Hagit Shatkay | Academic Influence

Hagit Shatkay's AcademicInfluence.com Rankings

Hagit Shatkay

Computer Science

#10748

World Rank

#11312

Historical Rank

Data Mining

#284

World Rank

#285

Historical Rank

Machine Learning

#5265

World Rank

#5332

Historical Rank

Database

#8945

World Rank

#9405

Historical Rank

computer-science Degrees

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Computer Science

Hagit Shatkay's Degrees

PhD Computer Science University of Maryland, Baltimore County
Masters Computer Science University of Maryland, Baltimore County
Bachelors Computer Science University of Maryland, Baltimore County

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Why Is Hagit Shatkay Influential?

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According to Wikipedia, Hagit Shatkay was an Israeli-American computer scientist, known for her contributions to computational biology, medical informatics, bioinformatics, and machine learning. She was a professor in the department of computer and information sciences at the University of Delaware. Shatkay was a senior member and served on the board of directors of the International Society for Computational Biology.

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Hagit Shatkay's Published Works

Number of citations in a given year to any of this author's works

Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author

Published Works

A large-scale evaluation of computational protein function prediction (2013) (784)
F-SNP: computationally predicted functional SNPs for disease association studies (2007) (360)
Approximate queries and representations for large data sequences (1996) (306)
Mining the Biomedical Literature in the Genomic Era: An Overview (2003) (306)
Learning Topological Maps with Weak Local Odometric Information (1997) (219)
The Protein-Protein Interaction tasks of BioCreative III: classification/ranking of articles and linking bio-ontology concepts to full text (2011) (212)
Combining multi-species genomic data for microRNA identification using a Naïve Bayes classifier (2006) (197)
Whole-genome shotgun assembly and comparison of human genome assemblies (2004) (195)
New directions in biomedical text annotation: definitions, guidelines and corpus construction (2006) (190)
Genes, Themes, and Microarrays: Using Information Retrieval for Large-Scale Gene Analysis (2000) (189)
Multi-dimensional classification of biomedical text: Toward automated, practical provision of high-utility text to diverse users (2008) (130)
SherLoc: high-accuracy prediction of protein subcellular localization by integrating text and protein sequence data (2007) (129)
SherLoc2: a high-accuracy hybrid method for predicting subcellular localization of proteins. (2009) (127)
Text mining for biology - the way forward: opinions from leading scientists (2008) (109)
Integrating image data into biomedical text categorization (2006) (109)
An integrative scoring system for ranking SNPs by their potential deleterious effects (2009) (100)
Discovering semantic features in the literature: a foundation for building functional associations (2006) (89)
EpiLoc: A (Working) Text-Based System for Predicting Protein Subcellular Location (2007) (75)
Utilizing ECG-Based Heartbeat Classification for Hypertrophic Cardiomyopathy Identification (2015) (65)
BNTagger: improved tagging SNP selection using Bayesian networks (2006) (59)
Hairpins in bookstacks: Information retrieval from biomedical text (2005) (48)
Protein Function Prediction using Text-based Features extracted from the Biomedical Literature: The CAFA Challenge (2013) (42)
Learning models for robot navigation (1999) (41)
How to Get the Most out of Your Curation Effort (2009) (38)
Learning Geometrically-Constrained Hidden Markov Models for Robot Navigation: Bridging the Topological-Geometrical Gap (2011) (34)
Information Retrieval Meets Gene Analysis (2002) (31)
Identifying Ventricular Arrhythmias and Their Predictors by Applying Machine Learning Methods to Electronic Health Records in Patients With Hypertrophic Cardiomyopathy(HCM-VAr-Risk Model) (2019) (30)
Significantly Improved Prediction of Subcellular Localization by Integrating Text and Protein Sequence Data (2005) (28)
The Fourier Transform - A Primer (1995) (26)
An Automatic System for Extracting Figures and Captions in Biomedical PDF Documents (2011) (23)
Reproductive phasiRNAs in grasses are compositionally distinct from other classes of small RNAs. (2018) (22)
Text as data: using text-based features for proteins representation and for computational prediction of their characteristics. (2015) (22)
Figure and caption extraction from biomedical documents (2019) (22)
Breast Cancer Prognosis via Gaussian Mixture Regression (2006) (21)
Learning Topological Maps from Weak Odometric Information (1997) (18)
Ranking single nucleotide polymorphisms by potential deleterious effects (2008) (16)
Applying Probabilistic Thematic Clustering for Classification in the TREC 2005 Genomics Track (2005) (15)
Compound image segmentation of published biomedical figures (2018) (15)
Protein (multi-)location prediction: utilizing interdependencies via a generative model (2015) (14)
Using Cluster Ensemble and Validation to Identify Subtypes of Pervasive Developmental Disorders (2007) (13)
Exploring a new space of features for document classification: figure clustering (2006) (12)
Functionally informative tag SNP selection using a pareto-optimal approach: playing the game of life (2009) (12)
Identifying hypertrophic cardiomyopathy patients by classifying individual heartbeats from 12-lead ECG signals (2014) (11)
CIS UDEL Working Notes on ImageCLEF 2015: Compound Figure Detection Task (2015) (11)
Learning Hidden Markov Models with Geometric Information (1997) (11)
An effective biomedical document classification scheme in support of biocuration: addressing class imbalance (2019) (11)
Using Hidden Markov Models to capture temporal aspects of ultrasound data in prostate cancer (2015) (11)
Finding Themes in Medline Documents: Probabilistic Similarity Search (2000) (10)
Heading in the Right Direction (1998) (10)
Effective biomedical document classification for identifying publications relevant to the mouse Gene Expression Database (GXD) (2017) (10)
Protein (multi-)location prediction: using location inter-dependencies in a probabilistic framework (2013) (10)
Mining the Biomedical Literature (2012) (9)
Use of figures in literature mining for biomedical digital libraries (2006) (9)
Identifying patterns of associated-conditions through topic models of Electronic Medical Records (2016) (9)
Utilizing image-based features in biomedical document classification (2015) (8)
Translational Knowledge Discovery Between Drug Interactions and Pharmacogenetics (2019) (8)
Learning Hidden Markov Models with Geometrical Constraints (1999) (7)
Prostate Cancer: Improved Tissue Characterization by Temporal Modeling of Radio-Frequency Ultrasound Echo Data (2016) (7)
A linear classifier based on entity recognition tools and a statistical approach to method extraction in the protein-protein interaction literature (2011) (7)
Biomedical Text Mining (2019) (6)
Testing extensive use of NER tools in article classification and a statistical approach for method interaction extraction in the protein-protein interaction literature (2010) (6)
UDEL CIS Working Notes in ImageCLEF 2016 (2016) (6)
OCR-based image features for biomedical image and article classification: identifying documents relevant to cis-regulatory elements (2012) (6)
Stochastic Modeling of Temporal Enhanced Ultrasound: Impact of Temporal Properties on Prostate Cancer Characterization (2018) (6)
Learning Geometrically-Constrained Hidden Markov Models for Robot Navigation: Bridging the Geometrical-Topological Gap (2002) (6)
ThurGood: Evaluating Assembly-to-Assembly Mapping (2004) (6)
Integrating image caption information into biomedical document classification in support of biocuration (2020) (5)
Identifying growth-patterns in children by applying cluster analysis to electronic medical records (2014) (5)
Two Birds, One Stone: Selecting Functionally Informative Tag SNPs for Disease Association Studies (2007) (5)
Co-occurrence of medical conditions: Exposing patterns through probabilistic topic modeling of snomed codes (2018) (5)
Linking Literature, Information, and Knowledge for Biology - Workshop of the BioLink Special Interest Group, ISMB/ECCB 2009, Stockholm, Sweden, June 28-29, 2009, Revised Selected Papers (2010) (5)
Extracting Figures and Captions from Scientific Publications (2018) (5)
Segmenting Compound Biomedical Figures into Their Constituent Panels (2017) (5)
Building a classifier for identifying sentences pertaining to disease-drug relationships in tardive dyskinesia (2012) (4)
Correction: A linear classifier based on entity recognition tools and a statistical approach to method extraction in the protein-protein interaction literature (2011) (4)
Finding Themes in Medline Documents (2000) (4)
What We Found on Our Way to Building a Classifier: A Critical Analysis of the AHA Screening Questionnaire (2013) (4)
Domain-Informed Neural Networks for Interaction Localization Within Astroparticle Experiments (2021) (4)
Chronic Kidney Disease stratification using office visit records: Handling data imbalance via hierarchical meta-classification (2018) (4)
Assessing chronic kidney disease from office visit records using hierarchical meta-classification of an imbalanced dataset (2017) (3)
Proceedings of the ACM fourth international workshop on Data and text mining in biomedical informatics (2010) (2)
Utilizing image and caption information for biomedical document classification (2021) (2)
Machine Learning Methods for Identifying Atrial Fibrillation Cases and Their Predictors in Patients With Hypertrophic Cardiomyopathy: The HCM-AF-Risk Model (2021) (2)
Overview of the Ninth Annual Meeting of the BioLINK SIG at ISMB: Linking Literature, Information and Knowledge for Biology (2009) (2)
Toward Computer-Assisted Text Curation: Classification Is Easy (Choosing Training Data Can Be Hard...) (2009) (2)
Detecting and using document structure in scientific text (2012) (2)
A Method for Quantifying Position Reconstruction Uncertainty in Astroparticle Physics using Bayesian Networks (2022) (2)
Identifying articles relevant to drug-drug interaction: Addressing class imbalance (2017) (2)
Abstract 19765: Efficacy of the American Heart Association Questionnaire in Identifying Electrocardiographic and Echocardiographic Abnormalities in Young Athletes During Community-based Screening (2010) (2)
Models of temporal enhanced ultrasound data for prostate cancer diagnosis: the impact of time-series order (2017) (2)
Searching for High-Utility Text in the Biomedical Literature A Preliminary Report (2005) (2)
Abstract 15967: Identifying Ventricular Arrhythmia Cases and Their Predictors by Applying Machine Learning Methods to Electronic Health Records (EHR) of Hypertrophic Cardiomyopathy (HCM) Patients (2017) (2)
Co-occurrence of Medical Conditions: Exposing Patterns Through Probabilistic Topic Modeling (2018) (1)
Using unsupervised learning to determine risk level for left ventricular diastolic dysfunction (2014) (1)
Improved Multi-Label Classification Using Inter-Dependence Structure via a Generative Mixture Model (2016) (1)
Corrigendum to: Utilizing image and caption information for biomedical document classification (2021) (1)
Modality-Classification of Microscopy Images Using Shallow Variants of Deep Networks (2020) (1)
Advances in Bioinformatics - 4th International Workshop on Practical Applications of Computational Biology and Bioinformatics 2010 (IWPACBB 2010), Guimarães, Portugal, 16-18 June 2010 (2010) (1)
Learning Hidden Markov Models with Geometric Information Learning Hidden Markov Models with Geometric Information (1997) (1)
Proceedings of the ACL-ISMB Workshop on Linking Biological Literature, Ontologies and Databases: Mining Biological Semantics@ISMB 2005, Detroit, MI, USA June 24, 2005 (2005) (1)
Machine Learning for Computational Haplotype Analysis (2008) (1)
Protein (multi-)location prediction: using location inter-dependencies in a probabilistic framework (2014) (1)
Proceedings of the ACL 2012 workshop on Detecting Structure in Scholarly Discourse (DSSD-2012) (2012) (1)
Functionally informative tag SNP selection using a Pareto-optimal approach. (2010) (1)
Predicting Protein Function using Text Data from the Biomedical Literature (2011) (1)
Protein Function Prediction using Text-based Features extracted from the Biomedical Literature: The CAFA Challenge (2013) (1)
International Conference on Bioinformatics and Biomedicine ( BIBM 2014 ) Special (2015) (1)
ANIMO: Annotation of Biomed Image Modalities (2021) (0)
Toward ECG-based analysis of hypertrophic cardiomyopathy: a novel ECG segmentation method for handling abnormalities (2022) (0)
Abstract 13828: Safety During Treadmill Exercise in Patients With High Gradient Hypertrophic Cardiomyopathy. (2011) (0)
Correction to: Stochastic Sequential Modeling: Toward Improved Prostate Cancer Diagnosis Through Temporal-Ultrasound (2020) (0)
Erratum to: A linear classifier based on entity recognition tools and a statistical approach to method extraction in the protein-protein interaction literature (2012) (0)
Data and text mining Compound image segmentation of published biomedical figures (2018) (0)
Putting It All Together: Current Applications and Future Directions (2012) (0)
Increasing the Discovery Power and Condence Levels of Disease Association Studies: A Survey (2014) (0)
Corrigendum to "Text as data: Using text-based features for proteins representation and for computational prediction of their characteristics" [Methods 74 (2015) 54-64]. (2016) (0)
Data and text mining Figure and caption extraction from biomedical documents (2019) (0)
DTMBIO workshop summary (2010) (0)
Faculty Opinions recommendation of Using the Future to "Sort Out" the Present: Rankprop and Multitask Learning for Medical Risk Evaluation. (2018) (0)
APPENDICES TO THE GUIDELINES FOR ANNOTATION (2006) (0)
The Fourier Transform -a Primer the Fourier Transform { a Primer (1995) (0)
Translational drug–interaction corpus (2022) (0)
Reproductive phasiRNAs in grasses are compositionally distinct from other classes of small RNAs (2018) (0)
MultiLoc 2 and SherLoc 2 : improved prediction of subcellular protein localization (2009) (0)
Fundamental Concepts in Biomedical Text Analysis (2012) (0)
Stochastic Sequential Modeling: Toward Improved Prostate Cancer Diagnosis Through Temporal-Ultrasound (2020) (0)
Proceedings of the 2009 workshop of the BioLink Special Interest Group, international conference on Linking Literature, Information, and Knowledge for Biology (2009) (0)
HCM-AF-Risk Model to Identify Cases and Predictors of Atrial Fibrillation in Hypertrophic Cardiomyopathy (2020) (0)
Identifying Experimental Evidence in Biomedical Abstracts Relevant to Drug-Drug Interactions (2018) (0)
Faculty Opinions recommendation of A method for detecting and characterizing outbreaks of infectious disease from clinical reports. (2017) (0)
Summary of the BioLINK SIG 2013 meeting at ISMB/ECCB 2013 (2015) (0)
Triage Based on Figure Classification (2006) (0)

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What Schools Are Affiliated With Hagit Shatkay?

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