Ghassan Hamarneh
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Computer Science
Ghassan Hamarneh's Degrees
- PhD Computer Science Simon Fraser University
- Masters Computer Science Simon Fraser University
- Bachelors Computer Science University of Jordan
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(Suggest an Edit or Addition)Ghassan Hamarneh's Published Works
Number of citations in a given year to any of this author's works
Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- A Survey on Shape Correspondence (2011) (661)
- BrainNetCNN: Convolutional neural networks for brain networks; towards predicting neurodevelopment (2017) (347)
- Deep semantic segmentation of natural and medical images: a review (2019) (343)
- Deep features to classify skin lesions (2016) (240)
- Seven-Point Checklist and Skin Lesion Classification Using Multitask Multimodal Neural Nets (2019) (188)
- Combo Loss: Handling Input and Output Imbalance in Multi-Organ Segmentation (2018) (161)
- Segmentation of Intra-Retinal Layers From Optical Coherence Tomography Images Using an Active Contour Approach (2011) (160)
- N-Sift: N-Dimensional Scale Invariant Feature Transform for Matching Medical Images (2007) (160)
- Watershed segmentation using prior shape and appearance knowledge (2009) (151)
- Adversarial Stain Transfer for Histopathology Image Analysis (2018) (148)
- Active Learning for Interactive 3D Image Segmentation (2011) (143)
- Multi-resolution-Tract CNN with Hybrid Pretrained and Skin-Lesion Trained Layers (2016) (143)
- Topology Aware Fully Convolutional Networks for Histology Gland Segmentation (2016) (142)
- VascuSynth: Simulating vascular trees for generating volumetric image data with ground-truth segmentation and tree analysis (2010) (136)
- Deformable Organisms for Automatic Medical Image Analysis (2001) (118)
- Evaluation of Three Algorithms for the Segmentation of Overlapping Cervical Cells (2017) (117)
- n -SIFT: n -Dimensional Scale Invariant Feature Transform (2009) (115)
- Intra-retinal Layer Segmentation in Optical Coherence Tomography Using an Active Contour Approach (2009) (114)
- Evaluation and Comparison of Anatomical Landmark Detection Methods for Cephalometric X-Ray Images: A Grand Challenge (2015) (108)
- Automated tracking of muscle fascicle orientation in B-mode ultrasound images. (2009) (105)
- A Review of Super-Resolution Single-Molecule Localization Microscopy Cluster Analysis and Quantification Methods (2020) (104)
- Prior Knowledge for Part Correspondence (2011) (100)
- Combining snakes and active shape models for segmenting the human left ventricle in echocardiographic images (2000) (97)
- Star Shape Prior in Fully Convolutional Networks for Skin Lesion Segmentation (2018) (91)
- Structural network analysis of brain development in young preterm neonates (2014) (89)
- Live-Vessel: Extending Livewire for Simultaneous Extraction of Optimal Medial and Boundary Paths in Vascular Images (2007) (89)
- Missing MRI Pulse Sequence Synthesis Using Multi-Modal Generative Adversarial Network (2019) (86)
- Mammography segmentation with maximum likelihood active contours (2012) (84)
- Visualization and exploration of time-varying medical image data sets (2007) (73)
- Fast Random Walker with Priors Using Precomputation for Interactive Medical Image Segmentation (2010) (64)
- 3D live-wire-based semi-automatic segmentation of medical images (2005) (63)
- The Groupwise Medial Axis Transform for Fuzzy Skeletonization and Pruning (2010) (61)
- Vessel Crawlers: 3D Physically-based Deformable Organisms for Vasculature Segmentation and Analysis (2006) (59)
- DT-MRI segmentation using graph cuts (2007) (57)
- Bilateral Filtering of Diffusion Tensor Magnetic Resonance Images (2007) (57)
- Deformable spatio-temporal shape models: extending active shape models to 2D+time (2004) (57)
- Learning to Segment Skin Lesions from Noisy Annotations (2019) (56)
- Incorporating prior knowledge in medical image segmentation: a survey (2016) (56)
- Efficient interactive 3D Livewire segmentation of complex objects with arbitrary topology (2008) (55)
- Spotlight: Automated Confidence-Based User Guidance for Increasing Efficiency in Interactive 3D Image Segmentation (2010) (55)
- Machine Learning on Human Connectome Data from MRI (2016) (54)
- Exploration and Visualization of Segmentation Uncertainty using Shape and Appearance Prior Information (2010) (54)
- Active contour models: application to oral lesion detection in color images (2000) (53)
- Implementation and comparison of four different boundary detection algorithms for quantitative ultrasonic measurements of the human carotid artery (1997) (52)
- Segmentation of overlapping cervical cells: A variational method with star-shape prior (2015) (52)
- Spinal Crawlers: Deformable Organisms for Spinal Cord Segmentation and Analysis (2006) (52)
- Color lesion boundary detection using live wire (2005) (50)
- ProbExplorer: Uncertainty‐guided Exploration and Editing of Probabilistic Medical Image Segmentation (2010) (50)
- Learning features for streak detection in dermoscopic color images using localized radial flux of principal intensity curvature (2012) (48)
- Fully Convolutional Neural Networks to Detect Clinical Dermoscopic Features (2017) (46)
- The Generalized Log-Ratio Transformation: Learning Shape and Adjacency Priors for Simultaneous Thigh Muscle Segmentation (2015) (44)
- VascuSynth: Vascular Tree Synthesis Software (2011) (44)
- Generalized Sparse Classifiers for Decoding Cognitive States in fMRI (2010) (43)
- Bilateral Maps for Partial Matching (2013) (43)
- Generative adversarial networks to segment skin lesions (2018) (42)
- Contour Correspondence via Ant Colony Optimization (2007) (42)
- Simultaneous Multi-Structure Segmentation and 3D Nonrigid Pose Estimation in Image-Guided Robotic Surgery (2016) (41)
- Melanoma Recognition via Visual Attention (2019) (41)
- Convex multi-region probabilistic segmentation with shape prior in the isometric log-ratio transformation space (2011) (39)
- MATLAB-ITK interface for medical image filtering, segmentation, and registration (2006) (39)
- 3D fascicle orientations in triceps surae. (2013) (39)
- Deep learning for biomedical image reconstruction: a survey (2020) (38)
- VASE: Volume‐Aware Surface Evolution for Surface Reconstruction from Incomplete Point Clouds (2011) (38)
- Simulation of Ground-Truth Validation Data Via Physically- and Statistically-Based Warps (2008) (38)
- Is a Single Energy Functional Sufficient? Adaptive Energy Functionals and Automatic Initialization (2007) (37)
- Vulnerability Analysis of Chest X-Ray Image Classification Against Adversarial Attacks (2018) (36)
- Medial-Based Deformable Models in Nonconvex Shape-Spaces for Medical Image Segmentation (2012) (36)
- Improving Probabilistic Image Registration via Reinforcement Learning and Uncertainty Evaluation (2013) (36)
- Predicting Cancer with a Recurrent Visual Attention Model for Histopathology Images (2018) (36)
- Deformable Spatio-Temporal Shape Models: Extending ASM to 2D+Time (2001) (36)
- Super Resolution Network Analysis Defines the Molecular Architecture of Caveolae and Caveolin-1 Scaffolds (2018) (35)
- A fast and fully-automated deep-learning approach for accurate hemorrhage segmentation and volume quantification in non-contrast whole-head CT (2020) (35)
- Geometry-Based Pectoral Muscle Segmentation From MLO Mammogram Views (2017) (35)
- Tongue contour tracking in dynamic ultrasound via higher-order MRFs and efficient fusion moves (2012) (35)
- <formula formulatype="inline"><tex Notation="TeX">$n$</tex> </formula>-SIFT: <formula formulatype="inline"><tex Notation="TeX">$n$</tex> </formula>-Dimensional Scale Invariant Feature Transform (2007) (34)
- Hair Enhancement in Dermoscopic Images Using Dual-Channel Quaternion Tubularness Filters and MRF-Based Multilabel Optimization (2014) (34)
- InfoMask: Masked Variational Latent Representation to Localize Chest Disease (2019) (33)
- Generalizable Feature Learning in the Presence of Data Bias and Domain Class Imbalance with Application to Skin Lesion Classification (2019) (33)
- Probabilistic Multi-shape Segmentation of Knee Extensor and Flexor Muscles (2011) (32)
- Connectome priors in deep neural networks to predict autism (2018) (31)
- Reliability-Driven, Spatially-Adaptive Regularization for Deformable Registration (2010) (31)
- Simultaneous Segmentation, Kinetic Parameter Estimation, and Uncertainty Visualization of Dynamic PET Images (2007) (31)
- Hands-free interactive image segmentation using eyegaze (2009) (30)
- Mask2Lesion: Mask-Constrained Adversarial Skin Lesion Image Synthesis (2019) (30)
- A structured latent model for ovarian carcinoma subtyping from histopathology slides (2017) (30)
- A Kernelized Manifold Mapping to Diminish the Effect of Adversarial Perturbations (2019) (28)
- Skin lesion tracking using structured graphical models (2016) (28)
- A New Preprocessing Filter for Digital Mammograms (2010) (28)
- Flame front tracking by laser induced fluorescence spectroscopy and advanced image analysis. (2001) (28)
- Scanner Invariant Multiple Sclerosis Lesion Segmentation from MRI (2019) (28)
- Medial Profiles for Modeling Deformation and Statistical Analysis of Shape and their Use in Medical Image Segmentation (2004) (27)
- Active Shape Models, Modeling Shape Variations and Gray Level Information and an Application to Image Search and Classification (1998) (27)
- Multi-loss convolutional networks for gland analysis in microscopy (2016) (27)
- Pareto-optimal multi-objective dimensionality reduction deep auto-encoder for mammography classification (2017) (27)
- Perception-Based Visualization of Manifold-Valued Medical Images Using Distance-Preserving Dimensionality Reduction (2011) (27)
- Spinal Cord Segmentation for Volume Estimation in Healthy and Multiple Sclerosis Subjects Using Crawlers and Minimal Paths (2011) (27)
- Super-resolution modularity analysis shows polyhedral caveolin-1 oligomers combine to form scaffolds and caveolae (2019) (26)
- Adaptive Regularization for Image Segmentation Using Local Image Curvature Cues (2010) (26)
- Uncertainty-Encoded Augmented Reality for Robot-Assisted Partial Nephrectomy: A Phantom Study (2013) (26)
- Quaternion Color Curvature (2008) (26)
- Illumination-based Transformations Improve Skin Lesion Segmentation in Dermoscopic Images (2020) (25)
- Prediction of Motor Function in Very Preterm Infants Using Connectome Features and Local Synthetic Instances (2015) (25)
- A graph-based approach to skin mole matching incorporating template-normalized coordinates (2009) (25)
- Artificial intelligence in glioma imaging: challenges and advances (2019) (25)
- Probabilistic Multi-Shape Representation Using an Isometric Log-Ratio Mapping (2010) (24)
- Kinetic Modeling Based Probabilistic Segmentation for Molecular Images (2008) (23)
- Vessel scale-selection using MRF optimization (2010) (23)
- Automatic segmentation of occluded vasculature via pulsatile motion analysis in endoscopic robot-assisted partial nephrectomy video (2015) (23)
- Auto Localization and Segmentation of Occluded Vessels in Robot-Assisted Partial Nephrectomy (2014) (22)
- Genetic algorithm driven statistically deformed models for medical image segmentation (2006) (22)
- Multi‐site quality and variability analysis of 3D FDG PET segmentations based on phantom and clinical image data (2017) (22)
- MRI-based 3D shape analysis of thigh muscles patients with chronic obstructive pulmonary disease versus healthy adults. (2011) (22)
- Globally optimal spinal cord segmentation using a minimal path in high dimensions (2013) (22)
- 3D shape analysis of the supraspinatus muscle: a clinical study of the relationship between shape and pathology. (2007) (22)
- Vascular bifurcation detection in scale-space (2012) (22)
- Review Active Shape Models - Part II: Image Search and Classification (1998) (22)
- Review - Active Shape Models - Part I: Modeling Shape and Gray Level Variation (1998) (22)
- Learning-to-augment strategy using noisy and denoised data: Improving generalizability of deep CNN for the detection of COVID-19 in X-ray images (2021) (22)
- Deep Learning Based Image Reconstruction for Diffuse Optical Tomography (2018) (22)
- Random Walks with Efficient Search and Contextually Adapted Image Similarity for Deformable Registration (2013) (22)
- Uncertainty Driven Multi-loss Fully Convolutional Networks for Histopathology (2017) (21)
- Anatomically Guided Registration of Whole Body Mouse MR Images (2003) (21)
- Local Optimization Based Segmentation of Spatially-Recurring, Multi-Region Objects With Part Configuration Constraints (2014) (21)
- Segmentation and Measurement of Chronic Wounds for Bioprinting (2018) (21)
- Segmentation-Free Kidney Localization and Volume Estimation Using Aggregated Orthogonal Decision CNNs (2017) (20)
- Optimal Weights for Convex Functionals in Medical Image Segmentation (2009) (20)
- Complexity and accuracy of image registration methods in SPECT-guided radiation therapy (2010) (20)
- Statistically constrained snake deformations (2000) (19)
- 3D curvature of muscle fascicles in triceps surae. (2014) (19)
- Human Limb Delineation and Joint Position Recovery Using Localized Boundary Models (2007) (19)
- Bifurcation detection in 3D vascular images using novel features and random forest (2014) (19)
- Examining visible articulatory features in clear and plain speech (2015) (19)
- Graph-based tracking of the tongue contour in ultrasound sequences with adaptive temporal regularization (2010) (18)
- Modeling prior shape and appearance knowledge in watershed segmentation (2005) (18)
- Physics-based deformable organisms for medical image analysis (2005) (18)
- Efficient Multi-organ Segmentation in Multi-view Endoscopic Videos Using Pre-operative Priors (2014) (18)
- Endoscopic scene labelling and augmentation using intraoperative pulsatile motion and colour appearance cues with preoperative anatomical priors (2016) (18)
- Guidelines and evaluation for clinical explainable AI on medical image analysis (2022) (18)
- Co-registration of Bone CT and SPECT Images Using Mutual Information (2006) (18)
- Automatic Globally-Optimal Pictorial Structures with Random Decision Forest Based Likelihoods For Cephalometric X-Ray Landmark Detection (2014) (18)
- Towards Intelligent Deformable Models for Medical Image Analysis (2001) (17)
- Deep auto-context fully convolutional neural network for skin lesion segmentation (2018) (17)
- Automatic localization of normal active organs in 3D PET scans (2018) (16)
- Physics-based shape deformations for medical image analysis (2003) (16)
- SMRFI: Shape matching via registration of vector-valued feature images (2008) (16)
- Towards multi-modal image-guided tumour identification in robot-assisted partial nephrectomy (2014) (16)
- The Isometric Log-Ratio Transform for Probabilistic Multi-Label Anatomical Shape Representation (2014) (16)
- Deep semantic segmentation of natural and medical images: a review (2020) (16)
- Tracking contrast in echocardiography by a combined snake and optical flow technique (2000) (16)
- Super resolution microscopy and deep learning identify Zika virus reorganization of the endoplasmic reticulum (2020) (16)
- Spatial Normalization of Human Back Images for Dermatological Studies (2014) (15)
- Uncertainty-Based Feature Learning for Skin Lesion Matching Using a High Order MRF Optimization Framework (2012) (15)
- Prediction of Brain Network Age and Factors of Delayed Maturation in Very Preterm Infants (2017) (15)
- Locally-adaptive similarity metric for deformable medical image registration (2012) (15)
- Segmentation of complex objects with non-spherical topologies from volumetric medical images using 3D livewire (2007) (15)
- Active Shape Models-Part I : Modeling Shape and Gray Level Variations (1998) (14)
- Modeling Brain Activation in fMRI Using Group MRF (2012) (14)
- Segmentation of Cells with Partial Occlusion and Part Configuration Constraint Using Evolutionary Computation (2013) (14)
- Limited-Angle Diffuse Optical Tomography Image Reconstruction Using Deep Learning (2019) (14)
- Multi-Region Probabilistic Dice Similarity Coefficient using the Aitchison Distance and Bipartite Graph Matching (2015) (14)
- Bounded Labeling Function for Global Segmentation of Multi-part Objects with Geometric Constraints (2013) (14)
- QUANTIFICATION AND VISUALIZATION OF LOCALIZED AND INTUITIVE SHAPE VARIABILITY USING A NOVEL MEDIAL-BASED SHAPE REPRESENTATION (2007) (14)
- Deformation analysis of Hoffa's fat pad from CT images of knee flexion and extension (2005) (14)
- Testing the Ability of Convolutional Neural Networks to Learn Radiomic Features (2020) (14)
- Adaptive Contextual Energy Parameterization for Automated Image Segmentation (2009) (13)
- Automatic Diagnosis of Ovarian Carcinomas via Sparse Multiresolution Tissue Representation (2015) (13)
- D-LEMA: Deep Learning Ensembles from Multiple Annotations - Application to Skin Lesion Segmentation (2020) (13)
- Computer-vision analysis reveals facial movements made during Mandarin tone production align with pitch trajectories (2019) (13)
- Predicting the clinical management of skin lesions using deep learning (2020) (13)
- Level Set Curve Matching and Particle Image Velocimetry for Resolving Chemistry and Turbulence Interactions in Propagating Flames (2003) (13)
- Group MRF for fMRI activation detection (2010) (13)
- Matthews Correlation Coefficient Loss For Deep Convolutional Networks: Application To Skin Lesion Segmentation (2020) (13)
- Cascaded Regression Neural Nets for Kidney Localization and Segmentation-free Volume Estimation (2021) (12)
- Development of NEMA-based Software for Gamma Camera Quality Control (2007) (12)
- Caveolae and scaffold detection from single molecule localization microscopy data using deep learning (2019) (12)
- Segmentation-Free Estimation of Kidney Volumes in CT with Dual Regression Forests (2016) (12)
- Segmentation-free direct tumor volume and metabolic activity estimation from PET scans (2017) (12)
- Select, Attend, and Transfer: Light, Learnable Skip Connections (2018) (12)
- Flame front matching and tracking in PLIF images using geodesic paths and level sets (2001) (11)
- Bridging AI Developers and End Users: an End-User-Centred Explainable AI Taxonomy and Visual Vocabularies (2019) (11)
- Weakly supervised fully convolutional network for PET lesion segmentation (2019) (11)
- K-confidence: Assessing uncertainty in tractography using K optimal paths (2013) (11)
- MATITK: EXTENDING MATLAB WITH ITK (2005) (11)
- Motion estimation for functional medical imaging studies using a stereo video head pose tracking system (2008) (10)
- Snake Deformations Based on Optical Flow Forces for Contrast Agent Tracking in Echocardiography (2000) (10)
- Noninvasive Determination of Gene Mutations in Clear Cell Renal Cell Carcinoma Using Multiple Instance Decisions Aggregated CNN (2018) (10)
- Longitudinal, Regional and Deformation-Specific Corpus Callosum Shape Analysis for Multiple Sclerosis (2007) (10)
- A Machine Learning Approach to Tongue Motion Analysis in 2D Ultrasound Image Sequences (2011) (10)
- Multi-region competitive tractography via graph-based random walks (2012) (10)
- 3D Bicipital Groove Shape Analysis and Relationship to Tendopathy (2008) (10)
- Medial-based Deformable Models in Non-convex Shape-spaces for Medical Image Segmentation using Genetic Algorithms (2011) (10)
- EUCA: A Practical Prototyping Framework towards End-User-Centered Explainable Artificial Intelligence (2021) (10)
- ImHistNet: Learnable Image Histogram Based DNN with Application to Noninvasive Determination of Carcinoma Grades in CT Scans (2019) (10)
- STEAM — Statistical Template Estimation for Abnormality Mapping: A personalized DTI analysis technique with applications to the screening of preterm infants (2016) (10)
- Learning Fourier descriptors for computer-aided diagnosis of the supraspinatus. (2010) (10)
- Deformable Organisms: An Artificial Life Framework for Automated Medical Image Analysis (2009) (10)
- Learnable image histograms-based deep radiomics for renal cell carcinoma grading and staging (2021) (10)
- Biomechanical kidney model for predicting tumor displacement in the presence of external pressure load (2014) (9)
- Association of bladder dose with late urinary side effects in cervical cancer high-dose-rate brachytherapy. (2017) (9)
- Clinically-inspired automatic classification of ovarian carcinoma subtypes (2016) (9)
- Recovery of Dynamic PET Regions via Simultaneous Segmentation and Deconvolution (2008) (9)
- One Map Does Not Fit All: Evaluating Saliency Map Explanation on Multi-Modal Medical Images (2021) (9)
- GMAT : The Groupwise Medial Axis Transform for Fuzzy Skeletonization and Intelligent Pruning (2008) (9)
- Augmenting Auto-context with Global Geometric Features for Spinal Cord Segmentation (2013) (9)
- Segmentation-based regularization of dynamic SPECT reconstruction (2009) (9)
- Bladder accumulated dose in image-guided high-dose-rate brachytherapy for locally advanced cervical cancer and its relation to urinary toxicity (2016) (9)
- Visual Diagnosis of Dermatological Disorders: Human and Machine Performance (2019) (8)
- Deep Learning Models for Digital Pathology (2019) (8)
- Topology Preservation and Anatomical Feasibility in Random Walker Image Registration (2014) (8)
- Retinal Image Classification via Vasculature-Guided Sequential Attention (2019) (8)
- Scale Invariant Feature Transform for n-Dimensional Images (n-SIFT) (2007) (8)
- Validation of mutual information-based registration of CT and bone SPECT images in dual-isotope studies (2008) (8)
- Detecting Structure in Diffusion Tensor MR Images (2011) (8)
- Fully Convolutional Networks to Detect Clinical Dermoscopic Features (2017) (8)
- Consistent Information Content Estimation for Diffusion Tensor MR Images (2011) (8)
- Renal Cell Carcinoma Staging with Learnable Image Histogram-Based Deep Neural Network (2019) (8)
- Emerging neuroimaging technologies: Towards future personalized diagnostics, prognosis, targeted intervention and ethical challenges. (Chapter ?) (2016) (8)
- Medial Profiles for Modeling and Statistical Analysis of Shape (2003) (7)
- Leveraging Tree Statistics for Extracting Anatomical Trees from 3D Medical Images (2017) (7)
- Predictive connectome subnetwork extraction with anatomical and connectivity priors (2019) (7)
- Fast GPU Fitting of Kinetic Models for Dynamic PET (2010) (7)
- Exact integration of diffusion orientation distribution functions for graph-based diffusion MRI analysis (2011) (7)
- Statistical Shape Modeling Using MDL Incorporating Shape, Appearance, and Expert Knowledge (2007) (7)
- Predictive Subnetwork Extraction with Structural Priors for Infant Connectomes (2016) (7)
- Uncertainty in Tractography via Tract Confidence Regions (2013) (7)
- Deformable Spatio-Temporal Shape Modeling (1999) (7)
- Improved Inference via Deep Input Transfer (2019) (7)
- Medical Image Registration: A Review (2017) (7)
- Random walker image registration with cost aggregation (2014) (7)
- DTMRI Segmentation using DT-Snakes and DT-Livewire (2006) (7)
- Novel Decomposition of Tensor Distance into Shape and Orientation Distances (2009) (6)
- Graph Geodesics to Find Progressively Similar Skin Lesion Images (2017) (6)
- Physically And Statistically Based Deformable Models For Medical Image Analysis (2007) (6)
- Identification of caveolin-1 domain signatures via machine learning and graphlet analysis of single-molecule super-resolution data (2019) (6)
- Super-resolution modularity analysis shows polyhedral caveolin-1 oligomers combine to form scaffolds and caveolae (2018) (6)
- ERGO: Efficient Recurrent Graph Optimized Emitter Density Estimation in Single Molecule Localization Microscopy (2019) (6)
- Controlled Shape Deformations via Medial Profiles (2001) (6)
- Multi-angle deformation analysis of Hoffa's fat pad (2006) (6)
- Bilateral Filtering of Diffusion Tensor MR Images (2006) (6)
- Collage CNN for Renal Cell Carcinoma Detection from CT (2017) (5)
- Brain Connectivity Mapping and Analysis using Diffusion MRI (Chapter 19) (2017) (5)
- I-DO: A Deformable Organisms framework for ITK (2006) (5)
- Evaluating geometrical accuracy of image registration methods in SPECT guided radiation therapy (5)
- Culprit-Prune-Net: Efficient Continual Sequential Multi-domain Learning with Application to Skin Lesion Classification (2021) (5)
- WhiteNNer-Blind Image Denoising via Noise Whiteness Priors (2019) (5)
- Deformable Organisms For Medical Image Analysis (2007) (5)
- Multisite Technical and Clinical Performance Evaluation of Quantitative Imaging Biomarkers from 3D FDG PET Segmentations of Head and Neck Cancer Images (2020) (5)
- Evolutionary Deformable Models for Medical Image Segmentation: A Genetic Algorithm Approach to Optimizing Learned, Intuitive, and Localized Medial-based Shape Deformation (2010) (5)
- Fast random walker image registration using precomputation (2014) (5)
- Co-registration of CT-SPECT images for tumor localization and dosimetry (2006) (4)
- MaskTune: Mitigating Spurious Correlations by Forcing to Explore (2022) (4)
- Globally-Optimal Anatomical Tree Extraction from 3D Medical Images Using Pictorial Structures and Minimal Paths (2017) (4)
- Segmentation, Registration, and Deformation Analysis of 3D MR Images of Mice (2003) (4)
- 3D Shape Analysis of the Knee Extensor and Flexor Muscles in Patients with COPD using Mesh Projection-based Features (2011) (4)
- Local volume changes of the corpus callosum from 3D MR images of wildtype and knockout mouse brains (2003) (4)
- Barycentric Label Space (2009) (4)
- Propagation of registration uncertainty during multi-fraction cervical cancer brachytherapy (2017) (4)
- Can Deep Learning Relax Endomicroscopy Hardware Miniaturization Requirements? (2018) (4)
- Processing, Segmentation, Registration, and Deformation Analysis of 3D MR Images of Mice. (2003) (4)
- Extraction of the Plane of Minimal Cross-Sectional Area of the Corpus Callosum Using Template-Driven Segmentation (2010) (4)
- Intelligent Deformable Organisms : An Artificial Life Approach to Medical Image Analysis (2001) (4)
- Automatic Labelling of Tumourous Frames in Free-Hand Laparoscopic Ultrasound Video (2014) (4)
- Automatic Vessel Segmentation from Pulsatile Radial Distension (2015) (4)
- Quantitative evaluation on the accuracy of image registration methods in SPECT guided radiation therapy for lung cancer patients (2009) (4)
- Image denoising in the deep learning era (2022) (4)
- Medical Image Segmentation: Energy Minimization and Deformable Models (Chapter 23) (2013) (4)
- A Cross-Sectional Piecewise Constant Model for Segmenting Highly Curved Fiber Tracts in Diffusion MR Images (2013) (4)
- Novel Morphological and Appearance Features for Predicting Physical Disability from MR Images in Multiple Sclerosis Patients (2014) (4)
- Validation of non-rigid point-set registration methods using a porcine bladder pelvic phantom (2016) (4)
- Tree-LSTM: Using LSTM to Encode Memory in Anatomical Tree Prediction from 3D Images (2019) (4)
- Tumor Lesion Segmentation from 3D PET Using a Machine Learning Driven Active Surface (2016) (4)
- Skin3D: Detection and longitudinal tracking of pigmented skin lesions in 3D total-body textured meshes (2021) (4)
- Random Walker Based Estimation and Spatial Analysis of Probabilistic fMRI Activation Maps (2009) (4)
- 3D surface parameterization using manifold learning for medial shape representation (2007) (3)
- Decision Forests with Spatio-Temporal Features for Graph-Based Tumor Segmentation in 4D Lung CT (2013) (3)
- Dual-isotope Acquisition for CT–SPECT Registration of Infection Studies (2010) (3)
- 3 D Shape Analysis of the Supraspinatus Muscle (2006) (3)
- Corpus Callosum Segmentation in MS Studies Using Normal Atlases and Optimal Hybridization of Extrinsic and Intrinsic Image Cues (2015) (3)
- Multi-label MRF Optimization via a Least Squares s - t Cut (2009) (3)
- Evaluating the Clinical Utility of Artificial Intelligence Assistance and its Explanation on Glioma Grading Task (2022) (3)
- Detecting Brain Activation in fMRI Using Group Random Walker (2010) (3)
- 3D Surface Reconstruction of Organs Using Patient-Specific Shape Priors in Robot-Assisted Laparoscopic Surgery (2013) (3)
- Computational and Visualization Techniques for Understanding the Shape Variations of the Bicipital Groove of the Proximal Humerus (2006) (3)
- Iterative segmentation and motion correction for dynamic PET images based on radioactive tracer kinetics (2012) (3)
- FairDisCo: Fairer AI in Dermatology via Disentanglement Contrastive Learning (2022) (3)
- Diffusion MRI for Brain Connectivity Mapping and Analysis (Chapter 7) (2018) (3)
- Visualizing Diffusion Tensor Dissimilarity using an ICA Based Perceptual Colour Metric (2007) (3)
- 3D shape description of the bicipital groove of the proximal humerus (2006) (3)
- Tensor dissimilarity based adaptive seeding algorithm for DT-MRI visualization with streamtubes (2007) (3)
- SwifTree: Interactive Extraction of 3D Trees Supporting Gaming and Crowdsourcing (2017) (3)
- DTI-DeformIt: Generating ground-truth validation data for diffusion tensor image analysis tasks (2014) (3)
- Special issue on machine learning in medical imaging (2019) (3)
- Joint Gender-, Tone-, Vowel- Classification Via Novel Hierarchical Classification for Annotation of Monosyllabic Mandarin Word Tokens (2018) (3)
- Applying Artificial Intelligence to Glioma Imaging: Advances and Challenges (2019) (2)
- Enhanced Direct Joint Attenuation and Scatter Correction of Whole-Body PET Images via Context-Aware Deep Networks (2022) (2)
- Constraining Contour Deformations Using Statistical A Priori Knowledge of Shape Without Requiring Point-to-Point Correspondence (2000) (2)
- NMQC: A NEMA-compliant software application for gamma camera quality control (2006) (2)
- A Survey on Deep Learning for Skin Lesion Segmentation (2022) (2)
- CIRCLe: Color Invariant Representation Learning for Unbiased Classification of Skin Lesions (2022) (2)
- Image-Based Motion Detection: Using the Concept of Weighted Directional Descriptors (2010) (2)
- Effects of Mid-Sagittal Plane Perturbation and Image Interpolation on Corpus Callosum Area Calculation (2006) (2)
- ITK on the iOS (2010) (2)
- A novel automated approach to rapid and precise in vivo measurement of hair morphometrics using a smartphone (2021) (2)
- Diffusion tensor image processing using biquaternions (2012) (2)
- Modelling and extraction of pulsatile radial distension and compression motion for automatic vessel segmentation from video (2017) (2)
- Arterial Mechanical Motion Estimation Based on a Semi-Rigid Body Deformation Approach (2014) (2)
- TreeNet: Multi-loss Deep Learning Network to Predict Branch Direction for Extracting 3D Anatomical Trees (2018) (2)
- MATITK: MATLAB-ITK Interface for Medical Image Processing (2005) (2)
- Image Content-Based Navigation of Skin Conditions (2015) (2)
- Deep Multimodal Guidance for Medical Image Classification (2022) (2)
- Multitask Deep Learning Reconstruction and Localization of Lesions in Limited Angle Diffuse Optical Tomography (2020) (2)
- The Optimizability-Fidelty Trade-Off in Image Analysis (2011) (2)
- 3D Shape Description of the Bicipital Groove: Correlation to Pathology (2006) (2)
- Skin Mole Matching Incorporating Template-Normalized Coordinates (2009) (2)
- Detection and Longitudinal Tracking of Pigmented Skin Lesions in 3D Total-Body Skin Textured Meshes (2021) (2)
- Medical Image Segmentation: Energy Minimization and Deformable Models (2017) (2)
- A Method for Modeling and Segmentation of Spatio-Temporal Shapes (1999) (1)
- Random walker image registration with inverse consistency (2015) (1)
- Bifurcation Localization in 3D Images via Evolutionary Geometric Deformable Templates (2017) (1)
- Linking production and perception of clear speech (2018) (1)
- A Level-Set based Segmentation of tumour lesions in PET images (2016) (1)
- Sub-cellular network analysis of ryanodine receptor positioning in control and phosphorylated states (2016) (1)
- Automated Counting of Hair Using an iPhone (1)
- Artificial Life Models for Medical Image Analysis - 2D and 3D ITK-Based Deformable Organisms (2005) (1)
- Parallel MR Imaging for Mouse Phenotyping (2002) (1)
- SPECHT: Self-tuning Plausibility based object detection Enables quantification of Conflict in Heterogeneous multi-scale microscopy (2020) (1)
- Signed Input Regularization (2019) (1)
- Active deep learning from a noisy teacher for semi-supervised 3D image segmentation: Application to COVID-19 pneumonia infection in CT (2022) (1)
- Streak-Detection in Dermoscopic Color Images using Localized Radial Flux of Principal Intensity Curvature (Chapter 7) (2015) (1)
- ITK Image IO interface with Apple iOS (2010) (1)
- ADFAC: Automatic detection of facial articulatory features (2020) (1)
- 3D segmentation of mouse organs from MR images using deformable simplex mesh models (2003) (1)
- Co-registration and fusion of CT and SPECT images using mutual information (2003) (1)
- surae muscles during contraction Architectural and functional features of human triceps (2015) (1)
- Image Super Resolution via Bilinear Pooling: Application to Confocal Endomicroscopy (2019) (1)
- Examining visible articulatory features in clear and conversational speech (2015) (1)
- BoosterNet: Improving Domain Generalization of Deep Neural Nets using Culpability-Ranked Features (2022) (1)
- Patch-based Non-Local Bayesian Networks for Blind Confocal Microscopy Denoising (2020) (1)
- Effects of mid sagittal plane selection on corpus callosal area (2006) (1)
- Distinguishing Biological and Non-Biological Networks in Single Molecule Localization Super Resolution Microscopy (2017) (1)
- - SIFT :-Dimensional Scale Invariant Feature Transform (2009) (1)
- MRI-based Three dimensional shape analysis of thigh muscles: people with Chronic Obstructive Pulmonary Disease versus healthy older adults (2011) (0)
- Airway Segmentation using Crawlers and Optimal Paths (2009) (0)
- 11 PHYSICALLY AND STATISTICALLY BASED DEFORMABLE MODELS FOR MEDICAL IMAGE ANALYSIS (2007) (0)
- Computer-vision analysis shows different facial movements for the production of different Mandarin tones (2018) (0)
- Modelling the Healthy Premature Infant Brain (2013) (0)
- Spatial dispersion of lesions as a surrogate biomarker for disability in multiple sclerosis (2012) (0)
- Diffusion Properties of Cortico-Striatal White Matter Tractography As Sensistive Markers of Parkinson ' s Disease (2008) (0)
- Deformable Surface Models for Segmenting 3D MR Images of Mice (2002) (0)
- Filtering, Segmenting, and Quantifying Caveolin-1 Protein Clusters in 3D Super-Resolution Microscopy via Machine-Learning and Network Analysis (2017) (0)
- Probabilistic multi-label representations for anatomical statistical shape analysis (2010) (0)
- NMQC: A NEMA-compliant software for gamma camera quality control (2006) (0)
- Workshop on Mathematical Methods for Medical Image Analysis ( MMMIA ) (2008) (0)
- Optimal Weights in Convex Functionals : Taking the Guesswork Out of Segmentation (2009) (0)
- Perception-based Visualization of High-Dimensional Medical Images Using Distance Preserving Dimensionality Reduction (2009) (0)
- マウスの3D MR画像の分割,見当合わせと変形解析(原標題は英語) (2003) (0)
- [Time Varying Shape, Spatio-Temporal Models] Deformable Spatio-Temporal Shape Models (2002) (0)
- Can Bladder Late Complications Be Predicted in Cervical Cancer HDR Brachytherapy (2016) (0)
- JMI 2015 List of Reviewers. (2016) (0)
- Back Atlas for Tracking Pigmented Skin Lesions (2010) (0)
- Increasing Accuracy of Mutual Information Based Registration of Tumor SPECT and CT Images with Dual-isotope Acquisition (2008) (0)
- 3D Registration of MR Mouse Images (2002) (0)
- Mouth2audio: Intelligible Audio Synthesis from Videos with Distinctive Vowel Articulation (2022) (0)
- A Computer Vision Tracking System for Pigmented Skin Lesions (0)
- Super-resolution analysis of Caveolae and Cav1 scaffolds in Prostate Cancer Cells (2015) (0)
- AECNN: Adversarial and Enhanced Convolutional Neural Networks (2021) (0)
- of human skeletal muscle Quantitative diffusion tensor MRI-based fiber tracking (2015) (0)
- Detecting Streaks from Dermoscopic Images of Pigmented Skin Lesions (0)
- Radial Basis Feature Transformation to Arm CNNs Against Adversarial Attacks (2018) (0)
- Medical Image Analysis with ITK on Apple iOS (2011) (0)
- Multi-Sample ζ-mixup: Richer, More Realistic Synthetic Samples from a p-Series Interpolant (2022) (0)
- eformable organisms for automatic medical image analysis (2002) (0)
- Automatic Spatially-Adaptive Balancing of Energy Terms for Image Segmentation (2009) (0)
- Interaction zone analysis of CAV1-CAVIN1 in breast cancer cells (0)
- INTEGRATED FUNCTIONAL GENOMICS OF THE MOUSE (2003) (0)
- Plain-to-clear speech video conversion for enhanced intelligibility (2023) (0)
- Anatomical Shape Analysis: Exploring the Relationship between Shape and Pathology (2007) (0)
- Poster — Wed Eve—46: Quantitative Evaluation on the Accuracy of Image Registration Methods in SPECT Guided Radiation Therapy for Lung Cancer Patients (2009) (0)
- Adaptable Precomputation for Random Walker Image Segmentation and Registration (2016) (0)
- D organisms for automatic medical image analysis (2002) (0)
- BrainNetCNN: Artificial Convolutional Neural Networks for Connectomes (2016) (0)
- Current Progress of Imaging Screens at the Mouse Imaging Centre (2003) (0)
- Imaging for Mouse Phenotyping (2003) (0)
- Changes to 3 D muscle fascicle geometry during contraction 1 (2013) (0)
- I Some statistical results : Accuracy in correct matching 299 out of 370 = 80 % Accuracy in detecting appearing moles 241 out of 253 = 95 % Accuracy in detecting vanishing moles (2009) (0)
- Automatic Vessel Segmentation from Pulsatile Radial Distension Alborz (2015) (0)
- Different facial cues for different speech styles in Mandarin tone articulation (2020) (0)
- Skin lesion matching using Jacobian based descriptors for topology preservation (2015) (0)
- 6553 Diffusion Properties of Cortico-Striatal White Matter Tractography As Sensistive Markers of Parkinson ' s Disease (2008) (0)
- Using the Concept of Weighted (2010) (0)
- Discovering Biosignatures of Cav1 Domains: Computational Methods for Super-resolution Microscopy (2016) (0)
- Automated methods for determination of 3D muscle fascicle orientation in human muscle using free hand ultrasound (2011) (0)
- 3d Fascicle Orientations in Triceps Surae 1 Journal of Applied Physiology (accepted Apr. 2013) (2013) (0)
- Enhancing accuracy of symmetric random walker image registration via a novel data-consistency measure (2016) (0)
- PRNI 2011 Conference Committee (2011) (0)
- Towards image-guided, minimally-invasive robotic surgery for partial nephrectomy (2013) (0)
- 3D shape analysis of thigh muscles: people with Chronic Obstructive Pulmonary Disease versus healthy older adults (2011) (0)
- Sci-Thur AM: YIS - 11: Estimation of Bladder-Wall Cumulative Dose in Multi-Fraction Image-Based Gynaecological Brachytherapy Using Deformable Point Set Registration (2014) (0)
- Increasing Accuracy of Mutual Information-Based Registration of Tumor SPECT and CT Images with Dual-isotope Studies (2008) (0)
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