James Mullins
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Researcher ORCID ID = 0000-0002-4461-8158
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Computer Science
James Mullins's Degrees
- PhD Computer Science Stanford University
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(Suggest an Edit or Addition)James Mullins's Published Works
Number of citations in a given year to any of this author's works
Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- CD8+ T-cell responses to different HIV proteins have discordant associations with viral load (2007) (1091)
- Consistent Viral Evolutionary Changes Associated with the Progression of Human Immunodeficiency Virus Type 1 Infection (1999) (994)
- Results at 1 year of outpatient multidisciplinary pulmonary rehabilitation: a randomised controlled trial (2000) (966)
- Dominant influence of HLA-B in mediating the potential co-evolution of HIV and HLA (2004) (858)
- Genetic relationships determined by a DNA heteroduplex mobility assay: analysis of HIV-1 env genes. (1993) (796)
- Photonic detection of bacterial pathogens in living hosts (1995) (665)
- Proliferation of cells with HIV integrated into cancer genes contributes to persistent infection (2014) (530)
- Persistence of HIV in gut-associated lymphoid tissue despite long-term antiretroviral therapy. (2008) (523)
- Towards an HIV cure: a global scientific strategy (2012) (520)
- Fitness Cost of Escape Mutations in p24 Gag in Association with Control of Human Immunodeficiency Virus Type 1 (2006) (515)
- Molecular Epidemiology of HIV Transmission in a Dental Practice (1992) (505)
- Improved Coreceptor Usage Prediction and GenotypicMonitoring of R5-to-X4 Transition by Motif Analysis of HumanImmunodeficiency Virus Type 1 env V3 LoopSequences (2003) (486)
- Increased HIV-1 vaccine efficacy against viruses with genetic signatures in Env-V2 (2012) (431)
- Cellular Immune Responses and Viral Diversity in Individuals Treated during Acute and Early HIV-1 Infection (2001) (429)
- Relationship between pre-existing viral reservoirs and the re-emergence of plasma viremia after discontinuation of highly active anti-retroviral therapy (2000) (411)
- Lethal mutagenesis of HIV with mutagenic nucleoside analogs. (1999) (362)
- Antibodies to cell membrane antigens associated with human T-cell leukemia virus in patients with AIDS. (1983) (336)
- Production of hepatitis B virus by a differentiated human hepatoma cell line after transfection with cloned circular HBV DNA (1986) (335)
- Evidence for Human Immunodeficiency Virus Type 1 Replication In Vivo in CD14+ Monocytes and Its Potential Role as a Source of Virus in Patients on Highly Active Antiretroviral Therapy (2002) (325)
- Human immunodeficiency virus type 1 evolution in vivo tracked by DNA heteroduplex mobility assays (1994) (322)
- Consistent Cytotoxic-T-Lymphocyte Targeting of Immunodominant Regions in Human Immunodeficiency Virus across Multiple Ethnicities (2004) (310)
- Genital HIV-1 RNA Predicts Risk of Heterosexual HIV-1 Transmission (2011) (294)
- Large-scale monitoring of host cell gene expression during HIV-1 infection using cDNA microarrays. (2000) (282)
- Founder Effects in the Assessment of HIV Polymorphisms and HLA Allele Associations (2007) (279)
- HIV-infected individuals receiving effective antiviral therapy for extended periods of time continually replenish their viral reservoir. (2005) (274)
- Transmission and accumulation of CTL escape variants drive negative associations between HIV polymorphisms and HLA (2005) (267)
- Acyclovir and transmission of HIV-1 from persons infected with HIV-1 and HSV-2. (2010) (257)
- Control of human immunodeficiency virus replication by cytotoxic T lymphocytes targeting subdominant epitopes (2006) (256)
- Compensatory Mutation Partially Restores Fitness and Delays Reversion of Escape Mutation within the Immunodominant HLA-B*5703-Restricted Gag Epitope in Chronic Human Immunodeficiency Virus Type 1 Infection (2007) (255)
- Multidrug-resistant human immunodeficiency virus type 1 strains resulting from combination antiretroviral therapy (1996) (248)
- Molecular cloning of a feline leukemia virus that induces fatal immunodeficiency disease in cats. (1988) (243)
- Genetic impact of vaccination on breakthrough HIV-1 sequences from the Step trial (2011) (229)
- Cellular Gene Expression upon Human Immunodeficiency Virus Type 1 Infection of CD4+-T-Cell Lines (2003) (218)
- Evidence that Low-Level Viremias during Effective Highly Active Antiretroviral Therapy Result from Two Processes: Expression of Archival Virus and Replication of Virus (2005) (215)
- ViroBLAST: a stand-alone BLAST web server for flexible queries of multiple databases and user's datasets (2007) (209)
- Changes in Human Immunodeficiency Virus Type 1 Fitness and Genetic Diversity during Disease Progression (2005) (208)
- Variable Fitness Impact of HIV-1 Escape Mutations to Cytotoxic T Lymphocyte (CTL) Response (2009) (207)
- Identification of three feline immunodeficiency virus (FIV) env gene subtypes and comparison of the FIV and human immunodeficiency virus type 1 evolutionary patterns (1994) (204)
- Sequence analysis and acute pathogenicity of molecularly cloned SIVSMM-PBj14 (1990) (202)
- Identification of human immunodeficiency virus type 1 envelope genes recombinant between subtypes B and F in two epidemiologically linked individuals from Brazil (1994) (200)
- Nucleotide sequences of a feline leukemia virus subgroup A envelope gene and long terminal repeat and evidence for the recombinational origin of subgroup B viruses (1986) (200)
- Decay of the HIV reservoir in patients receiving antiretroviral therapy for extended periods: implications for eradication of virus. (2007) (199)
- Slower evolution of human immunodeficiency virus type 1 quasispecies during progression to AIDS (1997) (196)
- Feline leukemia virus infection and diseases. (1991) (193)
- Estimating the Impact of Plasma HIV-1 RNA Reductions on Heterosexual HIV-1 Transmission Risk (2010) (189)
- HIV-1 Group M Conserved Elements Vaccine (2007) (188)
- Human Immunodeficiency Virus Type 1 Populations in Blood and Semen (1998) (185)
- The evolving molecular epidemiology of HIV‐1 envelope subtypes in injecting drug users in Bangkok, Thailand: implications for HIV vaccine trials (1995) (176)
- HIV Quasispecies and Resampling (1996) (175)
- Disease-specific and tissue-specific production of unintegrated feline leukaemia virus variant DNA in feline AIDS (1986) (175)
- Broad and Gag-Biased HIV-1 Epitope Repertoires Are Associated with Lower Viral Loads (2008) (174)
- DIVEIN: a web server to analyze phylogenies, sequence divergence, diversity, and informative sites. (2010) (174)
- Dual HIV-1 infection associated with rapid disease progression (2004) (172)
- Central Role of Reverting Mutations in HLA Associations with Human Immunodeficiency Virus Set Point (2008) (172)
- Strong sequence conservation among horizontally transmissible, minimally pathogenic feline leukemia viruses (1988) (169)
- Protection against lethal simian immunodeficiency virus SIVsmmPBj14 disease by a recombinant Semliki Forest virus gp160 vaccine and by a gp120 subunit vaccine (1996) (166)
- Control of Human Immunodeficiency Virus Type 1 Is Associated with HLA-B*13 and Targeting of Multiple Gag-Specific CD8+ T-Cell Epitopes (2007) (165)
- Genetic diversity of feline immunodeficiency virus: dual infection, recombination, and distinct evolutionary rates among envelope sequence clades (1997) (163)
- Equal plasma viral loads predict a similar rate of CD4+ T cell decline in human immunodeficiency virus (HIV) type 1- and HIV-2-infected individuals from Senegal, West Africa. (2002) (163)
- Cloning of HTLV-4 and its relation to simian and human immunodeficiency viruses (1987) (160)
- CD39/Adenosine Pathway Is Involved in AIDS Progression (2011) (159)
- Definition of the viral targets of protective HIV-1-specific T cell responses (2011) (157)
- Genetic analysis of human immunodeficiency virus type 1 and 2 (HIV-1 and HIV-2) mixed infections in India reveals a recent spread of HIV-1 and HIV-2 from a single ancestor for each of these viruses (1994) (156)
- A Reliable Phenotype Predictor for Human Immunodeficiency Virus Type 1 Subtype C Based on Envelope V3 Sequences (2006) (154)
- Simian immunodeficiency virus DNA vaccine trial in macaques (1996) (154)
- HLA Class I-Driven Evolution of Human Immunodeficiency Virus Type 1 Subtype C Proteome: Immune Escape and Viral Load (2008) (153)
- Nucleic acid sequence of an internal image-bearing monoclonal anti-idiotype and its comparison to the sequence of the external antigen. (1986) (153)
- Evolution of Hepatitis C Virus Quasispecies in Hypervariable Region 1 and the Putative Interferon Sensitivity-Determining Region during Interferon Therapy and Natural Infection (1998) (152)
- Genetic subtyping of human immunodeficiency virus using a heteroduplex mobility assay. (1995) (152)
- Phylogenetic Dependency Networks: Inferring Patterns of CTL Escape and Codon Covariation in HIV-1 Gag (2008) (152)
- Two Randomized Trials of Neutralizing Antibodies to Prevent HIV-1 Acquisition. (2021) (148)
- V3 region polymorphisms in HIV-1 from Brazil: prevalence of subtype B strains divergent from North American/European prototype and detection of subtype F. (1994) (148)
- Simian immunodeficiency virus-specific cytotoxic T-lymphocyte induction through DNA vaccination of rhesus monkeys (1996) (148)
- Enhanced Detection of Human Immunodeficiency Virus Type 1-Specific T-Cell Responses to Highly Variable Regions by Using Peptides Based on Autologous Virus Sequences (2003) (147)
- The genome organization of STLV-3 is similar to that of the AIDS virus except for a truncated transmembrane protein (1987) (147)
- Divergent patterns of progression to AIDS after infection from the same source: human immunodeficiency virus type 1 evolution and antiviral responses (1997) (146)
- Consensus and Ancestral State HIV Vaccines (2003) (144)
- Determination of HIV‐1 subtypes in injecting drug users in Bangkok, Thailand, using peptide‐binding enzyme immunoassay, and heteroduplex mobility assay: evidence of increasing infection with HIV‐1 subtype E (1995) (144)
- Quantitation of target molecules from polymerase chain reaction-based limiting dilution assays. (1997) (143)
- Polymorphisms of large effect explain the majority of the host genetic contribution to variation of HIV-1 virus load (2015) (140)
- Potential impact of recombination on sitewise approaches for detecting positive natural selection. (2003) (138)
- Selection on the Human Immunodeficiency Virus Type 1 Proteome following Primary Infection (2006) (136)
- Association Study of Common Genetic Variants and HIV-1 Acquisition in 6,300 Infected Cases and 7,200 Controls (2013) (133)
- Coalescent estimates of HIV-1 generation time in vivo. (1999) (132)
- Maintaining the integrity of human immunodeficiency virus sequence databases (1996) (128)
- CTL Responses of High Functional Avidity and Broad Variant Cross-Reactivity Are Associated with HIV Control (2012) (127)
- Duration of ruptured membranes and vertical transmission of HIV-1: a meta-analysis from 15 prospective cohort studies (2001) (125)
- Viral transduction of c-myc gene in naturally occurring feline leukaemias (1984) (122)
- Simian Immunodeficiency Virus DNA Vaccine Trial in Macaques (1995) (121)
- Transduction of endogenous envelope genes by feline leukaemia virus in vitro (1988) (119)
- Human Immunodeficiency Virus Type 1 Subtype B Ancestral Envelope Protein Is Functional and Elicits Neutralizing Antibodies in Rabbits Similar to Those Elicited by a Circulating Subtype B Envelope (2005) (117)
- Persistence of attenuated rev genes in a human immunodeficiency virus type 1-infected asymptomatic individual (1995) (113)
- Human Immunodeficiency Virus Type 1 Env Sequences from Calcutta in Eastern India: Identification of Features That Distinguish Subtype C Sequences in India from Other Subtype C Sequences (2001) (113)
- Nucleotide Sequence of the Envelope Gene of Gardner-Arnstein Feline Leukemia Virus B Reveals Unique Sequence Homologies with a Murine Mink Cell Focus-Forming Virus (1983) (112)
- HIV-Specific Probabilistic Models of Protein Evolution (2007) (112)
- Clinical and immunological impact of HIV envelope V3 sequence variation after starting initial triple antiretroviral therapy (2004) (111)
- Distinct determinants of human immunodeficiency virus type 1 RNA and DNA loads in vaginal and cervical secretions. (1998) (111)
- Conflicting selective forces affect T cell receptor contacts in an immunodominant human immunodeficiency virus epitope (2006) (110)
- Evolutionary Indicators of Human Immunodeficiency Virus Type 1 Reservoirs and Compartments (2003) (109)
- Genetic analysis of HIV-1 isolates from Brazil reveals presence of two distinct genetic subtypes. (1994) (108)
- Large-scale amplification, cloning and sequencing of near full-length HIV-1 subtype C genomes. (2006) (107)
- Human Immunodeficiency Virus Type 1 env Evolves toward Ancestral States upon Transmission to a New Host (2006) (107)
- Multiple Viral Genetic Analyses Detect Low-Level Human Immunodeficiency Virus Type 1 Replication during Effective Highly Active Antiretroviral Therapy (2003) (107)
- Nef Induces Multiple Genes Involved in Cholesterol Synthesis and Uptake in Human Immunodeficiency Virus Type 1-Infected T Cells (2005) (104)
- Antibodies to human T-cell leukemia virus membrane antigens (HTLV-MA) in hemophiliacs. (1983) (104)
- HIV-1 Envelope Subregion Length Variation during Disease Progression (2010) (102)
- Virus Population Homogenization following Acute Human Immunodeficiency Virus Type 1 Infection (2002) (100)
- Coping with Viral Diversity in HIV Vaccine Design (2007) (99)
- Molecular analysis and pathogenesis of the feline aplastic anemia retrovirus, feline leukemia virus C-Sarma (1986) (99)
- Viral genetic determinants of T-cell killing and immunodeficiency disease induction by the feline leukemia virus FeLV-FAIDS (1991) (99)
- Persistence of Extraordinarily Low Levels of Genetically Homogeneous Human Immunodeficiency Virus Type 1 in Exposed Seronegative Individuals (2003) (95)
- Viral evolution and escape during acute HIV-1 infection. (2010) (95)
- Viral Linkage in HIV-1 Seroconverters and Their Partners in an HIV-1 Prevention Clinical Trial (2011) (94)
- Demographic Processes Affect HIV-1 Evolution in Primary Infection before the Onset of Selective Processes (2011) (92)
- Influence of Random Genetic Drift on Human Immunodeficiency Virus Type 1 env Evolution During Chronic Infection (2004) (92)
- Rapid genetic characterization of HIV type 1 strains from four World Health Organization-sponsored vaccine evaluation sites using a heteroduplex mobility assay. WHO Network for HIV Isolation and Characterization. (1994) (91)
- Multiple-cohort genetic association study reveals CXCR6 as a new chemokine receptor involved in long-term nonprogression to AIDS. (2010) (91)
- Is the virulence of HIV changing? A meta-analysis of trends in prognostic markers of HIV disease progression and transmission (2012) (90)
- Compartmentalization of Human Immunodeficiency Virus Type 1 between Blood Monocytes and CD4+ T Cells during Infection (2004) (89)
- Evolution of Human Immunodeficiency Virus Type 1 Cytotoxic T-Lymphocyte Epitopes: Fitness-Balanced Escape (2007) (89)
- Env length and N-linked glycosylation following transmission of human immunodeficiency virus Type 1 subtype B viruses. (2008) (89)
- An Increasing Proportion of Monotypic HIV-1 DNA Sequences during Antiretroviral Treatment Suggests Proliferation of HIV-Infected Cells (2012) (87)
- Evolution of human immunodeficiency virus type 1 envelope sequences in infected individuals with differing disease progression profiles. (1998) (85)
- Emergence of multiclass drug-resistance in HIV-2 in antiretroviral-treated individuals in Senegal: implications for HIV-2 treatment in resouce-limited West Africa. (2009) (84)
- HIV Sequence Compendium 2010 (2010) (82)
- Multistage genomewide association study identifies a locus at 1q41 associated with rate of HIV-1 disease progression to clinical AIDS. (2010) (82)
- Distribution of HIV‐1 subtypes seen in an AIDS clinic in Sao Paulo City, Brazil (1996) (82)
- The U3 portion of feline leukemia virus DNA identifies horizontally acquired proviruses in leukemic cats. (1981) (81)
- Testing the Hypothesis of a Recombinant Origin of Human Immunodeficiency Virus Type 1 Subtype E (2000) (80)
- Sequence arrangement and biological activity of cloned feline leukemia virus proviruses from a virus-productive human cell line (1981) (77)
- Targeting of a CD8 T cell env epitope presented by HLA-B*5802 is associated with markers of HIV disease progression and lack of selection pressure. (2008) (77)
- A human immune data-informed vaccine concept elicits strong and broad T-cell specificities associated with HIV-1 control in mice and macaques (2015) (77)
- Genomewide Association Study for Determinants of HIV-1 Acquisition and Viral Set Point in HIV-1 Serodiscordant Couples with Quantified Virus Exposure (2011) (76)
- Identification of an env G subtype and heterogeneity of HIV‐1 strains in the Russian Federation and Belarus (1994) (76)
- Phylogenetic analysis of population-based and deep sequencing data to identify coevolving sites in the nef gene of HIV-1. (2010) (75)
- Selection for Human Immunodeficiency Virus Type 1 Recombinants in a Patient with Rapid Progression to AIDS (2002) (75)
- Mutation of HIV-1 Genomes in a Clinical Population Treated with the Mutagenic Nucleoside KP1461 (2011) (74)
- Dynamics of Viral Evolution and CTL Responses in HIV-1 Infection (2011) (74)
- Extensive Intrasubtype Recombination in South African Human Immunodeficiency Virus Type 1 Subtype C Infections (2007) (74)
- HIV Sequence Compendium 2018 (2018) (74)
- Lethal mutagenesis of HIV by mutagenic ribonucleoside analogs. (2000) (73)
- Pathogenic and host range determinants of the feline aplastic anemia retrovirus. (1988) (73)
- Genetic evaluation of suspected cases of transient HIV-1 infection of infants. (1998) (70)
- Functional comparison of transactivation by simian immunodeficiency virus from rhesus macaques and human immunodeficiency virus type 1 (1988) (67)
- HIV-1 variation before seroconversion in men who have sex with men: analysis of acute/early HIV infection in the multicenter AIDS cohort study. (2008) (67)
- Virus-Specific CD8+ T-Cell Responses Better Define HIV Disease Progression than HLA Genotype (2010) (66)
- Alpha interferon (2b) in combination with zidovudine for the treatment of presymptomatic feline leukemia virus-induced immunodeficiency syndrome (1990) (66)
- Differential Selection Pressure Exerted on HIV by CTL Targeting Identical Epitopes but Restricted by Distinct HLA Alleles from the Same HLA Supertype1 (2006) (63)
- Molecular cloning and characterization of endogenous feline leukemia virus sequences from a cat genomic library (1983) (63)
- Lack of Resistance to Integrase Inhibitors among Antiretroviral-Naive Subjects with Primary HIV-1 Infection, 2007–2013 (2015) (63)
- Compartmentalization of HIV-1 within the Female Genital Tract Is Due to Monotypic and Low-Diversity Variants Not Distinct Viral Populations (2009) (60)
- Reconstruction and Function of Ancestral Center-of-Tree Human Immunodeficiency Virus Type 1 Proteins (2007) (59)
- Rapid molecular epidemiology of human immunodeficiency virus transmission. (1995) (59)
- Selection against CpG dinucleotides in lentiviral genes: a possible role of methylation in regulation of viral expression. (1990) (59)
- Lymphocyte subset alterations and viral determinants of immunodeficiency disease induction by the feline leukemia virus FeLV-FAIDS (1990) (57)
- Male genital tract compartmentalization of human immunodeficiency virus type 1 (HIV). (2008) (57)
- Superior Control of HIV-1 Replication by CD8+ T Cells Targeting Conserved Epitopes: Implications for HIV Vaccine Design (2013) (57)
- Amino-Acid Co-Variation in HIV-1 Gag Subtype C: HLA-Mediated Selection Pressure and Compensatory Dynamics (2010) (56)
- Genital tract human immunodeficiency virus type 1 (HIV-1) shedding and inflammation and HIV-1 env diversity in perinatal HIV-1 transmission. (2000) (56)
- Simian immunodeficiency virus displays complex patterns of RNA splicing (1990) (56)
- Emerging genetic diversity of HIV-1 in South America (2000) (55)
- HIV-1 Superinfection in the Antiretroviral Therapy Era: Are Seroconcordant Sexual Partners at Risk? (2009) (54)
- Curiously Modern DNA for a ``250 Million-Year-Old'' Bacterium (2002) (54)
- Experimental Transmission and Pathogenesis of Immunodeficiency Syndrome in Cats (1987) (54)
- HIV-1 Conserved-Element Vaccines: Relationship between Sequence Conservation and Replicative Capacity (2013) (54)
- Genetic Characterization of Rebounding Human Immunodeficiency Virus Type 1 in Plasma during Multiple Interruptions of Highly Active Antiretroviral Therapy (2003) (53)
- Analysis of HLA A*02 Association with Vaccine Efficacy in the RV144 HIV-1 Vaccine Trial (2014) (53)
- Enhanced Detection of Human Immunodeficiency Virus Type 1 (HIV-1) Nef-Specific T Cells Recognizing Multiple Variants in Early HIV-1 Infection (2007) (53)
- Sequence organization of feline leukemia virus DNA in infected cells. (1980) (53)
- Monotypic Human Immunodeficiency Virus Type 1 Genotypes across the Uterine Cervix and in Blood Suggest Proliferation of Cells with Provirus (2009) (52)
- Altered Response Hierarchy and Increased T-Cell Breadth upon HIV-1 Conserved Element DNA Vaccination in Macaques (2014) (49)
- Virologic studies in a case of transfusion-associated AIDS. (1984) (49)
- Vaccine-induced Human Antibodies Specific for the Third Variable Region of HIV-1 gp120 Impose Immune Pressure on Infecting Viruses (2014) (49)
- Cytopathicity of Human Immunodeficiency Virus Type 1 Primary Isolates Depends on Coreceptor Usage and Not Patient Disease Status (2001) (49)
- Human immunodeficiency virus type 1 infection despite prior immunization with a recombinant envelope vaccine regimen. (1996) (49)
- Position and degree of mismatches and the mobility of DNA heteroduplexes. (2000) (48)
- Covariability of V3 loop amino acids. (1996) (48)
- Differential selection pressure exerted on HIV by CTL targeting identical epitopes but restricted by distinct HLA alleles from the same HLA supertype (2006) (48)
- Posttranslational modifications distinguish the envelope glycoprotein of the immunodeficiency disease-inducing feline leukemia virus retrovirus (1989) (48)
- EVOLUTION OF INTRAHOST HIV-1 GENETIC DIVERSITY DURING CHRONIC INFECTION (2006) (48)
- Mother-to-infant transmission of human immunodeficiency virus type 1 involving five envelope sequence subtypes (1997) (47)
- Evolution of HIV-1 CTL epitopes: Fitness-Balanced Escape (2007) (47)
- Immunogen sequence: the fourth tier of AIDS vaccine design (2004) (47)
- Human Immunodeficiency Virus Type 1 Bound to B Cells: Relationship to Virus Replicating in CD4+ T Cells and Circulating in Plasma (2002) (46)
- Complex Patterns of Protease Inhibitor Resistance among Antiretroviral Treatment-Experienced HIV-2 Patients from Senegal: Implications for Second-Line Therapy (2013) (46)
- Sieve analysis of breakthrough HIV-1 sequences in HVTN 505 identifies vaccine pressure targeting the CD4 binding site of Env-gp120 (2017) (45)
- Importance and detection of virus reservoirs and compartments of HIV infection. (2003) (45)
- Comprehensive Sieve Analysis of Breakthrough HIV-1 Sequences in the RV144 Vaccine Efficacy Trial (2015) (45)
- Evolution of CCR5 Use before and during Coreceptor Switching (2008) (44)
- HIV-1 dynamics in children. (1999) (44)
- Conserved HIV-1 epitopes continuously elicit subdominant cytotoxic T-lymphocyte responses. (2009) (44)
- HIV-1 p24gag Derived Conserved Element DNA Vaccine Increases the Breadth of Immune Response in Mice (2013) (43)
- Lack of Evidence for Changing Virulence of HIV-1 in North America (2008) (42)
- Blood monocytes harbor HIV type 1 strains with diversified phenotypes including macrophage-specific CCR5 virus. (2008) (42)
- Early pathogenesis of disease caused by SIVsmmPBj14 molecular clone 1.9 in macaques. (1993) (42)
- Evolution of a Simian Immunodeficiency Virus Pathogen (1998) (41)
- Feline leukemia virus subgroup C phenotype evolves through distinct alterations near the N terminus of the envelope surface glycoprotein. (1992) (41)
- HIV-1 infections with multiple founders are associated with higher viral loads than infections with single founders (2015) (40)
- HIV type 1 superinfection with a dual-tropic virus and rapid progression to AIDS: a case report. (2007) (40)
- Evidence for Limited Genetic Compartmentalization of HIV-1 between Lung and Blood (2009) (39)
- Primary subtype C HIV-1 infection in Harare, Zimbabwe. (1999) (39)
- Restriction of HIV-1 Genotypes in Breast Milk Does Not Account for the Population Transmission Genetic Bottleneck That Occurs following Transmission (2010) (39)
- Genetic Analyses of HIV-1 env Sequences Demonstrate Limited Compartmentalization in Breast Milk and Suggest Viral Replication within the Breast That Increases with Mastitis (2010) (38)
- HIV Sequence Compendium 2015 (2015) (38)
- Molecular epidemiology of dual HIV-1/HIV-2 seropositive adults from Senegal, West Africa. (2003) (38)
- Selective Induction of CTL Helper Rather Than Killer Activity by Natural Epitope Variants Promotes Dendritic Cell–Mediated HIV-1 Dissemination (2013) (38)
- Increased detection of HIV-specific T cell responses by combination of central sequences with comparable immunogenicity (2008) (37)
- Correlation between phosphorylated H1 histones and satellite DNAs in Drosophila virilis. (1978) (37)
- Cross-reactivity to human T-lymphotropic virus type III/lymphadenopathy-associated virus and molecular cloning of simian T-cell lymphotropic virus type III from African green monkeys. (1986) (37)
- Screening Low-Frequency SNPS From Genome-Wide Association Study Reveals a New Risk Allele for Progression to AIDS (2011) (36)
- Feline Immunodeficiency Virus Cell Entry (2001) (36)
- Three Main Mutational Pathways in HIV-2 Lead to High-Level Raltegravir and Elvitegravir Resistance: Implications for Emerging HIV-2 Treatment Regimens (2012) (35)
- HIV-1 Conserved Elements p24CE DNA Vaccine Induces Humoral Immune Responses with Broad Epitope Recognition in Macaques (2014) (35)
- Amplimers with 3'-terminal phosphorothioate linkages resist degradation by vent polymerase and reduce Taq polymerase mispriming. (1992) (35)
- An HIV Epidemic Model Based on Viral Load Dynamics: Value in Assessing Empirical Trends in HIV Virulence and Community Viral Load (2014) (35)
- Fidelity of SNP Array Genotyping Using Epstein Barr Virus-Transformed B-Lymphocyte Cell Lines: Implications for Genome-Wide Association Studies (2009) (34)
- Human immunodeficiency viruses appear compartmentalized to the female genital tract in cross-sectional analyses but genital lineages do not persist over time. (2013) (34)
- Cervical human immunodeficiency virus type 1 shedding is associated with genital beta-chemokine secretion. (1998) (34)
- Evolutionary dynamics of HIV-1 and the control of AIDS. (2006) (34)
- Human immunodeficiency virus in plasma and genital secretions during the menstrual cycle. (1996) (33)
- MRKAd5 HIV-1 Gag/Pol/Nef Vaccine-Induced T-Cell Responses Inadequately Predict Distance of Breakthrough HIV-1 Sequences to the Vaccine or Viral Load (2012) (33)
- Comprehensive epitope analysis of cross-clade Gag-specific T-cell responses in individuals with early HIV-1 infection in the US epidemic. (2007) (33)
- In vitro activity of dolutegravir against wild-type and integrase inhibitor-resistant HIV-2 (2015) (33)
- Experimental transmission and pathogenesis of immunodeficiency syndrome in cats. (1987) (33)
- Density-Dependent Decay in HIV-1 Dynamics (2006) (32)
- Toll-like receptor polymorphism associations with HIV-1 outcomes among sub-Saharan Africans. (2014) (32)
- Hematopoietic target cells of anemogenic subgroup C versus nonanemogenic subgroup A feline leukemia virus (1992) (31)
- Fitness-Balanced Escape Determines Resolution of Dynamic Founder Virus Escape Processes in HIV-1 Infection (2015) (31)
- Human immunodeficiency virus type 1 molecular evolution and the measure of selection. (1996) (31)
- Genetic analysis of viral variants selected in transmission of human immunodeficiency viruses to newborns. (2000) (31)
- Characterization and significance of delayed processing of the feline leukemia virus FeLV-FAIDS envelope glycoprotein (1990) (30)
- 12 – Heteroduplex Mobility Assays for Phylogenetic Analysis (1995) (30)
- Efficacy of an inactivated feline leukemia virus vaccine. (1996) (29)
- Additional member of the protein-tyrosine kinase family: the src- and lck-related protooncogene c-tkl. (1987) (29)
- DNA Prime-Boost Vaccine Regimen To Increase Breadth, Magnitude, and Cytotoxicity of the Cellular Immune Responses to Subdominant Gag Epitopes of Simian Immunodeficiency Virus and HIV (2016) (29)
- Preclinical evaluation of HIV-1 therapeutic ex vivo dendritic cell vaccines expressing consensus Gag antigens and conserved Gag epitopes. (2011) (29)
- In-depth single-cell analysis of translation-competent HIV-1 reservoirs identifies cellular sources of plasma viremia (2021) (28)
- Structure and pathogenicity of individual variants within an immunodeficiency disease-inducing isolate of FeLV. (1992) (28)
- Induction of aplastic anemia by intra-bone marrow inoculation of a molecularly cloned feline retrovirus. (1989) (28)
- Anti-HIV type 1 memory cytotoxic T lymphocyte responses associated with changes in CD4+ T cell numbers in progression of HIV type 1 infection. (1998) (28)
- Phenotypic susceptibility of HIV-2 to raltegravir: integrase mutations Q148R and N155H confer raltegravir resistance (2011) (28)
- How Often does Treatment of Primary HIV Lead to Post-Treatment Control? (2015) (27)
- Zidovudine in combination with alpha interferon and interleukin-2 as prophylactic therapy for FeLV-induced immunodeficiency syndrome (FeLV-FAIDS). (1990) (27)
- Fitness Costs of Mutations at the HIV-1 Capsid Hexamerization Interface (2013) (27)
- Distinct superinfection interference properties yet similar receptor utilization by cytopathic and noncytopathic feline leukemia viruses (1993) (27)
- Efficient amplification of HIV half-genomes from tissue DNA. (1992) (26)
- Presence of multiple HIV subtypes and a high frequency of subtype chimeric viruses in heterosexually infected women. (1999) (26)
- Protection against feline leukemia virus infection by use of an inactivated virus vaccine. (1991) (25)
- Clonal Expansion of Human Immunodeficiency Virus-Infected Cells and Human Immunodeficiency Virus Persistence During Antiretroviral Therapy. (2017) (25)
- Waiting times for the appearance of cytotoxic T-lymphocyte escape mutants in chronic HIV-1 infection. (2006) (24)
- SIVsmm infection of macaque and mangabey monkeys: correlation between in vivo and in vitro properties of different isolates. (1990) (24)
- Increased Breadth and Depth of Cytotoxic T Lymphocytes Responses against HIV-1-B Nef by Inclusion of Epitope Variant Sequences (2011) (24)
- No evidence for recombination between HIV type 1 and HIV type 2 within the envelope region in dually seropositive individuals from Senegal. (2004) (24)
- Recognition of HIV-1 Peptides by Host CTL Is Related to HIV-1 Similarity to Human Proteins (2007) (24)
- Molecular cloning and characterization of Antheraea mylitta cytoplasmic polyhedrosis virus genome segment 9. (2002) (24)
- Partner characteristics predicting HIV-1 set point in sexually acquired HIV-1 among African seroconverters. (2013) (24)
- Therapeutic conserved elements (CE) DNA vaccine induces strong T-cell responses against highly conserved viral sequences during simian-human immunodeficiency virus infection (2018) (24)
- Identification of a putative receptor for subgroup A feline leukemia virus on feline T cells (1992) (24)
- Early therapy of feline leukemia virus infection (FeLV-FAIDS) with 9-(2-phosphonylmethoxyethyl)adenine (PMEA). (1991) (24)
- Site-directed mutagenesis facilitated by DpnI selection on hemimethylated DNA. (2002) (24)
- HIV-2 Integrase Variation in Integrase Inhibitor-Naïve Adults in Senegal, West Africa (2011) (24)
- Analysis of a feline immunodeficiency virus provirus reveals patterns of gene sequence conservation distinct from human immunodeficiency virus type 1. (1995) (23)
- 4E10-Resistant HIV-1 Isolated from Four Subjects with Rare Membrane-Proximal External Region Polymorphisms (2010) (23)
- Disease progression and viral genome variants in experimental feline leukemia virus-induced immunodeficiency syndrome. (1991) (23)
- Approaches to the development of broadly protective HIV vaccines: challenges posed by the genetic, biological and antigenic variability of HIV-1: Report* from a meeting of the WHO-UNAIDS Vaccine Advisory Committee** Geneva, 21–23 February 2000 (2001) (22)
- FeLV-FAIDS-induced immunodeficiency syndrome in cats. (1989) (22)
- Colony forming T lymphocyte deficit in the development of feline retrovirus induced immunodeficiency syndrome. (1989) (21)
- Host Genetic and Viral Determinants of HIV-1 RNA Set Point among HIV-1 Seroconverters from Sub-Saharan Africa (2014) (21)
- Effective Cytotoxic T Lymphocyte Targeting of Persistent HIV-1 during Antiretroviral Therapy Requires Priming of Naive CD8+ T Cells (2016) (21)
- Interference with superinfection and with cell killing and determination of host range and growth kinetics mediated by feline leukemia virus surface glycoproteins (1993) (21)
- Indel and Carryforward Correction (ICC): a new analysis approach for processing 454 pyrosequencing data (2013) (21)
- Should patients with drug-resistant HIV-1 continue to receive antiretroviral therapy? (2001) (21)
- Rates of amino acid change in the envelope protein correlate with pathogenicity of primate lentiviruses (1993) (20)
- Prevalence, Magnitude, and Correlates of HIV-1 Genital Shedding in Women on Antiretroviral Therapy (2017) (20)
- Impact of Mutations in Highly Conserved Amino Acids of the HIV-1 Gag-p24 and Env-gp120 Proteins on Viral Replication in Different Genetic Backgrounds (2014) (20)
- Cloned genomic segments of Zea mays homologous to zein mRNAs. (1981) (20)
- Structure, origin, and transforming activity of feline leukemia virus-myc recombinant provirus FTT (1989) (19)
- Longitudinal and cross-sectional studies of HIV-1 RNA and DNA loads in blood and the female genital tract. (2004) (19)
- Substitution Model of Sequence Evolution for the Human Immunodeficiency Virus Type 1 Subtype B gp120 Gene over the C2-V5 Region (2001) (19)
- Analysis of FeLV-FAIDS provirus burden and productive infection in lymphocyte subsets in vivo. (1996) (18)
- Validation of an Oligonucleotide Ligation Assay for Quantification of Human Immunodeficiency Virus Type 1 Drug-Resistant Mutants by Use of Massively Parallel Sequencing (2014) (18)
- Site-directed mutagenesis using uracil-containing double-stranded DNA templates and DpnI digestion. (1999) (18)
- Increased Sequence Coverage through Combined Targeting of Variant and Conserved Epitopes Correlates with Control of HIV Replication (2013) (18)
- HIV Env conserved element DNA vaccine alters immunodominance in macaques (2017) (18)
- HIV-1 over time: fitness loss or robustness gain? (2007) (18)
- Cells producing residual viremia during antiretroviral treatment appear to contribute to rebound viremia following interruption of treatment (2020) (18)
- Plasma viral loads during early HIV-1 infection are similar in subtype C- and non-subtype C-infected African seroconverters. (2013) (18)
- Preferential detection of HIV subtype C' over subtype A in cervical cells from a dually infected woman. (2005) (17)
- Novel Cytotoxic T-Lymphocyte Escape Mutation by a Three-Amino-Acid Insertion in the Human Immunodeficiency Virus Type 1 p6Pol and p6Gag Late Domain Associated with Drug Resistance (2007) (17)
- Prevalence and genetic diversity of HIV type 1 subtypes A and D in women attending antenatal clinics in Uganda. (2007) (17)
- Comparison of Major and Minor Viral SNPs Identified through Single Template Sequencing and Pyrosequencing in Acute HIV-1 Infection (2015) (17)
- Conserved V3 loop sequences and transmission of human immunodeficiency virus type 1. (1994) (16)
- Dendritic Cells Reveal a Broad Range of MHC Class I Epitopes for HIV-1 in Persons with Suppressed Viral Load on Antiretroviral Therapy (2010) (16)
- Dendritic Cells Restore CD8+ T Cell Reactivity to Autologous HIV-1 (2014) (16)
- Differences in the expressed HLA class I alleles effect the differential clustering of HIV type 1-specific T cell responses in infected Chinese and caucasians. (2004) (16)
- Coverage of primary mother-to-child HIV transmission isolates by second-generation broadly neutralizing antibodies (2013) (16)
- Molecular clock-like evolution of human immunodeficiency virus type 1. (2004) (16)
- Performance of commonly used genotypic assays and comparison with phenotypic assays of HIV-1 coreceptor tropism in acutely HIV-1-infected patients. (2015) (15)
- Whole genome sequencing of extreme phenotypes identifies variants in CD101 and UBE2V1 associated with increased risk of sexually acquired HIV-1 (2017) (15)
- Molecular clones from a non-acutely pathogenic derivative of SIVsmmPBj14: characterization and comparison to acutely pathogenic clones. (1992) (14)
- RAPID COMMUNICATION Large-Scale Monitoring of Host Cell Gene Expression during HIV-1 Infection Using cDNA Microarrays (2000) (14)
- Adhesion and fusion efficiencies of human immunodeficiency virus type 1 (HIV-1) surface proteins (2013) (14)
- A sensitive real-time PCR based assay to estimate the impact of amino acid substitutions on the competitive replication fitness of human immunodeficiency virus type 1 in cell culture. (2013) (14)
- Patterns and rates of viral evolution in HIV-1 subtype B infected females and males (2017) (13)
- Lack of viral control and development of combination antiretroviral therapy escape mutations in macaques after bone marrow transplantation (2015) (13)
- Comparison of Immunogen Designs That Optimize Peptide Coverage: Reply to Fischer et al (2008) (13)
- HIV population-level adaptation can rapidly diminish the impact of a partially effective vaccine. (2018) (13)
- Improved Detection of Rare HIV-1 Variants using 454 Pyrosequencing (2013) (12)
- Gag and env conserved element CE DNA vaccines elicit broad cytotoxic T cell responses targeting subdominant epitopes of HIV and SIV Able to recognize virus-infected cells in macaques (2018) (12)
- No Time to Delay! Fiebig Stages and Referral in Acute HIV infection: Seattle Primary Infection Program Experience. (2018) (12)
- Rare HLA drive additional HIV evolution compared to more frequent alleles. (2009) (12)
- Treatment of FeLV-induced immunodeficiency syndrome (FeLV-FAIDS) with controlled release capsular implantation of 2',3'-dideoxycytidine. (1989) (12)
- HIV-1 subtype C is not associated with higher risk of heterosexual HIV-1 transmission: a multinational study among HIV-1 serodiscordant couples (2014) (12)
- A study of vaccine-induced immune pressure on breakthrough infections in the Phambili phase 2b HIV-1 vaccine efficacy trial. (2016) (12)
- Preinfection Human Immunodeficiency Virus (HIV)-Specific Cytotoxic T Lymphocytes Failed To Prevent HIV Type 1 Infection from Strains Genetically Unrelated to Viruses in Long-Term Exposed Partners (2009) (11)
- Satellite Ic: a possible link between the satellite DNAs of D. virilis and D. melanogaster (1979) (11)
- Cohort reporting improves hypertension care for refugees (2012) (11)
- In vitro erythrocytopathic activity of an aplastic anemia-inducing feline retrovirus. (1989) (11)
- Quality Score Based Identification and Correction of Pyrosequencing Errors (2013) (11)
- OA06-06 LB. Evidence of vaccine-induced changes in breakthrough HIV-1 strains from the Step trial (2009) (11)
- Persistence of low levels of simian immunodeficiency virus in macaques that were transiently viremic by conventional testing. (2004) (11)
- Feline leukemia virus-induced immunodeficiency syndrome in cats as a model for evaluation of antiretroviral therapy. (1989) (10)
- Predicting demographic group structures based on DNA sequence data. (2003) (10)
- Development and testing of an inactivated feline leukemia virus vaccine. (1995) (10)
- Mammalian cell/vaccinia virus expression vectors with increased stability of retroviral sequences in Escherichia coli: production of feline immunodeficiency virus envelope protein. (1995) (10)
- Breast milk and in utero transmission of HIV-1 select for envelope variants with unique molecular signatures (2017) (10)
- cDNA encoding a functional feline liver/bone/kidney-type alkaline phosphatase. (1995) (10)
- Spontaneous control of HIV-1 viremia in a subject with protective HLA-B plus HLA-C alleles and HLA-C associated single nucleotide polymorphisms (2014) (10)
- Mucosal T Helper 17 and T Regulatory Cell Homeostasis Correlate with Acute Simian Immunodeficiency Virus Viremia and Responsiveness to Antiretroviral Therapy in Macaques. (2019) (10)
- The impact of viral evolution and frequency of variant epitopes on primary and memory human immunodeficiency virus type 1-specific CD8⁺ T cell responses. (2014) (10)
- Increased mutations in Env and Pol suggest greater HIV-1 replication in sputum-derived viruses compared with blood-derived viruses (2009) (10)
- Sources of variation in ancestral sequence reconstruction for HIV-1 envelope genes (2006) (9)
- Factors affecting relative fitness measurements in pairwise competition assays of human immunodeficiency viruses. (2013) (9)
- Identification of low-level contamination of blood as basis for detection of human immunodeficiency virus (HIV) DNA in anti-HIV-negative specimens. (1994) (9)
- Control of SARS-CoV-2 infection after Spike DNA or Spike DNA+Protein co-immunization in rhesus macaques (2021) (9)
- Functional properties and epitope characteristics of T-cells recognizing natural HIV-1 variants. (2009) (9)
- Sampling designs for HIV molecular epidemiology with application to Honduras. (2005) (9)
- HIV pretreatment drug resistance among cisgender MSM and transgender women from Lima, Peru (2019) (9)
- Human immunodeficiency virus type 1 subtypes B and C detected in New Zealand. (1998) (9)
- Therapy of Presymptomatic FeLV‐Induced Immunodeficiency Syndrome with AZT in Combination with Alpha Interferon a (1990) (8)
- Compensatory Mutation Partially Restores Fitness and Delays Reversion of Escape Mutation within the Immunodominant HLA-B*5703-Restricted Gag Epitope in Chronic Human Immunodeficiency Virus Type 1 Infection (2008) (8)
- Curtailing the AIDS pandemic. (1997) (8)
- Neutralization titer biomarker for antibody-mediated prevention of HIV-1 acquisition (2022) (8)
- DNA Vaccine–Induced Long-Lasting Cytotoxic T Cells Targeting Conserved Elements of Human Immunodeficiency Virus Gag Are Boosted Upon DNA or Recombinant Modified Vaccinia Ankara Vaccination (2018) (8)
- CD8 and CD4 Epitope Predictions in RV144: No Strong Evidence of a T-Cell Driven Sieve Effect in HIV-1 Breakthrough Sequences from Trial Participants (2014) (8)
- Selective impairment of humoral immunity in feline leukemia virus-induced immunodeficiency. (1991) (8)
- Comment on "The Origins of Sexually Transmitted HIV Among Men Who Have Sex with Men" (2010) (8)
- Transmission of HIV-1 drug resistance mutations within partner-pairs: A cross-sectional study of a primary HIV infection cohort (2018) (8)
- Intra-host changes in Kaposi sarcoma-associated herpesvirus genomes in Ugandan adults with Kaposi sarcoma (2021) (7)
- Preparing for the availability of a partially effective HIV vaccine: some lessons from other licensed vaccines. (2011) (7)
- Variants in Host Viral Replication Cycle Genes Are Associated With Heterosexual HIV-1 Acquisition in Africans (2014) (7)
- Composite Sequence–Structure Stability Models as Screening Tools for Identifying Vulnerable Targets for HIV Drug and Vaccine Development (2015) (7)
- Viral evolution and escape during primary human immunodeficiency virus-1 infection: implications for vaccine design (2008) (7)
- A Pilot Study of Raltegravir Plus Combination Antiretroviral Therapy in Early Human Immunodeficiency Virus Infection: Challenges and Lessons Learned (2016) (7)
- Correction: Comparison of Immunogen Designs That Optimize Peptide Coverage: Reply to Fischer et al (2008) (7)
- The power of the media to shape perceptions of mental illness: James Mullins is impressed that powerful portrayals of psychiatric disorders, which foster a positive reaction in society, are now more prevalent (2014) (7)
- Natural history of SIVmac BK28 and H824 infection in Macaca nemestrina (1998) (6)
- Long-term experience and outcomes of programmatic antiretroviral therapy for HIV-2 infection in Senegal, West Africa. (2020) (6)
- Genital HIV-1 RNA Quantity Predicts Risk of Heterosexual HIV-1 Transmission (2011) (6)
- Replication kinetics and cell tropism of an immunosuppressive feline leukaemia virus. (1996) (6)
- Characteristics of a Pathogenic Molecular Clone of an End-Stage Serum-Derived Variant of Simian Immunodeficiency Virus (SIVF359) (2001) (5)
- Comparative immunogenicity of an mRNA/LNP and a DNA vaccine targeting HIV gag conserved elements in macaques (2022) (5)
- Antigen‐specific cytokine responses in vaccinated Macaca nemestrina (1999) (5)
- Erratum for Smith et al., Effective Cytotoxic T Lymphocyte Targeting of Persistent HIV-1 during Antiretroviral Therapy Requires Priming of Naive CD8+ T Cells (2016) (5)
- China registers success with TB-diabetes screening initiative (2012) (5)
- Pairwise Growth Competition Assay for Determining the Replication Fitness of Human Immunodeficiency Viruses (2015) (5)
- HIV-1 superinfection with a triple-class drug-resistant strain in a patient successfully controlled with antiretroviral treatment (2014) (5)
- 8th IAS Conference on HIV Pathogenesis, Treatment & Prevention 19–22 July 2015, Vancouver, Canada (2015) (5)
- CRISPR/Cas9-Mediated Insertion of HIV Long Terminal Repeat within BACH2 Promotes Expansion of T Regulatory–like Cells (2022) (4)
- Oral abstracts of the 21st International AIDS Conference 18–22 July 2016, Durban, South Africa (2016) (4)
- Proviral DNA Cloning (1990) (4)
- Droplet microfluidic sequencing of HIV genomes and integration sites (2020) (4)
- Methods used to examine compartmentalization of viral populations between the genital tract and peripheral blood. (2007) (4)
- The U 3 portion of feline leukemia virus DNA identifies horizontally acquired proviruses in leukemic cats ( long terminal repeat / proviral integration / virus-negative leukemia / virus-positive leukemia / DNA-mediated transfection ) (4)
- p21WAF1/CIP1 RNA Expression in Highly HIV-1 Exposed, Uninfected Individuals (2015) (4)
- Pathogenic mechanisms of immunodeficiency syndrome and aplastic anemia induced by feline leukemia viruses. (1990) (4)
- Generation and role of defective proviruses in cytopathic feline leukemia virus (FeLV-FAIDS) infections (1996) (4)
- Passive Transfer of HIV-1 Antibodies and Drug Resistant Virus during a Health Care Worker Accident: Implications for HCW Post-Exposure Management (2008) (4)
- P07-06. HIV-1 transmission and early evolution: whole genome analysis (2009) (4)
- T-cell based sieve analysis ties HLA A*02 to vaccine efficacy and IgA-C1 immune correlate in RV144 Thai trial (2012) (4)
- Oral abstracts of the 21st International AIDS Conference 18–22 July 2016, Durban, South Africa (2016) (4)
- Comparisons of Human Immunodeficiency Virus Type 1 Envelope Variants in Blood and Genital Fluids near the Time of Male-to-Female Transmission (2019) (3)
- Identifying and transferring offenders with mental health needs. (2012) (3)
- HIV transmission patterns among transgender women, their cisgender male partners, and cisgender MSM in Lima, Peru: A molecular epidemiologic and phylodynamic analysis (2021) (3)
- ISDB: a database toolkit for storing and analyzing viral integration site data (2018) (3)
- Droplet microfluidic sequencing of HIV proviruses with their integration sites in patients receiving antiretroviral therapy (2022) (3)
- Resistance detected by pyrosequencing following zidovudine monotherapy for prevention of HIV-1 mother-to-child-transmission (2015) (3)
- High-Sequence Diversity and Rapid Virus Turnover Contribute to Higher Rates of Coreceptor Switching in Treatment-Experienced Subjects with HIV-1 Viremia. (2016) (3)
- Presenting plasma HIV RNA level and rate of CD4 T-cell decline. (2007) (3)
- Mutations based on viral decay acceleration in the HIV-1 genomes of a clinical population treated with the mutagenic nucleoside KP1461 (2011) (3)
- OA01-06 LB. HIV-1 plasma RNA and risk of HIV-1 transmission (2009) (2)
- Re: Follow-up study of intrahost HIV type 2 variability reveals discontinuous evolution of C2V3 sequences. (2001) (2)
- P04-20. Humoral immune response in acute HIV-1 infection (2009) (2)
- Phylogenetic Analyses Comparing HIV Sequences from Plasma at Virologic Failure to Cervix Versus Blood Sequences from Antecedent Antiretroviral Therapy Suppression. (2019) (2)
- Simian Immunodeficiency VirusDisplays ComplexPatterns ofRNA Splicing (1990) (2)
- RV144 vaccine imprinting constrained HIV-1 evolution following breakthrough infection (2021) (2)
- CD101 genetic variants modify regulatory and conventional T cell phenotypes and functions (2021) (2)
- Transcomplementation of simian immunodeficiency virus Rev with human T-cell leukemia virus type I Rex (1993) (2)
- Droplet-microfluidics-assisted sequencing of HIV proviruses and their integration sites in cells from people on antiretroviral therapy (2022) (2)
- Track C Epidemiology and Prevention Science (2012) (1)
- DNA priming vaccination to induce T cell responses to subdominant conserved HIV epitopes (2020) (1)
- DNA vaccines expressing conserved elements provide potent and broad immune responses (2012) (1)
- HIV Transmission During Condomless Sex With a Seropositive Partner With Suppressed Infection. (2016) (1)
- UvA-DARE ( Digital Academic Repository ) CD 39 / Adenosine Pathway Is Involved in AIDS Progression (2011) (1)
- Evolution of Human Immunodeficiency Virus Type 1 Cytotoxic T-Lymphocyte Epitopes: Fitness-Balanced Escape (cid:1) (2007) (1)
- 13 – Simian Immunodeficiency Virus (SIV) from Old World Monkeys (1991) (1)
- The FeLV and SIV AIDS pathogenesis models: search for and analysis of molecularly defined pathogens. (1990) (1)
- 34 Novel conserved element HIV/SIV DNA vaccines maximize breadth and magnitude of immune response (2016) (1)
- Correction: Genomewide Association Study for Determinants of HIV-1 Acquisition and Viral Set Point in HIV-1 Serodiscordant Couples with Quantified Virus Exposure (2012) (1)
- Correction: Comprehensive Sieve Analysis of Breakthrough HIV-1 Sequences in the RV144 Vaccine Efficacy Trial (2016) (1)
- Reconstruction and function of Ancestral Center-Of-Tree ( COT ) HIV-I Proteins Running title : COT protein derivation and function (2007) (1)
- mulTI-cohorT GeneTIc assocIaTIon sTudy reVeals cXcr 6 as a new chemokIne recePTor InVolVed In aIds lonG-Term non-ProGressIon (2011) (1)
- P17-14. Fitness-informed HIV-1 Gag-p24 vaccine design (2009) (1)
- DNA vaccines expressing conserved elements provide potent and broad immune responses (2012) (1)
- HPTN 069/ACTG A5305: phase II study of maraviroc-containing regimens for HIV PrEP in US women; Postive impact of a randomized controlled trial of the Uthando Lwethu ("Our Love") intervention on rates of couples HIV testing in rural South Africa (2016) (1)
- HIV Quasispecies and Resampling (1996) (1)
- Track A Basic Science (2012) (1)
- Malawi breathes new life into childhood pneumonia care (2012) (1)
- Conflicting selective forces affect CD8 T-cell receptor contact sites in an HLA-A2 immunodominant HIV epitope. (2006) (1)
- Optimized SMRT-UMI protocol produces highly accurate sequence datasets from diverse populations – application to HIV-1 quasispecies (2023) (0)
- Vector Quantization of Amino Acids : Analysis of theHuman Immunode ciency Virus V 3 (2007) (0)
- Genome organization and sequence homology between human immunodeficiency virus and type 3 simian t lymphotrophic virus (1987) (0)
- Variants Promotes Dendritic Cell Than Killer Activity by Natural Epitope Selective Induction of CTL Helper Rather (2013) (0)
- Breast milk and in utero transmission of HIV-1 select for envelope variants with unique molecular signatures (2017) (0)
- HIV persistence despite reservoir decay during combinatorial immunotherapy including therapeutic conserved elements (CE) DNA vaccination, αPD-1 therapy, GS-986 TLR7-agonism, and CCR5 gene-edited CD4 T cell infusion in rhesus macaques (2019) (0)
- Correction: Whole genome sequencing of extreme phenotypes identifies variants in CD101 and UBE2V1 associated with increased risk of sexually acquired HIV-1 (2019) (0)
- Prototypical FeLV isolates for use as a disease model or vaccine (1989) (0)
- Faculty Opinions recommendation of Transmission of HIV-1 Gag immune escape mutations is associated with reduced viral load in linked recipients. (2008) (0)
- HIV-1 transmission linkage in an HIV-1 prevention clinical trial (2009) (0)
- CTL Escape and Codon Covariation in Subtypes B and C p17 (Matrix) and p24 (Capsid) Proteins (2008) (0)
- A Gut Reaction to SIV and SHIV Infection: Lower Dysregulation of Mucosal T Cells during Acute Infection Is Associated with Greater Viral Suppression during cART (2021) (0)
- HIV population-level adaptation can rapidly diminish the impact of a partially effective vaccine (2017) (0)
- P12-09. Immune responses in controlled and uncontrolled HIV infection to a designed HIV immunogen sequence focused on conserved regions of the viral genome (2009) (0)
- 125 The Dynamics of Early HIV Infection and a Consequent New Approach to Vaccine Design (2012) (0)
- Ugandan adults with Kaposi sarcoma (2022) (0)
- 175 HIV-1 Evolution in Primary Infection is Affected by Stochastic Followed by Selective Processes (2011) (0)
- Monotypic Human Immunodeficiency Virus Type 1 Genotypes across the Uterine Cervix and in Blood Suggest Proliferation of Cells with Provirus (cid:1) (2009) (0)
- Massively Parallel Sequencing Drug-Resistant Mutants by Use of Immunodeficiency Virus Type 1 Assay for Quantification of Human Validation of an Oligonucleotide Ligation (2014) (0)
- EVOLUTION OF INTRAHOST HIV ‐ 1 GENETIC DIVERSITY DURING CHRONIC INFECTION (2006) (0)
- Polymorphisms and HLA Allele Associations Founder Effects in the Assessment of HIV (2008) (0)
- G-109 Reverse vaccinology identified promising vaccine candidates focusing responses to relatively conserved regions associated with control of viremia (2014) (0)
- Molecular cloning and biological activity of human t cell lymphotropic virus type 4 (1987) (0)
- induced immunodeficiency syndrome Colony forming T lymphocyte deficit in the development of feline retrovirus (2011) (0)
- Genomic changes in Kaposi Sarcoma-associated Herpesvirus and their clinical correlates (2022) (0)
- Spontaneous control of HIV-1 viremia in a subject with protective HLA-B plus HLA-C alleles and HLA-C associated single nucleotide polymorphisms (2014) (0)
- In vitro activity of dolutegravir against wild-type and integrase inhibitor-resistant HIV-2 (2015) (0)
- Cellular Gene Expression upon Human Immunodeficiency Virus Type 1 Infection of CD4 (cid:1) -T-Cell Lines (2002) (0)
- during Interferon Therapy and Natural Infection Interferon Sensitivity-Determining Region Hypervariable Region 1 and the Putative Evolution of Hepatitis C Virus Quasispecies in (2013) (0)
- Inferring viral population structures using heteroduplex mobility and DNA sequence analyses. (2013) (0)
- NOTES Nef Induces Multiple Genes Involved in Cholesterol Synthesis and Uptake in Human Immunodeficiency Virus Type 1-Infected T Cells (2005) (0)
- TwinLink TM Plus Vip3A: Next Generation Insect Control from Bayer Trait Development (2014) (0)
- 1674Genomic Variation in Human Herpesvirus-8 and Implications for Pathogenesis of Kaposi Sarcoma: an analysis of GenBank sequences (2014) (0)
- HIV-1 selectively exploits cross-reactive CTL “help” to promote dysfunctional programming of pro-inflammatory dendritic cells (2012) (0)
- TUPDC0103: Gonorrhea infections diagnosed among persons living with HIV: cross matching surveillance registries to identify potential opportunities for integrated partner services-New York City, Washington D.C., Miami/Dade County and Arizona (2012) (0)
- A multidisciplinary approach to mental health care for prisoners: The anxiety often felt by young or first-time prisoners demands support by multiple agencies. James Mullins explains how a mental health inreach team can optimise stability for offenders (2012) (0)
- Lack of viral control and development of cART escape mutations in macaques after bone marrow transplantation (2015) (0)
- retrovirus. feline leukemia virus immunodeficiency envelope glycoprotein of the Posttranslational modifications distinguish the (2013) (0)
- Raspopovic modulated by morphogen gradients Digit patterning is controlled by a Bmp-Sox 9-Wnt Turing network (2014) (0)
- Exploitation of cross-reactive CTL “help” as a potential immune escape strategy for HIV-1 (P6201) (2013) (0)
- Tumor-specific changes in Kaposi sarcoma-associated herpesvirus genomes in Ugandan adults with Kaposi sarcoma (2020) (0)
- A human immune data-informed vaccine concept elicits strong and broad T-cell specificities associated with HIV-1 control in mice and macaques (2015) (0)
- the Same HLA Supertype but Restricted by Distinct HLA Alleles from HIV by CTL Targeting Identical Epitopes Differential Selection Pressure Exerted on (2006) (0)
- Homogeneous Noncompetitive Immunoassay Based on the Energy Transfer Between Fluoro-labeled Antibody Variable Domains ( Open Sandwich Fluoroimmunoassay ) (1999) (0)
- HIV Type 1 Superinfecion with a Dual-Tropic Virus and Rapid Progression to AIDS: A Case Report (2016) (0)
- Efficient ex vivo expansion of conserved element vaccine-specific CD8+ T-cells from SHIV-infected, ART-suppressed nonhuman primates (2023) (0)
- Functional Comparison ofTransactivation bySimian Immunodeficiency VirusfromRhesusMacaquesandHuman Immunodeficiency Virus Type1 (1988) (0)
- The Genetics of HIV-1 (2021) (0)
- A Novel T-cell Vaccine Eliciting T-cell Specificities Associated with Control of HIV-1 In Humans Is Highly Immunogenic in Mice and Macaques (2014) (0)
- P09-18. Cw*0303/0304 HIV specific CTL response toward GagYL9 select for HIV escape variants with low fitness that is compensated by intra-codon variation (2009) (0)
- Novel HIV DNA vaccine changes the immune hierarchy and elicits broad cytotoxic T cell responses targeting subdominant viral epitopes (2019) (0)
- mispriming.by vent polymerase and reduce Taq polymerase Amplimers with 3'-terminal phosphorothioate linkages resist (2012) (0)
- Baeten Genital HIV-1 RNA Predicts Risk of Heterosexual HIV-1 Transmission (2011) (0)
- HIV-1 selectively exploits cross-reactive CTL “help” to promote dysfunctional programming of pro-inflammatory dendritic cells (2012) (0)
- 2010-3-23 4 E 10-Resistant HIV-1 Isolated from Four Subjects with Rare Membrane-Proximal External Region Polymorphisms (2010) (0)
- Prevalence of hiv-1 subtypes in sao paulo city brasil (1994) (0)
- T-cell based sieve analysis ties HLA A*02 to vaccine efficacy and IgA-C1 immune correlate in RV144 Thai trial (2012) (0)
- Pharmacokinetic Serum Concentrations of VRC01 Correlate with Prevention of HIV-1 Acquisition (2022) (0)
- The following protocols describe PCR amplification and polyacrylamide gel electrophoresis conditions for subtype determination of HIV-1 envelope (env) sequences using heteroduplex mobility assay (0)
- Unexpected High Frequency of Reversion of Nef Mutations in HIV-1 (2007) (0)
- Safeguarding in prisons: Robust policies can protect offenders and members of the public in the community who are at risk, says James Mullins (2013) (0)
- Identification ofHumanImmunodeficiency VirusType1Envelope GenesRecombinant between Subtypes B andFinTwo Epidemiologically (1994) (0)
- Immune Competition of HIV Epitopes in Draining Lymph Nodes (2018) (0)
- Prototypical FeLV isolates for use as patterns of disease or vaccines. (1989) (0)
- PP 1.15 – 00095 Proviruses persisting during the initial years of suppressive ART are relatively stable in terms of genetic diversity, clonal composition, and inferred integration date distribution (2022) (0)
- contributes to persistent infection Proliferation of cells with HIV integrated into cancer genes (2014) (0)
- WHO-UNAIDS Guidelines for Standard HIV Isolation and Characterisation Procedures. (2002) (0)
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What Schools Are Affiliated With James Mullins?
James Mullins is affiliated with the following schools:
