Gordon Luikart
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Computer Science
Gordon Luikart's Degrees
- PhD Computer Science University of California, Berkeley
- Masters Computer Science Stanford University
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(Suggest an Edit or Addition)Gordon Luikart's Published Works
Number of citations in a given year to any of this author's works
Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- Description and power analysis of two tests for detecting recent population bottlenecks from allele frequency data. (1996) (4167)
- Computer note. BOTTLENECK: a computer program for detecting recent reductions in the effective size using allele frequency data (1999) (2806)
- Landscape genetics: combining landscape ecology and population genetics (2003) (2258)
- Conservation and the genetics of populations (2006) (1882)
- Distortion of allele frequency distributions provides a test for recent population bottlenecks. (1998) (1453)
- The power and promise of population genomics: from genotyping to genome typing (2003) (1279)
- New methods employing multilocus genotypes to select or exclude populations as origins of individuals. (1999) (1248)
- Estimating the probability of identity among genotypes in natural populations: cautions and guidelines (2001) (1242)
- Genomics and the future of conservation genetics (2010) (1166)
- LOSITAN: A workbench to detect molecular adaptation based on a Fst-outlier method (2008) (1137)
- Empirical Evaluation of a Test for Identifying Recently Bottlenecked Populations from Allele Frequency Data (1998) (1117)
- Genetic monitoring as a promising tool for conservation and management. (2007) (1083)
- Harnessing the power of RADseq for ecological and evolutionary genomics (2016) (1028)
- SNPs in ecology, evolution and conservation (2004) (972)
- BOTTLENECK : A Computer Program for Detecting Recent Reductions in the Effective Population Size Using Allele Frequency Data (2017) (789)
- The alluring simplicity and complex reality of genetic rescue. (2004) (718)
- Genetic effects of harvest on wild animal populations. (2008) (567)
- Estimation of census and effective population sizes: the increasing usefulness of DNA-based approaches (2010) (538)
- DNA markers reveal the complexity of livestock domestication (2003) (534)
- Multiple maternal origins and weak phylogeographic structure in domestic goats (2001) (514)
- Usefulness of molecular markers for detecting population bottlenecks via monitoring genetic change (1998) (512)
- Genome 10K: a proposal to obtain whole-genome sequence for 10,000 vertebrate species. (2009) (511)
- Quantifying the lag time to detect barriers in landscape genetics (2010) (423)
- Multiple maternal origins of chickens: out of the Asian jungles. (2006) (417)
- Non-invasive genetic sampling and individual identification (1999) (356)
- Next‐generation RAD sequencing identifies thousands of SNPs for assessing hybridization between rainbow and westslope cutthroat trout (2011) (355)
- COMPUTER PROGRAMS: onesamp: a program to estimate effective population size using approximate Bayesian computation (2008) (352)
- Advancing ecological understandings through technological transformations in noninvasive genetics (2009) (345)
- The origin of European cattle: evidence from modern and ancient DNA. (2006) (318)
- RAD Capture (Rapture): Flexible and Efficient Sequence-Based Genotyping (2015) (314)
- Gene-culture coevolution between cattle milk protein genes and human lactase genes (2003) (313)
- Detecting Wildlife Poaching: Identifying the Origin of Individuals with Bayesian Assignment Tests and Multilocus Genotypes (2002) (298)
- Effects of Overlapping Generations on Linkage Disequilibrium Estimates of Effective Population Size (2014) (293)
- Microsatellite DNA and recent statistical methods in wildlife conservation management: applications in Alpine ibex [Capra ibex (ibex)] (2002) (238)
- Invasive hybridization in a threatened species is accelerated by climate change (2014) (225)
- African Origins of the Domestic Donkey (2004) (223)
- Genetic rescue of an insular population of large mammals (2006) (217)
- Measuring individual inbreeding in the age of genomics: marker-based measures are better than pedigrees (2015) (214)
- Hidden Consequences of Living in a Wormy World: Nematode‐Induced Immune Suppression Facilitates Tuberculosis Invasion in African Buffalo (2010) (213)
- Likelihood-based estimation of the effective population size using temporal changes in allele frequencies: a genealogical approach. (2002) (208)
- Infecting epidemiology with genetics: a new frontier in disease ecology. (2009) (204)
- Simple life-history traits explain key effective population size ratios across diverse taxa (2013) (189)
- Zebu cattle are an exclusive legacy of the South Asia neolithic. (2010) (187)
- Genomics advances the study of inbreeding depression in the wild (2016) (185)
- Why replication is important in landscape genetics: American black bear in the Rocky Mountains (2011) (185)
- Genomic patterns of introgression in rainbow and westslope cutthroat trout illuminated by overlapping paired‐end RAD sequencing (2013) (185)
- Genetic diversity and assignment tests among seven French cattle breeds based on microsatellite DNA analysis. (2002) (175)
- Power of 22 microsatellite markers in fluorescent multiplexes for parentage testing in goats (Capra hircus). (1999) (158)
- Habitat loss: ecological, evolutionary and genetic consequences (2000) (154)
- Genomics in Conservation: Case Studies and Bridging the Gap between Data and Application. (2016) (154)
- Estimating effective population size from linkage disequilibrium: severe bias in small samples (2006) (154)
- Review of DNA‐based census and effective population size estimators (1998) (140)
- Divergent mtDNA lineages of goats in an Early Neolithic site, far from the initial domestication areas (2006) (140)
- Estimating the effective number of breeders from heterozygote excess in progeny. (1999) (139)
- Comparative Evaluation of a New Effective Population Size Estimator Based on Approximate Bayesian Computation (2004) (134)
- Recent novel approaches for population genomics data analysis (2014) (128)
- Conservation genomics of natural and managed populations: building a conceptual and practical framework (2016) (127)
- Evolutionary history of the genus Capra (Mammalia, Artiodactyla): discordance between mitochondrial DNA and Y-chromosome phylogenies. (2006) (127)
- Evolution and taxonomy of the wild species of the genus Ovis (Mammalia, Artiodactyla, Bovidae). (2010) (124)
- Low genotyping error rates in wild ungulate faeces sampled in winter (2004) (117)
- Early detection of population declines: high power of genetic monitoring using effective population size estimators (2010) (109)
- Probable causes of increasing brucellosis in free-ranging elk of the Greater Yellowstone Ecosystem. (2010) (107)
- Temporal Changes in Allele Frequencies Provide Estimates of Population Bottleneck Size (1999) (104)
- Exome-wide DNA capture and next generation sequencing in domestic and wild species (2011) (100)
- Candidate gene microsatellite variation is associated with parasitism in wild bighorn sheep (2008) (95)
- Climate change links fate of glaciers and an endemic alpine invertebrate (2011) (92)
- A new individual‐based spatial approach for identifying genetic discontinuities in natural populations (2007) (92)
- Genetic diversity-fitness correlation revealed by microsatellite analyses in European alpine marmots (Marmota marmota) (2006) (85)
- Genomics reveals historic and contemporary transmission dynamics of a bacterial disease among wildlife and livestock (2016) (85)
- Aquatic Landscape Genomics and Environmental Effects on Genetic Variation. (2019) (80)
- Combining genetic and ecological data to assess the conservation status of the endangered Ethiopian walia ibex (2009) (77)
- Importance of a pilot study for non-invasive genetic sampling: genotyping errors and population size estimation in red deer (2006) (76)
- Are Environmental DNA Methods Ready for Aquatic Invasive Species Management? (2020) (76)
- Relationships between migration rates and landscape resistance assessed using individual‐based simulations (2010) (74)
- HETEROZYGOSITY-FITNESS CORRELATIONS REVEALED BY NEUTRAL AND CANDIDATE GENE MARKERS IN ROE DEER FROM A LONG-TERM STUDY (2009) (71)
- High polymorphism in the κ-casein (CSN3) gene from wild and domestic caprine species revealed by DNA sequencing (2004) (71)
- Climate-induced range contraction of a rare alpine aquatic invertebrate (2014) (71)
- Recent advances in conservation and population genomics data analysis (2018) (70)
- RAD sequencing yields a high success rate for westslope cutthroat and rainbow trout species‐diagnostic SNP assays (2012) (68)
- Landscape community genomics: understanding eco-evolutionary processes in complex environments. (2015) (66)
- Multiple estimates of effective population size for monitoring a long‐lived vertebrate: an application to Yellowstone grizzly bears (2015) (66)
- Age‐dependent genetic effects on a secondary sexual trait in male Alpine ibex, Capra ibex (2007) (65)
- Dispersal and selection mediate hybridization between a native and invasive species (2015) (63)
- Whole‐genome resequencing uncovers molecular signatures of natural and sexual selection in wild bighorn sheep (2015) (62)
- Early detection of population fragmentation using linkage disequilibrium estimation of effective population size (2010) (56)
- Trade‐offs and utility of alternative RADseq methods: Reply to Puritz et al. (2014) (54)
- Legacy introductions and climatic variation explain spatiotemporal patterns of invasive hybridization in a native trout (2017) (53)
- Effective number of breeders from sibship reconstruction: empirical evaluations using hatchery steelhead (2016) (53)
- Translating Effects of Inbreeding Depression on Component Vital Rates to Overall Population Growth in Endangered Bighorn Sheep (2011) (51)
- Argali Abundance in the Afghan Pamir Using Capture–Recapture Modeling From Fecal DNA (2010) (51)
- Loss of Genetic Diversity and Increased Subdivision in an Endemic Alpine Stonefly Threatened by Climate Change (2016) (51)
- Landscape Genomics: A Brief Perspective (2010) (51)
- Species identification using a small nuclear gene fragment: application to sympatric wild carnivores from South-western Europe (2010) (49)
- Evaluating the role of inbreeding depression in heterozygosity‐fitness correlations: how useful are tests for identity disequilibrium? (2014) (49)
- Frontiers in identifying conservation units: from neutral markers to adaptive genetic variation (2009) (49)
- Genetic diversity is related to climatic variation and vulnerability in threatened bull trout (2015) (44)
- Climate variables explain neutral and adaptive variation within salmonid metapopulations: the importance of replication in landscape genetics (2016) (43)
- IUCN Red List and the value of integrating genetics (2020) (43)
- DNA Genotyping Suggests that Recent Brucellosis Outbreaks in the Greater Yellowstone Area Originated from Elk (2009) (42)
- A standard set of polymorphic microsatellites for threatened mountain ungulates (Caprini, Artiodactyla) (2004) (41)
- Mitochondrial-DNA Variation and Genetic-Population Structure in Rocky Mountain Bighorn Sheep (Ovis canadensis canadensis) (1996) (41)
- Using genetics to estimate the size of wild populations: many methods, much potential, uncertain utility (1999) (41)
- Phylogeography and origin of Indian domestic cattle (2005) (40)
- Improved detection of rare, endangered and invasive trout in using a new large‐volume sampling method for eDNA capture (2019) (39)
- Genomics and introgression: discovery and mapping of thousands of species-diagnostic SNPs using RAD sequencing. (2015) (39)
- A social–ecological perspective for riverscape management in the Columbia River Basin (2018) (38)
- Combining demographic and genetic factors to assess population vulnerability in stream species. (2014) (38)
- Population Genomics: Advancing Understanding of Nature (2018) (37)
- Vive la résistance: genome-wide selection against introduced alleles in invasive hybrid zones (2016) (36)
- Identification of landscape features influencing gene flow: How useful are habitat selection models? (2016) (35)
- Low Genotyping Error Rates and Noninvasive Sampling in Bighorn Sheep (2008) (34)
- Signatures of polygenic adaptation associated with climate across the range of a threatened fish species with high genetic connectivity (2017) (34)
- Opportunities and challenges of macrogenetic studies (2021) (34)
- Genetic Bottlenecks Resulting from Restoration Efforts: The Case of Bighorn Sheep in Badlands National Park (2000) (32)
- Population Genomics Provides Key Insights in Ecology and Evolution (2018) (31)
- Accounting for adaptive capacity and uncertainty in assessments of species’ climate‐change vulnerability (2017) (29)
- Assessment of population structure by single nucleotide polymorphisms (SNPs) in goat breeds. (2006) (29)
- Demographic modelling reveals a history of divergence with gene flow for a glacially tied stonefly in a changing post‐Pleistocene landscape (2018) (28)
- Development of microsatellite multiplexes for wild goats using primers designed from domestic Bovidae (2001) (28)
- Risk and efficacy of human‐enabled interspecific hybridization for climate‐change adaptation: response to Hamilton and Miller (2016) (2016) (27)
- Twenty polymorphic microsatellites in two of North Africa's most threatened ungulates: Gazella dorcas and Ammotragus lervia (Bovidae; Artiodactyla) (2004) (26)
- The genetic architecture of fitness drives population viability during rapid environmental change (2019) (25)
- Development and evaluation of 200 novel SNP assays for population genetic studies of westslope cutthroat trout and genetic identification of related taxa (2012) (25)
- Thirty‐four polymorphic microsatellites for European roe deer (2003) (25)
- High connectivity among argali sheep from Afghanistan and adjacent countries: Inferences from neutral and candidate gene microsatellites (2011) (24)
- SNP discovery in candidate adaptive genes using exon capture in a free‐ranging alpine ungulate (2016) (23)
- Microsatellite diversity of the Nordic type of goats in relation to breed conservation: how relevant is pure ancestry? (2017) (23)
- Increased eDNA detection sensitivity using a novel high‐volume water sampling method (2020) (23)
- Isolation and characterization of microsatellites in European alpine marmots (Marmota marmota) (2003) (23)
- Characterization of microsatellite loci in the endangered long‐footed potoroo Potorous longipes (1997) (23)
- Applications of Genetic Data to Improve Management and Conservation of River Fishes and Their Habitats (2016) (22)
- Evaluating the outcomes of genetic rescue attempts (2020) (20)
- An ecological perspective on Brucella abortus in the western United States. (2013) (20)
- CDFISH: an individual-based, spatially-explicit, landscape genetics simulator for aquatic species in complex riverscapes (2012) (19)
- Macrogenetic studies must not ignore limitations of genetic markers and scale. (2020) (18)
- Conservation and the Genomics of Populations (2022) (18)
- Lack of sex-biased dispersal promotes fine-scale genetic structure in alpine ungulates (2014) (18)
- Assessing the origin and diffusion of domestic goats using ancient DNA (2005) (15)
- Development and evaluation of a selective medium for Brucella suis. (2012) (14)
- Detecting population declines via monitoring the effective number of breeders (Nb) (2020) (14)
- Evidence for adaptive introgression of exons across a hybrid swarm in deer (2019) (12)
- Short communication: new alleles of the bovine kappa-casein gene revealed by resequencing and haplotype inference analysis. (2008) (12)
- Candidate adaptive genes associated with lineage divergence: identifying SNPs via next‐generation targeted resequencing in mule deer (Odocoileus hemionus) (2016) (12)
- Assessments of species’ vulnerability to climate change: from pseudo to science (2016) (12)
- YERSINIA ENTEROCOLITICA: AN UNLIKELY CAUSE OF POSITIVE BRUCELLOSIS TESTS IN GREATER YELLOWSTONE ECOSYSTEM BISON (BISON BISON) (2012) (11)
- Signatures of natural and unnatural selection: evidence from an immune system gene in African buffalo (2015) (11)
- Predicting the evolutionary effects of hunting requires an understanding of genetics (2018) (10)
- Discovery of 20,000 RAD–SNPs and development of a 52-SNP array for monitoring river otters (2016) (10)
- Detecting and quantifying introgression in hybridized populations: simplifying assumptions yield overconfidence and uncertainty (2016) (10)
- Limitations to estimating bacterial cross-species transmission using genetic and genomic markers: inferences from simulation modeling (2014) (9)
- Estimating Bighorn Sheep (Ovis canadensis) Abundance Using Noninvasive Sampling at a Mineral Lick within a National Park Wilderness Area (2015) (9)
- Natural resistance to worms exacerbates bovine tuberculosis severity independently of worm coinfection (2020) (9)
- A review of invasive species reporting apps for citizen science and opportunities for innovation (2022) (9)
- "HOOF-Print" genotyping and haplotype inference discriminates among Brucella spp. isolates from a small spatial scale. (2009) (9)
- Assessing thermal adaptation using family‐based association and FST outlier tests in a threatened trout species (2019) (9)
- Lessons for conservation management: Monitoring temporal changes in genetic diversity of Cape mountain zebra (Equus zebra zebra) (2019) (8)
- Remarkable anoxia tolerance by stoneflies from a floodplain aquifer. (2020) (7)
- Impacts of modern molecular genetic techniques on conservation biology (2007) (7)
- MODELER4SIMCOAL2: A user-friendly, extensible modeler of demography and linked loci for coalescent simulations (2007) (7)
- Conserving genomic variability in large mammals: Effect of population fluctuations and variance in male reproductive success on variability in Yellowstone bison (2012) (7)
- Genetic status and conservation of Westslope Cutthroat Trout in Glacier National Park (2016) (6)
- A chromosome‐anchored genome assembly for Lake Trout (Salvelinus namaycush) (2021) (6)
- Title: Trade-offs and utility of alternative RADseq methods (2014) (6)
- New methods for obtaining and analyzing genetic data from free-ranging carnivores (2001) (4)
- Testing a Generalizable Machine Learning Workflow for Aquatic Invasive Species on Rainbow Trout (Oncorhynchus mykiss) in Northwest Montana (2021) (4)
- Hybridization alters growth and migratory life‐history expression of native trout (2020) (4)
- Big data in conservation genomics: boosting skills, hedging bets, and staying current in the field. (2021) (4)
- Genomic data reveal similar genetic differentiation in aquifer species with different dispersal capabilities and life histories (2020) (4)
- No evidence for ecological segregation protecting native trout from invasive hybridization (2017) (4)
- Do edge effects occur over large spatial scales (2000) (4)
- Sex-Biased Gene Flow Among Elk in the Greater Yellowstone Ecosystem (2014) (4)
- A framework to integrate innovations in invasion science for proactive management (2022) (4)
- Sequencing primers and SNPs for rapidly evolving reproductive loci in endangered ibex and their kin (Bovidae, Capra spp.) (2006) (4)
- Environmental DNA Methods for Ecological Monitoring and Biodiversity Assessment in Estuaries (2022) (4)
- Mapping of Adaptive Traits Enabled by a High-Density Linkage Map for Lake Trout (2020) (3)
- Geographic structure in goat diversity as revealed by AFLP molecular markers (2002) (3)
- exonsampler: a computer program for genome‐wide and candidate gene exon sampling for targeted next‐generation sequencing (2014) (3)
- The application of genetic indicators in wild populations: Potential and pitfalls for genetic monitoring [Chapter 15] (2015) (3)
- Correction: Loss of Genetic Diversity and Increased Subdivision in an Endemic Alpine Stonefly Threatened by Climate Change (2016) (2)
- Population Genomics Training for the Next Generation of Conservation Geneticists: ConGen 2018 Workshop (2020) (2)
- An ecological perspective on the changing face of Brucella abortus in the western United States (2013) (2)
- Red Fox Ancestry and Connectivity Assessments Reveal Minimal Fur Farm Introgression in Greater Yellowstone Ecosystem (2018) (2)
- AgeStrucNb: Software for Simulating and Detecting Changes in the Effective Number of Breeders (Nb) (2020) (2)
- 20. Origins And Diffusion Of Domestic Goats Inferred From DNA Markers: Example Analyses Of mtDNA, Y Chromosome, And Microsatellites (2019) (1)
- Corrigendum to "Evolution and taxonomy of the wild species of the genus Ovis (Mammalia, Artiodactyla, Bovidae)" [Mol. Phylogenet. Evol. 54(2) (2010) 315-326]. (2017) (1)
- A New Approach to Evaluate and Reduce Uncertainty of Model-Based Biodiversity Projections for Conservation Policy Formulation (2021) (1)
- Conserving Genetic Diversity in Yellowstone Bison The effects of population fluctuations and variance in male reproductive success in age structured populations (2010) (1)
- Tolerance of aquifer stoneflies to repeated hypoxia exposure and oxygen dynamics in an alluvial aquifer. (2020) (1)
- Landscape genomics: A brief perspective [Chapter 9] (2010) (1)
- Rapid SNP genotyping, sex identification, and hybrid-detection in threatened bull trout (2022) (1)
- Discovery of 20,000 RAD–SNPs and development of a 52-SNP array for monitoring river otters (2016) (0)
- Guest Box 13 Inbreeding depression in song sparrows (2012) (0)
- Erratum: Gene-culture coevolution between cattle milk protein genes and human lactase genes (2004) (0)
- Population structure of obligate groundwater amphipod crustaceans (Stygobromus sp.) in alluvial aquifers (2022) (0)
- chr7.all.filter (2015) (0)
- Gene expression estimates: Influence of sequencing library construction, fish sampling methods, and tissue harvesting time (2021) (0)
- Impacts of modern moleculargenetic techniques onconservation biology (2007) (0)
- Genomic data reveal similar genetic differentiation between invertebrates living under and on a riverine floodplain (2016) (0)
- VarGoats project: a dataset of 1159 whole-genome sequences to dissect Capra hircus global diversity (2021) (0)
- Landscape connectivity and genetic structure in a mainstem and a tributary stonefly (Plecoptera) species using a novel reference genome. (2022) (0)
- SOCIAL – ECOLOGICAL SYSTEMS IN MOUNTAIN LANDSCAPES A social – ecological perspective for riverscape management in the Columbia River Basin (2018) (0)
- Predicting Disease Spread in Greater Yellowstone Ungulates Using Parasite DNA Markers (2006) (0)
- Remarkable Anoxia Tolerance by Stoneflies from a Floodplain Aquifer (2020) (0)
- MITOCHONDRIAL-DNA VARIATION AND GENETIC-POPULATION STRUCTURE IN ROCKY MOUNTAIN BIGHORN SHEEP (aVIS (2014) (0)
- High Connectivity among Argali Sheep from Afghanistan and Adjacent Countries: A Noninvasive Assessment Using Neutral and Candidate Gene Microsatellites (2010) (0)
- CDFISH: an individual-based, spatially-explicit, landscape genetics simulator for aquatic species in complex riverscapes (2011) (0)
- Lack of sex-biased dispersal promotes fine-scale genetic structure in alpine ungulates (2014) (0)
- Two African Origins and Extremely Weak Population Structure in D Two African Origins and Extremely Weak Population Structure in Donkeys onkeys Revealed by Mitochondrial DNA Sequencing Revealed by Mitochondrial DNA Sequencing (2002) (0)
- Assessing Climate Change Effects on Aquatic Ecosystems in the Crown of the Continent : Implications for Adaptive Management (2014) (0)
- chr8.all.filter (2015) (0)
- Signatures of natural and unnatural selection: evidence from an immune system gene in African buffalo (2014) (0)
- Tolerance of aquifer stoneflies to repeated hypoxia exposure and oxygen dynamics in an alluvial aquifer (2020) (0)
- Assessments of species’ vulnerability to climate change: from pseudo to science (2016) (0)
- Challenges in Columbia River fisheries conservation: a response to Duda et al . (2019) (0)
- Genomic data reveal similar genetic differentiation between species with vastly different dispersal capabilities and life histories (2018) (0)
- Evidence for adaptive introgression of exons across a hybrid swarm in deer (2019) (0)
- parasitism in wild bighorn sheep Candidate gene microsatellite variation is associated with (2009) (0)
- Influence of RNA‐Seq library construction, sampling methods, and tissue harvesting time on gene expression estimation (2023) (0)
- Broad maternal geographic origin of domestic sheep in Anatolia and the Zagros. (2022) (0)
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