Heidi Sosik
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American biologist, oceanographer
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Heidi Sosikbiology Degrees
Biology
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#3397
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Oceanography
#22
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#30
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Marine Biology
#129
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#144
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Biology
Heidi Sosik's Degrees
- PhD Biological Oceanography University of California, Santa Cruz
- Masters Marine Science University of California, Santa Cruz
- Bachelors Biology University of California, Santa Cruz
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Why Is Heidi Sosik Influential?
(Suggest an Edit or Addition)According to Wikipedia, Heidi Sosik is an American biologist, oceanographer, and inventor based at the Woods Hole Oceanographic Institution. Career She is a senior scientist in the Stanley W. Watson Chair for Excellence in Oceanography; Director of WHOI's Center for Ocean, Marine, and Seafloor Observing Systems; Chief Scientist of the Martha's Vineyard Coastal Observatory ; and lead scientist for the Northeast United States Shelf Long Term Ecological Research program. She is the co-creator of the Imaging FlowCytobot, an automated underwater microscope that has been used to study microscopic ocean life over time and to prevent shellfish poisoning. Her inventions and research in phytoplankton ecology has revolutionized the ability to track changes in phytoplankton community composition over time, including at the MVCO time series site, as part of the Northeast United States Shelf Long Term Ecological Research program and through research labs that utilize the commercially available Imaging FlowCytobot and expertise provided by the Woods Hole Oceanographic Institution Plankton Wiki page.
Heidi Sosik's Published Works
Number of citations in a given year to any of this author's works
Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): Illuminating the Functional Diversity of Eukaryotic Life in the Oceans through Transcriptome Sequencing (2014) (813)
- Massive Phytoplankton Blooms Under Arctic Sea Ice (2012) (622)
- Determination of spectral absorption coefficients of particles, dissolved material and phytoplankton for discrete water samples (2000) (370)
- Automated taxonomic classification of phytoplankton sampled with imaging‐in‐flow cytometry (2007) (356)
- A submersible imaging‐in‐flow instrument to analyze nano‐and microplankton: Imaging FlowCytobot (2007) (333)
- Phytoplankton blooms beneath the sea ice in the Chukchi sea (2014) (188)
- Globally Consistent Quantitative Observations of Planktonic Ecosystems (2019) (177)
- An Ocean-Colour Time Series for Use in Climate Studies: The Experience of the Ocean-Colour Climate Change Initiative (OC-CCI) (2019) (171)
- FIRST HARMFUL DINOPHYSIS (DINOPHYCEAE, DINOPHYSIALES) BLOOM IN THE U.S. IS REVEALED BY AUTOMATED IMAGING FLOW CYTOMETRY 1 (2010) (165)
- Light absorption by phytoplankton, photosynthetic pigments and detritus in the California Current System (1995) (158)
- Phytoplankton functional types from Space. (2014) (150)
- An automated submersible flow cytometer for analyzing pico- and nanophytoplankton: FlowCytobot (2003) (134)
- Absorption, fluorescence, and quantum yield for growth in nitrogen-limited Dunaliella tertiolecta (1991) (125)
- The United States' Next Generation of Atmospheric Composition and Coastal Ecosystem Measurements: NASA's Geostationary Coastal and Air Pollution Events (GEO-CAPE) Mission (2012) (124)
- Effects of iron enrichment on phytoplankton in the Southern Ocean during late summer: active fluorescence and flow cytometric analyses (2000) (107)
- Optical tools for ocean monitoring and research (2008) (104)
- Growth rates of coastal phytoplankton from time‐series measurements with a submersible flow cytometer (2003) (101)
- Satellite sensor requirements for monitoring essential biodiversity variables of coastal ecosystems (2018) (100)
- Chlorophyll fluorescence from single cells: Interpretation of flow cytometric signals (1989) (100)
- Primary productivity and its regulation in the Pacific Sector of the Southern Ocean (2003) (97)
- DIEL VARIATIONS IN OPTICAL PROPERTIES OF MICROMONAS PUSILLA (PRASINOPHYCEAE) 1 (2002) (92)
- A compilation of global bio-optical in situ data for ocean-colour satellite applications – version two (2015) (83)
- New approaches and technologies for observing harmful algal blooms (2005) (82)
- Flow cytometric determination of size and complex refractive index for marine particles: comparison with independent and bulk estimates. (2003) (82)
- Physiological and ecological drivers of early spring blooms of a coastal phytoplankter (2016) (80)
- Optics, particles, stratification, and storms on the New England continental shelf (2001) (76)
- Phytoplankton and iron limitation of photosynthetic efficiency in the Southern Ocean during late summer (2002) (75)
- Continuous automated imaging-in-flow cytometry for detection and early warning of Karenia brevis blooms in the Gulf of Mexico (2013) (65)
- Cryptic coloration and mirrored sides as camouflage strategies in near‐surface pelagic habitats: Implications for foraging and predator avoidance (2003) (65)
- WHOI-Plankton- A Large Scale Fine Grained Visual Recognition Benchmark Dataset for Plankton Classification (2015) (63)
- EFFECTS OF TEMPERATURE ON GROWTH, LIGHT ABSORPTION, AND QUANTUM YIELD IN DUNALIELLA TERTIOLECTA (CHLOROPHYCEAE) 1 (1994) (63)
- Distance maps to estimate cell volume from two‐dimensional plankton images (2012) (62)
- Phytoplankton photosynethetic characteristics from fluorescence induction assays of individual cells (1996) (62)
- BIOMAPER-II: an integrated instrument platform for coupled biological and physical measurements in coastal and oceanic regimes (2002) (61)
- Contributions of phytoplankton and other particles to inherent optical properties in New England continental shelf waters (2003) (60)
- Parasitic infection of the diatom Guinardia delicatula, a recurrent and ecologically important phenomenon on the New England Shelf (2014) (58)
- Phytoplankton assemblage structure in and around a massive under-ice bloom in the Chukchi Sea (2014) (55)
- Temporal and vertical variability in optical properties of New England shelf waters during late summer and spring (2001) (55)
- Bio-optical modeling of primary production: consequences of variability in quantum yield and specific absorption (1996) (54)
- Rapid growth and concerted sexual transitions by a bloom of the harmful dinoflagellate Alexandrium fundyense (Dinophyceae) (2015) (48)
- Sixty years of Sverdrup : a retrospective of progress in the study of phytoplankton blooms (2014) (45)
- Diel size distributions reveal seasonal growth dynamics of a coastal phytoplankter (2014) (44)
- Storage of marine particulate samples for light𠅀absorption measurements (1999) (44)
- Flow Cytometry in Phytoplankton Research (2010) (42)
- A Framework for a Marine Biodiversity Observing Network Within Changing Continental Shelf Seascapes (2014) (41)
- Feature‐based classification of optical water types in the Northwest Atlantic based on satellite ocean color data (2003) (39)
- Diatoms favor their younger daughters (2012) (36)
- ILTER – The International Long-Term Ecological Research Network as a Platform for Global Coastal and Ocean Observation (2019) (33)
- Seasonal and interannual correlations between right-whale distribution and calving success and chlorophyll concentrations in the Gulf of Maine, USA (2009) (30)
- Automatic plankton quantification using deep features (2019) (30)
- Ocean Time Series Observations of Changing Marine Ecosystems: An Era of Integration, Synthesis, and Societal Applications (2019) (29)
- Complexities of bloom dynamics in the toxic dinoflagellate Alexandrium fundyense revealed through DNA measurements by imaging flow cytometry coupled with species-specific rRNA probes. (2014) (29)
- Photosynthetic characteristics of marine phytoplankton from pump-during-probe fluorometry of individual cells at sea. (1999) (28)
- Analysis of apparent optical properties and ocean color models using measurements of seawater constituents in New England continental shelf surface waters (2004) (28)
- Diversity of Synechococcus at the Martha’s Vineyard Coastal Observatory: Insights from Culture Isolations, Clone Libraries, and Flow Cytometry (2015) (26)
- Characterizing seawater constituents from optical properties (2007) (26)
- PHYLOGENETIC ANALYSIS OF BRACHIDINIUM CAPITATUM (DINOPHYCEAE) FROM THE GULF OF MEXICO INDICATES MEMBERSHIP IN THE KARENIACEAE 1 (2011) (26)
- Variability of Photosynthetic Parameters of the Surface Phytoplankton in the Black Sea (2003) (24)
- Inversion of spectral absorption coefficients to infer phytoplankton size classes, chlorophyll concentration, and detrital matter. (2015) (22)
- Beyond Chlorophyll Fluorescence: The Time is Right to Expand Biological Measurements in Ocean Observing Programs (2018) (22)
- Phytoplankton light absorption in the deep chlorophyll maximum layer of the Black Sea (2018) (20)
- An operational overview of the EXport Processes in the Ocean from RemoTe Sensing (EXPORTS) Northeast Pacific field deployment (2021) (20)
- Self-shading Effect by Radiance Meters on Upward Radiance Observed in Coastal Waters (18)
- Integrated Observations and Informatics Improve Understanding of Changing Marine Ecosystems (2018) (18)
- Taxonomic Classification of Phytoplankton with Multivariate Optical Computing, Part III: Demonstration (2013) (17)
- Bio-optical discrimination of diatoms from other phytoplankton in the surface ocean: Evaluation and refinement of a model for the Northwest Atlantic (2018) (16)
- A spectral model of underwater irradiance in the Black Sea (2009) (16)
- A fluorescence‐activated cell sorting subsystem for the Imaging FlowCytobot (2017) (15)
- Imaging FlowCytobot modified for high throughput by in‐line acoustic focusing of sample particles (2017) (15)
- Mesoscale variability in intact and ghost colonies of Phaeocystis antarctica in the Ross Sea: Distribution and abundance (2017) (14)
- Dynamics and functional diversity of the smallest phytoplankton on the Northeast US Shelf (2020) (13)
- Microzooplankton community structure investigated with imaging flow cytometry and automated live-cell staining (2016) (13)
- Seasons of Syn (2019) (12)
- Satellite detection of dinoflagellate blooms off California by UV reflectance ratios (2021) (11)
- Machine learning techniques to characterize functional traits of plankton from image data (2022) (10)
- Diatom Hotspots Driven by Western Boundary Current Instability (2021) (9)
- "Phytoplankton Composition from Space: towards a validation strategy for satellite algorithms" (2015) (8)
- Attaining an Operational Marine Biodiversity Observation Network (BON) Synthesis Report (2011) (8)
- Recommendations for plankton measurements on the GO-SHIP program with relevance to other sea-going expeditions. SCOR Working Group 154 GO-SHIP Report. (2020) (6)
- A Regional, Early Spring Bloom of Phaeocystis pouchetii on the New England Continental Shelf (2021) (6)
- 1 OPTICAL VARIABILITY IN COASTAL WATERS OF THE NORTHWEST ATLANTIC (1998) (5)
- Phytoplankton hotspot prediction with an unsupervised spatial community model (2017) (5)
- Marine Pelagic Ecosystem Responses to Climate Variability and Change (2022) (5)
- A Framework for Implementation Planning (2004) (4)
- Analysis of chlorophyll fluorescence in marine phytoplankton : interpretation of flow cytometric signals (1988) (4)
- Pump-during-probe fluorometry of phytoplankton: group-specific photosynthetic characteristics from individual cell analysis (1997) (4)
- Report on IOCCG Workshop Phytoplankton Composition from Space: towards a validationstrategy for satellite algorithms (2015) (4)
- Resonance control of acoustic focusing systems through an environmental reference table and impedance spectroscopy (2018) (4)
- INHERENT OPTICAL PROPERTIES IN NEW ENGLAND COASTAL WATERS : DECOMPOSITION INTO CONTRIBUTIONS FROM OPTICALLY IMPORTANT CONSTITUENTS (2002) (4)
- New Technologies to Acquire Time Series of Phytoplankton Community Structure : Submersible Image-inFlow Cytometry and Automated Taxonomic Classification (2012) (3)
- Informatics solutions for large ocean optics datasets (2012) (3)
- Seasonal environmental variability drives microdiversity within a coastal Synechococcus population (2021) (3)
- E ! ects of iron enrichment on phytoplankton in the Southern Ocean during late summer : active # uorescence and # ow cytometric analyses (2000) (3)
- Pump-During-Probe Technique for Measuring Photosynthetic Characteristics of Individual Algal Cells Using Flow Cytometry and Microfluorometry (1995) (3)
- DIEL VARIATIONS IN OPTICAL PROPERTIES OF MICROMONAS PUSILLA , A PRASINOPHYTE (2000) (3)
- 2014 labeled IFCB images (2010) (2)
- Front Resolving Observational Network with Telemetry (FRONT) (1999) (2)
- TIME SERIES OBSERVATIONS OF A PHYTOPLANKTON COMMUNITY MONITORED WITH A NEW SUBMERSIBLE FLOW CYTOMETER (2002) (2)
- 1 OPTICAL CLASSIFICATION OF NORTHWEST ATLANTIC WATER TYPES BASED ON SATELLITE OCEAN COLOUR DATA (2000) (2)
- Standards and practices for reporting plankton and other particle observations from images (2021) (2)
- Global satellite water classification data products over oceanic, coastal, and inland waters (2022) (2)
- Interoperable vocabulary for marine microbial flow cytometry (2022) (2)
- Twilight Zone Observation Network: A Distributed Observation Network for Sustained, Real-Time Interrogation of the Ocean's Twilight Zone (2021) (1)
- Learning seasonal phytoplankton communities with topic models (2017) (1)
- Corrigendum: ILTER – The International Long-Term Ecological Research Network as a Platform for Global Coastal and Ocean Observation (2020) (1)
- Time Series Measurements and Algorithm Development at the FRONT Site on the New England Continental Shelf (2001) (1)
- Gaussian-Dirichlet Random Fields for Inference over High Dimensional Categorical Observations (2020) (1)
- Comparison of Refractive Index Estimated from Single-Cell and Bulk Optical Properties (2001) (1)
- Inherent optical properties and diffuse attenuation coefficient aggregated within +/-6 nm of SeaWiFS, MODIS-AQUA, VIIRS, OLCI and MERIS bands, corrected Version 2019-06-12 (2019) (1)
- Ephemeral surface chlorophyll enhancement at the New England shelf break driven by Ekman restratification (2021) (1)
- Dependence of the Photosynthetic Quantum Yield on Phytoplankton Light Absorption: Equations for Assessing Primary Production in the Black Sea (2021) (1)
- Variability in Ocean Color Associated with Phytoplankton and Terrigenous Matter: Time Series Measurements and Algorithm Development at the FRONT Site on the New England Continental Shelf. Chapter 12 (2003) (1)
- Standards and practices for reporting plankton and other particle observations from images. Technical Manual. (2021) (1)
- Recommendations for Plankton Measurements on OceanSITES Moorings With Relevance to Other Observing Sites (2022) (1)
- Characterization and Modeling of Inherent Optical Properties in the Gulf of Maine (2002) (0)
- Spectral data aggregated within +/-2 nm of SeaWiFS, MODIS-AQUA and MERIS bands (2015) (0)
- Data Standards and Practices for Taxon-Resolved Phytoplankton Observations (2016) (0)
- Pump it Up workshop report (2017) (0)
- Project Title : Response of Participate Optical Properties to Coastal Mixing Processes : Analysis and Interpretation of Particle Light Scattering as Measured by Flow Cytometry (0)
- Inherent optical properties and diffuse attenuation coefficient aggregated within +/-2 nm of SeaWiFS, MODIS-AQUA, VIIRS, OLCI and MERIS bands (2019) (0)
- Advancing Access to New Technology for Sustained High Resolution Observations of Plankton: From Bloom Dynamics to Climate Change (2012) (0)
- Remote sensing reflectance aggregated within +/-2 nm of SeaWiFS, MODIS-AQUA, VIIRS, OLCI and MERIS bands (2019) (0)
- Preference and switching in the Kill-the-Winner functional response: Diversity, size structure, and synergistic grazing in plankton models (2019) (0)
- a Missing Link? - Mesoscale Distributions of Colonial Phaeocystis Antarctica and its Ghost Colonies in the Ross Sea (2016) (0)
- THE CONTRIBUTION OF PHYTOPLANKTON AND NON-PHYTOPLANKTON PARTICLES TO INHERENT AND APPARENT OPTICAL PROPERTIES IN NEW ENGLAND CONTINENTAL SHELF WATERS (2002) (0)
- Plankton Analysis by Automated Submersible Imaging Flow Cytometry: Transforming a Specialized Research Instrument into a Broadly Accessible Tool and Extending its Target Size Range (2011) (0)
- Toward a Virtual Laboratory to Assess Biodiversity from Data Produced by an Underwater Microscope (2016) (0)
- Sampling requirements to characterize the variance on multiscale processes in aquatic ecology (2015) (0)
- Remote sensing reflectance aggregated within +/-6 nm of SeaWiFS, MODIS-AQUA, VIIRS, OLCI and MERIS bands (2019) (0)
- Do we need photonic-based instruments to characterize multiscale processes in marine environments? (2012) (0)
- Patterns and Scales of Variability in the Optical Properties of Georges Bank Waters, with Special Reference to Phytoplankton Biomass and Production (1999) (0)
- Observing Plankton in the 21st Century: Big Data and Big Surprises (2019) (0)
- Satellite ocean color and aerosol validation at Martha's Vineyard Coastal Observatory (2006) (0)
- Biological and Physical Forcing of Picophytoplankton on the New England Shelf: New Insights From Submersible Flow Cytometry at the Martha's Vineyard Coastal Observatory (2008) (0)
- THE UNITED STATES’ NEXTGENERATION OF ATMOSPHERICCOMPOSITION AND COASTALECOSYSTEM MEASUREMENTS (2012) (0)
- Mesoscale Variability in Intact and Ghost Colonies of Phaeocystis antarctica 1 in the Ross Sea : Distribution and Abundance 2 3 by 4 5 (2017) (0)
- Inherent optical properties and diffuse attenuation coefficient at different wavelengths (2019) (0)
- Inherent optical properties and diffuse attenuation coefficient aggregated within +/-2 nm of SeaWiFS, MODIS-AQUA, VIIRS, OLCI and MERIS bands, corrected Version 2019-06-12 (2019) (0)
- A New Submersible Imaging-in-flow Instrument to Monitor Nano- and Microplankton: Imaging FlowCytobot (2004) (0)
- A modern coastal ocean observing system using data from advanced satellite and in situ sensors – an example (2015) (0)
- The future of ecosystem assessments is automation, collaboration, and artificial intelligence (2022) (0)
- Predator Switching Strength Controls Stability in Diamond-Shaped Food Web Models (2023) (0)
- Supplement of A compilation of global bio-optical in situ data for ocean colour satellite applications – version three (2022) (0)
- Response of Particulate Optical Properties to Coastal Mixing Processes: Analysis and Interpretation of Particle Light Scattering as Measured by Flow Cytometry (1998) (0)
- Automated validation of satellite derived coastal optical products (2007) (0)
- Chlorophyll a concentration obtained by HPLC and fluorometric/spectrophotometric determination (2019) (0)
- Seasonal Diversity Patterns of a Coastal Synechococcus Population (2016) (0)
- Traits, Rates, and Fates of Plankton: New Views from Automated Cytometry and Imaging (2020) (0)
- Diversity of Synechococcus at the Martha’s Vineyard Coastal Observatory: Insights from Culture Isolations, Clone Libraries, and Flow Cytometry (2015) (0)
- Cross-shelf exchange associated with a shelf-water streamer at the Mid-Atlantic Bight shelf edge (2023) (0)
- Using Essential Biodiversity Variables and Essential Ocean Variables, FAIR Guiding Principles, and the Principles of Action Ecology to Inform Our Understanding of Changing Marine Ecosystems (2018) (0)
- Particle size distribution at Ocean Station Papa from nanometers to millimeters constrained with intercomparison of seven methods (2023) (0)
- Fine Scale Phytoplankton Diversity of Galveston Bay: Imaging FlowCytobot Provides Insight into Microbial Community Dynamics (2016) (0)
- 2008 labeled IFCB images (2006) (0)
- NES-LTER: A New Long Term Ecological Research Site on the Northeast U.S. Shelf (2018) (0)
- What Not To Do: Anti-patterns for Developing Scientific Workflow Software Components (2013) (0)
- Spectral data aggregated within +/-6 nm of SeaWiFS, MODIS-AQUA and MERIS bands (2015) (0)
- Remote sensing reflectance at different wavelengths (2019) (0)
- LTER: Linking Pelagic Community Structure with Ecosystem Dynamics and Production Regimes on the Changing Northeast US Shelf (2016) (0)
- Advances in Automated Plankton Imaging: Enhanced Throughput, Automated Staining, and Extended Deployment Modes for Imaging FlowCytobot (2016) (0)
- High Resolution Time Series of Plankton Communities: From Early Warning of Harmful Blooms to Sentinels of Climate Change (2016) (0)
- Upwelling-Induced Primary Productivity in Coastal Waters of the Black Sea: Impact on Algorithms for Remote Sensing (1997) (0)
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