James A Shapiro
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Researcher ORCID ID = 0000-0001-6933-2810
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James A Shapirobiology Degrees
Biology
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Genetics
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Biology
Why Is James A Shapiro Influential?
(Suggest an Edit or Addition)James A Shapiro's Published Works
Number of citations in a given year to any of this author's works
Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- Thinking about bacterial populations as multicellular organisms. (1998) (872)
- DNA: Insertion Elements, Plasmids, and Episomes. (1977) (845)
- Mobile Genetic Elements (1983) (553)
- BACTERIA AS MULTICELLULAR ORGANISMS (1988) (528)
- Molecular model for the transposition and replication of bacteriophage Mu and other transposable elements. (1979) (457)
- Why repetitive DNA is essential to genome function (2005) (284)
- Periodic phenomena in Proteus mirabilis swarm colony development (1996) (227)
- The significances of bacterial colony patterns (1995) (177)
- The galactose operon of E. coli K-12. II. A deletion analysis of operon structure and polarity. (1969) (156)
- Revisiting the Central Dogma in the 21st Century (2009) (155)
- Bacteria are small but not stupid: cognition, natural genetic engineering and socio-bacteriology. (2007) (151)
- Regulation of alkane oxidation in Pseudomonas putida (1975) (151)
- A 21st century view of evolution: genome system architecture, repetitive DNA, and natural genetic engineering. (2005) (122)
- Genome organization, natural genetic engineering and adaptive mutation. (1997) (119)
- The galactose operon of E. coli K-12. I. Structural and pleiotropic mutations of the operon. (1969) (119)
- Evolution: A View from the 21st Century (2011) (104)
- Observations on the formation of clones containing araB-lacZ cistron fusions (2004) (94)
- Kinetic model of Proteus mirabilis swarm colony development (1998) (92)
- Escherichia coli K-12 cell-cell interactions seen by time-lapse video (1989) (88)
- Natural genetic engineering in evolution (2004) (88)
- Genetic organization of the broad-host-range IncP-1 plasmid R751 (1980) (87)
- How life changes itself: the Read-Write (RW) genome. (2013) (85)
- Mobile DNA and evolution in the 21st century (2010) (83)
- Tn402: a new transposable element determining trimethoprim resistance that inserts in bacteriophage lambda (1977) (83)
- Organization of developing Escherichia coli colonies viewed by scanning electron microscopy (1987) (83)
- Transposable elements as the key to a 21st century view of evolution (2004) (79)
- Physiological function of the Pseudomonas putida PpG6 (Pseudomonas oleovorans) alkane hydroxylase: monoterminal oxidation of alkanes and fatty acids (1975) (77)
- Genome System Architecture and Natural Genetic Engineering in Evolution (1999) (73)
- High-molecular-weight polyethylene glycol prevents lethal sepsis due to intestinal Pseudomonas aeruginosa. (2004) (71)
- Transposition of the lac Region to the gal Region of the Escherichia coli Chromosome: Isolation of λlac Transducing Bacteriophages (1971) (70)
- Transposable genetic elements. (1980) (70)
- Starvation‐induced Mucts62‐mediated coding sequence fusion: a role for ClpXP, Lon, RpoS and Crp (1999) (66)
- TOL is a broad-host-range plasmid (1978) (64)
- How repeated retroelements format genome function (2005) (61)
- Adaptive mutation: who's really in the garden? (1995) (54)
- Differential activity of a transposable element in Escherichia coli colonies (1989) (53)
- Living Organisms Author Their Read-Write Genomes in Evolution (2017) (50)
- Sequential events in bacterial colony morphogenesis (1991) (50)
- Broad-host-range IncP-4 plasmid R1162: effects of deletions and insertions on plasmid maintenance and host range (1982) (49)
- Fractionation of inducible alkane hydroxylase activity in Pseudomonas putida and characterization of hydroxylase-negative plasmid mutations (1977) (48)
- A 21st Century View of Evolution (2002) (44)
- Insertion element analysis and mapping of the Pseudomonas plasmid alk regulon (1979) (42)
- Plasmid-determined alcohol dehydrogenase activity in alkane-utilizing strains of Pseudomonas putida (1976) (38)
- Isolation of inc P-2 plasmid DNA from Pseudomonas aeruginosa. (1978) (38)
- Genome Organization and Reorganization in Evolution (2002) (36)
- Transposition of a beta-lactamase locus from RP1 into Pseudomonas putida degradative plasmids (1977) (36)
- Scanning electron microscope study of Pseudomonas putida colonies (1985) (35)
- Action of a transposable element in coding sequence fusions. (1990) (34)
- Chromosomal location of the gene determining uridine diphoglucose formation in Escherichia coli K-12 (1966) (32)
- Genome Informatics: The Role of DNA in Cellular Computations (2006) (32)
- Regulatory mutations of the Pseudomonas plasmid alk regulon (1977) (31)
- Exploring the read-write genome: mobile DNA and mammalian adaptation (2017) (30)
- Components of intestinal epithelial hypoxia activate the virulence circuitry of Pseudomonas. (2005) (30)
- Regulation of membrane peptides by the Pseudomonas plasmid alk regulon (1979) (29)
- A role for the Clp protease in activating Mu-mediated DNA rearrangements (1993) (29)
- Expression of a synthetic gene encoding human insulin-like growth factor I in cultured mouse fibroblasts. (1987) (28)
- Differential fiu–lacZ fusion regulation linked to Escherichia coli colony development (1999) (28)
- Retrotransposons and regulatory suites. (2005) (28)
- Transposition of Tn7 in Pseudomonas aeruginosa and Isolation of alk::Tn7 Mutations (1979) (27)
- The basic concept of the read-write genome: Mini-review on cell-mediated DNA modification (2016) (26)
- No genome is an island: toward a 21st century agenda for evolution (2019) (26)
- Biological action in Read–Write genome evolution (2017) (26)
- Pattern and control in bacterial colony development. (1992) (25)
- Repetitive DNA, genome system architecture and genome reorganization. (2002) (24)
- Chromosomal integration of phage lambda by means of a DNA insertion element. (1978) (23)
- Plasmid transfer. (1994) (23)
- Control of Tn7 transposition (2004) (23)
- Rethinking the (im)possible in evolution. (2013) (22)
- Changes in gene order and gene expression. (1982) (21)
- The active role of spermatozoa in transgenerational inheritance (2019) (20)
- Different structures of selected and unselected araB‐lacZ fusions (1997) (20)
- Mechanisms of DNA reorganization in bacteria. (1985) (20)
- Differential action and differential expression of DNA polymerase I during Escherichia coli colony development (1992) (19)
- THE DISCOVERY AND SIGNIFICANCE OF MOBILE GENETIC ELEMENTS (1995) (19)
- Insertion and replication of the Pseudomonas aeruginosa mutator phage D3112 (2004) (18)
- Induction of alkane hydroxylase proteins by unoxidized alkane in Pseudomonas putida (1975) (18)
- All living cells are cognitive. (2020) (18)
- Genomes as smart systems (2004) (18)
- What prevents mainstream evolutionists teaching the whole truth about how genomes evolve? (2021) (16)
- Variation of beta-galactosidase expression from Mudlac elements during the development of Escherichia coli colonies. (1988) (16)
- Interactions of Tn7 and temperate phage F116L of Pseudomonas aeruginosa (2004) (16)
- Natural genetic engineering of the bacterial genome. (1993) (16)
- Epigenetic control of mobile DNA as an interface between experience and genome change (2014) (16)
- pλCM System: Observations on the Roles of Transposable Elements in Formation and Breakdown of Plasmids Derived from Bacteriophage Lambda Replicons (1983) (16)
- DNA insertion elements and the evolution of chromosome primary structure (1977) (15)
- Integration and excision of prophage lambda mediated by the IS 1 element. (1979) (14)
- Letting Escherichia coli Teach Me About Genome Engineering (2009) (14)
- Nothing in Evolution Makes Sense Except in the Light of Genomics: Read–Write Genome Evolution as an Active Biological Process (2016) (14)
- Physical structure, genetic content and expression of the alkBAC operon (2004) (12)
- Transposition of DNA inserted into deletions of the Tn5 kanamycin resistance element (1979) (10)
- Recombination involving transposable elements: on replicon fusion. (1981) (10)
- Programming of DNA rearrangements involving mu prophages. (1984) (10)
- How Chaotic Is Genome Chaos? (2021) (8)
- What can evolutionary biology learn from cancer biology? (2021) (8)
- CHAPTER 2 – Control of Pseudomonas putida Growth on Agar Surfaces (1986) (8)
- Physiology of the read–write genome (2014) (8)
- Observations on lysogeny in glutamic acid bacteria (1976) (6)
- Bacteria are small but not stupid 1 Bacteria are small but not stupid : Cognition , natural genetic engineering , and sociobacteriology (2006) (6)
- Thinking About Evolution in Terms of Cellular Computing (2005) (6)
- Pseudomonas hydrocarbon oxidation. (1984) (6)
- Constraint and opportunity in genome innovation (2013) (6)
- Barbara McClintock, 1902-1992. (1992) (5)
- Transposition and Rearrangements in Plasmid Evolution (1981) (5)
- Response to Denis Noble’s Article “The Illusions of the Modern Synthesis,” Biosemiotics (2021) (4)
- Perspectives for the genetic engineering of hydrocarbon oxidizing bacteria. (1982) (4)
- Genome System Architecture and Natural Genetic Engineering (2002) (4)
- Recombination involving transposable elements: role of target molecule replication in Tn1 delta Ap-mediated replicon fusion. (1983) (4)
- Reversal by DNA amplifications of an unusual mutation blocking alkane and alcohol utilization in Pseudomonas putida (2004) (4)
- What we have learned about evolutionary genome change in the past 7 decades (2022) (4)
- Genomic Reorganization in Cell Lineages (1983) (4)
- William Hayes: Pioneering Contributions Remembered (1995) (3)
- Perspectives for genetic engineering of hydrocarbon oxidizing bacteria. (1982) (3)
- A Twenty-First Century View of Evolution: Genome System Architecture, Repetitive DNA, and Natural Genetic Engineering (2007) (3)
- A MODEL FOR THE GENETIC ACTIVITY OF TRANSPOSABLE ELEMENTS INVOLVING DNA REPLICATION1 (1980) (3)
- GENETICS OF PLASMID-DETERMINED HYDROCARBON OXIDATION1 (1980) (2)
- Evolution by numbers (1983) (2)
- The p lambda CM system: phage immunity-specific incompatibility with IncP-1 plasmids. (1984) (2)
- Peeking in on prokaryotic genomes (2000) (2)
- The pλCM system: Phage immunity-specific incompatibility with IncP-1 plasmids (2004) (2)
- Response to Pauline Hogeweg’s review of my book, “Evolution: a view from the 21st century” (2012) (1)
- Induction ofAlkane Hydroxylase Proteins byUnoxidized Alkane inPseudomonas putida (1975) (1)
- Panel Discussion: Vulnerability of Ecosystems (1984) (1)
- Reply to Laurence A Moran’s review of Evolution: A View from the 21st Century (2012) (1)
- Insertion Element Analysis andMappingofthePseudomonas Plasmid alkRegulon (1979) (1)
- Sentencing Illegal Aliens Convicted of Reentry after Deportation: A Proposal for Simplified and Principled Sentencing (1996) (1)
- Part I. Summary (1999) (1)
- BRINGING CELL ACTION INTO EVOLUTION (2015) (1)
- Reply to comments Implications of the Read-Write Genome view (2013) (0)
- Panel Discussion: Comparison of Traditional and Genetic Strategies (1984) (0)
- Adaptive mutation. (1994) (0)
- Book Review:Methods in Microbiology. Volume 17: Plasmid Technology. P. M. Bennett, J. Grinsted (1986) (0)
- Bacterial phylogeny: evolution of prokaryotes. (1985) (0)
- Multicellular Organisms (2010) (0)
- Supplementary material from "Biological action in Read–Write genome evolution" (2017) (0)
- Molecular modelforthetransposition andreplication of bacteriophage Muandother transposable elements (1979) (0)
- Why the third way of evolution is necessary. (2021) (0)
- Cox sure? (1981) (0)
- Genome Evolution in the 21st Century (2006) (0)
- Peering into the Natural Genetic Engineering Toolbox (2002) (0)
- How should we think about evolution in the age of genomics? (2021) (0)
- The RW Genome, Epigenetics, Evolution and Pregnancy Extended abstract of the 3 rd Annual Robert G. Edwards lecture to The 20th (2014) (0)
- Acute Care SINS: Surgical Insights for the Non-surgeon - Chapter 8: Liver, Biliary System & Pancreatic SINS (2014) (0)
- Bacterial Phylogeny: Evolution of Prokaryotes . Karl H. Schleifer and Erko Stackebrandt, Eds. Academic Press, Orlando, Fla., 1985. x, 367 pp., illus. $30. From a symposium, Munich, Sept. 1984. (1985) (0)
- Repetitive DNA is Functional and Encodes Parts of the Non‐Coding RNA Repertoire (2022) (0)
- WHAT SYMBIONTS, PATHOGENS AND CELL FUSIONS TEACH US ABOUT EVOLUTION (2010) (0)
- Part I. Introduction (1999) (0)
- Physiology of the readâ•fiwrite genome (2014) (0)
- Recombination involving transposable elements : Role of target molecule replication in TnJAAp-mediated replicon fusion ( bacteriophage A / replicative recombination / TnpA activity ) (0)
- Transposable Elements Molecular Model for the Transposition and Replication of Bacteriophage Mu and other (2006) (0)
- Implications of the Read-Write Genome view. (2013) (0)
- Transposable elements as cloning vectors. Characterization of the Pseudomonas putida ALK-regulon (1984) (0)
- List of contributors (2021) (0)
- Response to Pauline Hogeweg’s review of my book, “Evolution: a view from the 21st century” (2012) (0)
- 306.4: Evaluation of a Low Dose Recombinant Collagenase and BP Protease for Clinical Islet Transplantation. (2021) (0)
- 7. Bringing Cell Action into Evolution (2020) (0)
- Elaine Dewar's Smarts–one journalist's search for the various meanings and mechanisms of natural and artificial intelligence (2015) (0)
- Choice of Law under the Federal Tort Claims Act: Richards and Renvoi Revisited (1992) (0)
- Elaine Dewar's Smarts-one journalist's search for the various meanings and mechanisms of natural and artificial intelligence. (2015) (0)
- Retroviruses and the RW Genome (2015) (0)
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What Schools Are Affiliated With James A Shapiro?
James A Shapiro is affiliated with the following schools:
