta-analytic Approaches (2013) (101)
- Detecting Malicious Software by Monitoring Anomalous Windows Registry Accesses (2002) (100)
- Improved methods for multi-trait fine mapping of pleiotropic risk loci (2016) (98)
- Systematic benchmarking of omics computational tools (2019) (97)
- "Good enough solutions" and the genetics of complex diseases. (2012) (86)
- Critical Assessment of Metagenome Interpretation: the second round of challenges (2021) (86)
- The Minnesota Center for Twin and Family Research Genome-Wide Association Study (2012) (81)
- Identification and Functional Validation of the Novel Antimalarial Resistance Locus PF10_0355 in Plasmodium falciparum (2011) (80)
- A Kernel Approach for Learning from Almost Orthogonal Patterns (2002) (77)
- Large scale reconstruction of haplotypes from genotype data (2003) (75)
- Polymorphisms and Haplotypes of the Regulator of G Protein Signaling-2 Gene in Normotensives and Hypertensives (2006) (75)
- Transcriptome analysis in whole blood reveals increased microbial diversity in schizophrenia (2018) (75)
- The Genetic Basis of Host Preference and Resting Behavior in the Major African Malaria Vector, Anopheles arabiensis (2016) (74)
- Gene networks associated with conditional fear in mice identified using a systems genetics approach (2011) (73)
- Local genetic effects on gene expression across 44 human tissues (2016) (72)
- Cell-type-specific resolution epigenetics without the need for cell sorting or single-cell biology (2018) (70)
- Selection in Europeans on Fatty Acid Desaturases Associated with Dietary Changes (2017) (68)
- Genome-wide analysis highlights contribution of immune system pathways to the genetic architecture of asthma (2020) (68)
- Adaptive Model Generation for Intrusion Detection Systems (2000) (68)
- Leveraging the HapMap correlation structure in association studies. (2007) (67)
- MET: an experimental system for Malicious Email Tracking (2002) (65)
- Identification of causal genes for complex traits (2015) (65)
- Detecting Errors within a Corpus using Anomaly Detection (2000) (64)
- Searching genomes for noncoding RNA using FastR (2005) (63)
- A comparative evaluation of two algorithms for Windows Registry Anomaly Detection (2005) (63)
- High-Resolution Mapping of Gene Expression Using Association in an Outbred Mouse Stock (2008) (62)
- Identification of Novel Genes That Mediate Innate Immunity Using Inbred Mice (2009) (61)
- Widespread Allelic Heterogeneity in Complex Traits. (2017) (60)
- Genome-Wide Association Study Identifies Nox3 as a Critical Gene for Susceptibility to Noise-Induced Hearing Loss (2015) (60)
- MEF: Malicious Email Filter - A UNIX Mail Filter That Detects Malicious Windows Executables (2001) (59)
- Efficient Multiple-Trait Association and Estimation of Genetic Correlation Using the Matrix-Variate Linear Mixed Model (2015) (57)
- Genome-wide association study of monoamine metabolite levels in human cerebrospinal fluid (2014) (55)
- Allele-specific expression and eQTL analysis in mouse adipose tissue (2014) (55)
- Laplace Propagation (2003) (55)
- Increasing Power in Association Studies by Using Linkage Disequilibrium Structure and Molecular Function as Prior Information (2008) (54)
- Population-scale tissue transcriptomics maps long non-coding RNAs to complex disease (2021) (54)
- Improving the usability and archival stability of bioinformatics software (2019) (54)
- Multiple testing correction in linear mixed models (2016) (53)
- Accurate viral population assembly from ultra-deep sequencing data (2014) (52)
- Systems Genetic Analysis of Osteoblast-Lineage Cells (2012) (50)
- Genome‐Wide Association Mapping With Longitudinal Data (2012) (48)
- Genetic variation and gene expression across multiple tissues and developmental stages in a nonhuman primate. (2016) (48)
- An Optimal Weighted Aggregated Association Test for Identification of Rare Variants Involved in Common Diseases (2011) (46)
- Analysis of Allele-Specific Expression in Mouse Liver by RNA-Seq: A Comparison With Cis-eQTL Identified Using Genetic Linkage (2013) (45)
- Dealing with large diagonals in kernel matrices (2003) (44)
- Challenges and recommendations to improve the installability and archival stability of omics computational tools (2019) (43)
- Genome-Wide Analysis of Bacterial Promoter Regions (2002) (41)
- BayesCCE: a Bayesian framework for estimating cell-type composition from DNA methylation without the need for methylation reference (2017) (40)
- Swab-Seq: A high-throughput platform for massively scaled up SARS-CoV-2 testing (2020) (40)
- Meta-Analysis Identifies Gene-by-Environment Interactions as Demonstrated in a Study of 4,965 Mice (2014) (40)
- Genome-wide association mapping of blood cell traits in mice (2013) (40)
- Profiling immunoglobulin repertoires across multiple human tissues using RNA sequencing (2017) (39)
- Increasing the power of meta-analysis of genome-wide association studies to detect heterogeneous effects (2017) (39)
- Using Network Component Analysis to Dissect Regulatory Networks Mediated by Transcription Factors in Yeast (2009) (38)
- Protein Family Classification Using Sparse Markov Transducers (2000) (38)
- Adaptive Model Generation: An Architecture for Deployment of Data Mining-Based Intrusion Detection Systems (2002) (38)
- A machine learning algorithm to increase COVID-19 inpatient diagnostic capacity (2020) (37)
- Diversity, Differentiation, and Linkage Disequilibrium: Prospects for Association Mapping in the Malaria Vector Anopheles arabiensis (2013) (37)
- Analysis of genetic variation in Ashkenazi Jews by high density SNP genotyping (2008) (36)
- Accounting for Population Structure in Gene-by-Environment Interactions in Genome-Wide Association Studies Using Mixed Models (2016) (36)
- A general framework for meta-analyzing dependent studies with overlapping subjects in association mapping. (2013) (35)
- From profiles to patterns and back again: a branch and bound algorithm for finding near optimal motif profiles (2004) (35)
- Increased power of mixed models facilitates association mapping of 10 loci for metabolic traits in an isolated population. (2011) (34)
- Identifying genetic relatives without compromising privacy (2014) (34)
- Massively scaled-up testing for SARS-CoV-2 RNA via next-generation sequencing of pooled and barcoded nasal and saliva samples (2021) (34)
- An integrated -omics analysis of the epigenetic landscape of gene expression in human blood cells (2018) (33)
- Protein Family Classification Using Sparse Markov Transducers (2000) (33)
- Effectively identifying regulatory hotspots while capturing expression heterogeneity in gene expression studies (2014) (32)
- Incorporating prior information into association studies (2012) (32)
- Combining Text Mining and Sequence Analysis to Discover Protein Functional Regions (2003) (32)
- Hypothalamic transcriptomes of 99 mouse strains reveal trans eQTL hotspots, splicing QTLs and novel non-coding genes (2016) (31)
- Genetic implication of a novel thiamine transporter in human hypertension. (2014) (31)
- Imputation aware meta‐analysis of genome‐wide association studies (2010) (30)
- Genome-Wide Association Study for Age-Related Hearing Loss (AHL) in the Mouse: A Meta-Analysis (2014) (30)
- Correcting for cell-type heterogeneity in DNA methylation: a comprehensive evaluation (2017) (30)
- Imputing Phenotypes for Genome-wide Association Studies. (2016) (30)
- Mixed models can correct for population structure for genomic regions under selection (2013) (30)
- Accurate and fast multiple-testing correction in eQTL studies. (2015) (30)
- High-Density Genotypes of Inbred Mouse Strains: Improved Power and Precision of Association Mapping (2015) (29)
- Metalign: efficient alignment-based metagenomic profiling via containment min hash (2020) (29)
- Genome-wide case/control studies in hypertension: only the ‘tip of the iceberg’ (2010) (29)
- Quantitative analysis of 3-dimensional facial soft tissue photographic images: technical methods and clinical application (2015) (28)
- Improving the accuracy and efficiency of partitioning heritability into the contributions of genomic regions. (2013) (28)
- ForestPMPlot: A Flexible Tool for Visualizing Heterogeneity Between Studies in Meta-analysis (2016) (28)
- Limited RNA Editing in Exons of Mouse Liver and Adipose (2013) (28)
- Heritability of periodontal bone loss in mice. (2015) (26)
- Leveraging reads that span multiple single nucleotide polymorphisms for haplotype inference from sequencing data (2013) (25)
- Hap-seq: An Optimal Algorithm for Haplotype Phasing with Imputation Using Sequencing Data (2012) (25)
- Fast and Accurate Construction of Confidence Intervals for Heritability. (2016) (25)
- CNVeM: Copy Number Variation Detection Using Uncertainty of Read Mapping (2012) (25)
- Increasing Power of Genome-Wide Association Studies by Collecting Additional Single-Nucleotide Polymorphisms (2011) (25)
- Efficient algorithms for tandem copy number variation reconstruction in repeat-rich regions (2011) (24)
- Discovering genes involved in disease and the mystery of missing heritability (2015) (24)
- Identifying causal variants by fine mapping across multiple studies (2020) (24)
- Profiling allele specific gene expression in brains from individuals with autism spectrum disorder reveals preferential minor allele usage (2019) (24)
- The Genetic Architecture of Noise-Induced Hearing Loss: Evidence for a Gene-by-Environment Interaction (2016) (24)
- Efficient Association Study Design Via Power‐Optimized Tag SNP Selection (2008) (23)
- Inference and analysis of haplotypes from combined genotyping studies deposited in dbSNP. (2005) (23)
- Incorporation of Biological Knowledge Into the Study of Gene-Environment Interactions (2017) (22)
- MiCoP: microbial community profiling method for detecting viral and fungal organisms in metagenomic samples (2018) (22)
- Mixed-model coexpression: calculating gene coexpression while accounting for expression heterogeneity (2011) (21)
- Addressing the Digital Divide in Contemporary Biology: Lessons from Teaching UNIX. (2017) (21)
- Exploring the phenotypic consequences of tissue specific gene expression variation inferred from GWAS summary statistics (2018) (21)
- A comprehensive analysis of the usability and archival stability of omics computational tools and resources (2018) (21)
- Genetic programming applied to Othello: introducing students to machine learning research (1999) (21)
- Postassociation cleaning using linkage disequilibrium information (2011) (20)
- IEEE/ACM TRANSACTIONS ON (2004) (20)
- Further evidence for association of GRK3 to bipolar disorder suggests a second disease mutation (2007) (20)
- Discovering Single Nucleotide Polymorphisms Regulating Human Gene Expression Using Allele Specific Expression from RNA-seq Data (2016) (19)
- Functional genomic assessment of phosgene-induced acute lung injury in mice. (2013) (19)
- Long single-molecule reads can resolve the complexity of the Influenza virus composed of rare, closely related mutant variants (2016) (19)
- The Genetic Landscape of Hematopoietic Stem Cell Frequency in Mice (2015) (19)
- Applying meta-analysis to genotype-tissue expression data from multiple tissues to identify eQTLs and increase the number of eGenes (2017) (19)
- Word and sentence embedding tools to measure semantic similarity of Gene Ontology terms by their definitions (2018) (18)
- In silico QTL mapping of basal liver iron levels in inbred mouse strains. (2011) (18)
- How bioinformatics and open data can boost basic science in countries and universities with limited resources (2019) (18)
- Combining Strategies for Extracting Relations from Text Collections (2000) (18)
- Hinds , in Three Human Populations Whole-Genome Patterns of Common DNA Variation (2008) (18)
- Efficient and Accurate Multiple-Phenotype Regression Method for High Dimensional Data Considering Population Structure (2016) (18)
- Unsupervised Anomaly Detection Using an Optimized K-Nearest Neighbors Algorithm (18)
- Spatial Localization of Recent Ancestors for Admixed Individuals (2014) (18)
- Assembly of non-unique insertion content using next-generation sequencing (2011) (17)
- EMINIM: An Adaptive and Memory-Efficient Algorithm for Genotype Imputation (2010) (17)
- Increasing Association Mapping Power and Resolution in Mouse Genetic Studies Through the Use of Meta-Analysis for Structured Populations (2012) (17)
- Benchmarking of computational error-correction methods for next-generation sequencing data (2020) (16)
- Increasing Power of Groupwise Association Test with Likelihood Ratio Test (2011) (16)
- The Genetic Architecture of Hearing Impairment in Mice: Evidence for Frequency-Specific Genetic Determinants (2015) (15)
- Improving the usability and comprehensiveness of microbial databases (2018) (15)
- Genotyping common and rare variation using overlapping pool sequencing (2011) (15)
- High-Resolution Association Mapping of Atherosclerosis Loci in Mice (2012) (15)
- Correction: Genetic Architecture of Atherosclerosis in Mice: A Systems Genetics Analysis of Common Inbred Strains (2016) (15)
- Using genomic annotations increases statistical power to detect eGenes (2016) (14)
- Multi-marker tagging single nucleotide polymorphism selection using estimation of distribution algorithms (2010) (14)
- Privacy preserving protocol for detecting genetic relatives using rare variants (2014) (14)
- Using Expression Data to Discover RNA and DNA Regulatory Sequence Motifs (2004) (14)
- PLEIO: a method to map and interpret pleiotropic loci with GWAS summary statistics. (2020) (14)
- Detection and reconstruction of tandemly organized de novo copy number variations (2010) (14)
- Identification of additional variants within the human dopamine transporter gene provides further evidence for an association with bipolar disorder in two independent samples (2006) (14)
- Leveraging allelic imbalance to refine fine-mapping for eQTL studies (2019) (13)
- Genome-wide association study of NMDA receptor coagonists in human cerebrospinal fluid and plasma (2015) (13)
- Total RNA Sequencing reveals microbial communities in human blood and disease specific effects (2016) (12)
- Rapid cost-effective viral genome sequencing by V-seq (2020) (12)
- Discovering tightly regulated and differentially expressed gene sets in whole genome expression data (2007) (12)
- An ancestry‐based approach for detecting interactions (2018) (12)
- Identification of Deletion Polymorphisms from Haplotypes (2007) (12)
- Genome-wide analysis reveals novel genes in fl uencing temporal lobe structure with relevance to neurodegeneration in Alzheimer ' s disease (2010) (12)
- Distant regulatory effects of genetic variation in multiple human tissues (2016) (11)
- IPED: Inheritance Path-based Pedigree Reconstruction Algorithm Using Genotype Data (2013) (11)
- Adaptive Model Generation (2002) (11)
- IPED: Inheritance Path Based Pedigree Reconstruction Algorithm Using Genotype Data (2013) (11)
- Natural Variation within the Neuronal Nicotinic Acetylcholine Receptor Cluster on Human Chromosome 15q24: Influence on Heritable Autonomic Traits in Twin Pairs (2009) (11)
- Hap-seqX: expedite algorithm for haplotype phasing with imputation using sequence data. (2013) (11)
- Optimally Phasing Long Genomic Regions using Local Haplotype Predictions (2008) (11)
- Large Scale Recovery of Haplotypes from Genotype Data using Imperfect (2002) (11)
- HapIso: An Accurate Method for the Haplotype- Specific Isoforms Reconstruction From Long Single-Molecule Reads (2016) (9)
- Mapping Genetic Variants Associated with Beta-Adrenergic Responses in Inbred Mice (2012) (9)
- Rare Variant Association Testing Under Low-Coverage Sequencing (2013) (9)
- Detecting the Presence and Absence of Causal Relationships between Expression of Yeast Genes with Very Few Samples (2009) (9)
- Efficient Genome Wide Tagging by Reduction to SAT (2008) (9)
- Using mixtures of common ancestors for estimating the probabilities of discrete events in biological sequences (2001) (8)
- Linkage Effects and Analysis of Finite Sample Errors in the HapMap (2009) (8)
- The Homology Kernel: A Biologically Motivated Sequence Embedding into Euclidean Space (2005) (8)
- Joint Fine Mapping of GWAS and eQTL Detects Target Gene and Relevant Tissue (2016) (8)
- Genetic variation and gene expression across multiple tissues and developmental stages in a non-human primate (2016) (8)
- Efficiently Identifying Significant Associations in Genome-Wide Association Studies (2013) (8)
- The spectrum kernel (2002) (7)
- Widespread allelic heterogeneity in complex traits (2016) (7)
- Gene-Gene Interactions Detection Using a Two-Stage Model (2014) (7)
- Genome reassembly with high-throughput sequencing data (2013) (7)
- Sparse sequence modeling with applications to computational biology and intrusion detection (2002) (7)
- Pacific symposium on biocomputing 2011 (2011) (7)
- A Note on Phasing Long Genomic Regions Using Local Haplotype Predictions (2006) (7)
- Finding associated variants in genome-wide association studies on multiple traits (2018) (7)
- Challenges and recommendations to improve installability and archival stability of omics computational tools (2018) (7)
- Integrated Computational and Experimental Analysis of the Neuroendocrine Transcriptome in Genetic Hypertension Identifies Novel Control Points for the Cardiometabolic Syndrome (2012) (7)
- Pre-existing conditions in Hispanics/Latinxs that are COVID-19 risk factors (2021) (7)
- Annotating Gene Ontology terms for protein sequences with the Transformer model (2020) (6)
- Dumpster diving in RNA-sequencing to find the source of every last read (2016) (6)
- Robust Mendelian randomization in the presence of residual population stratification, batch effects and horizontal pleiotropy (2020) (6)
- VGA: A method for viral quasispecies assembly from ultra-deep sequencing data (2014) (6)
- Characterization of Expression Quantitative Trait Loci in Pedigrees from Colombia and Costa Rica Ascertained for Bipolar Disorder (2016) (6)
- Fast pairwise IBD association testing in genome-wide association studies (2014) (6)
- Discrete profile comparison using information bottleneck (2006) (6)
- IPED2: Inheritance Path Based Pedigree Reconstruction Algorithm for Complicated Pedigrees (2014) (6)
- Leveraging molecular QTL to understand the genetic architecture of diseases and complex traits (2017) (6)
- Evaluating Representations for Gene Ontology Terms (2019) (6)
- 0355 in Plasmodium falciparum (2011) (6)
- Analysis of multiple fungal sequence repositories highlights shortcomings in microbial databases (2018) (5)
- MiCoP: microbial community profiling method for detecting viral and fungal organisms in metagenomic samples (2019) (5)
- Systems Biology and Regulatory Genomics, Joint Annual RECOMB 2005 Satellite Workshops on Systems Biology and on Regulatory Genomics, San Diego, CA, USA; December 2-4, 2005, Revised Selected Papers (2006) (5)
- eALPS: Estimating Abundance Levels in Pooled Sequencing Using Available Genotyping Data (2013) (5)
- Hybrid mouse diversity panel: a panel of inbred mouse strains suitable for analysis of complex genetic traits (2012) (5)
- Accurate modeling of replication rates in genome-wide association studies by accounting for Winner’s Curse and study-specific heterogeneity (2019) (5)
- A novel Word2vec based tool to estimate semantic similarity of genes by using Gene Ontology terms (2017) (5)
- An Association Mapping Framework To Account for Potential Sex Difference in Genetic Architectures (2018) (5)
- A GWAS approach identifies Dapp1 as a determinant of air pollution-induced airway hyperreactivity (2019) (5)
- A comprehensive benchmarking of WGS-based deletion structural variant callers (2022) (4)
- Ensemble neural network model for detecting thyroid eye disease using external photographs (2022) (4)
- Respecting Markov Equivalence in Computing Posterior Probabilities of Causal Graphical Features (2010) (4)
- Review: Population Structure in Genetic Studies: Confounding Factors and Mixed Models (2016) (4)
- UMI-Reducer: Collapsing duplicate sequencing reads via Unique Molecular Identifiers (2017) (4)
- The genetic basis of host choice and resting behavior in the major African malaria vector, Anopheles arabiensis (2016) (4)
- Genetic Determinants of Ammonia-Induced Acute Lung Injury in Mice. (2020) (4)
- Multiple Testing in Genetic Epidemiology (2010) (3)
- A comprehensive benchmarking of WGS-based structural variant callers (2020) (3)
- Effective Algorithms for Fusion Gene Detection (2010) (3)
- Correction: Genome-Wide Association Study Identifies Nox3 as a Critical Gene for Susceptibility to Noise-Induced Hearing Loss (2015) (3)
- Involving undergraduates in genomics research to narrow the education–research gap (2018) (3)
- ROP: dumpster diving in RNA-sequencing to find the source of 1 trillion reads across diverse adult human tissues (2018) (3)
- An Adaptive and Memory Efficient Algorithm for Genotype Imputation (2009) (3)
- Efficient genotyping of individuals using overlapping pool sequencing and imputation (2012) (3)
- Genome-wide association mapping of blood cell traits in mice (2013) (2)
- Learning Representations for Gene Ontology Terms by Contextualized Text Encoders (2019) (2)
- HapIso: An Accurate Method for the Haplotype- Specific Isoforms Reconstruction From Long Single-Molecule Reads. (2017) (2)
- IPEDX: An exact algorithm for pedigree reconstruction using genotype data (2013) (2)
- IPED2X: A robust pedigree reconstruction algorithm for complicated pedigrees (2014) (2)
- Web based Malware Detection using Important Supervised Learning Techniques on Online Web Traffic (2016) (2)
- The Multivariate Normal Distribution Framework for Analyzing Association Studies (2017) (2)
- resting behavior in the major African malaria vector (2016) (2)
- MARS: leveraging allelic heterogeneity to increase power of association testing (2018) (2)
- Efficient and Accurate Multiple-Phenotypes Regression Method for High Dimensional Data Considering Population Structure (2015) (2)
- Using bioinformatics training to boost research capacities in resource-limited regions (2018) (2)
- Discrete profile alignment via constrained information bottleneck (2004) (2)
- Incorporating homologues into Sequence Embeddings for protein Analysis (2007) (2)
- Fast and accurate construction of confidence intervals for heritability (2015) (2)
- A Unifying Framework for Imputing Summary Statistics in Genome-Wide Association Studies (2020) (2)
- A method to map and interpret pleiotropic loci using summary statistics of multiple traits (2020) (2)
- Benchmarking of computational error-correction methods for next-generation sequencing via unique molecular identifiers (2019) (2)
- Large-scale Genetic Analysis Identifies 66 Novel Loci for Asthma (2019) (2)
- Leveraging allele-specific expression to refine fine-mapping for eQTL studies (2018) (2)
- Packaging, containerization, and virtualization of computational omics methods: Advances, challenges, and opportunities (2022) (2)
- HapIso: An Accurate Method for the Haplotype-Specific Isoforms Reconstruction from Long Single-Molecule Reads (2016) (2)
- Increasing Power of Genome-wide Association Studies by Collecting Additional SNPs (2011) (2)
- Lecture Notes in Bioinformatics (Subseries of Lecture Notes in Computer Science): Preface (2005) (2)
- Towards reproducible, transparent, and systematic benchmarking of omics computational tools (2018) (2)
- Using HLA binding prediction algorithms for epitope mapping in HIV vaccine clinical trials (2011) (1)
- Pevzner evolutionary history repeat elements reveals complexAluWhole-genome analysis of data (2004) (1)
- A Spatial-Aware Haplotype Copying Model with Applications to Genotype Imputation (2014) (1)
- Improving Imputation Accuracy by Inferring Causal Variants in Genetic Studies (2019) (1)
- Reconstruction of influenza a virus variants from PacBio reads (2014) (1)
- BayesCCE: a Bayesian framework for estimating cell-type composition from DNA methylation without the need for methylation reference (2018) (1)
- Metalign: efficient alignment-based metagenomic profiling via containment min hash (2020) (1)
- Epigenomic and chromosomal architectural reconfiguration in developing human frontal cortex and hippocampus (2022) (1)
- Classifying Text Documents using Modular Categories and Linguistically Motivated Indicators. (1998) (1)
- Best practices for conducting benchmarking in the most comprehensive and reproducible way (2017) (1)
- Benchmarking of computational error-correction methods for next-generation sequencing data (2020) (1)
- Calling differential DNA methylation at cell-type resolution: addressing misconceptions and best practices (2021) (1)
- RNA-seq data science: From raw data to effective interpretation (2023) (1)
- Leveraging pleiotropy for joint analysis of genome-wide association studies with per trait interpretations (2022) (1)
- 10 Years of the International Conference on Research in Computational Molecular Biology (RECOMB) (2006) (1)
- Selection on the FADS region in Europeans (2016) (1)
- Metalign version 0.12.5 (Publication version) (2020) (1)
- 2SNV: Quasispecies reconstruction from PacBio reads (2015) (1)
- Separation of overlapping subpopulations by mutual information (2005) (1)
- Using Substitution Matrices to Estimate Probability Distributions for Biological Sequences (2002) (1)
- in the major African malaria vector, Anopheles (2016) (1)
- Microbiome/Metabolic Syndrome/Diabetes and CVD (2015) (1)
- Author Correction: Profiling immunoglobulin repertoires across multiple human tissues using RNA sequencing (2020) (1)
- Correction to: Improving the usability and comprehensiveness of microbial databases (2020) (1)
- Reconstructing the Phylogeny of Mobile Elements (2007) (1)
- Allele-specific expression and eQTL analysis in mouse adipose tissue (2014) (1)
- Simultaneous Modeling of Disease Status and Clinical Phenotypes To Increase Power in Genome-Wide Association Studies (2017) (1)
- An Ancestry Based Approach for Detecting Interactions (2016) (1)
- Effectively identifying regulatory hotspots while capturing expression heterogeneity in gene expression studies (2014) (1)
- Genomic epidemiology of the Los Angeles COVID-19 outbreak and the early history of the B.1.43 strain in the USA (2020) (1)
- Comprehensive analysis of RNA-sequencing to find the source of 1 trillion reads across diverse adult human tissues (2017) (1)
- Issue Highlights (2019) (0)
- Proceedings of the 2005 joint annual satellite conference on Systems biology and regulatory genomics (2005) (0)
- Systematic benchmarking of omics computational tools (2019) (0)
- Systems Biology and Regulatory Genomics: Joint Annual RECOMB 2005 Satellite Workshops on Systems Biology and on Regulatory Genomics, San Diego, CA, USA, ... Papers (Lecture Notes in Computer Science) (2007) (0)
- On the application of estimation of distribution algorithms to multi-marker tagging SNP selection (2009) (0)
- An integrated -omics analysis of the epigenetic landscape of gene expression in human blood cells (2018) (0)
- Genome reassembly with high-throughput sequencing data (2013) (0)
- 3D Printing as an Effective Quality Assurance Implementation in Massive-Scale SARS-CoV-2 Testing at a SwabSeq Next-Generation Sequencing Laboratory. (2023) (0)
- Unlocking the diagnostic and therapeutic potential of metagenomics (2019) (0)
- Title Genotyping common and rare variation using overlapping pool sequencing Permalink (2011) (0)
- Correction: Mapping Genetic Variants Associated with Beta-Adrenergic Responses in Inbred Mice (2014) (0)
- Addressing the digital divide in contemporary biology: Lessons from teaching UNIX (2017) (0)
- Projecting hospital resource utilization during a surge using parametric bootstrapping (2020) (0)
- PERSONAL GENOMICS – Session Introduction (2009) (0)
- Genome-wide analysis highlights contribution of immune system pathways to the genetic architecture of asthma (2020) (0)
- Memory efficient assembly of human genome (2013) (0)
- Leveraging molecular quantitative trait loci to understand the genetic architecture of diseases and complex traits (2018) (0)
- Dete ting Mali ious Software by MonitoringAnomalous Windows Registry (2001) (0)
- Multiple testing correction in linear mixed models (2016) (0)
- A unifying framework for summary statistic imputation (2018) (0)
- Quantitative analysis of 3-dimensional facial soft tissue photographic images: technical methods and clinical application (2015) (0)
- Explorer Mouse genomic variation and its effect on phenotypes and gene regulation (2017) (0)
- BIOINFORMATICS Optimal algorithms for haplotype assembly from whole-genome sequence data (2010) (0)
- Works Title Assembly of non-unique insertion content using next-generation sequencing (2011) (0)
- Applications of High-Fidelity Sequencing Protocol to RNA Viruses (2016) (0)
- Improving the usability and comprehensiveness of microbial databases (2020) (0)
- Olmec Pottery Production and Export in Ancient Mexico Determined Through Elemental Analysis (2005) (0)
- Proceedings of the 2004 RECOMB international conference on Regulatory Genomics (2004) (0)
- Genomic epidemiology of the Los Angeles COVID-19 outbreak and the early history of the B.1.43 strain in the USA (2022) (0)
- Religion Skills and Hobbies Popular Lore Biographies Official Documents Academic Prose General Fiction Mystery Fiction Science Fiction Adventure Fiction Romantic Fiction Humor Personal Letters Professional Letters (2003) (0)
- Correction to: Improving the usability and comprehensiveness of microbial databases (2020) (0)
- Fast and accurate construction of confidence intervals for heritability November 23 , 2015 (2015) (0)
- 1 Genetic and environmental control of host-gut microbiota interactions 1 (2015) (0)
- Detecting Inversions in Human Genome (2008) (0)
- ABSTRACTS FROM THE TWENTY-SECOND ANNUAL MEETING OF THE INTERNATIONAL GENETIC EPIDEMIOLOGY SOCIETY (2013) (0)
- Computational challenges in genomic analysis for the discovery of the genetic basis of human disease (2010) (0)
- Regulatory Genomics: RECOMB 2004 International Workshop, RRG 2004, San Diego, CA, USA, March 26-27, 2004, Revised Selected Papers (Lecture Notes in Computer Science / Lecture Notes in Bioinformatics) (2005) (0)
- Model-based multiple variants test considering causal status (2018) (0)
- A linear mixed model approach to gene expression-tumor aneuploidy association studies (2019) (0)
- P-198 MP-2: Polymorphisms at the chromogranin A and B loci are risk factors for hypertensive end-stage renal disease in African Americans (2005) (0)
- IPED2: inheritance path based pedigree reconstruction algorithm for complicated pedigrees (2014) (0)
- Genetic pathways regulating the longitudinal acquisition of cocaine self-administration in inbred and recombinant inbred mice (2022) (0)
- human-associated microbiomes at an unprecedented scale. Together with a significant reduction in cost of sequencing technologies and development of advanced gene-editing tools, the potential of leveraging human-associated microbiome data for development of novel diagnostic and therapeutic tools (0)
- Bruins-in-Genomics: Evaluation of the impact of a UCLA undergraduate summer program in computational biology on participating students (2022) (0)
- Improving the usability and archival stability of bioinformatics software (2019) (0)
- Letter from the editor Index of experts (2007) (0)
- How bioinformatics and open data can boost basic science in countries and universities with limited resources (2019) (0)
- Applying meta-analysis to Genotype-Tissue Expression data from multiple tissues to find eQTLs and eGenes (2017) (0)
- Dealing with large diagonals in kernel matrices : New trends in statistical information processing (2003) (0)
- Informatique et communication mobiles (2002) (0)
- A Spatial Haplotype Copying Model with Applications to Genotype Imputation (2015) (0)
- 1 An Ancestry Based Approach for Detecting Interactions 1 2 (2016) (0)
- Leveraging pleiotropy in genome-wide association studies in multiple traits with per trait interpretations (2020) (0)
- Characterization of expression quantitative trait loci in extensively phenotyped pedigrees ascertained for bipolar disorder (2015) (0)
- Leveraging family data to design Mendelian Randomization that is provably robust to population stratification (2023) (0)
- C12) United States Patent (2013) (0)
- Intrusion Dete tion with Unlabeled Data Using (2001) (0)
- A Kernel Approa h for Learning From AlmostOrthogonal (2002) (0)
- Known and Unknown Confounders in Genetic Studies (2014) (0)
- MARS: leveraging allelic heterogeneity to increase power of association testing (2021) (0)
- JPET # 157271 1 Natural variation within the neuronal nicotinic acetylcholine receptor cluster on human chromosome 15 q 24 : Influence on heritable autonomic traits in twin pairs (2009) (0)
- Metagenomics for clinical diagnostics: technologies and informatics. (2019) (0)
- for a gene-by-environment interaction. 2 (2016) (0)
- BIOINFORMATICS Incorporating prior information into association studies (2012) (0)
- Profiling immunoglobulin repertoires across multiple human tissues using RNA sequencing (2020) (0)
- A comprehensive overview of computational tools for RNA-seq analysis (2020) (0)
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