Eric Westhof
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Chemistry Biology
Eric Westhof's Degrees
- PhD Biochemistry University of Strasbourg
- Masters Biochemistry University of Strasbourg
- Bachelors Chemistry University of Strasbourg
Why Is Eric Westhof Influential?
(Suggest an Edit or Addition)According to Wikipedia, Éric Westhof is a French biochemist born in Uccle on July 25, 1948. He is a member of the Academie des sciences, head of Education and Training and a member of the Board of Directors of the "La Main à la pâte" Foundation. He is professor emeritus of structural biochemistry at the University of Strasbourg at the Institute of Molecular and Cellular Biology.
Eric Westhof's Published Works
Number of citations in a given year to any of this author's works
Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- Genome evolution in yeasts (2004) (1583)
- Halogen bonds in biological molecules. (2004) (1344)
- Modelling of the three-dimensional architecture of group I catalytic introns based on comparative sequence analysis. (1990) (1106)
- Single Processing Center Models for Human Dicer and Bacterial RNase III (2004) (957)
- Geometric nomenclature and classification of RNA base pairs. (2001) (930)
- The non-Watson-Crick base pairs and their associated isostericity matrices. (2002) (718)
- A standard reference frame for the description of nucleic acid base-pair geometry. (2001) (549)
- Hierarchy and dynamics of RNA folding. (1997) (547)
- Correlation between segmental mobility and the location of antigenic determinants in proteins (1984) (538)
- Crystallographic refinement of yeast aspartic acid transfer RNA. (1985) (399)
- The building blocks and motifs of RNA architecture. (2006) (357)
- Crystal structure of paromomycin docked into the eubacterial ribosomal decoding A site. (2001) (349)
- Crystal structures of complexes between aminoglycosides and decoding A site oligonucleotides: role of the number of rings and positive charges in the specific binding leading to miscoding (2005) (320)
- Structure of Monomeric Yeast and Mammalian Sec61 Complexes Interacting with the Translating Ribosome (2009) (300)
- A new understanding of the decoding principle on the ribosome (2012) (300)
- Topology of three-way junctions in folded RNAs. (2006) (293)
- Analysis of RNA motifs. (2003) (288)
- Tools for the automatic identification and classification of RNA base pairs (2003) (288)
- Biogenesis of Circular RNAs (2014) (287)
- The Dynamic Landscapes of RNA Architecture (2009) (286)
- New loop-loop tertiary interactions in self-splicing introns of subgroup IC and ID: a complete 3D model of the Tetrahymena thermophila ribozyme. (1996) (276)
- Sequence elements outside the hammerhead ribozyme catalytic core enable intracellular activity (2003) (260)
- Plasticity of Animal Genome Architecture Unmasked by Rapid Evolution of a Pelagic Tunicate (2010) (254)
- A novel RNA structural motif in the selenocysteine insertion element of eukaryotic selenoprotein mRNAs. (1996) (243)
- RNA-Puzzles: a CASP-like evaluation of RNA three-dimensional structure prediction. (2012) (235)
- Recurrent structural RNA motifs, Isostericity Matrices and sequence alignments (2005) (232)
- RNA–RNA interaction is required for the formation of specific bicoid mRNA 3′ UTR–STAUFEN ribonucleoprotein particles (1997) (231)
- Water: an integral part of nucleic acid structure. (1988) (228)
- TectoRNA: modular assembly units for the construction of RNA nano-objects. (2001) (223)
- Involvement of a GNRA tetraloop in long-range RNA tertiary interactions. (1994) (223)
- Water and ion binding around RNA and DNA (C,G) oligomers. (2000) (221)
- Derivation of the three-dimensional architecture of bacterial ribonuclease P RNAs from comparative sequence analysis. (1998) (221)
- Comparative genomics of protoploid Saccharomycetaceae. (2009) (221)
- A three-dimensional model for the hammerhead ribozyme based on fluorescence measurements. (1994) (214)
- Cryo-EM structure and rRNA model of a translating eukaryotic 80S ribosome at 5.5-Å resolution (2010) (203)
- Crystal structure of a complex between the aminoglycoside tobramycin and an oligonucleotide containing the ribosomal decoding a site. (2002) (203)
- Frequency and isostericity of RNA base pairs (2009) (200)
- Structure of the ribosome-bound cricket paralysis virus IRES RNA (2006) (189)
- A common motif organizes the structure of multi-helix loops in 16 S and 23 S ribosomal RNAs. (1998) (188)
- RNA as a Drug Target: The Case of Aminoglycosides (2003) (186)
- Sequence elements outside the hammerhead ribozyme catalytic core enable intracellular activity (2003) (184)
- Assemble: an interactive graphical tool to analyze and build RNA architectures at the 2D and 3D levels (2010) (182)
- Exact method for the calculation of pseudorotation parameters P, τm and their errors. A comparison of the Altona–Sundaralingam and Cremer–Pople treatment of puckering of five-membered rings (1981) (178)
- Predicting location of continuous epitopes in proteins from their primary structures. (1991) (172)
- Aminoglycoside-RNA interactions. (1999) (170)
- An integrated, structure- and energy-based view of the genetic code (2016) (169)
- Structural Basis of Ligand Discrimination by Two Related RNA Aptamers Resolved by NMR Spectroscopy (1996) (168)
- Crystal structure of geneticin bound to a bacterial 16S ribosomal RNA A site oligonucleotide. (2003) (167)
- Correlation between the location of antigenic sites and the prediction of turns in proteins. (1993) (167)
- RNA-Puzzles Round II: assessment of RNA structure prediction programs applied to three large RNA structures (2015) (165)
- RNA-Puzzles Round III: 3D RNA structure prediction of five riboswitches and one ribozyme. (2017) (158)
- Aminoglycoside binding to the hammerhead ribozyme: a general model for the interaction of cationic antibiotics with RNA. (1998) (157)
- Comparative genomics of emerging pathogens in the Candida glabrata clade (2013) (157)
- Primary, Secondary, and Tertiary Structures of tRNAs (1995) (153)
- RNA tectonics: towards RNA design. (1996) (150)
- Visualization of macromolecular structures (2010) (150)
- Sequence to Structure (S2S): display, manipulate and interconnect RNA data from sequence to structure (2005) (149)
- Restrained refinement of two crystalline forms of yeast aspartic acid and phenylalanine transfer RNA crystals. (1987) (147)
- New metrics for comparing and assessing discrepancies between RNA 3D structures and models. (2009) (142)
- Statistical analysis of atomic contacts at RNA–protein interfaces (2001) (142)
- RNA as a drug target: chemical, modelling, and evolutionary tools. (1998) (141)
- RNA hydration: three nanoseconds of multiple molecular dynamics simulations of the solvated tRNA(Asp) anticodon hairpin. (1997) (133)
- High-resolution cryo-electron microscopy structure of the Trypanosoma brucei ribosome (2013) (132)
- The Molecular Basis for A‐Site Mutations Conferring Aminoglycoside Resistance: Relationship between Ribosomal Susceptibility and X‐ray Crystal Structures (2003) (132)
- RNA Structure: Advances and Assessment of 3D Structure Prediction. (2017) (130)
- Localization of eukaryote-specific ribosomal proteins in a 5.5-Å cryo-EM map of the 80S eukaryotic ribosome (2010) (130)
- Molecular recognition of aminoglycoside antibiotics by ribosomal RNA and resistance enzymes: an analysis of x-ray crystal structures. (2003) (130)
- Non-canonical interactions in a kissing loop complex: the dimerization initiation site of HIV-1 genomic RNA. (1997) (130)
- Assembly of core helices and rapid tertiary folding of a small bacterial group I ribozyme (2003) (130)
- A pH-responsive riboregulator. (2009) (127)
- Rules governing the orientation of the 2'-hydroxyl group in RNA. (1997) (127)
- Conserved geometrical base-pairing patterns in RNA (1998) (126)
- A three-dimensional model of hepatitis delta virus ribozyme based on biochemical and mutational analyses (1994) (126)
- Simulations of the molecular dynamics of nucleic acids. (1998) (125)
- MANIP: an interactive tool for modelling RNA. (1998) (125)
- Water and Biological Macromolecules (1993) (124)
- A three‐dimensional perspective on exon binding by a group II self‐splicing intron (2000) (118)
- Recent Advances in Mitochondrial Aminoacyl-tRNA Synthetases and Disease. (2017) (118)
- Structural basis for the specificity of the initiation of HIV‐1 reverse transcription (1999) (117)
- RNA folding: beyond Watson-Crick pairs. (2000) (117)
- Molecular modeling of the three-dimensional structure of the bacterial RNase P holoenzyme. (2003) (117)
- Novel base-pairing interactions at the tRNA wobble position crucial for accurate reading of the genetic code (2016) (117)
- Computer modeling from solution data of spinach chloroplast and of Xenopus laevis somatic and oocyte 5 S rRNAs. (1989) (117)
- iSpinach: a fluorogenic RNA aptamer optimized for in vitro applications (2016) (116)
- The 5S rRNA loop E: chemical probing and phylogenetic data versus crystal structure. (1998) (114)
- Docking of cationic antibiotics to negatively charged pockets in RNA folds. (1999) (114)
- Effects of magnesium ions on the stabilization of RNA oligomers of defined structures. (2002) (113)
- RNAML: a standard syntax for exchanging RNA information. (2002) (112)
- A Tyrosyl-tRNA Synthetase Recognizes a Conserved tRNA-like Structural Motif in the Group I Intron Catalytic Core (1996) (110)
- Anion binding to nucleic acids. (2004) (109)
- The interaction networks of structured RNAs (2006) (108)
- Mutations in signal recognition particle SRP54 cause syndromic neutropenia with Shwachman-Diamond–like features (2017) (107)
- Progression of a loop–loop complex to a four‐way junction is crucial for the activity of a regulatory antisense RNA (2000) (106)
- Yeast tRNAAsp tertiary structure in solution and areas of interaction of the tRNA with aspartyl-tRNA synthetase. A comparative study of the yeast phenylalanine system by phosphate alkylation experiments with ethylnitrosourea. (1985) (106)
- Singly and bifurcated hydrogen-bonded base-pairs in tRNA anticodon hairpins and ribozymes. (1999) (105)
- Alternating d(G‐A) sequences form a parallel‐stranded DNA homoduplex. (1992) (105)
- Deciphering RNA recognition: aminoglycoside binding to the hammerhead ribozyme. (1998) (105)
- Exploration of metal ion binding sites in RNA folds by Brownian-dynamics simulations. (1998) (101)
- A potential RNA drug target in the hepatitis C virus internal ribosomal entry site. (2000) (100)
- On the wobble GoU and related pairs. (2000) (100)
- Water and ion binding around r(UpA)12 and d(TpA)12 oligomers--comparison with RNA and DNA (CpG)12 duplexes. (2001) (99)
- A quantitative RNA code for mRNA target selection by the germline fate determinant GLD‐1 (2011) (99)
- Non-Watson-Crick base pairs in RNA-protein recognition. (1999) (98)
- Pichia sorbitophila, an Interspecies Yeast Hybrid, Reveals Early Steps of Genome Resolution After Polyploidization (2012) (98)
- Importance of potassium ions for ribosome structure and function revealed by long-wavelength X-ray diffraction (2019) (98)
- An unusual RNA tertiary interaction has a role for the specific aminoacylation of a transfer RNA. (1993) (96)
- Restrained refinement of the monoclinic form of yeast phenylalanine transfer RNA. Temperature factors and dynamics, coordinated waters, and base-pair propeller twist angles. (1986) (94)
- Docking of aminoglycosides to hydrated and flexible RNA. (2006) (94)
- Dimerization of HIV-1 genomic RNA of subtypes A and B: RNA loop structure and magnesium binding. (1999) (93)
- The viral protein NSP1 acts as a ribosome gatekeeper for shutting down host translation and fostering SARS-CoV-2 translation (2020) (91)
- Antibacterial aminoglycosides with a modified mode of binding to the ribosomal-RNA decoding site. (2004) (91)
- RNA pseudoknots (1992) (91)
- The RNA polymerase III-dependent family of genes in hemiascomycetes: comparative RNomics, decoding strategies, transcription and evolutionary implications (2006) (89)
- The ribozyme core of group II introns: a structure in want of partners. (2009) (89)
- Structural insights into the translational infidelity mechanism (2015) (89)
- Unusual helical packing in crystals of DNA bearing a mutation hot spot (1989) (88)
- Functional Hammerhead Ribozymes Naturally Encoded in the Genome of Arabidopsis thalianaw⃞ (2005) (88)
- An unusual structure formed by antisense-target RNA binding involves an extended kissing complex with a four-way junction and a side-by-side helical alignment. (2000) (86)
- Monitoring of the cooperative unfolding of the sunY group I intron of bacteriophage T4. The active form of the sunY ribozyme is stabilized by multiple interactions with 3' terminal intron components. (1993) (86)
- Inter-domain cross-linking and molecular modelling of the hairpin ribozyme. (1997) (86)
- Sequence-based identification of 3D structural modules in RNA with RMDetect (2011) (85)
- MULTIPLE MOLECULAR DYNAMICS SIMULATIONS OF THE ANTICODON LOOP OF TRNAASP IN AQUEOUS SOLUTION WITH COUNTERIONS (1995) (85)
- PREDITOP: a program for antigenicity prediction. (1993) (84)
- The Mg2+ binding sites of the 5S rRNA loop E motif as investigated by molecular dynamics simulations. (2003) (83)
- Unique secondary and tertiary structural features of the eucaryotic selenocysteine tRNA(Sec). (1993) (83)
- Symmetric K+ and Mg2+ ion-binding sites in the 5S rRNA loop E inferred from molecular dynamics simulations. (2004) (83)
- Molecular Dynamics Simulations of the Anticodon Hairpin of tRNAAsp: Structuring Effects of C−H···O Hydrogen Bonds and of Long-Range Hydration Forces (1996) (81)
- Binding of Escherichia coli ribosomal protein S8 to 16 S rRNA. A model for the interaction and the tertiary structure of the RNA binding site. (1987) (81)
- Three-dimensional model of Escherichia coli ribosomal 5 S RNA as deduced from structure probing in solution and computer modeling. (1991) (80)
- The RNA Ontology Consortium: an open invitation to the RNA community. (2006) (78)
- In-line alignment and Mg2+ coordination at the cleavage site of the env22 twister ribozyme (2014) (77)
- A PNPase Dependent CRISPR System in Listeria (2014) (76)
- RNA 3D Structure Analysis and Prediction (2012) (76)
- Metal ion binding to RNA. (2011) (76)
- Molecular contacts between antibiotics and the 30S ribosomal particle. (2006) (75)
- Solution structure of the 3'-end of brome mosaic virus genomic RNAs. Conformational mimicry with canonical tRNAs. (1994) (75)
- An mRNA Is Capped by a 2', 5' Lariat Catalyzed by a Group I-Like Ribozyme (2005) (73)
- Solution structure of mRNA hairpins promoting selenocysteine incorporation in Escherichia coli and their base-specific interaction with special elongation factor SELB. (1996) (73)
- Hydration of RNA base pairs. (1998) (72)
- Calculations of nucleic acid conformations. (1996) (72)
- An extended structural signature for the tRNA anticodon loop. (2001) (71)
- Solution structure of selenocysteine-inserting tRNA(Sec) from Escherichia coli. Comparison with canonical tRNA(Ser). (1993) (71)
- Antibiotic inhibition of RNA catalysis: neomycin B binds to the catalytic core of the td group I intron displacing essential metal ions. (1998) (71)
- A molecular dynamics simulation study of an aminoglycoside/A-site RNA complex: conformational and hydration patterns. (2006) (69)
- Mutagenesis of 16S rRNA C1409-G1491 base-pair differentiates between 6'OH and 6'NH3+ aminoglycosides. (2005) (69)
- H-bond stability in the tRNA(Asp) anticodon hairpin: 3 ns of multiple molecular dynamics simulations. (1996) (68)
- Two conformational states in the crystal structure of the Homo sapiens cytoplasmic ribosomal decoding A site (2006) (66)
- DRAWNA: a program for drawing schematic views of nucleic acids. (1994) (66)
- Solvation of the left-handed hexamer d(5BrC-G-5BrC-G-5 BrC-G) in crystals grown at two temperatures. (1986) (66)
- Binding of Neomycin-Class Aminoglycoside Antibiotics to Mutant Ribosomes with Alterations in the A Site of 16S rRNA (2006) (66)
- Three-dimensional working model of M1 RNA, the catalytic RNA subunit of ribonuclease P from Escherichia coli. (1994) (66)
- Binding of manganese(II) to a tertiary stabilized hammerhead ribozyme as studied by electron paramagnetic resonance spectroscopy. (2005) (65)
- Somatic mutation in human T-cell leukemia virus type 1 provirus and flanking cellular sequences during clonal expansion in vivo. (2001) (64)
- Analysis of the Contribution of Individual Substituents in 4,6-Aminoglycoside-Ribosome Interaction (2005) (62)
- Three-center hydrogen bonds in DNA: molecular dynamics of poly(dA).cntdot.poly(dT) (1991) (62)
- Molecular dynamics simulations of solvated yeast tRNA(Asp). (1999) (62)
- The environment of two metal ions surrounding the splice site of a group I intron. (1996) (61)
- Interrelationships between the pseudorotation parameters P and .tau.m and the geometry of the furanose ring (1980) (61)
- Mapping in three dimensions of regions in a catalytic RNA protected from attack by an Fe(II)-EDTA reagent. (1996) (60)
- Determination of thermodynamic parameters for HIV DIS type loop-loop kissing complexes. (2004) (60)
- The complete genome of Blastobotrys (Arxula) adeninivorans LS3 - a yeast of biotechnological interest (2014) (59)
- RNA-Puzzles Round IV: 3D structure predictions of four ribozymes and two aptamers (2020) (58)
- Re-refinement of the B-dodecamer d(CGCGAATTCGCG) with a comparative analysis of the solvent in it and in the Z-hexamer d(5BrCG5BrCG5BrCG). (1987) (58)
- Crystal structure of the bacterial ribosomal decoding site complexed with amikacin containing the γ-amino-α-hydroxybutyryl (haba) group (2006) (58)
- Differential Selectivity of Natural and Synthetic Aminoglycosides towards the Eukaryotic and Prokaryotic Decoding A Sites (2007) (58)
- Effects of Pseudouridylation on tRNA Hydration and Dynamics: a Theoretical Approach (1998) (57)
- Activation of the catalytic core of a group I intron by a remote 3' splice junction. (1992) (57)
- A central pseudoknotted three-way junction imposes tRNA-like mimicry and the orientation of three 5' upstream pseudoknots in the 3' terminus of tobacco mosaic virus RNA. (1996) (57)
- New Structural Insights into Translational Miscoding. (2016) (57)
- Transcriptome-wide identification of A > I RNA editing sites by inosine specific cleavage. (2013) (57)
- Pronounced instability of tandem IU base pairs in RNA. (2004) (56)
- Solution structure of a tRNA with a large variable region: yeast tRNASer. (1989) (56)
- Structure of a folding intermediate reveals the interplay between core and peripheral elements in RNA folding. (2005) (56)
- Evidence for a hydroxide ion bridging two magnesium ions at the active site of the hammerhead ribozyme. (1997) (56)
- Distinctive structures between chimpanzee and human in a brain noncoding RNA. (2008) (56)
- The ribosome prohibits the G•U wobble geometry at the first position of the codon–anticodon helix (2016) (55)
- Molecular dynamics investigations of hammerhead ribozyme RNA (1998) (55)
- A Large-Scale Assessment of Nucleic Acids Binding Site Prediction Programs (2015) (55)
- Classification of pseudo pairs between nucleotide bases and amino acids by analysis of nucleotide–protein complexes (2011) (55)
- Searching genomes for ribozymes and riboswitches (2007) (54)
- RNA structure analysis of human spliceosomes reveals a compact 3D arrangement of snRNAs at the catalytic core (2013) (54)
- Proximity of conserved U6 and U2 snRNA elements to the 5′ splice site region in activated spliceosomes (2006) (54)
- Hydration of oligonucleotides in crystals (1987) (53)
- Solution structure of human U1 snRNA. Derivation of a possible three- dimensional model (1990) (53)
- Anticodon-anticodon interaction induces conformational changes in tRNA: yeast tRNAAsp, a model for tRNA-mRNA recognition. (1986) (53)
- New structural insights into the decoding mechanism: Translation infidelity via a G·U pair with Watson–Crick geometry (2013) (52)
- X-ray-structure of a cytidylyl-3',5'-adenosine-proflavine complex: a self-paired parallel-chain double helical dimer with an intercalated acridine dye. (1980) (52)
- Ribozymes: the first 20 years. (2002) (52)
- Importance of conserved residues for the conformation of the T-loop in tRNAs. (1987) (51)
- Rational drug design and high-throughput techniques for RNA targets. (2000) (51)
- The 16S rRNA binding site of Thermus thermophilus ribosomal protein S15: comparison with Escherichia coli S15, minimum site and structure. (1996) (51)
- Phylogenetic evidence for a new tertiary interaction in bacterial RNase P RNAs. (1997) (51)
- RNA structure: bioinformatic analysis. (2007) (50)
- Dimerization confers increased stability to nucleases in 5′ halves from glycine and glutamic acid tRNAs (2018) (50)
- The Annotation of RNA Motifs (2002) (50)
- RNA solvation: A molecular dynamics simulation perspective (2000) (50)
- Using droplet-based microfluidics to improve the catalytic properties of RNA under multiple-turnover conditions (2015) (50)
- Mutation in a primate-conserved retrotransposon reveals a noncoding RNA as a mediator of infantile encephalopathy (2012) (50)
- Higher order structure of chloroplastic 5S ribosomal RNA from spinach. (1988) (49)
- Crystal structure of the Homo sapiens cytoplasmic ribosomal decoding site complexed with apramycin. (2006) (49)
- Hydrophobic Groups Stabilize the Hydration Shell of 2'-O-Methylated RNA Duplexes. (2001) (48)
- Structure of a Z-DNA with two different backbone chain conformations. Stabilization of the decadeoxyoligonucleotide d(CGTACGTACG) by [Co(NH3)6]3+ binding to the guanine. (1986) (48)
- Molecular dissection of the pseudoknot governing the translational regulation of Escherichia coli ribosomal protein S15. (1995) (48)
- An interactive framework for RNA secondary structure prediction with a dynamical treatment of constraints. (1995) (48)
- Binding of tobramycin leads to conformational changes in yeast tRNAAsp and inhibition of aminoacylation (2002) (48)
- Probing the structure of the regulatory region of human transferrin receptor messenger RNA and its interaction with iron regulatory protein-1. (1997) (48)
- Function of P11, a tertiary base pairing in self-splicing introns of subgroup IA. (1991) (48)
- Crystal structure and fluorescence properties of the iSpinach aptamer in complex with DFHBI (2017) (48)
- The 9/4 secondary structure of eukaryotic selenocysteine tRNA: more pieces of evidence. (1998) (47)
- Protein-dependent transition states for ribonucleoprotein assembly. (2001) (47)
- The RNA Ontology (RNAO): An ontology for integrating RNA sequence and structure data (2009) (47)
- Prediction of nucleic acid binding probability in proteins: a neighboring residue network based score (2015) (47)
- A method for the analysis of puckering disorder in five-membered rings: the relative mobilities of furanose and proline rings and their effects on polynucleotide and polypeptide backbone flexibility (1983) (46)
- Isostericity and tautomerism of base pairs in nucleic acids (2014) (46)
- Architecture and folding mechanism of the Azoarcus Group I Pre-tRNA. (2004) (46)
- The A-minor motifs in the decoding recognition process. (2006) (45)
- Monitoring intermediate folding states of the td group I intron in vivo (2002) (45)
- Hydration of C-H groups in tRNA. (1996) (45)
- Isoalloxazine derivatives promote photocleavage of natural RNAs at G.U base pairs embedded within helices. (1997) (45)
- Water Science Reviews 5: Hydration of nucleic acids (1990) (44)
- The three-dimensional architecture of the class I ligase ribozyme. (2004) (43)
- Architecture of a Diels-Alderase ribozyme with a preformed catalytic pocket. (2004) (43)
- Crystal structures of a group II intron lariat primed for reverse splicing (2016) (43)
- Speciation of a group I intron into a lariat capping ribozyme (2014) (42)
- Group I-like ribozymes with a novel core organization perform obligate sequential hydrolytic cleavages at two processing sites. (1998) (42)
- Toward predicting self-splicing and protein-facilitated splicing of group I introns. (2008) (42)
- The bacterial and mitochondrial ribosomal A-site molecular switches possess different conformational substates (2008) (42)
- The solution structure of the Escherichia coli initiator tRNA and its interactions with initiation factor 2 and the ribosomal 30 S subunit. (1989) (41)
- Structure-Based Design, Synthesis, and A-Site rRNA Cocrystal Complexes of Functionally Novel Aminoglycoside Antibiotics: C2'' Ether Analogues of Paromomycin (2007) (41)
- Crystallographic studies of drug-nucleic acid interactions: proflavine intercalation between the non-complementary base-pairs of cytidilyl-3',5'-adenosine. (1980) (41)
- Mechanism of refolding and reactivation of lactic dehydrogenase from pig heart after dissociation in various solvent media. (1977) (41)
- Hydration of transfer RNA molecules: a crystallographic study. (1988) (40)
- Structure-Activity Relationships among the Kanamycin Aminoglycosides: Role of Ring I Hydroxyl and Amino Groups (2012) (40)
- The Structure of Group I Ribozymes (1996) (40)
- Recognition of Watson-Crick base pairs: constraints and limits due to geometric selection and tautomerism (2014) (40)
- Predicting and modeling RNA architecture. (2011) (40)
- Simulations of the dynamics at an RNA–protein interface (1999) (40)
- The RNA structure alignment ontology. (2009) (39)
- Saccharide–RNA recognition (1998) (38)
- Large telomerase RNA, telomere length heterogeneity and escape from senescence in Candida glabrata (2009) (37)
- The RNA binding site of S8 ribosomal protein of Escherichia coli: Selex and hydroxyl radical probing studies. (1997) (37)
- Loop stereochemistry and dynamics in transfer RNA. (1983) (36)
- Modelling the three-dimensional structure of ribonucleic acids (1993) (36)
- Crystal Structure of the Bacterial Ribosomal Decoding Site Complexed with a Synthetic Doubly Functionalized Paromomycin Derivative: a New Specific Binding Mode to an A‐Minor Motif Enhances in vitro Antibacterial Activity (2007) (36)
- Base pairing constraints drive structural epistasis in ribosomal RNA sequences. (2010) (36)
- RNA Tertiary Structure (2006) (35)
- A surprisingly large RNase P RNA in Candida glabrata. (2005) (35)
- Advances in RNA 3D Structure Modeling Using Experimental Data (2020) (35)
- Bulged residues promote the progression of a loop-loop interaction to a stable and inhibitory antisense-target RNA complex. (2001) (35)
- Structure-based design, synthesis and A-site rRNA co-crystal complexes of novel amphiphilic aminoglycoside antibiotics with new binding modes: a synergistic hydrophobic effect against resistant bacteria. (2010) (35)
- Mining for recurrent long-range interactions in RNA structures reveals embedded hierarchies in network families (2018) (34)
- Modeling RNA tertiary structure from patterns of sequence variation. (2000) (34)
- Four-way junctions in antisense RNA-mRNA complexes involved in plasmid replication control: a common theme? (2001) (34)
- Molecular mimicry in translational control of E. coli threonyl-tRNA synthetase gene. Competitive inhibition in tRNA aminoacylation and operator-repressor recognition switch using tRNA identity rules. (1992) (33)
- Proton magnetic resonance studies of 2'-,3'-, and 5'-deoxyadenosine conformations in solution. (1977) (33)
- RNAs mediating cotranslational insertion of selenocysteine in eukaryotic selenoproteins. (1996) (33)
- RNA-Puzzles toolkit: a computational resource of RNA 3D structure benchmark datasets, structure manipulation, and evaluation tools (2019) (33)
- MAO: a Multiple Alignment Ontology for nucleic acid and protein sequences (2005) (32)
- The modular structure of Escherichia coli threonyl‐tRNA synthetase as both an enzyme and a regulator of gene expression (2003) (32)
- Structure and electronic properties of DNA. (1978) (31)
- Structural Water Bridges in Nucleic Acids (1993) (31)
- A sulfate pocket formed by three GoU pairs in the 0.97 A resolution X-ray structure of a nonameric RNA. (1999) (31)
- Melting of the solvent structure around a RNA duplex: a molecular dynamics simulation study. (2002) (31)
- 2,6-Diaminopurine as a highly potent corrector of UGA nonsense mutations (2020) (31)
- Electron spin resonance of irradiated single crystals of uracil (1976) (29)
- The RNA structurome: high-throughput probing (2010) (29)
- The Mg 2 Binding Sites of the 5 S rRNA Loop E Motif as (2003) (29)
- Molecular dynamics simulations of poly(dA)·poly(dT): Comparisons between implicit and explicit solvent representations (1993) (29)
- Light‐induced displacement of hydrogen in pyrimidine H‐addition radicals (1976) (28)
- Inhibition of Aminoglycoside‐Deactivating Enzymes APH(3′)‐IIIa and AAC(6′)‐Ii by Amphiphilic Paromomycin O2′′‐Ether Analogues (2011) (28)
- Solvent distribution in crystals of B- and Z-oligomers. (1985) (28)
- The structure of yeast tRNA(Asp). A model for tRNA interacting with messenger RNA. (1985) (28)
- Influence of specific mutations on the thermal stability of the td group I intron in vitro and on its splicing efficiency in vivo: a comparative study. (1999) (28)
- A dynamic correlation between ribose conformation and glycosyl torsion angle of dissolved xanthosine studies by continuous-wave-mode and pulsed nuclear-magnetic-resonance methods. (1974) (28)
- Molecular modelling of the GIR1 branching ribozyme gives new insight into evolution of structurally related ribozymes (2008) (28)
- Ribose Conformations in the Common Purine(ß)ribosides, in Some Antibiotic Nucleosides, and in Some Isopropylidene Derivatives: A Comparison (1975) (27)
- Involvement of "hinge" nucleotides of Xenopus laevis 5 S rRNA in the RNA structural organization and in the binding of transcription factor TFIIIA. (1991) (27)
- A pseudoknot is required for efficient translational initiation and regulation of the Escherichia coli rpsO gene coding for ribosomal protein S15. (1995) (26)
- Translation of non-standard codon nucleotides reveals minimal requirements for codon-anticodon interactions (2018) (26)
- Phylogenetic analysis of tmRNA genes within a bacterial subgroup reveals a specific structural signature. (2001) (26)
- Investigations on the dynamic structures of adenine- and thymine-containing DNA. (1992) (26)
- Motif prediction in ribosomal RNAs Lessons and prospects for automated motif prediction in homologous RNA molecules. (2002) (26)
- Host-guest molecular interactions: from chemistry to biology (1991) (26)
- Analysis of the cooperative thermal unfolding of the td intron of bacteriophage T4. (1999) (25)
- Automatic display of RNA secondary structures (1993) (25)
- Nucleic acids. From self-assembly to induced-fit recognition. (1997) (25)
- Twenty years of RNA crystallography (2015) (25)
- Brownian-dynamics simulations of metal-ion binding to four-way junctions. (2002) (25)
- Kinetic analysis of the reactivation of rabbit muscle aldolase after denaturation with guanidine·HCl (1977) (24)
- Temperature-dependent molecular dynamics and restrained X-ray refinement simulations of a Z-DNA hexamer. (1986) (24)
- Loop-loop interactions involved in antisense regulation are processed by the endoribonuclease III in Staphylococcus aureus (2012) (24)
- Radical formation in salts of pyrimidines. I. 1-methyluracil. HBr crystals. (1975) (24)
- Radical formation in salts of pyrimidines. II. Cytosine. HCl crystals. (1975) (23)
- Automated prediction of three-way junction topological families in RNA secondary structures (2012) (23)
- Effects of Vaccine Strain Mutations in Domain V of the Internal Ribosome Entry Segment Compared in the Wild Type Poliovirus Type 1 Context* (2004) (23)
- Role of conserved nucleotides in building the 16S rRNA binding site of E. coli ribosomal protein S8. (1994) (23)
- Riboswitch structures: purine ligands replace tertiary contacts. (2005) (23)
- The multiple flavors of GoU pairs in RNA (2019) (23)
- Tautomeric G•U pairs within the molecular ribosomal grip and fidelity of decoding in bacteria (2018) (22)
- A tale in molecular recognition: the hammerhead ribozyme (2007) (22)
- Formation of H-addition radicals in some pyrimidine and purine derivatives (1977) (22)
- The amazing world of bacterial structured RNAs (2010) (21)
- Mutant MRPS5 affects mitoribosomal accuracy and confers stress‐related behavioral alterations (2018) (21)
- A novel double kink-turn module in euryarchaeal RNase P RNAs (2017) (21)
- Evolution of RNA Architecture (2004) (20)
- Ribosomal 5S RNA from Xenopus laevis oocytes: conformation and interaction with transcription factor IIIA. (1990) (20)
- Electron Spin Resonance of Free Radicals and Radical Pairs in Irradiated Single Crystal of 1-Methyluracil (1973) (19)
- Molecular Dynamics: Simulations of Nucleic Acids (2002) (19)
- Modified nucleotides of tRNAPro restrict interactions in the binary primer/template complex of M-MuLV. (1998) (19)
- Effect of mutations in domain 2 on the structural organization of oocyte 5 S rRNA from Xenopus laevis. (1990) (18)
- Evaluation of uranyl photocleavage as a probe to monitor ion binding and flexibility in RNAs. (2000) (18)
- Base pairs and pseudo pairs observed in RNA–ligand complexes (2009) (18)
- The initiation accuracy of the SV40 early transcription is determined by the functional domains of two TATA elements. (1992) (17)
- Crystal structure of the bacterial ribosomal decoding site complexed with amikacin containing the gamma-amino-alpha-hydroxybutyryl (haba) group. (2006) (17)
- Minimization and molecular dynamics studies of guanosine and Z‐DNA modified by N‐2‐acetylaminofluorene (1991) (17)
- Comparative patterns of modified nucleotides in individual tRNA species from a mesophilic and two thermophilic archaea (2020) (17)
- High-resolution silkworm pan-genome provides genetic insights into artificial selection and ecological adaptation (2022) (17)
- Self-assembled RNA nanostructures (2014) (16)
- Solution conformational analysis of 2'-amino-2''deoxyadenosine, 3'-amino-3'-deoxyadenosine and puromycin by pulsed nuclear-magnetic-resonance methods. (1977) (16)
- TOWARDS COORDINATED INTERNATIONAL SUPPORT OF CORE DATA RESOURCES FOR THE LIFE SCIENCES (2017) (16)
- Context dependent RNA-RNA recognition in a three-dimensional model of the 16S rRNA core. (1997) (16)
- Ribosomal mistranslation leads to silencing of the unfolded protein response and increased mitochondrial biogenesis (2019) (16)
- ESR and INDO study of radical conformations in irradiated single crystals of L‐histidine free base (1974) (16)
- Formation of H -Addition Radicals in Adenine Derivatives (1976) (15)
- Structural studies on site-directed mutants of domain 3 of Xenopus laevis oocyte 5 S ribosomal RNA. (1991) (15)
- How to fold and protect mitochondrial ribosomal RNA with fewer guanines (2018) (14)
- Structure of radicals from nucleic acid constituents. (1978) (14)
- Conformation of the common purine (β) ribosides in solution: further evidence for a correlation between N-S state of the ribose moiety and syn-anti equilibrium (1975) (14)
- Westhof's rule (1992) (14)
- Non-canonical substrates of aminoacyl-tRNA synthetases: the tRNA-like structure of brome mosaic virus genomic RNA. (1993) (14)
- INDO analysis of the imidazole anion and hydrogen addition radicals (1975) (14)
- Mapping post-transcriptional modifications in Staphylococcus aureus tRNAs by nanoLC/MSMS. (2019) (14)
- Transfer RNA Structure (2012) (13)
- E.S.R. and INDO study of radicals produced in irradiated single crystals of histidine hydrochloride monohydrate at low temperature (1974) (13)
- Chemical Diversity in RNA Cleavage (1999) (13)
- Current opinion in structural biology (1992) (13)
- Specific features of telomerase RNA from Hansenula polymorpha (2013) (13)
- Visualizing the Logic Behind RNA Self-Assembly (1996) (12)
- The Action of Ionizing Radiation on Protein: II. Radical Formation in L-Tryptophan·HCl (1978) (12)
- Ribosomal mistranslation leads to silencing of the unfolded protein response and increased mitochondrial biogenesis (2019) (12)
- 23 A Modular and Hierarchical Approach for All-Atom RNA Modeling (2006) (12)
- An RNA-centric historical narrative around the Protein Data Bank (2021) (12)
- Nonintercalative binding of proflavin to Z-DNA: structure of a complex between d(5BrC-G-5BrC-G) and proflavin. (1988) (12)
- Radical formation in single crystals of hypoxanthine.HCl.H2O, inosine, and the disodium salt of 5'-inosine-monophosphate. (1978) (12)
- Function of a pseudoknot in the suppression of an alternative splicing event in a group I intron. (1996) (11)
- Formation of H Adduct Radicals in Cytosine and Its Derivatives (1973) (11)
- A structural module in RNase P expands the variety of RNA kinks (2012) (11)
- RBscore&NBench: a high-level web server for nucleic acid binding residues prediction with a large-scale benchmarking database (2016) (11)
- Radicals in irradiated monocrystals of the base-pair complex 9-ethyl adenine: 1-methyl uracil. (1974) (10)
- Structural Comparisons Between Prokaryotic and Eukaryotic Ribosomal Decoding A Sites Free and Complexed with Aminoglycosides (2007) (10)
- Studies on anticodon-anticodon interactions: hemi-protonation of cytosines induces self-pairing through the GCC anticodon of E. coli tRNA-Gly. (1986) (10)
- The Different Role of High-Affinity and Low-Affinity Metal Ions in Cleavage by a Tertiary Stabilized Cis Hammerhead Ribozyme from Tobacco Ringspot Virus (2008) (10)
- The nature of the purine at position 34 in tRNAs of 4-codon boxes is correlated with nucleotides at positions 32 and 38 to maintain decoding fidelity (2020) (10)
- Mutagenesis of 16 S rRNA C 1409-G 1491 Base-pair Differentiates Between 6 0 OH and 6 0 NH 3 C Aminoglycosides (2005) (10)
- Transfer RNA identity rules and conformation of the tyrosine tRNA-like domain of BMV RNA imply additional charging by histidine and valine. (1998) (10)
- Formation of H-Addition Radicals in Adenine Derivatives: Part II (1977) (10)
- RNase P: at last, the key finds its lock. (2011) (10)
- Temperature-Dependent Resonance between Electronic Exchange and Zeeman Energies in ESR Spectra of Paired Radicals (1975) (10)
- Crystal structure of yeast tRNAAsp: atomic coordinates. (1985) (10)
- Structure of an A-form RNA duplex obtained by degradation of 6S RNA in a crystallization droplet. (2013) (9)
- Identification and annotation of noncoding RNAs in Saccharomycotina. (2011) (9)
- Structural biology. Evolution of RNA architecture. (2004) (9)
- Pseudouridines or how to draw on weak energy differences. (2019) (9)
- Molecular adaptation in RNA complexes. (2009) (9)
- Rapid calculation of any dielectric function for molecular dynamics simulations of biological macromolecules (1992) (9)
- Structure-based design, synthesis, and A-site rRNA cocrystal complexes of functionally novel aminoglycoside antibiotics: C2" ether analogues of paromomycin. (2007) (9)
- in the 5 S rRNA Loop E Inferred from Molecular Dynamics Simulations (2004) (8)
- The action of ionizing radiation on protein. III. Radical formation in L-phenylalanine.HCl. (1978) (8)
- S2S‐Assemble2: a Semi‐Automatic Bioinformatics Framework to Study and Model RNA 3D Architectures (2014) (8)
- From RNAi to Epigenomes: How RNA Rules The World (2005) (8)
- Search of essential parameters for the aminoacylation of viral tRNA-like molecules. Comparison with canonical transfer RNAs. (1990) (8)
- Leadzyme RNA catalysis (1999) (7)
- Group I introns and RNA folding. (2001) (7)
- Evaluation of the stereochemical quality of predicted RNA 3D models in the RNA-Puzzles submissions (2021) (7)
- Recurrent RNA Motifs (1999) (7)
- Structural motifs of the nucleotidyl unit and the handedness of polynucleotide helices (1981) (7)
- MO Calculations of Some Thymine Radicals at the INDO Level (1976) (7)
- Electron spin resonance study of radiation-produced radical pairs in single crystals of 1-methyluracil (1975) (7)
- Handbook of RNA Biochemistry: Second, Completely Revised and Enlarged Edition (2014) (7)
- Modeling the Architecture of Structured RNAs within a Modular and Hierarchical Framework (2008) (7)
- Structural and Dynamical Characterization of Nucleic Acid Water and Ion Binding Sites (2002) (7)
- Ribozyme Architectural Diversity Made Visible (1998) (7)
- Ribose Conformations of 8-Azapurine Nucleosides in Solution (1976) (6)
- The conformation of the initiator tRNA and of the 16S rRNA from Escherichia coli during the formation of the 30S initiation complex. (1990) (6)
- Bacterial translation machinery for deliberate mistranslation of the genetic code (2021) (6)
- Ribozymes, catalytically active RNA molecules. Introduction. (2012) (6)
- Unusual tertiary pairs in eukaryotic tRNAAla (2020) (6)
- Nanostructures and nanoconstructions based on DNA (2015) (6)
- Covalent binding of a carcinogen as a probe for the dynamics of deoxyribonucleic acid. (1985) (6)
- Visualization of energetics and conformations from molecular computer simulations (1986) (6)
- The action of ionizing radiation on protein: radical formation in L-histidine crystals. (1975) (6)
- RNA Structure: Pseudoknots (2012) (6)
- Folding and Self-Assembly of Biological Macromolecules (2004) (6)
- E.s.r.-spectroscopy of radiation-produced radicals in 9-ethyl adenine. (1974) (6)
- Usefulness of functional and structural solution data for the modeling of tRNA-like structures. (1996) (6)
- Letter: E.s.r. of irradiated single crystals of cytosine. (1973) (5)
- Conformations of 3-Deazaadenosine, 3-Deaza-8-azaadenosine, and Benzimidazole-1-β-ᴅ-riboside in Solution: HRNMR-, Proton-Relaxation-Time-, and Nuclear-Overhauser- Effect Studies (1978) (5)
- Structural Water of Nucleic Acids (1990) (5)
- Practical Statistics for Experimental Biologists — 2nd edition by A.C. Wardlaw. John Wiley & Sons, Chichester, 1999. ISBN-0471988227; £18.99 (2000) (5)
- The protonation of the 5-thymyl radical in single crystals of thymine derivatives: e.s.r. and INDO evidence. (1979) (5)
- Milestones in Molecular Dynamics Simulations of RNA Systems (2008) (5)
- The unforeseeable hammerhead ribozyme (2009) (5)
- Conformations of the Nucleoside Analogs Formycin, 2-Azaadenosine, and Nebularine in Solution (1977) (5)
- Crystallographic studies of Homo sapiens ribosomal decoding A site complexed with aminoglycosides. (2005) (5)
- The ribosomal decoding site and antibiotics. (2006) (4)
- Roleofconserved nucleotides inbuilding the16SrRNA binding site ofE.coli ribosomal protein S8 (1994) (4)
- The endless subtleties of RNA-protein complexes. (2011) (4)
- Correlated sequence signatures are present within the genomic 5′UTR RNA and NSP1 protein in coronaviruses (2022) (4)
- Solution Conformations of Purine(ß)Nucleosides and Analogs (1978) (4)
- Solution Conformation of tRNAs: Correlation with Crystal Structures (1983) (4)
- Structure of a 1:2 sandwich complex of proflavine and adenosine with an unusual puckering disorder and a site shared by sulfate and water molecules (1982) (4)
- Detection of an OH-addition radical and its possible decay product in single crystals of cytosine monohydrate. (1977) (4)
- The Versatile Transfer RNA Molecule: Crystallography of Yeast tRNAAsp (1983) (3)
- Radical formation in salts of pyrimidines III. Cytosine . H2O cyrstals. (1976) (3)
- Mitochondrial Aminoacyl-tRNA Synthetases in Human Disease (2017) (3)
- X-ray crystal structures of antibiotic-RNA complexes (2002) (3)
- Temperature-dependent long-range proton hyperfine coupling in pyrimidine H-addition radicals trapped in single crystals (1977) (3)
- Correlated motions in DNA. (1980) (3)
- Polymorphism and possible biological functions of parallel-stranded DNA (1992) (3)
- High-resolution Cryo-EM Structure of the Trypanosoma brucei Ribosome: A Case Study (2014) (3)
- Ribozymes: The First 20 Years: The First 20 Years (2002) (3)
- The Architectural Motifs of Folded RNAs (2010) (3)
- The “rigid” nucleotide concept in perspective (2009) (3)
- Refinement of protein and nucleic acid structures. (1996) (3)
- How to silence silencing. (2004) (3)
- Crystal structure of the Homo sapiens cytoplasmic ribosomal decoding A site (2006) (2)
- Aminoglycoside Antibiotics: Structural Decoding of Inhibitors Targeting the Ribosomal Decoding A Site (2013) (2)
- Modeling RNA Molecules (2012) (2)
- GU Base Pairs and Variable Loop in Yeast tRNAAsp (1986) (2)
- RNA Tectonics and Modular Modeling of RNA (1997) (2)
- Toward atomic accuracy in RNA design (2010) (2)
- Over a Decade of Bacterial Ribonuclease P Modeling (2010) (2)
- Proflavine binding to poly(rC-rA) inverts the CD spectrum but not the helix handedness. (1984) (2)
- Perspectives and Pitfalls in Nucleic Acids Crystallography. (2016) (2)
- Molecular recognition between the ribosomal decoding site and natural or non-natural aminoglycosides. (2005) (2)
- Appendix: UV Spectroscopy for the Quantitation of RNA (2005) (2)
- Molecular dynamics simulations of DNA oligomers under various electrostatic parameters (1991) (2)
- Reference genomes of 545 silkworms enable high-throughput exploring genotype-phenotype relationships (2021) (2)
- Structure of Xenopus Laevis 5S rRNA as Determined by Solution Data and Computer Graphic Modeling (1990) (2)
- RNA modeling, naturally (2012) (2)
- RNA pseudoknots (1992) (2)
- Détermination assistée par ordinateur de structures secondaires d'ARN (1995) (1)
- 33 High-resolution cryo-EM structure of the Trypanosoma brucei 80S: a unique eukaryotic ribosome (2013) (1)
- RNA structure from deep sequencing (2015) (1)
- Structure prediction of the druggable fragments in SARS-CoV-2 untranslated regions (2021) (1)
- 2,6-Diaminopurine as a highly potent corrector of UGA nonsense mutations (2020) (1)
- Unique secondary and tertiary structural features of the eucaryotic selenocysteine 8 (2005) (1)
- A 3-Dimensional model for the hammerhead ribozyme from fluorescence resonance energy transfer measurements (1995) (1)
- Slippery substrates (1994) (1)
- New dimensions of RNA in molecular recognition and catalysis. (2011) (1)
- The Solution Structure of Spinach Chloroplast and of Xenopus Laevis Oocyte 5S rRNAs (1991) (1)
- Neocles B. Leontis (1955 - 2020). (2021) (1)
- The determination of the secondary structures of ribonucleic acids as a constraint satisfaction problem (1994) (1)
- RNA Structure : Advances and Assessment of 3 D Structure Prediction Zhichao Miao and Eric Westhof (2017) (1)
- Computational Pipeline for Reference-Free Comparative Analysis of RNA 3D Structures Applied to SARS-CoV-2 UTR Models (2022) (1)
- Muttaiya Sundaralingam (1931-2004): A Pioneering Stereochemist and Crystallographer of Nucleic Acids (2005) (1)
- Nucleic acids: Diversity, folding, and stability of nucleic acid structures (1995) (1)
- X-Ray analyses of non-coding DNA/RNAs that function as molecular switches (2008) (1)
- Inside Cover: Inhibition of Aminoglycoside‐Deactivating Enzymes APH(3′)‐IIIa and AAC(6′)‐Ii by Amphiphilic Paromomycin O2′′‐Ether Analogues (ChemMedChem 11/2011) (2011) (1)
- INDO MO Calculations of the Hydrogen Abstraction Radical Formed by Bombardment of Thymine and Derivatives with Excited Inert Gases (1974) (1)
- Modeling tertiary structure of RNA (2005) (1)
- The Use of Molecular Dynamics Simulations for Modelling Nucleic Acids (2007) (1)
- Graph Algorithms and Software Framework for Interactive RNA Structure Modelling (2012) (1)
- Crystal Structure of the Homo sapiens Cytoplasmic Ribosomal Decoding Site in presence of paromomycin (2007) (1)
- Comparative genomics of emerging pathogens in the Candida glabrata clade (2013) (1)
- PMR study of N6 ,N6‐dimethyladenosine conformations under high pressure (1977) (1)
- Photosensitized induction of H-addition radicals in frozen aqueous solutions of cytosine and uracil derivatives. (1977) (1)
- High-resolution cryo-EM structure of Trypanosoma brucei 80 S : A unique eukaryotic ribosome (2012) (1)
- cryo-electron microscopy structure of the Trypanosoma brucei 80S ribosome (2013) (1)
- Course 2 Introduction to non-watson-crick base pairs and RNA folding (2005) (1)
- bioch of an aminoglycoside / A-site RNA complex : conformational and hydration patterns (2006) (1)
- Faculty Opinions recommendation of Genetic control by a metabolite binding mRNA. (2002) (0)
- Faculty Opinions recommendation of Structural basis of HutP-mediated anti-termination and roles of the Mg2+ ion and L-histidine ligand. (2005) (0)
- Catalytic RNA (2001) (0)
- Correlation Between Crystal and Solution Structures in tRNA. Yeast tRNAPhe and tRNAAsp the Models for Free and Messenger RNA Bound tRNAs (1986) (0)
- Faculty of 1000 evaluation for Active site tightness and substrate fit in DNA replication. (2014) (0)
- Crystal Structure of the Homo sapiens Cytoplasmic Ribosomal Decoding Site complexed with paromamine derivative NB33 (2007) (0)
- Interacting with the Translating Ribosome Structure of Monomeric Yeast and Mammalian Sec 61 Complexes (2013) (0)
- Complex Between Paromomycin Derivative JS5-39 and the 16S-Rrna A-Site. (2005) (0)
- Faculty Opinions recommendation of Gentamicin fails to increase dystrophin expression in dystrophin-deficient muscle. (2003) (0)
- Nucleic acids RNA: from architecture to recognition and catalysis (2005) (0)
- Faculty Opinions recommendation of Reconsidering the evolution of eukaryotic selenoproteins: a novel nonmammalian family with scattered phylogenetic distribution. (2004) (0)
- Faculty Opinions recommendation of Structure and function of an RNase H domain at the heart of the spliceosome. (2008) (0)
- Faculty Opinions recommendation of Molecular basis of tRNA recognition by the Elongator complex. (2019) (0)
- Crystal structures of the bacterial ribosomal decoding site complexed with amikacin. (2006) (0)
- Folding and self-assembly of biological macromolecules : proceedings of the Deuxièmes Entretiens de Bures (2004) (0)
- Cryo-EM structure of idle yeast Ssh1 complex bound to the yeast 80S ribosome (2009) (0)
- Crystal structures of the bacterial, mitochondrial and cytoplasmic A-site molecular switches (2008) (0)
- Faculty Opinions recommendation of Crystal structure of the transfer-RNA domain of transfer-messenger RNA in complex with SmpB. (2003) (0)
- Speciation of a group I intron into a lariat capping ribozyme (Heavy atom derivative) (2014) (0)
- Faculty Opinions recommendation of Molecular recognition by glycoside pseudo base pairs and triples in an apramycin-RNA complex. (2005) (0)
- Crystal Structure of the Homo sapiens Mitochondrial Ribosomal Decoding Site (A1555G mutant, Br-derivative) (2008) (0)
- Model of the small subunit RNA based on a 5.5 A cryo-EM map of Triticum aestivum translating 80S ribosome (2014) (0)
- I Hydroxyl and Amino Groups Kanamycin Aminoglycosides: Role of Ring Structure-Activity Relationships among the (2014) (0)
- Faculty Opinions recommendation of Capreomycin binds across the ribosomal subunit interface using tlyA-encoded 2'-O-methylations in 16S and 23S rRNAs. (2006) (0)
- Atomic Glimpses on a Billion-Year-Old Molecular Machine (2000) (0)
- Marszalkowski-1-Comparative study on tertiary contacts and folding of RNase P RNAs from a 1 psychrophilic , a mesophilic / radiation-resistant and a thermophilic bacterium 2 3 (2021) (0)
- Complex Between Ribostamycin and the 16S-RRNA A-Site (2005) (0)
- [The atomic structure of the ribosome into the spotlight]. (2009) (0)
- Crystal structure of the bacterial ribosomal decoding A site in the presence of [Co(NH3)6]Cl3 (2008) (0)
- Complex Between Gentamicin C1A and the 16S-RRNA A-Site (2005) (0)
- Isostericity matrices A tool for comparative sequence analysis (2002) (0)
- PMR STUDY OF iV6,N6-DIMETHYLADENOSINE CONFORMATIONS UNDER HIGH PRESSURE (2001) (0)
- Crystallographic approaches to nucleic acid structure and dynamics (1986) (0)
- Switchable RNA Motifs As Drug Targets (2006) (0)
- Identification of Up47 in three thermophilic archaea, one mesophilic archaeon, and one hyperthermophilic bacterium (2023) (0)
- Complex between Paromomycin and the 16S-rRNA A-site at 2.5 A resolution (2002) (0)
- Faculty Opinions recommendation of Rapid peptide bond formation on isolated 50S ribosomal subunits. (2006) (0)
- The tRNAAsp-Aspartyl-tRNA Synthetase System from Yeast: Structural and Functional Studies (1985) (0)
- Web Site: RNA falten (2001) (0)
- Faculty Opinions recommendation of Thermodynamics of aminoglycoside-rRNA recognition: the binding of neomycin-class aminoglycosides to the A site of 16S rRNA. (2002) (0)
- Panel 12: Department of Organismal Biology, Ecology and Genetics, Department of Department of Cell and Molecular Biology (2017) (0)
- The Predictions of RNA binding probabilities in nucleic acids binding proteins (2015) (0)
- Unique base pairing interactions at the third position of codon-anticodon helix (2016) (0)
- Faculty Opinions recommendation of Structural basis for overhang-specific small interfering RNA recognition by the PAZ domain. (2004) (0)
- Cover Picture: Differential Selectivity of Natural and Synthetic Aminoglycosides towards the Eukaryotic and Prokaryotic Decoding A Sites (ChemBioChem 14/2007) (2007) (0)
- Crystal Structure of the Homo sapiens Mitochondrial Ribosomal Decoding Site (Br-derivative) (2008) (0)
- CONFIGURATION OF WOBBLE PAIRS WITH PURINE-TYPE BASES AS ANTICODON WOBBLE BASES: SIGNIFICANCE FOR THE GENETIC CODE IV.1 Introduction (2012) (0)
- Anionic G•U pairs in bacterial ribosomal rRNAs. (2023) (0)
- CRYSTALLOGRAPHY OF BIOLOGICAL MACROMOLECULES C219 (2005) (0)
- Complex between Lividomycin A and the 16S-Rrna A Site (2005) (0)
- Crystal structure of the bacterial ribosomal decoding site complexed with an amphiphilic paromomycin O2''-ether analogue (2011) (0)
- Nucleic acids: how high resolution structural biology help us to understand Darwinian evolution. (2009) (0)
- Crystal Structure of the Homo sapiens Mitochondrial Ribosomal Decoding Site in the presence of nonspecifically bound paromomycin (A1555G mutant, Br-derivative) (2008) (0)
- Molecular Dynamics Simulations of DNA Oligomers (2008) (0)
- Crystal structure of the bacterial ribosomal decoding site complexed with aminoglycoside containing the L-HABA group (2007) (0)
- NINETY YEARS and a lot more to come (2004) (0)
- Milestones in RNA molecular dynamics simulations (2008) (0)
- Isostericity, tautomerism and geometric selection of nucleic acid base pairs (2014) (0)
- Faculty Opinions recommendation of Natural amino acids do not require their native tRNAs for efficient selection by the ribosome. (2009) (0)
- A molecular model for codon–anticodon recognition: the crystal structure of yeast tRNAAsp (1984) (0)
- RNA Ligase, class I (2004) (0)
- Localization of the large subunit ribosomal proteins into a 6.1 A cryo-EM map of Saccharomyces cerevisiae translating 80S ribosome (2010) (0)
- LIGHT-INDUCED DISPLACEMENT OF HYDROGEN IN PYRIMIDINE H-ADDITION RADICALS (1976) (0)
- A sulfate pocket formed by three GoU pairs in the structure of a nonameric RNA (1999) (0)
- Chimeric sTRSV+ hammerhead ribozyme (2003) (0)
- PL.LSU/2 GROUPII INTRON (2001) (0)
- Fidelity of translation: structural view (2015) (0)
- Structure of the hammerhead ribozyme from fluorescence resonance energy transfer measurements (1994) (0)
- Data, data, burning deep, in the forests of the net. (2022) (0)
- Crystal Structures of a Group II Intron Lariat and Implications for the Spliceosome (2018) (0)
- Faculty Opinions recommendation of Spectroscopic observation of RNA chaperone activities of Hfq in post-transcriptional regulation by a small non-coding RNA. (2007) (0)
- Symposia lectures (2007) (0)
- Structure of the lariat form of a chimeric derivative of the Oceanobacillus iheyensis group II intron in the presence of NH4+, MG2+ and an inactive 5' exon. (2016) (0)
- Web Site: How to fold RNA (2001) (0)
- Hydrogen bonding in RNA systems viewed by molecular dynamics simulations (2002) (0)
- Faculty Opinions recommendation of Comparative analysis of ribosomal proteins in complete genomes: an example of reductive evolution at the domain scale. (2003) (0)
- Structure of the lariat form of a chimeric derivative of the Oceanobacillus iheyensis group II intron in the presence of NH4+ and MG2+. (2016) (0)
- Complex between Kanamycin A and the 16S-Rrna A Site. (2005) (0)
- Faculty Opinions recommendation of Wobble base-pairing slows in vivo translation elongation in metazoans. (2014) (0)
- Sarcin Ricin Loop, mutant C2666A U2653G C2667A (2021) (0)
- Faculty Opinions recommendation of An unexpected type of ribosomes induced by kasugamycin: a look into ancestral times of protein synthesis? (2009) (0)
- structure prediction : A CASP-like evaluation of RNA three-dimensional RNA-Puzzles (2012) (0)
- Crystal Structure of the Homo sapiens Mitochondrial Ribosomal Decoding Site (2008) (0)
- Crystal Structure of Tobramycin Bound to the Eubacterial 16S rRNA A Site (2003) (0)
- Sarcin Ricin Loop, mutant C2666U (2021) (0)
- Modelling the architecture of large RNA molecules: a three-dimensional model for group I ribozymes (1992) (0)
- STRUCTURE OF 5'-D(*(BRO)CP*GP*(BRO)CP*G)-3' IN COMPLEX WITH PROFLAVINE (2011) (0)
- Characterisation of novel, genomically encoded Hammerhead Ribozymes (2005) (0)
- The annotations of non-Watson–Crick base pairs and comparisons between RNA structures and sequences (2008) (0)
- Editorial overview: Protein nucleic acid interactions: order, ambiguities and disorder in recognition and complex formation between proteins and nucleic acids. (2018) (0)
- Solution structure ofhumanUlsnRNA.Derivation ofa possible three-dimensional model (1990) (0)
- Model of the small subunit RNA based on a 6.1 A cryo-EM map of Saccharomyces cerevisiae translating 80S ribosome (2010) (0)
- The 2,6-diaminopurine as a highly potent corrector of UGA nonsense mutations in cancers and other genetic diseases (2020) (0)
- Importance of potassium ions for ribosome structure and function revealed by long-wavelength X-ray diffraction (2019) (0)
- Translation of non-standard codon nucleotides reveals minimal requirements for codon-anticodon interactions (2018) (0)
- M O Calculations of Some Thymine Radicals at the IN D O Level (2013) (0)
- Cryo-EM structure of the active yeast Ssh1 complex bound to the yeast 80S ribosome (2009) (0)
- On the Role of Single-Stranded Adenines in RNA-RNA Recognition (1995) (0)
- Crystallographic Studies of Complexes between the Ribosomal Decoding Site and Aminoglycosides Antibiotics. (2005) (0)
- Speciation of a group I intron into a lariat capping ribozyme (Circularly permutated ribozyme) (2014) (0)
- Theinitiation accuracyoftheSV40early transcription is determined bythefunctional domains oftwoTATA elements (1992) (0)
- Crystallographic studies of Homo sapiens A-sites complexed with aminoglycosides (2005) (0)
- INDO study of bent radical anions (1975) (0)
- 5(th) EBSA & 15(th) IUPAB International Biophysics Congress Montpellier (France), August 27(th)-September 1(st), 2005 (2005) (0)
- Model of the large subunit RNA based on a 6.1 A cryo-EM map of Saccharomyces cerevisiae translating 80S ribosome (with ES27L-in conformation) (2010) (0)
- Crystal Structure of the Homo sapiens Mitochondrial Ribosomal Decoding Site in the Presence of [Co(NH3)6]Cl3 (A1555G mutant, Br-derivative) (2008) (0)
- Local Flexibility in Recognition Processes Between Macromolecules (1987) (0)
- Lariat-capping ribozyme (circular permutation form) (2018) (0)
- Faculty Opinions recommendation of Visualizing tmRNA entry into a stalled ribosome. (2003) (0)
- RNA Structure and Folding, edited by Dagmar Klostermeier and Christian Hammann. 2013. De Gruyter, Berlin/Boston. (2014) (0)
- Photoproducts Derived from 9-Substituted Dibenzobarrelenes (1997) (0)
- ESR AND INDO STUDY OF RADICAL CONFORMATIONS IN IRRADIATED SINGLE CRYSTALS OF L-HISTIDINE FREE BASE (1975) (0)
- NMR VALIDATED MODEL OF DOMAIN IIID OF HEPATITIS C VIRUS INTERNAL RIBOSOME ENTRY SITE (2001) (0)
- Crystal Structure of the Prokaryotic Ribosomal Decoding Site Complexed with Paromamine Derivative NB30 (2007) (0)
- Nucleic acids on folded architectures, molecular recognition and catalysis (1999) (0)
- Crystal structure of an A-form RNA duplex containing three GU base pairs (2013) (0)
- Eukaryotic tRNA sequences present conserved and amino acid-specific structural signatures (2022) (0)
- Crystal structures of Homo sapiens cytoplasmic A site with and without the antibiotic apramycin (2006) (0)
- RNA APTAMER COMPLEXED WITH ARGININE, NMR (1996) (0)
- RNA Structure Prediction (2002) (0)
- Crystal Structure of the Homo sapiens Cytoplasmic Ribosomal Decoding Site in Presence of Paromamine Derivative NB30 (2007) (0)
- Assessment of three-dimensional RNA structure prediction in CASP15 (2023) (0)
- Local Flexibility in Recognition Processes Between (1987) (0)
- RNA APTAMER COMPLEXED WITH CITRULLINE, NMR (1996) (0)
- RNA-mediated gene regulation and catalysis: Nucleic acids (2007) (0)
- Faculty Opinions recommendation of Egalitarian is a selective RNA-binding protein linking mRNA localization signals to the dynein motor. (2009) (0)
- Crystal Structure of the Homo sapiens Mitochondrial Ribosomal Decoding Site (A1555G Mutant) (2008) (0)
- Faculty Opinions recommendation of Antizyme frameshifting as a functional probe of eukaryotic translational termination. (2003) (0)
- Chapter 9 . Visualizing RNA sequence and structure Contributors (2011) (0)
- Brief considerations on targeting RNA with small molecules (2022) (0)
- 3P-233 Identification of co-variation between RNA and protein in a kink-turn RNP motif(Bioinformatics:Molecular evolution,The 47th Annual Meeting of the Biophysical Society of Japan) (2009) (0)
- Comparative study on tertiary contacts and folding of RNase P RNAs from a psychrophilic, a mesophilic/radiation-resistant, and a thermophilic bacterium (2021) (0)
- Faculty Opinions recommendation of RNA helical packing in solution: NMR structure of a 30 kDa GAAA tetraloop-receptor complex. (2005) (0)
- Faculty Opinions recommendation of The accuracy of aminoacylation--ensuring the fidelity of the genetic code. (2014) (0)
- CRYO-EM STRUCTURE OF THE MAMMALIAN SEC61 COMPLEX BOUND TO THE ACTIVELY TRANSLATING WHEAT GERM 80S RIBOSOME (2009) (0)
- ReviewRibozymes : The First 20 Years a hairpin ribozyme in complex with a vanadate transition (2002) (0)
- Faculty Opinions recommendation of Structural insights into ligand recognition by a sensing domain of the cooperative glycine riboswitch. (2011) (0)
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