Hongbin Li
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Hongbin Licomputer-science Degrees
Computer Science
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Machine Learning
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Artificial Intelligence
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Computer Science
Hongbin Li's Degrees
- PhD Computer Science Stanford University
- Masters Computer Science Stanford University
- Bachelors Computer Science Tsinghua University
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(Suggest an Edit or Addition)Hongbin Li's Published Works
Number of citations in a given year to any of this author's works
Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- Mechanical unfolding intermediates in titin modules (1999) (755)
- Force-Clamp Spectroscopy Monitors the Folding Trajectory of a Single Protein (2004) (502)
- Reverse engineering of the giant muscle protein titin (2002) (488)
- Quantifying thiol–gold interactions towards the efficient strength control (2014) (457)
- Designed biomaterials to mimic the mechanical properties of muscles (2010) (434)
- The mechanical stability of ubiquitin is linkage dependent (2003) (432)
- The unfolding kinetics of ubiquitin captured with single-molecule force-clamp techniques. (2004) (329)
- Contour length and refolding rate of a small protein controlled by engineered disulfide bonds. (2007) (246)
- Point mutations alter the mechanical stability of immunoglobulin modules (2000) (207)
- Polyprotein of GB1 is an ideal artificial elastomeric protein. (2007) (204)
- PEVK domain of titin: an entropic spring with actin-binding properties. (2002) (191)
- Multiple conformations of PEVK proteins detected by single-molecule techniques (2001) (164)
- Chair-boat transitions in single polysaccharide molecules observed with force-ramp AFM (2002) (124)
- Highly ordered protein nanorings designed by accurate control of glutathione S-transferase self-assembly. (2013) (115)
- Fingerprinting polysaccharides with single-molecule atomic force microscopy (2001) (113)
- Forced Protein Unfolding Leads to Highly Elastic and Tough Protein Hydrogels (2013) (113)
- Single-molecule force spectroscopy reveals a mechanically stable protein fold and the rational tuning of its mechanical stability (2007) (110)
- Protein mechanics: from single molecules to functional biomaterials. (2010) (103)
- Atomic force microscopy reveals parallel mechanical unfolding pathways of T4 lysozyme: Evidence for a kinetic partitioning mechanism (2008) (102)
- Nonmechanical protein can have significant mechanical stability. (2006) (99)
- A functional single-molecule binding assay via force spectroscopy (2007) (96)
- Mechanical design of the first proximal Ig domain of human cardiac titin revealed by single molecule force spectroscopy. (2003) (87)
- Effects of Cysteine Proteases on the Structural and Mechanical Properties of Collagen Fibers* (2013) (79)
- Changes in Structural-Mechanical Properties and Degradability of Collagen during Aging-associated Modifications* (2015) (70)
- Ultrafast folding kinetics and cooperativity of villin headpiece in single-molecule force spectroscopy (2013) (69)
- Easyworm: an open-source software tool to determine the mechanical properties of worm-like chains (2014) (69)
- Single molecule force spectroscopy reveals engineered metal chelation is a general approach to enhance mechanical stability of proteins (2008) (68)
- How do chemical denaturants affect the mechanical folding and unfolding of proteins? (2008) (60)
- Highly covalent ferric-thiolate bonds exhibit surprisingly low mechanical stability. (2011) (60)
- Engineering Protein Hydrogels Using SpyCatcher-SpyTag Chemistry. (2016) (60)
- Hydrogen bond strength modulates the mechanical strength of ferric-thiolate bonds in rubredoxin. (2012) (56)
- Engineered elastomeric proteins with dual elasticity can be controlled by a molecular regulator. (2008) (56)
- Improved single molecule force spectroscopy using micromachined cantilevers. (2014) (52)
- High intrinsic mechanical flexibility of mouse prion nanofibrils revealed by measurements of axial and radial Young's moduli. (2014) (51)
- Direct observation of markovian behavior of the mechanical unfolding of individual proteins. (2008) (50)
- Hydrogels Constructed from Engineered Proteins. (2016) (49)
- Engineering tandem modular protein based reversible hydrogels. (2008) (43)
- Towards constructing extracellular matrix-mimetic hydrogels: an elastic hydrogel constructed from tandem modular proteins containing tenascin FnIII domains. (2013) (41)
- Mechanically tightening a protein slipknot into a trefoil knot. (2014) (41)
- Single Molecule Force Spectroscopy of Modular Proteins in the Nervous System (2000) (40)
- ‘Mechanical Engineering’ of Elastomeric Proteins: Toward Designing New Protein Building Blocks for Biomaterials (2008) (40)
- Rationally Designed Dynamic Protein Hydrogels with Reversibly Tunable Mechanical Properties (2014) (40)
- Tandem modular protein-based hydrogels constructed using a novel two-component approach. (2012) (37)
- Stabilization provided by neighboring strands is critical for the mechanical stability of proteins. (2008) (36)
- Protein-protein interaction regulates proteins' mechanical stability. (2008) (36)
- A facile way to tune mechanical properties of artificial elastomeric proteins-based hydrogels. (2012) (35)
- Optically controlled reversible protein hydrogels based on photoswitchable fluorescent protein Dronpa. (2017) (34)
- Engineering proteins with novel mechanical properties by recombination of protein fragments. (2006) (34)
- Sub-angstrom conformational changes of a single molecule captured by AFM variance analysis. (2006) (34)
- Mapping the Broad Structural and Mechanical Properties of Amyloid Fibrils. (2017) (34)
- Force-induced chemical reactions on the metal centre in a single metalloprotein molecule (2015) (33)
- The force-driven conformations of heparin studied with single molecule force microscopy. (2003) (33)
- Configurational entropy modulates the mechanical stability of protein GB1. (2008) (32)
- Single molecule force spectroscopy reveals that electrostatic interactions affect the mechanical stability of proteins. (2011) (32)
- Single molecule force spectroscopy reveals the molecular mechanical anisotropy of the FeS4 metal center in rubredoxin. (2013) (31)
- The molecular mechanism underlying mechanical anisotropy of the protein GB1. (2012) (30)
- Facile method of constructing polyproteins for single-molecule force spectroscopy studies. (2011) (28)
- Decorating a Blank Slate Protein Hydrogel: A General and Robust Approach for Functionalizing Protein Hydrogels. (2017) (28)
- Dynamics of protein folding and cofactor binding monitored by single-molecule force spectroscopy. (2011) (26)
- Single molecule force spectroscopy reveals that iron is released from the active site of rubredoxin by a stochastic mechanism. (2013) (26)
- Direct measurements of the mechanical stability of zinc-thiolate bonds in rubredoxin by single-molecule atomic force microscopy. (2011) (25)
- Single-molecule-level evidence for the osmophobic effect. (2011) (25)
- An ion signal responsive dynamic protein nano-spring constructed by high ordered host-guest recognition. (2016) (25)
- Protein Fragment Reconstitution as a Driving Force for Self‐Assembling Reversible Protein Hydrogels (2015) (24)
- Direct observation of tug-of-war during the folding of a mutually exclusive protein. (2009) (24)
- Harvesting Mechanical Work From Folding-Based Protein Engines: From Single-Molecule Mechanochemical Cycles to Macroscopic Devices (2019) (24)
- Single-molecule Force Spectroscopy Reveals Engineered Metal Chelation Is A General Approach To Enhance Mechanical Stability Of Proteins (2009) (23)
- Reversible unfolding-refolding of rubredoxin: a single-molecule force spectroscopy study. (2014) (22)
- Domain insertion effectively regulates the mechanical unfolding hierarchy of elastomeric proteins: toward engineering multifunctional elastomeric proteins. (2009) (21)
- Mechanical design of the third FnIII domain of tenascin-C. (2009) (20)
- Recombination of protein fragments: A promising approach toward engineering proteins with novel nanomechanical properties (2008) (19)
- Nanomechanical properties of tenascin-X revealed by single-molecule force spectroscopy. (2009) (19)
- Improved single molecule force spectroscopy using micromachined cantilevers (2014) (18)
- Single molecule force spectroscopy: a new tool for bioinorganic chemistry. (2018) (18)
- Metal Chelation Dynamically Regulates the Mechanical Properties of Engineered Protein Hydrogels. (2017) (18)
- Chemical, physical and morphological properties of bacterial biofilms affect survival of encased Campylobacter jejuni F38011 under aerobic stress. (2015) (18)
- The unfolding and folding dynamics of TNfnALL probed by single molecule force-ramp spectroscopy (2006) (18)
- Engineering proteins with tailored nanomechanical properties: a single molecule approach. (2007) (17)
- Engineered bi-histidine metal chelation sites map the structure of the mechanical unfolding transition state of an elastomeric protein domain GB1. (2012) (17)
- In situ Phase Transition of Elastin-like Polypeptide Chains Regulates Thermo-Responsive Properties of Elastomeric Protein-Based Hydrogels. (2020) (16)
- Response to Comment on "Force-Clamp Spectroscopy Monitors the Folding Trajectory of a Single Protein" (2004) (16)
- Single molecule force spectroscopy reveals a weakly populated microstate of the FnIII domains of tenascin. (2006) (16)
- Construction and characterization of kilobasepair densely labeled peptide-DNA. (2014) (15)
- An injectable self-healing protein hydrogel with multiple dissipation modes and tunable dynamic response. (2019) (15)
- Designing redox potential‐controlled protein switches based on mutually exclusive proteins (2012) (14)
- Enhancing the mechanical stability of proteins through a cocktail approach. (2011) (14)
- Dynamic protein hydrogels with reversibly tunable stiffness regulate human lung fibroblast spreading reversibly. (2019) (14)
- Kinetic partitioning mechanism governs the folding of the third FnIII domain of tenascin-C: evidence at the single-molecule level. (2011) (13)
- Single molecule force spectroscopy reveals critical roles of hydrophobic core packing in determining the mechanical stability of protein GB1. (2012) (13)
- Mechanical Unfolding Pathway of the High-Potential Iron-Sulfur Protein Revealed by Single-Molecule Atomic Force Microscopy: Toward a General Unfolding Mechanism for Iron-sulfur Proteins. (2018) (13)
- Dynamic protein self-assembly driven by host-guest chemistry and the folding-unfolding feature of a mutually exclusive protein. (2017) (13)
- Single-molecule force-clamp spectroscopy: dwell time analysis and practical considerations. (2011) (12)
- Engineering shape memory and morphing protein hydrogels based on protein unfolding and folding (2022) (12)
- A force-spectroscopy-based single-molecule metal-binding assay. (2009) (12)
- Phenotypic effects of Ehlers–Danlos syndrome‐associated mutation on the FnIII domain of tenascin‐X (2010) (11)
- Single Molecule Force Spectroscopy Reveals the Mechanical Design Governing the Efficient Translocation of the Bacterial Toxin Protein RTX. (2019) (10)
- Light-Responsive Dynamic Protein Hydrogels Based on LOVTRAP. (2021) (9)
- Twist and Shout: Single-Molecule Mechanochemistry. (2017) (8)
- Modeling the Hydrolysis of Iron-Sulfur Clusters (2019) (7)
- Modulating the mechanical stability of extracellular matrix protein tenascin-C in a controlled and reversible fashion. (2009) (7)
- Mechanically tightening, untying and retying a protein trefoil knot by single-molecule force spectroscopy† (2020) (7)
- Measuring "unmeasurable" folding kinetics of proteins by single-molecule force spectroscopy. (2010) (7)
- Slow Transition Path Times Reveal a Complex Folding Barrier in a Designed Protein (2020) (7)
- Toward Quantitative Prediction of the Mechanical Properties of Tandem Modular Elastomeric Protein-Based Hydrogels (2020) (6)
- Single molecule force spectroscopy reveals that the oxidation state of cobalt ions plays an important role in enhancing the mechanical stability of proteins. (2019) (6)
- Engineering protein polymers of ultrahigh molecular weight via supramolecular polymerization: towards mimicking the giant muscle protein titin† †Electronic supplementary information (ESI) available. See DOI: 10.1039/c9sc02128k (2019) (6)
- Engineering Proteins with Tailored Nanomechanical Properties: A Single Molecule Approach (2008) (5)
- Modulating the Mechanical Stability of Extracellular Matrix Protein Tenascin-C in a Controlled and Reversible Fashion (2010) (4)
- Mechanical Anisotropy in GNNQQNY Amyloid Crystals. (2018) (4)
- Direct monitoring of equilibrium protein folding-unfolding by atomic force microscopy: pushing the limit. (2019) (4)
- Decorating protein hydrogels reversibly enables dynamic presentation and release of functional protein ligands on protein hydrogels. (2019) (4)
- Single molecule force spectroscopy reveals the context dependent folding pathway of the C-terminal fragment of Top7 (2020) (3)
- Converting Muscle-mimetic Biomaterials to Cartilage-like Materials (2021) (3)
- Yellow fluorescent protein-based label-free tension sensors for monitoring integrin tension. (2020) (3)
- There Is Plenty of Room in The Folded Globular Proteins: Tandem Modular Elastomeric Proteins Offer New Opportunities in Engineering Protein‐Based Biomaterials (2021) (3)
- Staphylokinase Displays Surprisingly Low Mechanical Stability. (2017) (3)
- Engineering Protein-Clay Nanosheets Composite Hydrogels with Designed Arginine-Rich Proteins. (2019) (3)
- Fast Spatiotemporal Correlation Spectroscopy to Determine Protein Lateral Diffusion Laws in Live Cell Membranes (2016) (3)
- Templated folding of the RTX domain of the bacterial toxin adenylate cyclase revealed by single molecule force spectroscopy (2022) (2)
- Protein Hydrogels with Reversibly Patterned Multidimensional Fluorescent Images for Information Storage. (2022) (2)
- Single molecule force spectroscopy reveals that a two-coordinate ferric site is critical for the folding of holo-rubredoxin. (2020) (2)
- Understanding Prion Aggregation in Amyloids by Analyzing their Mechanical Properties using AFM (2013) (1)
- Molecular homogeneity of GB1 revealed by single molecule force spectroscopy. (2022) (1)
- Proteins with High Structural Similarity can have Different Mechanical Unfolding Behaviors (2017) (0)
- Highly Covalent Ferric-Thiolate Bonds in Rubredoxin Exhibit Surprisingly Low Mechanical Stability (2012) (0)
- Mechanically Untying a Protein Slipknot by Single Molecule Force Spectroscopy (2013) (0)
- Coil–Globule Transition of a Water-Soluble Polymer (2022) (0)
- Engineering tandem modular protein based reversible hydrogels w (2008) (0)
- Single Molecule Force Spectroscopy Reveals the Molecular Mechanical Anisotropy of the FeS4 Metal Center in Rubredoxin (2014) (0)
- Electrostatic Interactions Affect the Mechanical Stability of Elastomeric Proteins (2010) (0)
- Single-Molecule Force Spectroscopy Studies of Missense Titin Mutations That Are Likely Causing Cardiomyopathy (2021) (0)
- Modelling the Hydrolysis of Iron-Sulfur Clusters (2019) (0)
- Single Molecule Force Spectroscopy and Steered Molecular Dynamics Simulations Reveal the Mechanical Design of the Third FnIII Domain of Tenascin-C (2009) (0)
- Mechanical Unfolding and Folding of a Slipknot Protein Observed by using Optical Tweezers (2018) (0)
- Two-Molecule Force Spectroscopy on Proteins. (2023) (0)
- A Force Spectroscopy-Based Protein-Ligand Interaction Assay (2010) (0)
- Direct Observation of the Folding Trajectory of a Slipknotted Protein (2016) (0)
- Hydrogen Bond Strength Modulates the Mechanical Strength of Ferric-Thiolate Bonds in Rubredoxin (2013) (0)
- Single-Molecule Force Spectroscopy Reveals the Mechanical Design Governing the Efficient Translocation of Bacterial Toxin Protein RTX (2020) (0)
- Mechanically Tightening a Protein Slipknot into a Trefoil Knot (2014) (0)
- Mechanical Unfolding of the High Potential Iron-Sulfur Protein Probed by Single Molecule Atomic Force Microscopy (2018) (0)
- Domain Insertion Effectively Regulates the Mechanical Unfolding Hierarchy of Elastomeric Proteins: Toward Engineering Multifunctional Elastomeric Proteins (2010) (0)
- New insights into the folding–unfolding mechanism and conformations of cytochrome C (2022) (0)
- The complete folding trajectory of a single protein (2004) (0)
- Direct Equilibrium Protein Folding-Unfolding of Mechanically Labile Alpha Helical Protein by Atomic Force Microscopy (2020) (0)
- Directly Observing the Reversible Unfolding and Refolding of an Alpha/Beta Protein by Single-Molecule Atomic Force Microscopy (2015) (0)
- Designed Biomaterials to Mimic the Passive Elastic Properties of Muscles (2011) (0)
- GB Tags: Small Covalent Peptide Tags Based on Protein Fragment Reconstitution. (2021) (0)
- Mechanics of Proteins and Tailored Mechanics of Engineered Proteins (2011) (0)
- Single Molecule Force Spectroscopy Studies on Metalloproteins: Opportunities and Challenges. (2023) (0)
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What Schools Are Affiliated With Hongbin Li?
Hongbin Li is affiliated with the following schools:
