Gabriele Varani
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Gabriele Varanicomputer-science Degrees
Computer Science
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Computational Linguistics
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#928
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Machine Learning
#1733
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#1756
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Artificial Intelligence
#1976
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#2010
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Computer Science
Gabriele Varani's Degrees
- Masters Computer Science Stanford University
- Bachelors Computer Science University of California, Berkeley
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(Suggest an Edit or Addition)Gabriele Varani's Published Works
Number of citations in a given year to any of this author's works
Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- Design of a Novel Globular Protein Fold with Atomic-Level Accuracy (2003) (1522)
- RNA-binding proteins: modular design for efficient function (2007) (1131)
- Solution structure of an unusually stable RNA hairpin, 5GGAC(UUCG)GUCC (1990) (364)
- The structure and function of small nucleolar ribonucleoproteins (2007) (361)
- RNA recognition by a Staufen double‐stranded RNA‐binding domain (2000) (356)
- The G x U wobble base pair. A fundamental building block of RNA structure crucial to RNA function in diverse biological systems. (2000) (355)
- The structure of the human immunodeficiency virus type-1 TAR RNA reveals principles of RNA recognition by Tat protein. (1995) (337)
- NMR investigation of RNA structure (1996) (330)
- Structure of an unusually stable RNA hairpin. (1991) (314)
- RNA recognition by RNP proteins during RNA processing. (1998) (309)
- Current topics in RNA-protein recognition: control of specificity and biological function through induced fit and conformational capture. (2001) (309)
- Exceptionally stable nucleic acid hairpins. (1995) (274)
- Targeting RNA with small-molecule drugs: therapeutic promise and chemical challenges. (2001) (257)
- Structure of the P1 helix from group I self-splicing introns. (1995) (250)
- Specificity of ribonucleoprotein interaction determined by RNA folding during complex formation (1996) (244)
- Structure of tau exon 10 splicing regulatory element RNA and destabilization by mutations of frontotemporal dementia and parkinsonism linked to chromosome 17. (1999) (240)
- Structure of HIV-1 TAR RNA in the absence of ligands reveals a novel conformation of the trinucleotide bulge. (1996) (230)
- An inhibitor of the Tat/TAR RNA interaction that effectively suppresses HIV-1 replication. (1997) (230)
- The conformation of loop E of eukaryotic 5S ribosomal RNA. (1993) (223)
- RNA structure and NMR spectroscopy (1991) (204)
- Protein families and RNA recognition (2005) (159)
- Structural basis of the RNA‐binding specificity of human U1A protein (1997) (158)
- Solution structure of the N-terminal RNP domain of U1A protein: the role of C-terminal residues in structure stability and RNA binding. (1996) (158)
- Recognition of GU‐rich polyadenylation regulatory elements by human CstF‐64 protein (2003) (157)
- Eukaryotic translation initiation: there are (at least) two sides to every story (2000) (152)
- Cooperative interaction of transcription termination factors with the RNA polymerase II C-terminal domain (2010) (149)
- Simultaneous recognition of HIV-1 TAR RNA bulge and loop sequences by cyclic peptide mimics of Tat protein (2009) (145)
- The Highly Cooperative Folding of Small Naturally Occurring Proteins Is Likely the Result of Natural Selection (2007) (140)
- The NMR structure of the 38 kDa U1A protein – PIE RNA complex reveals the basis of cooperativity in regulation of polyadenylation by human U1A protein (2000) (134)
- Rational design of inhibitors of HIV-1 TAR RNA through the stabilisation of electrostatic "hot spots". (2004) (130)
- Faculty Opinions recommendation of Arsenic trioxide controls the fate of the PML-RARalpha oncoprotein by directly binding PML. (2010) (126)
- Recent advances in RNA-protein recognition. (2001) (124)
- The Cbf5–Nop10 complex is a molecular bracket that organizes box H/ACA RNPs (2005) (120)
- A New Method To Detect Long-Range Protein−RNA Contacts: NMR Detection of Electron−Proton Relaxation Induced by Nitroxide Spin-Labeled RNA (1998) (117)
- A novel mutation at position +12 in the intron following Exon 10 of the tau gene in familial frontotemporal dementia (FTD‐Kumamoto) (2000) (116)
- Comprehensive computational design of ordered peptide macrocycles (2017) (114)
- A conserved RNA structure within the HCV IRES eIF3-binding site (2002) (112)
- Real-time multidimensional NMR follows RNA folding with second resolution (2010) (98)
- The G·U wobble base pair (2000) (95)
- Engineering RNA‐binding proteins for biology (2013) (90)
- Strong correlation between SHAPE chemistry and the generalized NMR order parameter (S2) in RNA. (2008) (90)
- High-resolution Structural and Thermodynamic Analysis of Extreme Stabilization of Human Procarboxypeptidase by Computational Protein Design (2007) (87)
- Mitochondrial cytochromes c: a comparative analysis (1999) (87)
- Faculty Opinions recommendation of Systematic discovery of structural elements governing stability of mammalian messenger RNAs. (2012) (85)
- The Seattle Structural Genomics Center for Infectious Disease (SSGCID). (2009) (85)
- α-Sheet secondary structure in amyloid β-peptide drives aggregation and toxicity in Alzheimer’s disease (2019) (83)
- Validation of automated docking programs for docking and database screening against RNA drug targets. (2004) (81)
- Structural mimicry of retroviral tat proteins by constrained beta-hairpin peptidomimetics: ligands with high affinity and selectivity for viral TAR RNA regulatory elements. (2004) (81)
- Structure of the acceptor stem of Escherichia coli tRNA Ala: role of the G3.U70 base pair in synthetase recognition. (1997) (79)
- Structural basis for recognition of the RNA major groove in the tau exon 10 splicing regulatory element by aminoglycoside antibiotics. (2000) (78)
- Structural basis for stabilization of the tau pre-mRNA splicing regulatory element by novantrone (mitoxantrone). (2009) (78)
- Applications of NMR to structure determination of RNAs large and small. (2017) (77)
- Decrypting noncoding RNA interactions, structures, and functional networks (2019) (75)
- How accurately and precisely can RNA structure be determined by NMR? (1997) (71)
- A new hydrogen-bonding potential for the design of protein-RNA interactions predicts specific contacts and discriminates decoys. (2004) (71)
- NMR studies of U1 snRNA recognition by the N‐terminal RNP domain of the human U1A protein. (1994) (70)
- Structure-guided peptidomimetic design leads to nanomolar beta-hairpin inhibitors of the Tat-TAR interaction of bovine immunodeficiency virus. (2007) (69)
- Structure of the polyadenylation regulatory element of the human U1A pre-mRNA 3'-untranslated region and interaction with the U1A protein. (1996) (69)
- The major HIV-1 packaging signal is an extended bulged stem loop whose structure is altered on interaction with the Gag polyprotein. (2000) (68)
- Inhibition of Both HIV-1 Reverse Transcription and Gene Expression by a Cyclic Peptide that Binds the Tat-Transactivating Response Element (TAR) RNA (2011) (67)
- The C-terminal Domains of Vertebrate CstF-64 and Its Yeast Orthologue Rna15 Form a New Structure Critical for mRNA 3′-End Processing* (2007) (62)
- Carbon assignments and heteronuclear coupling constants for an RNA oligonucleotide from natural abundance carbon-13-proton correlated experiments (1991) (62)
- Protein and RNA dynamics play key roles in determining the specific recognition of GU-rich polyadenylation regulatory elements by human Cstf-64 protein. (2005) (62)
- How binding of small molecule and peptide ligands to HIV-1 TAR alters the RNA motional landscape (2009) (61)
- Novel protein-protein contacts facilitate mRNA 3'-processing signal recognition by Rna15 and Hrp1. (2010) (61)
- Structure based approaches for targeting non-coding RNAs with small molecules. (2015) (61)
- Development of Small Molecules with a Noncanonical Binding Mode to HIV-1 Trans Activation Response (TAR) RNA. (2016) (60)
- Conformation and dynamics of an RNA internal loop. (1989) (60)
- Changes in side-chain and backbone dynamics identify determinants of specificity in RNA recognition by human U1A protein. (1999) (59)
- Essential structural requirements for specific recognition of HIV TAR RNA by peptide mimetics of Tat protein (2010) (58)
- How Arginine-Rich Domains Coordinate mRNA Maturation Events (2007) (57)
- An all‐atom, distance‐dependent scoring function for the prediction of protein–DNA interactions from structure (2006) (56)
- A new α‐helical extension promotes RNA binding by the dsRBD of Rnt1p RNAse III (2004) (56)
- Monitoring tat peptide binding to TAR RNA by solid-state 31P–19F REDOR NMR (2005) (56)
- 13C NMR relaxation studies of RNA base and ribose nuclei reveal a complex pattern of motions in the RNA binding site for human U1A protein. (2005) (56)
- NMR studies of dynamics in RNA and DNA by 13C relaxation. (2007) (54)
- Designed α-sheet peptides inhibit amyloid formation by targeting toxic oligomers (2014) (54)
- RNA - Protein Intermolecular Recognition (1997) (54)
- TAR RNA recognition by a cyclic peptidomimetic of Tat protein. (2005) (54)
- Structure and stability of wild-type and mutant RNA internal loops from the SL-1 domain of the HIV-1 packaging signal. (2002) (54)
- The Long Noncoding RNA CCAT2 induces chromosomal instability through BOP1 - AURKB signaling. (2020) (53)
- Rbfox proteins regulate microRNA biogenesis by sequence-specific binding to their precursors and target downstream Dicer (2016) (53)
- The H/ACA RNP assembly factor SHQ1 functions as an RNA mimic. (2011) (52)
- Simple yet functional phosphate-loop proteins (2018) (51)
- Reconstitution of the CstF complex unveils a regulatory role for CstF-50 in recognition of 3′-end processing signals (2017) (50)
- Carbon-Proton Scalar Couplings in RNA: 3D Heteronuclear and 2D Isotope-Edited NMR of a 13C-Labeled Extra-stable Hairpin (1994) (50)
- The box H/ACA RNP assembly factor Naf1p contains a domain homologous to Gar1p mediating its interaction with Cbf5p. (2007) (49)
- A Macrocyclic Peptide Ligand Binds the Oncogenic MicroRNA-21 Precursor and Suppresses Dicer Processing. (2017) (49)
- RNA/Peptide Binding Driven by Electrostatics-Insight from Bidirectional Pulling Simulations. (2013) (49)
- The structure of an enzyme-activating fragment of human telomerase RNA. (2005) (48)
- Structure of stem‐loop IV of Tetrahymena telomerase RNA (2006) (48)
- Structural genomics of infectious disease drug targets: the SSGCID (2011) (48)
- Structure of a low-population binding intermediate in protein-RNA recognition (2016) (48)
- A knowledge‐based potential function predicts the specificity and relative binding energy of RNA‐binding proteins (2007) (47)
- Structure-based and combinatorial search for new RNA-binding drugs. (1999) (47)
- A small-molecule probe induces a conformation in HIV TAR RNA capable of binding drug-like fragments. (2011) (47)
- Mitoxantrone analogues as ligands for a stem-loop structure of tau pre-mRNA. (2009) (46)
- Rtr1 is a dual specificity phosphatase that dephosphorylates Tyr1 and Ser5 on the RNA polymerase II CTD. (2014) (45)
- The solution structure of an essential stem-loop of human telomerase RNA. (2003) (44)
- Design of β-Hairpin Peptidomimetics That Inhibit Binding of α-Helical HIV-1 Rev Protein to the Rev Response Element RNA† (2007) (43)
- Solid-state deuterium NMR studies reveal micros-ns motions in the HIV-1 transactivation response RNA recognition site. (2008) (43)
- Effect of glycerol on the physical and mechanical properties of thin gellan gum films for oral drug delivery (2018) (43)
- The hepatitis C virus internal ribosome-entry site: a new target for antiviral research. (2001) (43)
- The interactome of the atypical phosphatase Rtr1 in Saccharomyces cerevisiae. (2014) (41)
- A cap for all occasions. (1997) (41)
- Structure and mechanism of a molecular rheostat, an RNA thermometer that modulates immune evasion by Neisseria meningitidis (2016) (41)
- Intermediate rate atomic trajectories of RNA by solid-state NMR spectroscopy. (2010) (40)
- The TFIIIA recognition fragment d(GGATGGGAG).d(CTCCCATCC) is B-form in solution. (1988) (40)
- Design of a tunable nanocomposite double network hydrogel based on gellan gum for drug delivery applications (2018) (40)
- Preparation of RNA:protein complexes for X-ray crystallography and NMR (1998) (39)
- 13C/15N-19F intermolecular REDOR NMR study of the interaction of TAR RNA with Tat peptides. (2010) (39)
- γ-AApeptides bind to RNA by mimicking RNA-binding proteins. (2011) (38)
- Binding of U1A protein changes RNA dynamics as observed by 13C NMR relaxation studies. (2007) (38)
- Recent solution structures of RNA and its complexes with drugs, peptides and proteins. (1997) (37)
- Targeted inhibition of oncogenic miR-21 maturation with designed RNA-binding proteins (2016) (37)
- A novel small-molecule binds to the influenza A virus RNA promoter and inhibits viral replication. (2014) (37)
- Structure of the yeast SR protein Npl3 and Interaction with mRNA 3'-end processing signals. (2008) (36)
- Nucleic acids structure and recognition. (1997) (36)
- The stereospecific assignment of H5' and H5'' in RNA using the sign of two-bond carbon-proton scalar couplings (1993) (35)
- Hydration dependent dynamics in RNA (2009) (35)
- A new alpha-helical extension promotes RNA binding by the dsRBD of Rnt1p RNAse III. (2004) (35)
- Determination of the NMR structure of the complex between U1A protein and its RNA polyadenylation inhibition element (1998) (31)
- Correlation of deformability at a tRNA recognition site and aminoacylation specificity. (1999) (30)
- An ultra-high affinity ligand of HIV-1 TAR reveals the RNA structure recognized by P-TEFb (2018) (29)
- Molecular dynamics simulations identify time scale of conformational changes responsible for conformational selection in molecular recognition of HIV-1 transactivation responsive RNA. (2014) (29)
- Primordial emergence of a nucleic acid-binding protein via phase separation and statistical ornithine-to-arginine conversion (2020) (28)
- Mis-translation of a computationally designed protein yields an exceptionally stable homodimer: implications for protein engineering and evolution. (2006) (28)
- miRNA sensitivity to Drosha levels correlates with pre-miRNA secondary structure (2014) (27)
- Primordial emergence of a nucleic acid binding protein via phase separation and statistical ornithine to arginine conversion (2020) (27)
- The box H/ACA snoRNP assembly factor Shq1p is a chaperone protein homologous to Hsp90 cochaperones that binds to the Cbf5p enzyme. (2009) (27)
- Molecular dynamics simulation of the RNA complex of a double-stranded RNA-binding domain reveals dynamic features of the intermolecular interface and its hydration. (2002) (27)
- Multivalent Drug Design and Inhibition of Cholera Toxin by Specific and Transient Protein–Ligand Interactions (2008) (26)
- A promoter-proximal transcript targeted by genetic polymorphism controls E-cadherin silencing in human cancers (2017) (26)
- Solution structure of the influenza A virus cRNA promoter: implications for differential recognition of viral promoter structures by RNA-dependent RNA polymerase. (2003) (25)
- Targeting Influenza A Virus RNA Promoter (2015) (25)
- Novel three-dimensional 1H−13C−31P triple resonance experiments for sequential backbone correlations in nucleic acids (1995) (25)
- Counterion Redistribution upon Binding of a Tat-Protein Mimic to HIV-1 TAR RNA. (2012) (23)
- High-resolution structural validation of the computational redesign of human U1A protein. (2006) (23)
- Identification of the optimal third generation antifolate against P. falciparum and P. vivax. (2005) (23)
- Different phosphoisoforms of RNA polymerase II engage the Rtt103 termination factor in a structurally analogous manner (2017) (22)
- How a rotavirus hijacks the human protein synthesis machinery (2002) (22)
- High blood flow shear stress values are associated with circulating tumor cells cluster disaggregation in a multi-channel microfluidic device (2021) (21)
- RNA-Protein Intermolecular Recognition (1997) (21)
- Experimental and Modeling Study of Drug Release from HPMC-Based Erodible Oral Thin Films (2018) (21)
- Preparation of RNA samples with narrow line widths for solid state NMR investigations. (2012) (20)
- Cell-free production of functional Plasmodium falciparum dihydrofolate reductase-thymidylate synthase. (2007) (19)
- DESIGN AND CHARACTERIZATION OF A BIOCOMPATIBLE PHYSICAL HYDROGEL BASED ON SCLEROGLUCAN FOR TOPICAL DRUG DELIVERY. (2017) (18)
- Design of beta-hairpin peptidomimetics that inhibit binding of alpha-helical HIV-1 Rev protein to the rev response element RNA. (2007) (18)
- The structure of a Burkholderia pseudomallei immunophilin-inhibitor complex reveals new approaches to antimicrobial development. (2011) (18)
- 13C relaxation studies of the DNA target sequence for hhai methyltransferase reveal unique motional properties. (2008) (18)
- Investigating the Role of Polydopamine to Modulate Stem Cell Adhesion and Proliferation on Gellan Gum-Based Hydrogels. (2020) (18)
- Cell-free selection of RNA-binding proteins using in vitro compartmentalization (2008) (17)
- The C terminus of Pcf11 forms a novel zinc-finger structure that plays an essential role in mRNA 3′-end processing (2017) (17)
- Interactions of protein side chains with RNA defined with REDOR solid state NMR (2011) (17)
- A Model for C74 Addition by CCA-adding Enzymes (2006) (17)
- Examining the relationship between RNA function and motion using nuclear magnetic resonance (2012) (16)
- Finding the missing code of RNA recognition by PUF proteins. (2011) (16)
- Recognition of HIV-1 TAR RNA by Tat protein and Tat-derived peptides (1998) (16)
- Furanose dynamics in the HhaI methyltransferase target DNA studied by solution and solid-state NMR relaxation. (2008) (16)
- Structural and biochemical analysis of the assembly and function of the yeast pre-mRNA 3′ end processing complex CF I (2012) (16)
- Fragment‐based discovery of novel thymidylate synthase leads by NMR screening and group epitope mapping (2010) (16)
- Nuclear magnetic resonance methods to study structure and dynamics of RNA-protein complexes. (2001) (16)
- Aminoglycoside antibiotics bind to the influenza A virus RNA promoter. (2012) (16)
- Nop10 is a conserved H/ACA snoRNP molecular adaptor. (2008) (15)
- The role of the solvent on the binding of ethidium bromide to DNA in alcohol–water mixtures (1986) (15)
- 3D fluid-dynamic ovarian cancer model resembling systemic drug administration for efficacy assay. (2020) (14)
- NMR studies of protein-nucleic acid interactions. (2004) (14)
- Multimodal Long Noncoding RNA Interaction Networks: Control Panels for Cell Fate Specification (2019) (13)
- DNA melting induced by alcohols: Role of the solvent properties (1985) (13)
- Structural biology: RNA switches function (2006) (12)
- Decoding RNA motional codes. (2006) (12)
- Slow exchange model of nonrigid rotational motion in RNA for combined solid-state and solution NMR studies. (2010) (12)
- Comparative analysis of glutaredoxin domains from bacterial opportunistic pathogens (2011) (11)
- Ultraslow Domain Motions in HIV-1 TAR RNA Revealed by Solid-State Deuterium NMR. (2017) (11)
- Delivering messages from the 3′ end (2001) (11)
- Theory of nonrigid rotational motion applied to NMR relaxation in RNA. (2011) (10)
- 3D Perfusable Hydrogel Recapitulating the Cancer Dynamic Environment to in Vitro Investigate Metastatic Colonization (2020) (10)
- An evolutionarily conserved RNA structure in the functional core of the lincRNA Cyrano (2020) (10)
- Structure of the RNA specialized translation initiation element that recruits eIF3 to the 5'-UTR of c-Jun. (2020) (10)
- A microbial sensor platform based on bacterial bioluminescence (luxAB) and green fluorescent protein (gfp) reporters for in situ monitoring of toxicity of wastewater nitrification process dynamics. (2021) (10)
- Independent alignment of RNA for dynamic studies using residual dipolar couplings (2012) (10)
- Molecular basis for the increased affinity of an RNA recognition motif with re-engineered specificity: A molecular dynamics and enhanced sampling simulations study (2018) (9)
- Novel techniques in nuclear magnetic resonance for nucleic acids. (1995) (9)
- Elucidating Molecular Motion through Structural and Dynamic Filters of Energy-Minimized Conformer Ensembles (2014) (8)
- Faculty Opinions recommendation of MicroRNA silencing for cancer therapy targeted to the tumour microenvironment. (2014) (8)
- Contrasting views of the internal dynamics of the HhaI methyltransferase target DNA reported by solution and solid-state NMR spectroscopy. (2006) (8)
- High-Tech and Nature-Made Nanocomposites and Their Applications in the Field of Sensors and Biosensors for Gas Detection (2020) (7)
- Twenty years of RNA: the discovery of microRNAs (2015) (7)
- Differential drug binding by the highly conserved Plasmodium falciparum thymidylate synthase. (2005) (7)
- NMR structure of Dengue West Nile viruses stem-loop B: A key cis-acting element for flavivirus replication. (2020) (7)
- Faculty Opinions recommendation of Kemp elimination catalysts by computational enzyme design. (2008) (7)
- Structural determinants of RNA function (1991) (7)
- NMR structure of an acyl-carrier protein from Borrelia burgdorferi (2011) (6)
- GFT projection NMR for efficient 1H/13C sugar spin system identification in nucleic acids (2012) (6)
- Solvation thermodynamics of ethidium bromide in mixed solvents (1988) (6)
- Genome-wide association studies reveal the role of polymorphisms affecting factor H binding protein expression in host invasion by Neisseria meningitidis (2021) (6)
- Multimodal Long Noncoding RNA Interaction Networks: Control Panels for Cell Fate Specification. (2019) (5)
- A Small Cyclic β‐Hairpin Peptide Mimics the Rbfox2 RNA Recognition Motif and Binds to the Precursor miRNA 20b (2019) (5)
- Efficient NMR Screening Approach to Discover Small Molecule Fragments Binding Structured RNA. (2021) (5)
- Nonspecific interactions in dye binding to DNA. Influence of alcohols and amides. (1987) (5)
- The HIV Tat-TAR interaction, a novel target for drug discovery (1998) (5)
- Decision making based on hybrid modeling approach applied to cellulose acetate based historical films conservation (2021) (4)
- Multimodal Long Noncoding RNA Interaction Networks: Control Panels for Cell Fate Specification. (2019) (4)
- Correction: A novel small-molecule binds to the influenza A virus RNA promoter and inhibits viral replication (2014) (3)
- Innovative Eco-Friendly Conductive Ink Based on Carbonized Lignin for the Production of Flexible and Stretchable Bio-Sensors. (2021) (3)
- Nuclear magnetic resonance methods to study RNA-protein complexes. (2000) (3)
- Splicing factor 1 in the pocket. (2003) (3)
- A slow dynamic RNA switch regulates processing of microRNA-21 (2021) (3)
- Locking out viral replication. (2009) (3)
- An Allosteric Switch Primes Sequence-Specific DNA Recognition (2019) (3)
- Comparative structure, dynamics and evolution of acyl-carrier proteins from Borrelia burgdorferi, Brucella melitensis and Rickettsia prowazekii. (2020) (3)
- Structure of the Dengue Virus RNA Promoter (2022) (3)
- Design of RNA-targeting macrocyclic peptides. (2019) (3)
- Fluorescence of ethidium bromide in alcohol–water solutions (1987) (3)
- Targeting RNA with Small-Molecule Drugs: Therapeutic Promise and Chemical Challenges (2001) (3)
- Recognition of HIV TAR RNA by peptide mimetic of Tat protein (2010) (2)
- Unifying Solution and Solid-State NMR Studies of Nucleic Acid Dynamics (2010) (2)
- Non-Watson-Crick base pairs and RNA structure (1994) (2)
- Correction to "Theory of nonrigid rotational motion applied to NMR relaxation in RNA". (2012) (2)
- 5 – RNA—Protein Recognition during RNA Processing and Maturation* (1998) (2)
- Pseudoelectrostatic effects in the thermodynamics of dye binding to DNA (1985) (1)
- NMR STRUCTURE OF TAU EXON 10 SPLICING REGULATORY ELEMENT RNA (1999) (1)
- Author response: Designed α-sheet peptides inhibit amyloid formation by targeting toxic oligomers (2014) (1)
- Molecular Interactions in Complex Assemblies of Proteins and Nucleic Acids (1999) (1)
- On the binding of ligands to macromolecules: an accurate procedure (1983) (1)
- How proteins and RNA recognize each other (2005) (1)
- The H / ACA RNP assembly factor SHQ 1 functions as an RNA mimic Material Supplemental (2011) (1)
- Drug-like small molecules that inhibit expression of the oncogenic microRNA-21 (2022) (1)
- Quantum dots functionalised artificial peptides bioinspired to the D1 protein from the Photosystem II of Chlamydomonas reinhardtii for endocrine disruptor optosensing. (2020) (1)
- ARG-BOUND TAR RNA, NMR (1996) (1)
- Solvation effects and the mechanism of drug-DNA binding. (1988) (1)
- Faculty Opinions recommendation of Mutations in FUS, an RNA processing protein, cause familial amyotrophic lateral sclerosis type 6. (2009) (1)
- High-Sensitivity Metal Oxide Sensors Duplex for On-the-Field Detection of Acetic Acid Arising from the Degradation of Cellulose Acetate-Based Cinematographic and Photographic Films (2022) (1)
- Faculty Opinions recommendation of Modulation of HIV-1 replication by RNA interference. (2002) (1)
- Swelling and drug release from oral thin films (OTFs) (2016) (0)
- NMR structure of a synthetic small molecule, rbt203, bound to HIV-1 TAR RNA (2004) (0)
- Solution structure of Glutaredoxin from Brucella melitensis. Seattle Structure Genomics Center for Infectious Disease (SSGCID) (Target ID BrabA.00079.a) (2009) (0)
- Faculty Opinions recommendation of CLIP identifies Nova-regulated RNA networks in the brain. (2004) (0)
- P1 HELIX NUCLEIC ACIDS (DNA/RNA) RIBONUCLEIC ACID (1995) (0)
- Faculty Opinions recommendation of Comprehensive proteomic analysis of the human spliceosome. (2002) (0)
- Solution structure of Rbfox2 RRM mimetic peptide CPfox7 (2019) (0)
- Crystal structure of Top7: A computationally designed protein with a novel fold (2003) (0)
- Structure of CssA4 (bottom stem) of CssA thermometer (2016) (0)
- Intermediate state lying on the pathway of release of Tat from HIV-1 TAR. (2016) (0)
- Faculty Opinions recommendation of An eIF4AIII-containing complex required for mRNA localization and nonsense-mediated mRNA decay. (2004) (0)
- Faculty Opinions recommendation of JMJD6 is a histone arginine demethylase. (2007) (0)
- Excited state (Bound-like) sampled during RDC restrained Replica-averaged Metadynamics (RAM) simulations of the HIV-1 TAR complexed with cyclic peptide mimetic of Tat (2016) (0)
- Erratum: Structure of HIV-1 TAR RNA in the absence of ligands reveals a novel conformation of the trinucleotide bulge (Nucleic Acids Research (1996) 24 (3974-3981)) (1996) (0)
- Faculty Opinions recommendation of Sensing small molecules by nascent RNA: a mechanism to control transcription in bacteria. (2003) (0)
- Faculty Opinions recommendation of Nrd1 interacts with the nuclear exosome for 3' processing of RNA polymerase II transcripts. (2006) (0)
- solution structure of the complex of microRNA 20b pre-element with Rbfox RRM (2016) (0)
- NMR structure of an acyl-carrier protein from Rickettsia prowazekii, Seattle Structural Genomics Center for Infectious Disease (SSGCID) (2012) (0)
- Chemical probe bound to HIV TAR RNA (2011) (0)
- Faculty Opinions recommendation of A miniature yeast telomerase RNA functions in vivo and reconstitutes activity in vitro. (2006) (0)
- Faculty of 1000 evaluation for Predictive identification of exonic splicing enhancers in human genes. (2012) (0)
- Solution NMR structure of 5'UTR of Stem loop B in DENV4 (2020) (0)
- 2C01 Tertiary Structure of RNA and its Function (1997) (0)
- Faculty Opinions recommendation of Control of human potassium channel inactivation by editing of a small mRNA hairpin. (2004) (0)
- Solution structure of putative oxidoreductase from Ehrlichia chaffeensis. (Seattle Structural Genomics Center for Infectious Disease (SSGCID)) (2011) (0)
- Faculty Opinions recommendation of Structure and function of the 5'-->3' exoribonuclease Rat1 and its activating partner Rai1. (2009) (0)
- Faculty Opinions recommendation of Structural basis for the modular recognition of single-stranded RNA by PPR proteins. (2014) (0)
- Solution structure of Rbfox2 RRM mimetic peptide CPfox6 (2019) (0)
- NMR structure of a synthetic small molecule, rbt158, bound to HIV-1 TAR RNA (2004) (0)
- Faculty Opinions recommendation of A common sequence motif determines the Cajal body-specific localization of box H/ACA scaRNAs. (2003) (0)
- RNA structure and scalar coupling constants (1994) (0)
- Faculty Opinions recommendation of Fast production of homogeneous recombinant RNA--towards large-scale production of RNA. (2012) (0)
- Solution structure of the influenza A virus cRNA promoter: implications for differential recognition of viral promoter structures by RNA-dependent RNA polymerase (0)
- Advances and Challenges in Protein-RNA Recognition, Regulation and Prediction (Dagstuhl Seminar 19342) (2019) (0)
- Solution structure of Rbfox2 RRM mimetic peptide CPfox5 (2019) (0)
- Faculty Opinions recommendation of A small molecule enhances RNA interference and promotes microRNA processing. (2008) (0)
- Crystal structure of rnt1p dsRBD (2004) (0)
- Faculty Opinions recommendation of An RNA gene expressed during cortical development evolved rapidly in humans. (2006) (0)
- Behind Every Good Metabolite there is a Great Enzyme (and perhaps a (2012) (0)
- RNA-BINDING DOMAIN OF THE U1A SPLICEOSOMAL PROTEIN U1A117, NMR, 43 STRUCTURES (1996) (0)
- Structure-Based Design of RNA-Binding Peptides (2019) (0)
- Independent alignment of RNA for dynamic studies using residual dipolar couplings (2012) (0)
- Faculty Opinions recommendation of Efficient delivery of RNAi prodrugs containing reversible charge-neutralizing phosphotriester backbone modifications. (2014) (0)
- Solution structure of Glutaredoxin from Brucella melitensis (2009) (0)
- The kinase inhibitor Palbociclib is a potent and specific RNA-binding molecule (2022) (0)
- NMR Structural analysis of archaeal Nop10 (2005) (0)
- Structure of wild type pre-miR21 apical loop (2017) (0)
- 344 STRUCTURAL CHARACTERIZATION OF A COMPUTATIONALLY REDESIGNED GLOBULAR PROTEIN PROCARBOXYPEPTIDASE (2005) (0)
- ACCEPTOR STEM, NMR, 30 STRUCTURES (1997) (0)
- CIS-ACTING RNA REGULATORY ELEMENT (HIV-1 TAR), NMR, 20 STRUCTURES (1997) (0)
- RNA-Protein Interactions and Protein-Protein Interactions during Regulation of Eukaryotic Gene Expression (1998) (0)
- Crystal structure of K.lactis Rtr1 NTD (2014) (0)
- Two distinct binding modes provide the RNA-binding protein RbFox with extraordinary sequence specificity (2021) (0)
- U1A-UTRRNA, NMR, 31 STRUCTURES (1998) (0)
- Faculty Opinions recommendation of AC1MMYR2, an inhibitor of dicer-mediated biogenesis of Oncomir miR-21, reverses epithelial-mesenchymal transition and suppresses tumor growth and progression. (2014) (0)
- Solution structure of acyl CoA binding protein from Babesia bovis T2Bo (2011) (0)
- Crystal structure of CstF-50 in complex with CstF-77 (2017) (0)
- Solution structure of peptidyl-prolyl cis-trans isomerase from Burkholderia pseudomallei. Seattle Structure Genomics Center for Infectious Disease (SSGCID) (2009) (0)
- Solution structure of a c-JUN 5' UTR stem-loop associated with specialized cap-dependent translation initiation (2020) (0)
- Solution NMR Structure of 5'UTR Stem Loop B in DENV4 Flavivirus. (2020) (0)
- Backbone 1H, 13C, and 15N Chemical Shift Assignments and NMR structure for potential drug target from Burkholderia thailandensis E264 (2014) (0)
- Role of solvation on dye fluorescence (1988) (0)
- Faculty Opinions recommendation of Transcript-assisted transcriptional proofreading. (2006) (0)
- Faculty Opinions recommendation of RNA molecules stimulate prion protein conversion. (2004) (0)
- Structure of Shq1p C-terminal domain (2011) (0)
- RNA Structure and RNA-Protein Recognition During Regulation of Eukaryotic Gene Expression (1999) (0)
- NMR structure of C-terminal domain of human CstF-64 (2006) (0)
- Faculty Opinions recommendation of Single molecule profiling of alternative pre-mRNA splicing. (2003) (0)
- SOLUTION STRUCTURE OF THE COMPLEMENTARY RNA PROMOTER OF INFLUENZA A VIRUS (2003) (0)
- Solution structure of peptidyl-prolyl cis-trans isomerase from Burkholderia pseudomallei complexed with 1-{[(4-methylphenyl)thio]acetyl}piperidine (2010) (0)
- Faculty Opinions recommendation of Substrate-specific structural rearrangements of human Dicer. (2013) (0)
- Ground state sampled during RDC restrained Replica-averaged Metadynamics (RAM) simulations of the HIV-1 TAR complexed with cyclic peptide mimetic of Tat (2016) (0)
- 1H, 13C and 15N Resonance Assignments of URNdesign, a Computationally Redesigned RRM Protein (2005) (0)
- Solution structure of microRNA 20b pre-element (2016) (0)
- 1H, 13C, and 15N Chemical Shift Assignments and structure of Probable Fe(2+)-trafficking protein from Burkholderia pseudomallei 1710b. (2015) (0)
- NMR structure of the high mobility group protein-like protein NHP1 from Babesia bovis T2Bo (BaboA.00841.a) (2011) (0)
- NMR Assignments and structure of Translation initiation factor IF-1 from Burkholderia thailandensis E264. (2015) (0)
- Solution structure of an alpha sheet hairpin peptide (2019) (0)
- Faculty Opinions recommendation of Regulation of alternative splicing by histone modifications. (2010) (0)
- Solution structure of Rbfox2 RRM mimetic peptide CPfox4 (2019) (0)
- Solution Structure of cellobiose-specific phosphotransferase IIB component protein from Borrelia burgdorferi (2010) (0)
- RNA-protein recognition during RNA maturation and development. (1997) (0)
- Solution Structure of lncRNA (LINK-A) 20-nt Hexaloop Hairpin (2020) (0)
- A functional SNP regulates E-cadherin expression by dynamically remodeling the 3D structure of a promoter-associated non-coding RNA transcript (2021) (0)
- 200 Potent inhibition of HIV replication by RNA-binding peptide mimetics with unprecedented specificity (2013) (0)
- GFT projection NMR for efficient 1H/13C sugar spin system identification in nucleic acids (2012) (0)
- NMR STRUCTURE OF THE COMPLEX BETWEEN THE THIRD DSRBD FROM DROSOPHILA STAUFEN AND A RNA HAIRPIN (2000) (0)
- NMR structure of Acyl carrier protein from Brucella melitensis (2010) (0)
- Interdomain RRM packing contributes to RNA recognition in the rna15, hrp1, anchor RNA 3' processing ternary complex (2010) (0)
- Advances and Challenges in Protein-RNA Recognition, Regulation and Prediction (2015) (0)
- Solution structure of small molecule-influenza RNA complex (2012) (0)
- Structure of wild-type and mutant internal loops from the SL-1 domain of the HIV-1 packaging signal (2002) (0)
- Faculty Opinions recommendation of The structure of DNA in the nucleosome core. (2003) (0)
- Solution structure of Rnt1p dsRBD (2004) (0)
- Solution NMR structure of 5' UTR stem loop B from West Nile Virus (2020) (0)
- Solution structure of peptidyl-prolyl cis-trans isomerase from Burkholderia pseudomallei complexed with Cycloheximide-N-ethylethanoate (2009) (0)
- Solution structure of peptidyl-prolyl cis-trans isomerase from Burkholderia pseudomallei (2009) (0)
- P6.1 stem loop from the activation domain of hTR (2003) (0)
- Solution structure of Rtt103 CTD interacting domain (2010) (0)
- Faculty Opinions recommendation of Functional characterization of the antibiotic resistance reservoir in the human microflora. (2009) (0)
- Solution structure of de novo macrocycle design12_ss (2017) (0)
- NMR Assignment and structure of CssA Thermometer from Neisseria meningitidis (2016) (0)
- Solution Structure of acyl carrier protein from Borrelia burgdorferi (2010) (0)
- Backbone 1H, 13C, and 15N Chemical Shift Assignments and structure of Iron-sulfur cluster binding protein from Ehrlichia chaffeensis (2014) (0)
- Structural and Biophysical Characterization of the GAF Domains from Phosphodiesterases 5 and 6 (2009) (0)
- Faculty Opinions recommendation of Simultaneous determination of protein structure and dynamics. (2005) (0)
- Theory of Non-rigid Rotational Motion Applied to NMR Relaxation in RNA (Correction) (2015) (0)
- O7 Structural solution of the HIV-1 packaging signal and use of RNA transcripts containing the signal as potential antiviral molecules (2000) (0)
- Faculty Opinions recommendation of A genomic code for nucleosome positioning. (2006) (0)
- NMR Structure of RRM-2 of Yeast NPL3 Protein (2007) (0)
- Structure of the Gar1 domain of NAf1 (2007) (0)
- NMR Structure of Shq1p N-terminal domain (2009) (0)
- Rubredoxin type protein from Mycobacterium ulcerans (2013) (0)
- Investigating RNA and DNA dynamics through nuclear magnetic resonance (2011) (0)
- Solution structure of Rtt103 CTD-interacting domain bound to a Ser2 phosphorylated CTD peptide (2010) (0)
- Faculty of 1000 evaluation for MicroRNAs modulate hematopoietic lineage differentiation. (2004) (0)
- NMR Assignment and Structure of Thioredoxin (Rv1471 ortholog) from Mycobacterium smegmatis ATCC 700084 / mc(2)155 (2017) (0)
- Solution structure of a phosphate-loop protein (2018) (0)
- Faculty Opinions recommendation of Molecular dissection of mammalian RNA polymerase II transcriptional termination. (2008) (0)
- Faculty Opinions recommendation of An intrinsically disordered C terminus allows the La protein to assist the biogenesis of diverse noncoding RNA precursors. (2011) (0)
- (Biol.NMR Supplement:854-858)Nucleic Acids Structure and Recognition (1997) (0)
- Nucleic Acids Research Nucleic Acids Research (2003) (0)
- NMR structure of a BolA-like hypothetical protein RP812 from Rickettsia prowazekii, Seattle structural genomics center for infectious disease (SSGCID) (2013) (0)
- Structure of a hepatitis C virus IRES RNA motif recognized by translation initiation factor 3 (2002) (0)
- Faculty Opinions recommendation of Reengineering orthogonally selective riboswitches. (2010) (0)
- H, 13C, and 15N Chemical Shift Assignments and structure of Thioredoxin from Mycobacterium thermoresistibile ATCC 19527 and NCTC 10409 (2017) (0)
- Faculty Opinions recommendation of Molecular structure of β-amyloid fibrils in Alzheimer's disease brain tissue. (2013) (0)
- NMR assignment and RNA structure of 5' UTR region stem loop from West Nile Virus (2020) (0)
- Polymorphisms affecting expression of the vaccine antigen factor H binding protein influence invasiveness of Neisseria meningitidis (2021) (0)
- Structure of URNdesign, a complete computational redesign of human U1A protein (2006) (0)
- Solution structure of a ultra-high affinity macrocycle bound to HIV-1 TAR RNA (2018) (0)
- Structure of the SHQ1P-CBF5P complex (2011) (0)
- Solution structure of glutaredoxin from Bartonella henselae str. Houston (2009) (0)
- Solution structure of Rbfox2 RRM mimetic peptide CPfox2 (2019) (0)
- Faculty Opinions recommendation of Origins of catalysis by computationally designed retroaldolase enzymes. (2010) (0)
- U1A-UTRRNA, NMR, 25 STRUCTURES (1997) (0)
- Computational Challenges in RNA-Based Gene Regulation: Protein-RNA Recognition, Regulation and Prediction (Dagstuhl Seminar 17252) (2017) (0)
- NMR Structure of the N-terminal RRM domain of Cleavage stimulation factor 64 KDa subunit (2003) (0)
- Metals in Perspective (2003) (0)
- Crystal Structure of the Methanococcus jannaschii Cbf5 Nop10 Complex (2005) (0)
- Faculty Opinions recommendation of An expressed pseudogene regulates the messenger-RNA stability of its homologous coding gene. (2003) (0)
- Faculty Opinions recommendation of Basis for structural diversity in homologous RNAs. (2004) (0)
- NMR structural analysis of Nop10p from Saccharomyces cerevisiae (2005) (0)
- NMR Structure of RRM-1 of Yeast NPL3 Protein (2007) (0)
- Solution structure of peptidyl-prolyl cis-trans isomerase from Burkholderia pseudomallei complexed with 1-{[(4-methylphenyl)thio]acetyl}piperidine. Seattle Structure Genomics Center for Infectious Disease (SSGCID) (2010) (0)
- NMR Assignment and NMR Structure of CssA3 (top stem) of CssA thermometer (2016) (0)
- Structure, Function, and Biogenesis of Small Nucleolar Ribonucleoprotein Particles (2013) (0)
- New RNA-binding peptidomimetic structures that repress HIV viral replication by specifically inhibiting transcriptional activation (2008) (0)
- Solution Structure of the RNA element that recruits eIF3 to the 5'-UTR of c-Jun and regulates specialized translation initiation (apical loop) (2020) (0)
- NMR Assignment and structure of CssA5 (middle region) of CssA thermometer from Neisseria meningitidis (2016) (0)
- Structure of CCHC zinc finger domain of Pcf11 (2016) (0)
- An inhibitor of the Tat (cid:121) TAR RNA interaction that effectively suppresses HIV-1 replication (1997) (0)
- Faculty Opinions recommendation of Splicing of oskar RNA in the nucleus is coupled to its cytoplasmic localization. (2004) (0)
- Solution structure of response regulator protein from Burkholderia multivorans (2016) (0)
- NMR structure of Uncharacterized protein from Pseudomonas aeruginosa PAO1 (2016) (0)
- NMR Structure and 1H, 13C and 15N Chemical Shift Assignments for High mobility group protein from Plasmodium falciparum 3D7. (2014) (0)
- solution structure of small molecule-influenza RNA complex, Seattle Structural Genomics Center for Infectious Disease (SSGCID) (2013) (0)
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What Schools Are Affiliated With Gabriele Varani?
Gabriele Varani is affiliated with the following schools:
