Jessica Kissinger
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American biologist and geneticist and researcher
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Biology
Jessica Kissinger's Degrees
- PhD Genetics University of California, Berkeley
- Bachelors Biology University of California, Berkeley
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Why Is Jessica Kissinger Influential?
(Suggest an Edit or Addition)According to Wikipedia, Jessica Kissinger is a Distinguished Research Professor at the Franklin College of Arts and Sciences, University of Georgia and director of the Institute of Bioinformatics. Her research focus is on the evolution, assembly and data curation of protozoan parasite genomes, particularly Cryptosporidium, Toxoplasma gondii and Plasmodium.
Jessica Kissinger's Published Works
Number of citations in a given year to any of this author's works
Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- MCScanX: a toolkit for detection and evolutionary analysis of gene synteny and collinearity (2012) (3052)
- PlasmoDB: a functional genomic database for malaria parasites (2008) (1033)
- TriTrypDB: a functional genomic resource for the Trypanosomatidae (2009) (842)
- ToxoDB: an integrated Toxoplasma gondii database resource (2007) (438)
- Nuclear-encoded, plastid-targeted genes suggest a single common origin for apicomplexan and dinoflagellate plastids. (2001) (422)
- Recent Expansion of Toxoplasma Through Enhanced Oral Transmission (2003) (368)
- PlasmoDB: the Plasmodium genome resource. A database integrating experimental and computational data (2003) (361)
- Adaptation of protein secretion to extremely high‐salt conditions by extensive use of the twin‐arginine translocation pathway (2002) (317)
- FungiDB: an integrated functional genomics database for fungi (2011) (291)
- GiardiaDB and TrichDB: integrated genomic resources for the eukaryotic protist pathogens Giardia lamblia and Trichomonas vaginalis (2008) (226)
- FungiDB: An Integrated Bioinformatic Resource for Fungi and Oomycetes (2018) (213)
- EuPathDB: the eukaryotic pathogen genomics database resource (2016) (202)
- Local admixture of amplified and diversified secreted pathogenesis determinants shapes mosaic Toxoplasma gondii genomes (2016) (200)
- ToxoDB: accessing the Toxoplasma gondii genome (2003) (199)
- Gene transfer in the evolution of parasite nucleotide biosynthesis. (2004) (189)
- Many gene and domain families have convergent fates following independent whole-genome duplication events in Arabidopsis, Oryza, Saccharomyces and Tetraodon. (2006) (181)
- PlasmoDB: The Plasmodium Genome Resource (2005) (181)
- The Plasmodium genome database (2002) (164)
- Origin, targeting, and function of the apicomplexan plastid. (1999) (155)
- Phylogenomic evidence supports past endosymbiosis, intracellular and horizontal gene transfer in Cryptosporidium parvum (2004) (153)
- CryptoDB: a Cryptosporidium bioinformatics resource update (2005) (151)
- Comparison of circumsporozoite proteins from avian and mammalian malarias: biological and phylogenetic implications. (1996) (151)
- Gene discovery in the apicomplexa as revealed by EST sequencing and assembly of a comparative gene database. (2003) (147)
- EuPathDB: a portal to eukaryotic pathogen databases (2009) (147)
- Identification of Diverse Archaeal Proteins with Class III Signal Peptides Cleaved by Distinct Archaeal Prepilin Peptidases (2006) (145)
- PlasmoDB: the Plasmodium genome resource. An integrated database providing tools for accessing, analyzing and mapping expression and sequence data (both finished and unfinished) (2002) (130)
- The Apicomplexan Whole-Genome Phylogeny: An Analysis of Incongruence among Gene Trees (2008) (121)
- Emergence of a group 3 coronavirus through recombination (2009) (117)
- VEuPathDB: the eukaryotic pathogen, vector and host bioinformatics resource center (2021) (114)
- Widespread distribution of antisense transcripts in the Plasmodium falciparum genome. (2004) (113)
- ApiDB: integrated resources for the apicomplexan bioinformatics resource center (2006) (113)
- Regulation and trafficking of three distinct 18 S ribosomal RNAs during development of the malaria parasite. (1997) (102)
- AVP2, a sequence-divergent, K(+)-insensitive H(+)-translocating inorganic pyrophosphatase from Arabidopsis. (2000) (98)
- A first glimpse into the pattern and scale of gene transfer in Apicomplexa. (2004) (96)
- AmoebaDB and MicrosporidiaDB: functional genomic resources for Amoebozoa and Microsporidia species (2010) (96)
- Chloroplast transit peptide prediction: a peek inside the black box. (2001) (95)
- Mining the Plasmodium genome database to define organellar function: what does the apicoplast do? (2002) (92)
- CryptoDB: the Cryptosporidium genome resource (2004) (91)
- Recombination in Avian Gamma-Coronavirus Infectious Bronchitis Virus (2011) (88)
- SchistoDB: a Schistosoma mansoni genome resource (2008) (88)
- EuPathDB: The Eukaryotic Pathogen database (2012) (87)
- Applied Genomics: Data Mining Reveals Species-Specific Malaria Diagnostic Targets More Sensitive than 18S rRNA (2011) (79)
- The Alveolate Perkinsus marinus: Biological Insights from EST Gene Discovery (2010) (79)
- The targets of the lytic antibody response against Trypanosoma cruzi. (2000) (75)
- piggyBac is an effective tool for functional analysis of the Plasmodium falciparum genome (2009) (71)
- Real-Time Loop-Mediated Isothermal Amplification (RealAmp) for the Species-Specific Identification of Plasmodium vivax (2013) (66)
- Sea urchin Hox genes: insights into the ancestral Hox cluster. (1996) (66)
- Jumbled Genomes: Missing Apicomplexan Synteny (2011) (64)
- The Genome of Haemoproteus tartakovskyi and Its Relationship to Human Malaria Parasites (2016) (60)
- Systems-Based Analysis of the Sarcocystis neurona Genome Identifies Pathways That Contribute to a Heteroxenous Life Cycle (2015) (60)
- Attenuated live vaccine usage affects accurate measures of virus diversity and mutation rates in avian coronavirus infectious bronchitis virus (2011) (55)
- A New Single-Step PCR Assay for the Detection of the Zoonotic Malaria Parasite Plasmodium knowlesi (2012) (55)
- Consistent and contrasting properties of lineage-specific genes in the apicomplexan parasites Plasmodium (2008) (55)
- Consistent and contrasting properties of lineage-specific genes in the apicomplexan parasites Plasmodium and Theileria (2008) (53)
- PlasmoDB: An integrative database of the Plasmodium falciparum genome. Tools for accessing and analyzing finished and unfinished sequence data. The Plasmodium Genome Database Collaborative. (2001) (53)
- A Genetically Tractable, Natural Mouse Model of Cryptosporidiosis Offers Insights into Host Protective Immunity (2019) (53)
- EuPathDB: The Eukaryotic Pathogen Genomics Database Resource. (2018) (50)
- Transport and trafficking: Toxoplasma as a model for Plasmodium. (1999) (47)
- A survey of the Leishmania major Friedlin strain V1 genome by shotgun sequencing: a resource for DNA microarrays and expression profiling. (2001) (46)
- Phylogenetic relationships among Brazilian Biomphalaria species (Mollusca: Planorbidae) based upon analysis of ribosomal ITS2 sequences (2000) (46)
- MicrobiomeDB: a systems biology platform for integrating, mining and analyzing microbiome experiments (2017) (44)
- Plasmodium cynomolgi infections in rhesus macaques display clinical and parasitological features pertinent to modelling vivax malaria pathology and relapse infections (2016) (43)
- SchistoDB: an updated genome resource for the three key schistosomes of humans (2012) (43)
- O-glycosylation in Toxoplasma gondii: identification and analysis of a family of UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferases. (2004) (42)
- SynView: a GBrowse-compatible approach to visualizing comparative genome data (2006) (38)
- PlasmoDB v5: new looks, new genomes. (2006) (38)
- Identification of putative cis-regulatory elements in Cryptosporidium parvum by de novo pattern finding (2007) (35)
- Standardized Metadata for Human Pathogen/Vector Genomic Sequences (2014) (35)
- Distinct amino acid and lipid perturbations characterize acute versus chronic malaria. (2019) (34)
- Metabolomics in the fight against malaria (2014) (33)
- PacBio assembly of a Plasmodium knowlesi genome sequence with Hi-C correction and manual annotation of the SICAvar gene family (2017) (33)
- Genome cartography: charting the apicomplexan genome. (2011) (32)
- Annotated draft genome sequences of three species of Cryptosporidium: Cryptosporidium meleagridis isolate UKMEL1, C. baileyi isolate TAMU-09Q1 and C. hominis isolates TU502_2012 and UKH1 (2016) (31)
- Strain-specific genome evolution in Trypanosoma cruzi, the agent of Chagas disease (2020) (31)
- High-Quality Genome Assembly and Annotation for Plasmodium coatneyi, Generated Using Single-Molecule Real-Time PacBio Technology (2016) (31)
- Evolutionary changes in sites and timing of actin gene expression in embryos of the direct- and indirect-developing sea urchins, Heliocidaris erythrogramma and H. tuberculata (1998) (31)
- MOLECULAR PHYLOGENETIC ANALYSIS OF THE AVIAN MALARIAL PARASITE PLASMODIUM (NOVYELLA) JUXTANUCLEARE (2002) (30)
- The Cryptosporidium parvum ApiAP2 gene family: insights into the evolution of apicomplexan AP2 regulatory systems (2014) (30)
- Analysis of the first and second internal transcribed spacer sequences of the ribosomal DNA in Biomphalaria tenagophila complex (Mollusca: Planorbidae). (2004) (29)
- Changes in nonstructural protein 3 are associated with attenuation in avian coronavirus infectious bronchitis virus (2011) (29)
- Genomics meets transgenics in search of the elusive Cryptosporidium drug target. (2004) (28)
- Noncoding RNAs in Apicomplexan Parasites: An Update. (2020) (25)
- Parasite genomics: current status and future prospects. (2001) (25)
- Ablation of an Ovarian Tumor Family Deubiquitinase Exposes the Underlying Regulation Governing the Plasticity of Cell Cycle Progression in Toxoplasma gondii (2017) (24)
- A 43-Nucleotide U-rich Element in 3′-Untranslated Region of Large Number of Trypanosoma cruzi Transcripts Is Important for mRNA Abundance in Intracellular Amastigotes* (2012) (24)
- TcruziKB: Enabling Complex Queries for Genomic Data Exploration (2008) (24)
- Rapid evolution in a conserved gene family. Evolution of the actin gene family in the sea urchin genus Heliocidaris and related genera. (1997) (23)
- A tale of three genomes: the kinetoplastids have arrived. (2006) (23)
- TcruziDB: an integrated, post-genomics community resource for Trypanosoma cruzi (2005) (22)
- Update on Cryptosporidium spp.: highlights from the Seventh International Giardia and Cryptosporidium Conference (2020) (21)
- Neglected Tropical Diseases in the Post-Genomic Era. (2015) (21)
- The strategies WDK: a graphical search interface and web development kit for functional genomics databases (2011) (21)
- Assembly of highly repetitive genomes using short reads: the genome of discrete typing unit III Trypanosoma cruzi strain 231 (2018) (21)
- Integrative analysis associates monocytes with insufficient erythropoiesis during acute Plasmodium cynomolgi malaria in rhesus macaques (2017) (18)
- Identification and functional characterization of cis-regulatory elements in the apicomplexan parasite Toxoplasma gondii (2009) (18)
- Genome-wide upstream motif analysis of Cryptosporidium parvum genes clustered by expression profile (2013) (17)
- A Glycosylphosphatidylinositol-Anchored Carbonic Anhydrase-Related Protein of Toxoplasma gondii Is Important for Rhoptry Biogenesis and Virulence (2017) (17)
- Malaria Diagnostics and Surveillance in the Post-Genomic Era (2013) (17)
- Humoral immunity prevents clinical malaria during Plasmodium relapses without eliminating gametocytes (2019) (17)
- ClinEpiDB: an open-access clinical epidemiology database resource encouraging online exploration of complex studies. (2019) (17)
- Analysis of Long Non-Coding RNA in Cryptosporidium parvum Reveals Significant Stage-Specific Antisense Transcription (2021) (16)
- A Vision for Health Informatics: Introducing the SKED Framework.An Extensible Architecture for Scientific Knowledge Extraction from Data (2017) (16)
- Phylogenetic analysis of haemosporinid parasites (apicomplexa: Haemosporina) and their coevolution with vectors and intermediate hosts (1997) (16)
- Plasmodium inui is not closely related to other quartan Plasmodium species. (1998) (16)
- TcruziDB: an integrated Trypanosoma cruzi genome resource (2004) (15)
- Comparative transcriptomics and metabolomics in a rhesus macaque drug administration study (2014) (15)
- Is reliance on an inaccurate genome sequence sabotaging your experiments? (2019) (14)
- Cryptosporidium hominis gene catalog: a resource for the selection of novel Cryptosporidium vaccine candidates (2016) (13)
- EuPathDB: a portal to eukaryotic pathogen databases. Nucleic acids research (2009) (12)
- A novel fragmented mitochondrial genome in the protist pathogen Toxoplasma gondii and related tissue coccidia (2020) (12)
- Long-read assembly and comparative evidence-based reanalysis of Cryptosporidium genome sequences reveal expanded transporter repertoire and duplication of entire chromosome ends including subtelomeric regions (2021) (11)
- Web Service Composition Using Service Suggestions (2011) (10)
- A Survey of Innovation through Duplication in the Reduced Genomes of Twelve Parasites (2014) (10)
- A Multiplex-PCR approach to identification of the Brazilian intermediate hosts of Schistosoma mansoni. (2002) (9)
- Adapting the Galaxy Bioinformatics Tool to Support Semantic Web Service Composition (2009) (9)
- Challenges for Cryptosporidium Population Studies (2021) (8)
- Evolution of Cryptosporidium (2019) (8)
- Building bioinformatics capacity in West Africa. (2007) (8)
- an integrated functional genomics database for fungi. (2011) (7)
- Web site evolution: Usability evaluation using Time Series Analysis of Selected Episode Graphs (2009) (7)
- ClinEpiDB: an open-access clinical epidemiology database resource encouraging online exploration of complex studies (2019) (6)
- A Comparison of Federated Databases with Web Services for the Integration of Bioinformatics Data (2007) (6)
- Clinical recovery of Macaca fascicularis infected with Plasmodium knowlesi (2021) (6)
- Practical Recommendations for Supporting a Systems Biology Cyberinfrastructure (2020) (6)
- From genome-scale data to models of infectious disease: A Bayesian network-based strategy to drive model development. (2015) (6)
- Accessing Cryptosporidium Omic and Isolate Data via CryptoDB.org. (2019) (5)
- Kissinger JC, Hahn JH, Raff RA. Rapid evolution in a conserved gene family. Evolution of the actin gene family in the sea urchin genus Heliocidaris and related genera. Mol Biol Evol 14: 654-665 (1997) (5)
- Suggestions for Galaxy Workflow Design Using Semantically Annotated Services (2012) (5)
- Long-read assembly and comparative evidence-based reanalysis of Cryptosporidium genome sequences reveal new biological insights (2021) (5)
- Toxoplasma as a Model Apicomplexan Parasite: Biochemistry, Cell Biology, Molecular Genetics, Genomics and Beyond (2000) (5)
- Proteomic and genomic approaches to understanding the 'power plant' of Cryptosporidium. (2009) (4)
- Addressing the gender gap in evolutionary biology. (1997) (4)
- Resistance to some, but not other dimeric lindenane sesquiterpenoid esters is mediated by mutations in a Plasmodium falciparum esterase. (2020) (4)
- Structure and evolution of CyI cytoplasmic actin-encoding genes in the indirect- and direct-developing sea urchins Heliocidaris tuberculata and Heliocidaris erythrogramma. (1995) (4)
- Running title : Regulation of mRNA abundance in T . cruzi A 43-nt Urich Element in the 3 ʹ′ Untranslated Region of a Large Number of Trypanosoma cruzi Transcripts is Important for mRNA Abundance in Intracellular Amastigotes * (2012) (3)
- Semi-Automatic Composition of Web Services for the Bioinformatics Domain (2008) (3)
- The Cryptosporidium parvum ApiAP 2 gene family : insights into the evolution of apicomplexan AP 2 regulatory systems (2014) (3)
- Correction to: Integrative analysis associates monocytes with insufficient erythropoiesis during acute Plasmodium cynomolgi malaria in rhesus macaques (2017) (3)
- ToxoDB: the functional genomic resource for Toxoplasma and related organisms (2020) (3)
- Evolution of the Apicomplexan Sugar Transporter Gene Family Repertoire (2017) (3)
- AVP 2 , a Sequence-Divergent , K 1-Insensitive H 1-Translocating Inorganic Pyrophosphatase from Arabidopsis 1 (2000) (3)
- WS-BioZard: A Wizard for Composing Bioinformatics Web Services (2008) (3)
- An Evaluation of Multiple Approaches for Federating Biological Data (2009) (3)
- Plasmodium knowlesi Cytoadhesion Involves SICA Variant Proteins (2022) (2)
- Suggestions in Galaxy Workflow Design Based on Ontologically Annotated Services (2012) (2)
- MaHPIC malaria systems biology data from Plasmodium cynomolgi sporozoite longitudinal infections in macaques (2022) (2)
- TriTrypDB: An integrated functional genomics resource for kinetoplastida (2023) (2)
- An evolutionary approach to identify potentially protective B cell epitopes involved in naturally acquired immunity to malaria and the role of EBA-175 in protection amongst denizens of Bolifamba, Cameroon (2016) (2)
- Enriching the Ontology for Biomedical Investigations (OBI) to Improve its Suitability for Web Service Annotations (2011) (2)
- Enrichment of Cryptosporidium parvum from in vitro culture as measured by total RNA and subsequent sequence analysis. (2018) (1)
- Cryptosporidium: Comparative Genomics and Pathogenesis (2013) (1)
- Genome Sequence for the Apicomplexan Sarcosystis neurona (2012) (1)
- Comparative genomics on avian coronaviruses; origin and divergence associated with host and pathogenic shifts. (2009) (1)
- Toxoplasma gondii: A Model for Evolutionary Genomics and Chemotherapy (2002) (1)
- MaHPIC: Host M. mulatta infected with P. cynomolgi (2017) (1)
- An Evaluation of Multiple Approaches For Database Federation in Life Science (2007) (1)
- Protective Immunity in a Genetically Tractable Natural Mouse Model of Cryptosporidiosis (2019) (1)
- Functional motif analysis for glycosyltransferases in apicomplexan genomes (608.5) (2014) (0)
- Decision letter: A single-parasite transcriptional atlas of Toxoplasma Gondii reveals novel control of antigen expression (2020) (0)
- Changes in nonstructural protein 3 are associated with attenuation in avian coronavirus infectious bronchitis virus (2011) (0)
- An evolutionary approach to identify potentially protective B cell epitopes involved in naturally acquired immunity to malaria and the role of EBA-175 in protection amongst denizens of Bolifamba, Cameroon (2016) (0)
- IDENTIFICATION OF ARCHAEAL PROTEINS WITH CLASS III SIGNAL PEPTIDES INDICATES THE PRESENCE OF DIVERSE CELL-SURFACE STRUCTURES IN THIS DOMAIN (2018) (0)
- Evolution of Cryptosporidium (2019) (0)
- Title FungiDB : An integrated functional genomics database for fungi Permalink (2011) (0)
- Small and intermediate size structural RNAs in the unicellular parasite Cryptosporidium parvum as revealed by sRNA-seq and comparative genomics (2022) (0)
- Integrative analysis associates monocytes with insufficient erythropoiesis during acute Plasmodium cynomolgi malaria in rhesus macaques (2017) (0)
- Correction to: Accessing Cryptosporidium Omic and Isolate Data via CryptoDB.org. (2020) (0)
- List of contributors (2020) (0)
- Integration and use of Schistosoma mansoni genomic data towards the identification of candidate therapeutic targets (2009) (0)
- Correction to: Integrative analysis associates monocytes with insufficient erythropoiesis during acute Plasmodium cynomolgi malaria in rhesus macaques (2017) (0)
- ToxoDB: an integrated genomic database for the study of Toxoplasma gondii and Neospora caninum (2011) (0)
- Identification of Diverse Archaeal Proteins with Class III Signal Peptides Cleaved by Distinct Archaeal Prepilin Peptidases (cid:1) † (2007) (0)
- THE TOXOPLASMA GONDII VACUOLAR PROTON ATPASE: CHARACTERIZATION OF TWO PROTON-TRANSLOCATING SUBUNITS by ROXANA CINTRON-MORET (2011) (0)
- Malaria disrupts the rhesus macaque gut microbiome (2023) (0)
- Stage-Specific Long Non-coding RNAs in Cryptosporidium parvum as Revealed by Stranded RNA-Seq (2020) (0)
- Clinical recovery of Macaca fascicularis infected with Plasmodium knowlesi (2021) (0)
- Developing new drugs and vaccines for schistosomiasis (2011) (0)
- Genome-wide upstream motif analysis of Cryptosporidium parvum genes clustered by expression profile (2013) (0)
- Philosophical Transactions of the Royal Society of London. Series B: Biological Sciences: 357 (1417) (2002) (0)
- An unsettling picture emerges from population genomic studies of Plasmodium vivax (2016) (0)
- Session II : The Human Microbiome and Metagenomics (2018) (0)
- Plasmodium cynomolgi infections in rhesus macaques display clinical and parasitological features pertinent to modelling vivax malaria pathology and relapse infections (2016) (0)
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What Schools Are Affiliated With Jessica Kissinger?
Jessica Kissinger is affiliated with the following schools:
