Ignacy Misztal
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Computer Science
Ignacy Misztal's Degrees
- PhD Computer Science University of Warsaw
- Masters Computer Science University of Warsaw
- Bachelors Computer Science University of Warsaw
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(Suggest an Edit or Addition)Ignacy Misztal's Published Works
Number of citations in a given year to any of this author's works
Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- Hot topic: a unified approach to utilize phenotypic, full pedigree, and genomic information for genetic evaluation of Holstein final score. (2010) (1024)
- BLUPF90 and related programs (BGF90) (2002) (818)
- A relationship matrix including full pedigree and genomic information. (2009) (696)
- Temperature-humidity indices as indicators of milk production losses due to heat stress. (2007) (533)
- Computing procedures for genetic evaluation including phenotypic, full pedigree, and genomic information. (2009) (453)
- Genetic Component of Heat Stress in Dairy Cattle, Development of Heat Index Function. (2000) (413)
- Genome-wide association mapping including phenotypes from relatives without genotypes. (2012) (373)
- Genetic component of heat stress in dairy cattle, parameter estimation. (2000) (356)
- Different genomic relationship matrices for single-step analysis using phenotypic, pedigree and genomic information (2011) (337)
- Bias in genomic predictions for populations under selection. (2011) (292)
- Single Step, a general approach for genomic selection (2014) (242)
- Genome-wide association mapping including phenotypes from relatives without genotypes in a single-step (ssGWAS) for 6-week body weight in broiler chickens (2014) (156)
- Effect of heat stress on production in Mediterranean dairy sheep (2005) (153)
- Using recursion to compute the inverse of the genomic relationship matrix. (2014) (150)
- Efficient computation of the genomic relationship matrix and other matrices used in single-step evaluation. (2011) (143)
- Implementation of an Animal Model for Genetic Evaluation of Dairy Cattle in the United States (1988) (142)
- Computing Aspects of a Nonlinear Method of Sire Evaluation for Categorical Data (1989) (140)
- Qxpak: a versatile mixed model application for genetical genomics and QTL analyses (2004) (140)
- Use of the preconditioned conjugate gradient algorithm as a generic solver for mixed-model equations in animal breeding applications. (2001) (138)
- Genetic evaluation using single-step genomic best linear unbiased predictor in American Angus. (2015) (134)
- Multiple-trait genomic evaluation of linear type traits using genomic and phenotypic data in US Holsteins. (2011) (128)
- Multiple-Trait Estimation of Variance Components of Yield and Type Traits Using an Animal Model (1992) (126)
- Analyses of growth curves of nellore cattle by multiple-trait and random regression models. (2003) (124)
- Reliable computing in estimation of variance components. (2008) (124)
- THRGIBBS1F90 for estimation of variance components with threshold and linear models. (2006) (117)
- Ancestral Relationships Using Metafounders: Finite Ancestral Populations and Across Population Relationships (2015) (117)
- Genetic parameters for first and second lactation milk yields of Polish black and white cattle with random regression test-day models. (1999) (114)
- Inexpensive Computation of the Inverse of the Genomic Relationship Matrix in Populations with Small Effective Population Size (2015) (112)
- Genome-wide marker-assisted selection combining all pedigree phenotypic information with genotypic data in one step: An example using broiler chickens. (2011) (110)
- Approximation of Prediction Error Variance in Large-Scale Animal Models (1988) (108)
- Genetic analysis of dystocia and calf mortality in Israeli-Holsteins by threshold and linear models. (1988) (107)
- Genetic parameter estimates for carcass and yearling ultrasound measurements in Brangus cattle. (1998) (107)
- Comparison of threshold vs linear and animal vs sire models for predicting direct and maternal genetic effects on calving difficulty in beef cattle. (2001) (106)
- Strategies for estimating the parameters needed for different test-day models. (2000) (106)
- Technical note: Computing strategies in genome-wide selection. (2008) (106)
- PREGSF90 – POSTGSF90: Computational tools for the implementation of single-step genomic selection and genome-wide association with ungenotyped individuals in BLUPF90 programs (2014) (105)
- Genetic components of heat stress for dairy cattle with multiple lactations. (2009) (105)
- Changing definition of productive life in US Holsteins: effect on genetic correlations. (2005) (105)
- Indirect Solution of Mixed Model Equations (1987) (104)
- Weighting Strategies for Single-Step Genomic BLUP: An Iterative Approach for Accurate Calculation of GEBV and GWAS (2016) (102)
- Properties of random regression models using linear splines. (2006) (102)
- Estimation of Variance Components with Large-Scale Dominance Models (1997) (101)
- Qxpak.5: Old mixed model solutions for new genomics problems (2011) (100)
- Comparison of random regression models with Legendre polynomials and linear splines for production traits and somatic cell score of Canadian Holstein cows. (2008) (99)
- Evaluation of Genome-Enabled Selection for Bacterial Cold Water Disease Resistance Using Progeny Performance Data in Rainbow Trout: Insights on Genotyping Methods and Genomic Prediction Models (2016) (97)
- Effect of different genomic relationship matrices on accuracy and scale. (2011) (96)
- Undesired phenotypic and genetic trend for stillbirth in Danish Holsteins. (2004) (95)
- Effect of heat stress on nonreturn rate in Holsteins: fixed-model analyses. (2002) (92)
- Estimation of additive and dominance genetic variances for body weight at harvest in rainbow trout, Oncorhynchus mykiss (2002) (90)
- Threshold-linear versus linear-linear analysis of birth weight and calving ease using an animal model: I. Variance component estimation. (1999) (90)
- Genetic parameter estimates from joint evaluation of purebreds and crossbreds in swine using the crossbred model. (2001) (87)
- Unknown-parent groups in single-step genomic evaluation. (2013) (81)
- Inbreeding in populations with incomplete pedigrees (1999) (80)
- Short communication: genotype by environment interaction due to heat stress. (2008) (79)
- Estimation of variance components including competitive effects of Large White growing gilts. (2005) (78)
- The Dimensionality of Genomic Information and Its Effect on Genomic Prediction (2016) (76)
- Effect of heat stress on nonreturn rate in Holstein cows: genetic analyses. (2002) (76)
- Restricted Maximum Likelihood Estimation of Variance Components in Animal Model Using Sparse Matrix Inversion and a Supercomputer (1990) (74)
- Threshold-linear versus linear-linear analysis of birth weight and calving ease using an animal model: II. Comparison of models. (1999) (73)
- Seasonality of days open in US Holsteins. (2003) (72)
- Frequentist p-values for large-scale-single step genome-wide association, with an application to birth weight in American Angus cattle (2019) (72)
- Sparse Matrix Inversion for Restricted Maximum Likelihood Estimation of Variance Components by Expectation-Maximization (1993) (72)
- Genetic study of individual preweaning mortality and birth weight in Large White piglets using threshold-linear models (2006) (71)
- Methods to approximate reliabilities in single-step genomic evaluation. (2013) (71)
- Threshold-linear estimation of genetic parameters for farrowing mortality, litter size, and test performance of Large White sows. (2005) (71)
- Genetic correlations among production, body size, udder, and productive life traits over time in Holsteins. (2004) (70)
- Accuracy of estimated breeding values with genomic information on males, females, or both: an example on broiler chicken (2015) (68)
- Incorporation of causative quantitative trait nucleotides in single-step GBLUP (2017) (68)
- Hot topic: Use of genomic recursions in single-step genomic best linear unbiased predictor (BLUP) with a large number of genotypes. (2015) (66)
- Current status of genomic evaluation (2020) (65)
- Technical note: recursive algorithm for inbreeding coefficients assuming nonzero inbreeding of unknown parents. (2008) (65)
- A unified approach to utilize phenotypic, full pedigree and genomic information for a genetic evaluation of Holstein final score (2009) (63)
- Experiences with a single-step genome evaluation. (2013) (63)
- Genetic parameters and trends for lamb survival and birth weight in a Merino flock divergently selected for multiple rearing ability. (2009) (63)
- Implementation of genomic recursions in single-step genomic best linear unbiased predictor for US Holsteins with a large number of genotyped animals. (2016) (62)
- Genetic components of heat stress in finishing pigs: development of a heat load function. (2008) (61)
- Methods for genomic evaluation of a relatively small genotyped dairy population and effect of genotyped cow information in multiparity analyses. (2014) (60)
- Complex models, more data: simpler programming? (1999) (58)
- Metafounders are related to Fst fixation indices and reduce bias in single-step genomic evaluations (2017) (58)
- Estimation of genetic parameters for somatic cell score in Holsteins. (1992) (58)
- Sustainable Food Production (2021) (57)
- Estimation of (Co)variance Function Coefficients for Test Day Yield with a Expectation-Maximization Restricted Maximum Likelihood Algorithm (1999) (57)
- Genetic correlations between two strains of Durocs and crossbreds from differing production environments for slaughter traits. (2007) (56)
- Short communication: genetic trends of milk yield under heat stress for US Holsteins. (2010) (56)
- Are evaluations on young genotyped animals benefiting from the past generations? (2014) (56)
- A Bayesian threshold-linear model evaluation of perinatal mortality, dystocia, birth weight, and gestation length in a Holstein herd. (2011) (55)
- Single-Step Genomic Evaluations from Theory to Practice: Using SNP Chips and Sequence Data in BLUPF90 (2020) (55)
- Genome-Wide Association Study for Carcass Traits in an Experimental Nelore Cattle Population (2017) (55)
- Genetic variability of milk components based on mid-infrared spectral data. (2010) (54)
- Male and female fertility and hatchability in chickens: a longitudinal mixed model approach. (2004) (54)
- Estimation of dominance variance in purebred Yorkshire swine. (1998) (54)
- Studies on the value of incorporating the effect of dominance in genetic evaluations of dairy cattle, beef cattle and swine (1998) (53)
- Dimensionality of genomic information and performance of the Algorithm for Proven and Young for different livestock species (2016) (53)
- National genetic evaluation of milk yield for heat tolerance of United States Holsteins (2005) (53)
- Studies on multiple trait and random regression models for genetic evaluation of beef cattle for growth. (2005) (51)
- Accuracies of genomic prediction of feed efficiency traits using different prediction and validation methods in an experimental Nelore cattle population. (2016) (51)
- BLUPF90 - a flexible mixed model program in Fortran 90 (2006) (50)
- Utility of on- and off-farm weather records for studies in genetics of heat tolerance (2006) (50)
- Genetic determination of the onset of heat stress on daily milk production in the US Holstein cattle. (2009) (49)
- Multiple trait genomic evaluation of conception rate in Holsteins. (2011) (49)
- Genetic components of heat stress in finishing pigs: Parameter estimation. (2008) (49)
- Investigation of genotype x environment interactions for weaning weight for Herefords in three countries. (2000) (48)
- Environmental effects on conception rates of Holsteins in New York and Georgia. (2008) (48)
- Genetic effects of heat stress on milk yield of Thai Holstein crossbreds. (2011) (48)
- Implementation of a sire-maternal grandsire model for evaluation of calving ease in the United States. (2003) (47)
- Multi-breed genetic evaluation in a Gelbvieh population. (2007) (47)
- Development of genomic predictions for harvest and carcass weight in channel catfish (2018) (47)
- Genetic parameters for days open and pregnancy rates in US Holsteins using different editing criteria. (2004) (47)
- Calving ease (Co)variance components for a sire-maternal grandsire threshold model. (2003) (46)
- Constructing covariance functions for random regression models for growth in Gelbvieh beef cattle. (2004) (46)
- Heat stress effects on farrowing rate in sows: genetic parameter estimation using within-line and crossbred models. (2012) (46)
- Genetic parameters estimated with multitrait and linear spline-random regression models using Gelbvieh early growth data. (2005) (46)
- Genetic components of days open under heat stress. (2004) (44)
- Approximation of Estimates of (Co)variance Components with Multiple-Trait Restricted Maximum Likelihood by Multiple Diagonalization for More Than One Random Effect (1995) (43)
- Crossbreed evaluations in single-step genomic best linear unbiased predictor using adjusted realized relationship matrices. (2016) (42)
- Animal Model Evaluation of Ayrshire Milk Yield with All Lactations, Herd-Sire Interaction, and Groups Based on Unknown Parents (1988) (41)
- Differing genetic trend estimates from traditional and genomic evaluations of genotyped animals as evidence of preselection bias in US Holsteins. (2018) (40)
- Fertility traits in spring-calving Aberdeen Angus cattle. 1. Model development and genetic parameters. (2007) (39)
- Genomic BLUP including additive and dominant variation in purebreds and F1 crossbreds, with an application in pigs (2016) (38)
- FSPAK: an interface for public domain sparse matrix subroutines (1994) (37)
- Extrapolation and Convergence Criteria with Jacobi and Gauss-Seidel Iteration in Animal Models (1987) (37)
- Method R estimates of additive genetic, dominance genetic, and permanent environmental fraction of variance for yield and health traits of Holsteins. (2000) (37)
- Threshold-linear analysis of measures of fertility in artificial insemination data and days to calving in beef cattle. (2004) (35)
- National evaluation for calving ease, gestation length and birth weight by linear and threshold model methodologies. (2002) (35)
- Implementation of single- and multiple-trait animal models for genetic evaluation of Holstein type traits (1993) (34)
- Relationships among estimates of inbreeding depression, dominance and additive variance for linear traits in Holsteins (1997) (34)
- Genetic evaluation of growth in nellore cattle by multiple-trait and random regression models. (2003) (34)
- Controlling bias in genomic breeding values for young genotyped bulls. (2019) (34)
- Comparison of computing properties of derivative and derivative-free algorithms in variance-component estimation by REML. (1994) (34)
- Comparisons of Holsteins with Brown Swiss and Jersey cows on the same farm for age at first calving and first calving interval. (2005) (34)
- Variance and covariance components for weaning weight for Herefords in three countries. (2000) (33)
- Studies on genetics of heat tolerance in dairy cattle with reduced weather information via cluster analysis. (2002) (33)
- Prediction of parental dominance combinations for planned matings, methodology, and simulation results. (1999) (33)
- BLUPF90 suite of programs for animal breeding with focus on genomics (2018) (33)
- BREEDING AND GENETICS SYMPOSIUM: Resilience and lessons from studies in genetics of heat stress. (2017) (32)
- Implications of SNP weighting on single‐step genomic predictions for different reference population sizes (2017) (32)
- Invited review: efficient computation strategies in genomic selection. (2017) (32)
- A practical longitudinal model for evaluating growth in Gelbvieh cattle. (2005) (32)
- Bivariate analysis of conception rates and test-day milk yields in Holsteins using a threshold-linear model with random regressions. (2009) (31)
- Changes in variance explained by top SNP windows over generations for three traits in broiler chicken (2014) (31)
- Short communication: genomic evaluations of final score for US Holsteins benefit from the inclusion of genotypes on cows. (2013) (31)
- Estimation of the dominance variance for postweaning gain in the U.S. Limousin population. (1998) (30)
- Alternative SNP weighting for single-step genomic best linear unbiased predictor evaluation of stature in US Holsteins in the presence of selected sequence variants. (2019) (30)
- Multiple-breed, multiple-traits evaluation of beef cattle in the Czech Republic (2003) (30)
- Application of single-step genomic evaluation using multiple-trait random regression test-day models in dairy cattle. (2019) (29)
- Evaluation of a multi-line broiler chicken population using a single-step genomic evaluation procedure. (2012) (29)
- Estimation of additive and nonadditive genetic variances in Hereford, Gelbvieh, and Charolais by Method R. (2001) (29)
- Dominance models with method R for stature of Holsteins. (1997) (29)
- Genotype by environment interaction for growth due to altitude in United States Angus cattle. (2012) (28)
- Genetic evaluations for growth heat tolerance in Angus cattle. (2016) (28)
- Genetics and genomics of reproductive disorders in Canadian Holstein cattle. (2019) (28)
- Quality Control of Genotypes Using Heritability Estimates of Gene Content at the Marker (2014) (28)
- Genetic (co)variances between wrinkle score and absence of breech strike in mulesed and unmulesed Merino sheep, using a threshold model (2010) (28)
- Evaluation of the utility of diagonal elements of the genomic relationship matrix as a diagnostic tool to detect mislabelled genotyped animals in a broiler chicken population. (2011) (28)
- Estimates of dispersion parameters and of genetic and environmental trends for weaning weight in Angus cattle using a maternal animal model with genetic grouping (1993) (27)
- Genetic evaluation of growth in a multibreed beef cattle population using random regression-linear spline models. (2008) (27)
- Joint evaluation of purebreds and crossbreds in swine. (2002) (26)
- Single-step genome-wide association for longitudinal traits of Canadian Ayrshire, Holstein, and Jersey dairy cattle. (2019) (26)
- Studies on inflation of GEBV in single-step GBLUP for type (2017) (26)
- Modeling missing pedigree in single-step genomic BLUP. (2019) (26)
- Effect of full sibs on additive breeding values under the dominance model for stature in United States Holsteins. (1998) (26)
- Influence of dominance relationships on the estimation of dominance variance with sire-dam subclass effects. (1997) (25)
- Genetic evaluation of calving to first insemination using natural and artificial insemination mating data. (2004) (25)
- Selection of core animals in the Algorithm for Proven and Young using a simulation model (2017) (25)
- Trends for conception rate of Holsteins over time in the southeastern United States. (2009) (25)
- Changes in genetic parameters for fitness and growth traits in pigs under genomic selection (2020) (25)
- Estimation of genetic parameters for mature weight in Angus cattle. (2011) (24)
- Use of a test day model for dairy goat milk yield across lactations in Germany. (2008) (23)
- Analysis of age-specific predicted transmitting abilities for final scores in Holsteins with a random regression model. (2002) (23)
- Continuous Genetic Evaluation of Holsteins for Type (1991) (23)
- Fertility traits in spring-calving Aberdeen Angus cattle. 2. Model comparison. (2007) (23)
- Comparison of genomic predictions for lowly heritable traits using multi-step and single-step genomic best linear unbiased predictor in Holstein cattle. (2018) (23)
- Validation of single‐step GBLUP genomic predictions from threshold models using the linear regression method: An application in chicken mortality (2020) (22)
- Genomic-polygenic evaluation of Angus-Brahman multibreed cattle for feed efficiency and postweaning growth using the Illumina 3K chip. (2012) (22)
- Estimates of parental-dominance and full-sib permanent environment variances in laying hens (2000) (22)
- Sexual dimorphism in livestock species selected for economically important traits. (2016) (21)
- Challenges of application of marker assisted selection - a review (2006) (21)
- Approximation of reliabilities for multiple-trait model with maternal effects. (2001) (21)
- Modeling response to heat stress in pigs from nucleus and commercial farms in different locations in the United States. (2016) (21)
- Technical note: Acceleration of sparse operations for average-information REML analyses with supernodal methods and sparse-storage refinements. (2015) (21)
- Accuracy of breeding values in small genotyped populations using different sources of external information-A simulation study. (2017) (21)
- Effects of breed and region on longevity traits through five years of age in Brown Swiss, Holstein, and Jersey cows in the United States. (2006) (21)
- Reaction norm for yearling weight in beef cattle using single-step genomic evaluation. (2018) (20)
- Comparison of lactational responses of dairy cows in Georgia and Israel to heat load and photoperiod (2002) (20)
- Technical note: Avoiding the direct inversion of the numerator relationship matrix for genotyped animals in single-step genomic best linear unbiased prediction solved with the preconditioned conjugate gradient. (2017) (20)
- Bias in heritability estimates from genomic restricted maximum likelihood methods under different genotyping strategies (2018) (19)
- Assigning unknown parent groups to reduce bias in genomic evaluations of final score in US Holsteins. (2014) (19)
- Accuracy of genomic BLUP when considering a genomic relationship matrix based on the number of the largest eigenvalues: a simulation study (2019) (19)
- Estimation of genetic parameters for birth weight, preweaning mortality, and hot carcass weight of crossbred pigs. (2013) (19)
- Short communication: genetic effects of heat stress on days open for Thai Holstein crossbreds. (2011) (19)
- Supercomputer for animal model evaluation of Ayrshire milk yield (1987) (19)
- Approximation of Reliability for Multiple-Trait Animal Models with Missing Data by Canonical Transformation (1996) (18)
- Regional differences in heat stress in U.S. Holsteins. (2006) (18)
- Modeling final scores in US Holsteins as a function of year of classification using a random regression model (2004) (18)
- Genetic evaluation of dairy goats for milk and fat yield with an animal model. (1988) (18)
- The empirical bias of estimates by restricted maximum likelihood, Bayesian method, and method R under selection for additive, maternal, and dominance models. (2001) (18)
- Prediction accuracy for a simulated maternally affected trait of beef cattle using different genomic evaluation models. (2013) (18)
- Longitudinal multiple-trait versus cumulative single-trait analysis of male and female fertility and hatchability in chickens. (2005) (18)
- Nonlinear Model for Describing Convergence of Iterative Methods of Variance Component Estimation (1986) (17)
- Short communication: Trends for monthly changes in days open in Holsteins. (2009) (17)
- Using single-step genomic best linear unbiased predictor to enhance the mitigation of seasonal losses due to heat stress in pigs. (2016) (17)
- Crossbred evaluations using single-step genomic BLUP and algorithm for proven and young with different sources of data1 (2019) (17)
- Influence of heritable social status on daily gain and feeding pattern in pigs. (2010) (16)
- Differences between genomic-based and pedigree-based relationships in a chicken population, as a function of quality control and pedigree links among individuals. (2014) (16)
- Genomic analysis of cow mortality and milk production using a threshold-linear model. (2017) (15)
- Study of codes of disposal at different parities of Large White sows using a linear censored model. (2005) (15)
- Genomic predictions for yield traits in US Holsteins with unknown parent groups. (2021) (15)
- Property of Trace in Restricted Maximum Likelihood Estimation of Variance Components (1990) (15)
- A recursive algorithm for decomposition and creation of the inverse of the genomic relationship matrix. (2012) (14)
- Genotype by environment interactions on culling rates and 305-day milk yield of Holstein cows in 3 US regions. (2015) (14)
- Beef trait genetic parameters based on old and recent data and its implications for genomic predictions in Italian Simmental cattle. (2020) (14)
- Genomic investigation of milk production in Italian buffalo (2021) (14)
- Genetic Evaluation using Unsymmetric Single Step Genomic Methodology with Large Number of Genotypes (2013) (13)
- Bias in genomic predictions by mating practices for linear type traits in a large-scale genomic evaluation. (2020) (13)
- Estimation of genetic covariances with method R. (2001) (13)
- Dominance and epistatic effects in genetic evaluation of farm animals (1995) (13)
- FAQ for genomic selection. (2011) (12)
- Correlations between purebred and crossbred body weight traits in Limousin and Limousin-Angus populations. (2015) (12)
- Genetic analysis of pig survival up to commercial weight in a crossbred population (2014) (12)
- Use of genomic recursions and algorithm for proven and young animals for single-step genomic BLUP analyses--a simulation study. (2015) (12)
- Prediction error variance and restricted maximum likelihood estimation for animal model with relationship grouping. (1989) (12)
- Estimation of correlation between maternal permanent environmental effects of related dams in beef cattle. (2005) (12)
- Estimation of genetic parameters of feed intake and daily gain in Durocs using data from electronic swine feeders. (2009) (12)
- Technical note: Impact of pedigree depth on convergence of single-step genomic BLUP in a purebred swine population. (2017) (11)
- Genomic predictions in purebreds with a multi-breed genomic relationship matrix. (2019) (11)
- Genomic-polygenic evaluation for ultrasound and weight traits in Angus–Brahman multibreed cattle with the Illumina3k chip (2013) (11)
- Use of serial pig body weights for genetic evaluation of daily gain. (2010) (11)
- Indirect predictions with a large number of genotyped animals using the algorithm for proven and young (2020) (11)
- Genetic analyses of stillbirth in relation to litter size using random regression models. (2010) (11)
- Method R Estimates of Heritability and Repeatability for Milk, Fat and Protein Yields of Japanese Holstein (2001) (10)
- Use of a single-step approach for integrating foreign information into national genomic evaluation in Holstein cattle. (2019) (10)
- Modeling honey yield, defensive and swarming behaviors of Italian honey bees (Apis mellifera ligustica) using linear-threshold approaches (2019) (10)
- Relationships among mortality, performance, and disorder traits in broiler chickens: a genetic and genomic approach (2018) (10)
- Proceedings from the 7th World Congress on Genetics Applied to Livestock Production (2002) (10)
- Technical note: Computing options for genetic evaluation with a large number of genetic markers. (2008) (10)
- Efficient approximation of reliabilities for single-step genomic best linear unbiased predictor models with the Algorithm for Proven and Young (2021) (9)
- Model for fitting longitudinal traits subject to threshold response applied to genetic evaluation for heat tolerance (2009) (9)
- Genomic prediction of growth traits for pigs in the presence of genotype by environment interactions using single-step genomic reaction norm model. (2020) (9)
- Trajectory of body weight of performance tested dual-purpose bulls (2018) (9)
- Simple preconditioners for the conjugate gradient method : experience with test day models (2002) (9)
- Comparison of Models for Missing Pedigree in Single-Step Genomic Prediction. (2021) (9)
- Estimation of regional genetic parameters for mortality and 305-d milk yield of US Holsteins in the first 3 parities. (2014) (9)
- Genotype by region and season interactions on weaning weight in United States Angus cattle. (2012) (9)
- Bias in genetic evaluations by records of cows treated with bovine somatotropin. (2000) (8)
- Effects of Inbreeding and Outbreeding in Purebred Hampshire and Duroc Swine (1997) (8)
- Accounting for Population Structure and Phenotypes From Relatives in Association Mapping for Farm Animals: A Simulation Study (2021) (8)
- Core-dependent changes in genomic predictions using the Algorithm for Proven and Young in single-step genomic best linear unbiased prediction (2020) (8)
- Estimation of Heritabilities and Genetic Correlations for Lifetime Production and First Lactation Traits of Holstein Cows in Japan (2002) (8)
- Genetic evaluation using single-step genomic BLUP in American Angus (2015) (8)
- Comparison of dystocia evaluations from sire and sire-maternal grandsire threshold models. (2002) (8)
- Emerging issues in genomic selection (2021) (8)
- Performances of Adaptive MultiBLUP, Bayesian regressions, and weighted-GBLUP approaches for genomic predictions in Belgian Blue beef cattle (2020) (7)
- Modeling pedigree accuracy and uncertain parentage in single-step genomic evaluations of simulated and US Holstein datasets. (2019) (7)
- GWAS using ssGBLUP (2014) (7)
- New applications of conformation trait data for dairy cow improvement (2005) (7)
- ISSUES IN GENETIC EVALUATION OF DAIRY CATTLE FOR HEAT TOLERANCE (2006) (7)
- Efficient computations of genomic relationship matrix and other matrices used in the single-step evaluation (2010) (7)
- Use of a random regression model to investigate changes in genetic parameters over time. (2002) (7)
- Shortage of quantitative geneticists in animal breeding. (2007) (7)
- Computing options for multiple-trait test-day random regression models while accounting for heat tolerance. (2009) (7)
- Invited review: Unknown-parent groups and metafounders in single-step genomic BLUP. (2021) (6)
- Methodology of evaluation for female fertility (2007) (6)
- Genotype by Environment Interactions in Commercial Populations (2012) (6)
- Genetic parameters for pregnancy rate in Holstein cattle under seasonal heat stress (2008) (6)
- Genetic grouping for direct and maternal effects with differential assignment of groups (1992) (6)
- Regional and seasonal analyses of weights in growing Angus cattle. (2016) (6)
- Genetic evaluation of growth in beef cattle with a random regression model. (2002) (6)
- Implementation of random regression models for large scale evaluations for growth in beef cattle. (2006) (6)
- Evaluation of methods for computing approximate accuracies of predicted breeding values in maternal random regression models for growth traits in beef cattle. (2008) (6)
- Investigating the persistence of accuracy of genomic predictions over time in broilers (2021) (6)
- Single-Step Genomic Evaluations with 570K Genotyped Animals in US Holsteins (2015) (6)
- Analyses of growth curves of Nellore cattle by Bayesian method via Gibbs sampling (2003) (6)
- Changes in genetic parameters for milk yield and heat tolerance in the Thai Holstein crossbred dairy population under different heat stress levels and over time. (2021) (5)
- Reducing computational cost of large-scale genomic evaluation by using indirect genomic prediction (2021) (5)
- Supply of genetic information--amount, format, and frequency. (1999) (5)
- Multibreed genomic evaluation for production traits of dairy cattle in the United States using single-step genomic best linear unbiased predictor. (2022) (5)
- Efficient inversion of genomic relationship matrix by the algorithm for proven and young (APY) (2015) (5)
- Single-step genomic BLUP for national beef cattle evaluation in US: from initial developments to final implementation (2018) (5)
- Changes in genomic predictions when new information is added (2021) (5)
- Genome Wide Association Study on Cow Mortality in Three US Regions (2014) (5)
- Joint longitudinal modeling of age of dam and age of animal for growth traits in beef cattle. (2005) (5)
- SOFTWARE PACKAGES IN ANIMAL BREEDING (2000) (5)
- Dissecting genetic trends to understand breeding practices in livestock: a maternal pig line example (2021) (4)
- Comparison of alternative computational procedures in BLUP sire evaluation (1985) (4)
- Optimal definition of contemporary groups for crossbred pigs in a joint purebred and crossbred genetic evaluation (2020) (4)
- Prior genetic architecture impacting genomic regions under selection: An example using genomic selection in two poultry breeds (2015) (4)
- Continuous genetic evaluation of dairy cattle. (1990) (4)
- Improving accuracy of direct and maternal genetic effects in genomic evaluations using pooled boar semen: a simulation study. (2019) (4)
- Modeling genetic differences of combined broiler chicken populations in single-step GBLUP (2021) (4)
- Acceleration of computations in AI REML for single-step GBLUP models (2014) (4)
- Estimation of changes of genetic parameters over time for type traits in Holsteins using random regression models. (2002) (4)
- 0406 Resilience and lessons from studies in genetics of heat stress. (2016) (4)
- Is genomic selection now a mature technology? (2016) (4)
- Studies on genetics of heat tolerance in Holsteins. (2002) (4)
- Legendre polynomials versus linear splines in the Canadian test-day model (2007) (4)
- 331 Efficient quality control methods for genomic and pedigree data used in routine genomic evaluation (2019) (4)
- Indirect genomic predictions for milk yield in crossbred Holstein-Jersey dairy cattle. (2021) (3)
- Possible causes of inflation in genomic evaluations for dairy cattle (2018) (3)
- Use of linear splines to simplify longitudinal analyses (2004) (3)
- Competitive genetic effects in Large White growing gilts. (2006) (3)
- Determining the stability of accuracy of genomic estimated breeding values in future generations in commercial pig populations (2021) (3)
- Genomic evaluation with multibreed and crossbred data (2022) (3)
- A comprehensive study on size and definition of the core group in the proven and young algorithm for single-step GBLUP (2022) (3)
- GENETICS AND BREEDING Multiple-Trait Estimation of Variance Components of Yield and Type Traits Using an Animal Model (1992) (3)
- Is single-step genomic REML with the algorithm for proven and young more computationally efficient when less generations of data are present? (2022) (3)
- Bayesian integration of external information into the single step approach for genomically enhanced prediction of breeding values (2012) (3)
- Technical note: Automatic scaling in single-step genomic BLUP. (2020) (3)
- Potential accuracy of genetic evaluation for calving difficulty with incomplete data on calving difficulty and/or birth weight using a bivariate threshold-linear animal model. (2001) (2)
- Genomic evaluation for harvest weight and residual carcass weight in channel catfish using single-step genomic BLUP (2018) (2)
- Threshold models with heterogeneous residual variance due to missing information (1988) (2)
- 208 Crossbred evaluations using single-step genomic BLUP and algorithm for proven and young with different sources of data (2019) (2)
- Exact p-values for large-scale single step genome-wide association, with an application for birth weight in American Angus (2019) (2)
- Limited dimensionality of genomic information and effective population size (2018) (2)
- Use of causative variants and SNP weighting in a single-step GBLUP context (2018) (2)
- 44 Accuracy of Genomic Predictions over Time in Broilers (2021) (2)
- Breeding and Genetics Symposium : Really Big Data : Processing and Analysis of Very Large Datasets (2011) (2)
- Erratum to: Incorporation of causative quantitative trait nucleotides in single-step GBLUP (2017) (2)
- Dimensionality of genomic information and performance of the Algorithm for Proven and Young for different livestock species (2016) (2)
- 0303 Issues in commercial application of single-step genomic BLUP for genetic evaluation in American Angus. (2016) (2)
- Dimensionality of genomic information and its impact on GWA and variant selection: a simulation study (2022) (2)
- 0337 Practical approximation of accuracy in genomic breeding values for a large number of genotyped animals. (2016) (2)
- Analyses of daily gains of performance tested dual-purpose bulls using Legendre polynomials and linear splines. (2006) (2)
- Clustering herds to minimize memory requirements of animal model programs. (1990) (2)
- On the equivalence between marker effect models and breeding value models and direct genomic values with the Algorithm for Proven and Young (2022) (2)
- 183 Optimum selection of core animals in the efficient inversion of the genomic relationship matrix. (2017) (2)
- Genetic variability of lactoferrin content predicted by MIR Spectrometry (2007) (2)
- Filling the Knowledge Gap: Integrating Quantitative Genetics and Genomics in Graduate Education and Outreach (2014) (2)
- Prinicpal components approach for estimating heritability of mid-infrared (MIR) spectrum in bovine milk (2007) (2)
- Detecting effective starting point of genomic selection by divergent trends from best linear unbiased prediction and single-step genomic best linear unbiased prediction in pigs, beef cattle, and broilers (2021) (2)
- Theoretical accuracy for indirect predictions based on SNP effects from single-step GBLUP (2022) (2)
- International bull evaluations by genomic BLUP with a prediction population. (2019) (2)
- Generating data in models including direct and maternal dominance effects. (2001) (1)
- Genetic parameters of the major fatty acid (FA) contents in cow milk (2007) (1)
- Approximation of genomic accuracies in single-step genomic evaluation (2011) (1)
- Past, present, and future developments in single-step genomic models (2022) (1)
- Impact of including the cause of missing records on genetic evaluations for growth in commercial pigs (2021) (1)
- 270. Single and multi-breed ssGBLUP using preselected variants from whole-genome sequence data in pigs (2022) (1)
- Changes in genetic trends in US dairy cattle since the implementation of genomic selection. (2022) (1)
- Validation of single-step genomic predictions using the linear regression method for milk yield and heat tolerance in a Thai-Holstein population (2021) (1)
- 0352 Genetics of heat stress in purebred and crossbred pigs from different states using BLUP or ssGBLUP (2016) (1)
- Improvements in dystocia national genetic evaluation system and data processing (2002) (1)
- Genetics of performance and disorder traits of broiler chicken. (2018) (1)
- Estimation and utilization of inbreeding and dominaxce genetic Effects in genetic evaluation of purebred american swine (1998) (1)
- Impact of blending the genomic relationship matrix with different levels of pedigree relationships or the identity matrix on genetic evaluations (2022) (1)
- 36 Effect of Blending and Tuning Relationship Matrices in Single-step Genomic BLUP (2021) (1)
- 0291 APY inverse of genomic relationship matrix–theory, analyses and questions (2016) (1)
- 327 Practical problems and solutions using unknown parent groups in combined commercial pig sub-lines. (2018) (1)
- Development of genomic predictions for Angus cattle in Brazil incorporating genotypes from related American sires (2022) (1)
- 668. How ssGBLUP became suitable for national dairy cattle evaluations (2022) (1)
- A comprehensive study on size and definition of the core group in the proven and young algorithm for single-step GBLUP (2022) (1)
- Covariance estimation with Method-R (2000) (1)
- Inversion algorithms in sparse matrix package FSPAK (1994) (1)
- 335 Genomic predictions with a multi-breed genomic relationship matrix (2019) (1)
- Evaluations for Final Score at Different Ages. Genetic Correlations of Pathogen-specific Clin- Ical Mastitis with Milk Yield and Somatic Cell Score. Y. De Genetic Evaluation of Episodes of Short and Long Duration of Elevated Somatic Cell Scores (2001) (1)
- Breeding Holsteins for different environments. (2006) (1)
- Reliabilities of estimated breeding values in models with metafounders (2023) (1)
- 31 Changes in genomic predictions when new data is included (2020) (1)
- 40 Factors Influencing Accuracy of Genomic Selection with Sequence Information (2021) (1)
- 0304 Single-step GBLUP using APY inverse for protein yield in U.S. Holstein with a large number of genotyped animals. (2016) (1)
- Technical note: adaptation of an animal-model method for approximation of reliabilities to a sire-maternal grandsire model. (2008) (1)
- Variation of lactoferrin content predicted by mid-infrared spectrometry (MIR) (2007) (1)
- Pre-selection bias and validation method in single-step GBLUP for production traits in US Holstein (2018) (1)
- Resilience and lessons from studies in genetics of heat stress 1 , 2 (2017) (1)
- Optimal definition of contemporary groups for crossbred pigs in a joint purebred and crossbred genetic evaluation. (2021) (0)
- Development of genomic predictions for harvest and carcass weight in channel catfish (2018) (0)
- 34 Dimensionality of Genomic Information and Its Impact on GWA and Variant Selection: A Simulation Study (2021) (0)
- Transformations of random regressions (2005) (0)
- 590. Changes in genetic parameters for traits under genomic selection in poultry (2022) (0)
- Genetic evaluation for heat tolerance in Angus cattle (2016) (0)
- 426. Changes in genetic trends for dairy cattle in the U.S. since the implementation of genomic selection (2022) (0)
- Genetic analysis of pig survival in a crossbred population (2013) (0)
- Use of Single Step GBLUP for Genomic Predictions and Genome-wide Association Studies (2013) (0)
- Publishing and literature search in the online era. (2022) (0)
- Genetic and environmental components of susceptibility to heat stress in Mediterranean dairy sheep. (2006) (0)
- Estimation of genetic parameters of somatic cell scores. (1990) (0)
- Optimization of methodology for genomic selection of moderate and large dairy cattle populations (2015) (0)
- Metafounders are related to Fst fixation indices and reduce bias in single-step genomic evaluations (2017) (0)
- Application of a crossbred model reveals additional genetic variation in reproduction traits of commercial females (2010) (0)
- 41 Using Sequence Data to Increase Accuracy of Genomic Predictions in Livestock: Are We There Yet? (2021) (0)
- Nonparallel genome changes within subpopulations over time contributed to genetic diversity within the US Holstein population. (2023) (0)
- 0292 Dimensionality of genomic information and APY inverse of genomic relationship matrix (2016) (0)
- Breeding and Genetics - Livestock and Poultry: Beef Cattle (2007) (0)
- Estimation of non-additive genetic variances and maternal inbreeding depression in Canadian Herefords (2000) (0)
- Genetic progress by selection and mating is based on prediction of the ability of the parents (2014) (0)
- Genomic BLUP including additive and dominant variation in purebreds and F1 crossbreds, with an application in pigs (2016) (0)
- Breeding and Genetics: Beef and meat species (2015) (0)
- Impact of sire birth weight potential on birth and weaning traits when mated to virgin heifers (2010) (0)
- Variance components for conception rates in US Holsteins with threshold random regression models using different editing criteria. (2006) (0)
- 294 Increased fluctuations of genetic evaluations with genomic information (2020) (0)
- 0353 Genetic evaluation for heat tolerance in growing Angus cattle. (2016) (0)
- 236. Investigating genetic redundancy as a source of genetic diversity and adaptability in the U.S. Holstein breed (2022) (0)
- Animal Breeding and Genetics animal breeding genetics , Introduction (2013) (0)
- Breeding and genetics: Genomic evaluation II - Applications (2016) (0)
- 699. Onset of heat stress and development of genomic predictions for heat tolerance in US Holsteins and Jerseys (2022) (0)
- On the equivalence between marker effect models and breeding value models and direct genomic values with the Algorithm for Proven and Young (2022) (0)
- Influence of Selection on Genomic Accuracies of Males and Females Using Male, Female or Joint Genotypes (2015) (0)
- A PRACTICAL LONGITUDINAL MODEL FOR EVALUATION OF GROWTH TRAITS by KELLY ROBBINS ( Under the Direction of Joseph Keith Bertrand and Ignacy Misztal (2005) (0)
- 669. Options for evaluating multiple breeds in a single-step GBLUP for US dairy population (2022) (0)
- 193 Including causative variants into single step genomic BLUP. (2017) (0)
- Tools for Genomic Analyses Using Single-Step Methodology (2012) (0)
- Capturing the opportunity of increased litter size in an integrated pork production business. (2006) (0)
- Dissecting genetic trends to understand breeding practices in livestock: a maternal pig line example (2021) (0)
- Breeding & Genetics: Statistical methods in animal breeding and genetics (2003) (0)
- 035 Advances in genomic selection and genomewide association. (2016) (0)
- 211 Changes in genetic parameters of fitness and growth traits under genomic selection in pigs (2019) (0)
- SNP profile for quantitative trait nucleotide in populations with small effective size and its impact on mapping and genomic predictions (2023) (0)
- UTILIZATION OF BY-PRODUCT FEEDS TO MAINTAIN ANIMAL PERFORMANCE WHILE DECREASING FEED COST IN POST-WEANING BEEF CATTLE DEVELOPMENT (2014) (0)
- 36 Exploring the Statistical Nature of Independent Chromosome Segments (2022) (0)
- Approximation of accuracies for breeding values with maternal effects in multiple traits animal models. (2000) (0)
- 209 Genomic selection for multiple maternal and growth traits in large white pigs using Single-Step GBLUP (2019) (0)
- 331 Accuracies of multi-breed genomic evaluations of breeds that share the same SNP effects. (2018) (0)
- 23 Sustainable Livestock Breeding with a Focus on Heat Stress (2022) (0)
- 35 Detecting Effective Starting Point of Genomic Selection by Divergent Trends from BLUP and ssGBLUP (2021) (0)
- Detecting effective starting point of genomic selection by divergent trends from BLUP and ssGBLUP in pigs, beef cattle, and broilers (2021) (0)
- 364. ACCF90GS2: software for fast approximation of reliabilities of estimated breeding values in single-step GBLUP (2022) (0)
- Advances in Genomic Selection and GWA (2016) (0)
- 366. Recent updates in the BLUPF90 software suite (2022) (0)
- 334 Investigating core-dependent changes in predictions using the algorithm for proven and young in ssGBLUP (2019) (0)
- Limited dimensionality of genomic information and implications for genomic prediction (2019) (0)
- 432. Efficient genetic progress for quantitative traits through genomic selection (2022) (0)
- Incorporation of causative quantitative trait nucleotides in single-step GBLUP (2017) (0)
- 384 Genetic and Genomic Analysis in Livestock with Increasing Datasets (2020) (0)
- Limited dimensionality of genomic information and implications on genomic selection (2019) (0)
- Acknowledgements to referees (2005) (0)
- Identifying influential sires and distinct clusters of selection candidates based on genomic relationships to reduce inbreeding in the US Holstein. (2022) (0)
- Modeling honey yield, defensive and swarming behaviors of Italian honey bees (Apis mellifera ligustica) using linear-threshold approaches (2019) (0)
- Erratum to: Incorporation of causative quantitative trait nucleotides in single-step GBLUP (2017) (0)
- 291. Decreasing computing cost of categorical data analysis (2022) (0)
- On the value of incorporating dominance effects in genetic evaluation of dairy cattle. (2002) (0)
- 332 Indirect predictions based on SNP effects from GBLUP with increasing number of genotyped animals (2019) (0)
- Estimation of genetic parameters for birth weight , preweaning mortality , and hot carcass weight of crossbred pigs 1 (2013) (0)
- Title: Ancestral Relationships Using Metafounders: Finite Ancestral Populations and across Population Relationships. 2 3 Running Title: Metafounders in Pedigrees (2015) (0)
- The improvement of lamb survival of Merino sheep as a correlated response to direct selection for rearing ability (2009) (0)
- Genetic evaluations for heat tolerance in meat animal species (2018) (0)
- Accuracy of genomic BLUP when considering a genomic relationship matrix based on the number of the largest eigenvalues: a simulation study (2019) (0)
- Working on a Method to Compute Inverse of Genomic Relationship Matrix from Sparse Matrices (2010) (0)
- Performances of Adaptive MultiBLUP, Bayesian regressions, and weighted-GBLUP approaches for genomic predictions in Belgian Blue beef cattle (2020) (0)
- The importance of historically popular sires on the accuracy of genomic predictions of young animals in the US Holstein population (2023) (0)
- 289. Definition of reliabilities for models with metafounders (2022) (0)
- 49 Current status of genomic selection (2019) (0)
- Genomic selection in poultry breeding using single-step genomic best linear unbiased prediction (2020) (0)
- Breeding and Genetics: Beef Cattle & Sheep Breeding (2009) (0)
- 25 Determining stability of genomic predictivity in future generations in commercial pig populations (2020) (0)
- Edinburgh Research Explorer Selection of core animals in the Algorithm for Proven and Young using a simulation model. (2017) (0)
- 211. Population structure of U.S. Holsteins allows for a snapshot of allele frequency changes and family specific SNPs (2022) (0)
- cattle Genotype by region and season interactions on weaning weight in United States Angus (2013) (0)
- PSXII-37 Validation of single-step GBLUP genomic predictions from threshold models using the linear regression method: an application in chicken mortality (2020) (0)
- Animal Genetics and Genomics Genomic predictions in purebreds with a multibreed genomic relationship matrix 1 (2019) (0)
- Utility of genomic relationship matrix to identify genotyping errors (2010) (0)
- Acknowledgements to referees (2012) (0)
- 35 Young Scholar Award Talk: Computing Strategies for National Beef Cattle Evaluations (2022) (0)
- Breeding and Genetics: Application and methods in animal breeding— Swine, poultry, and other species (2015) (0)
- Estimation of genetic parameters for birth weight, preweaning mortality, and hot carcass weight of crossbred pigs1 (2013) (0)
- A recursive method of approximation of the inverse of genomic relationships matrix (2011) (0)
- Extension of single-step ssGBLUP to many genotyped individuals (2018) (0)
- Breeding and Genetics: Genomic methods (2015) (0)
- Correction: Theoretical accuracy for indirect predictions based on SNP effects from single-step GBLUP (2023) (0)
- Using large-scale whole-genome sequence data for single-step genomic predictions in maternal and terminal pig lines (2022) (0)
- Breeding and Genetics: Advances in Genomic Methodology (2012) (0)
- FINDING THE BALANCE BETWEEN QUANTITATIVE AND GENOMICS ISSUES – A CASE OF A SINGLE-STEP GENOMIC evaluation ( ssGBLUP ) (2003) (0)
- Metafounders are Fst fixation indices and reduce bias in single step genomic evaluations (2016) (0)
- Breeding and Genetics : Beef Cattle Breeding I – Production Traits (2012) (0)
- Accuracy of estimated breeding values with genomic information on males, females, or both: an example on broiler chicken (2015) (0)
- The Promise of Genomics for Beef Improvement (2017) (0)
- 337. Updating the core animals in the algorithm for proven and young in the American Angus Association national evaluations (2022) (0)
- Frequentist p-values for large-scale-single step genome-wide association, with an application to birth weight in American Angus cattle (2019) (0)
- Estimation of genetic parameters for birth weight, pre-weaning mortality and hot carcass weight in a crossbred population of pigs (2012) (0)
- Breeding and Genetics: Genomic Methods and GWAS (2019) (0)
- Corrigendum to “Genetic analysis of pig survival up to commercial weight in a crossbred population” [Livest. Sci. 167C (2014) 19–24] (2015) (0)
- Breeding and Genetics: Molecular Biology and Genomics (2012) (0)
- 331. Investigating the impact of APY core size and definition in single-step GBLUP evaluations (2022) (0)
- Preconditioned conjugate gradient method by iteration on data for solving mixed model equations (2000) (0)
- Implication of the order of blending and tuning when computing the genomic relationship matrix in single‐step GBLUP (2022) (0)
- 184 Impact of SNP selection on genomic prediction for different reference population sizes (2017) (0)
- Optimal definition of contemporary groups for crossbred pigs in a joint purebred and crossbred genetic evaluation. (2021) (0)
- Studies on changes of estimated breeding values of U.S. Holstein bulls for final score from the first to second crop of daughters (2010) (0)
- 450 Plotting covariance functions from random regression models (2003) (0)
- Are Evaluations on Young Genotyped Dairy Bulls Benefiting from the Past Generations (2014) (0)
- Dimensionality of Genomic Information in Cattle and Other Species (2016) (0)
- 33 Impact of Including the Cause of Missing Records on Genetic Evaluations for Growth in Commercial Pigs (2021) (0)
- Breeding and Genetics II: Methodologies, Inbreeding, and Breeding Strategies (2018) (0)
- 295 Parameter estimation under genomic selection (2020) (0)
- 22 Accuracy of indirect predictions for large datasets based on prediction error covariance of SNP effects from single-step GBLUP (2020) (0)
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