Joachim Kopka
#151,183
Most Influential Person Now
Researcher
Joachim Kopka's AcademicInfluence.com Rankings
Joachim Kopkacomputer-science Degrees
Computer Science
#7966
World Rank
#8382
Historical Rank
Machine Learning
#3130
World Rank
#3169
Historical Rank
Artificial Intelligence
#3429
World Rank
#3479
Historical Rank
Database
#5020
World Rank
#5215
Historical Rank
Download Badge
Computer Science
Why Is Joachim Kopka Influential?
(Suggest an Edit or Addition)Joachim Kopka's Published Works
Number of citations in a given year to any of this author's works
Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- Proposed minimum reporting standards for chemical analysis (2007) (3098)
- Metabolite profiling for plant functional genomics (2000) (1963)
- Gas chromatography mass spectrometry–based metabolite profiling in plants (2006) (1713)
- GMD@CSB.DB: the Golm Metabolome Database (2005) (1183)
- Simultaneous analysis of metabolites in potato tuber by gas chromatography-mass spectrometry. (2000) (1081)
- Exploring the Temperature-Stress Metabolome of Arabidopsis1[w] (2004) (742)
- Potential of metabolomics as a functional genomics tool. (2004) (738)
- Comprehensive metabolic profiling and phenotyping of interspecific introgression lines for tomato improvement (2006) (726)
- GC–MS libraries for the rapid identification of metabolites in complex biological samples (2005) (623)
- Identification of uncommon plant metabolites based on calculation of elemental compositions using gas chromatography and quadrupole mass spectrometry. (2000) (535)
- TagFinder for the quantitative analysis of gas chromatography - mass spectrometry (GC-MS)-based metabolite profiling experiments (2008) (509)
- Metabolomics of temperature stress. (2007) (480)
- Mass appeal: metabolite identification in mass spectrometry-focused untargeted metabolomics (2013) (452)
- Transcript and metabolite profiling during cold acclimation of Arabidopsis reveals an intricate relationship of cold-regulated gene expression with modifications in metabolite content. (2007) (408)
- Systems Rebalancing of Metabolism in Response to Sulfur Deprivation, as Revealed by Metabolome Analysis of Arabidopsis Plants1[w] (2005) (371)
- Downregulation of Cinnamoyl-Coenzyme A Reductase in Poplar: Multiple-Level Phenotyping Reveals Effects on Cell Wall Polymer Metabolism and Structure[W] (2007) (364)
- Priming and memory of stress responses in organisms lacking a nervous system (2016) (321)
- Phosphorus Stress in Common Bean: Root Transcript and Metabolic Responses1[W][OA] (2007) (317)
- Parallel analysis of transcript and metabolic profiles: a new approach in systems biology (2003) (309)
- Decision tree supported substructure prediction of metabolites from GC-MS profiles (2010) (301)
- Global changes in transcription orchestrate metabolic differentiation during symbiotic nitrogen fixation in Lotus japonicus. (2004) (298)
- Plant metabolomics reveals conserved and divergent metabolic responses to salinity. (2007) (293)
- Construction and application of a mass spectral and retention time index database generated from plant GC/EI-TOF-MS metabolite profiles. (2003) (286)
- A proposed framework for the description of plant metabolomics experiments and their results (2004) (278)
- Comprehensive Dissection of Spatiotemporal Metabolic Shifts in Primary, Secondary, and Lipid Metabolism during Developmental Senescence in Arabidopsis1[W] (2013) (255)
- Metabolite profiling in plant biology: platforms and destinations (2004) (238)
- DOF transcription factor AtDof1.1 (OBP2) is part of a regulatory network controlling glucosinolate biosynthesis in Arabidopsis. (2006) (232)
- Technical advance: simultaneous analysis of metabolites in potato tuber by gas chromatography-mass spectrometry. (2000) (209)
- Exploring the Temperature-Stress Metabolome of Arabidopsis (2004) (208)
- Transcript and metabolite profiling of the adaptive response to mild decreases in oxygen concentration in the roots of arabidopsis plants (2008) (201)
- A Central Role of Abscisic Acid in Stress-Regulated Carbohydrate Metabolism (2008) (196)
- Recommendations for Reporting Metabolite Data[W] (2011) (195)
- Non-linear PCA: a missing data approach (2005) (192)
- Integrative functional genomics of salt acclimatization in the model legume Lotus japonicus. (2007) (184)
- Transgenic Arabidopsis plants can accumulate polyhydroxybutyrate to up to 4% of their fresh weight (2000) (183)
- Lotus japonicus Metabolic Profiling. Development of Gas Chromatography-Mass Spectrometry Resources for the Study of Plant-Microbe Interactions (2005) (182)
- Current challenges and developments in GC-MS based metabolite profiling technology. (2006) (179)
- Impact of soluble sugar concentrations on the acquisition of freezing tolerance in accessions of Arabidopsis thaliana with contrasting cold adaptation - evidence for a role of raffinose in cold acclimation (2004) (176)
- Molecular phenotyping of lignin-modified tobacco reveals associated changes in cell-wall metabolism, primary metabolism, stress metabolism and photorespiration. (2007) (171)
- Metabolome and water homeostasis analysis of Thellungiella salsuginea suggests that dehydration tolerance is a key response to osmotic stress in this halophyte. (2010) (171)
- Retention index thresholds for compound matching in GC-MS metabolite profiling. (2008) (170)
- CSB.DB: a comprehensive systems-biology database (2004) (168)
- Inferring Hypotheses on Functional Relationships of Genes: Analysis of the Arabidopsis thaliana Subtilase Gene Family (2005) (166)
- Metabolic profiling reveals local and systemic responses of host plants to nematode parasitism (2010) (159)
- Identification of primary and secondary metabolites with phosphorus status-dependent abundance in Arabidopsis, and of the transcription factor PHR1 as a major regulator of metabolic changes during phosphorus limitation. (2015) (159)
- Comprehensive chemical derivatization for gas chromatography-mass spectrometry-based multi-targeted profiling of the major phytohormones. (2003) (148)
- Metabolome analysis: the potential of in vivo labeling with stable isotopes for metabolite profiling. (2005) (146)
- Metabolic and transcriptomic signatures of rice floral organs reveal sugar starvation as a factor in reproductive failure under heat and drought stress. (2015) (143)
- Organization and Metabolism of Plastids and Mitochondria in Arbuscular Mycorrhizal Roots of Medicago truncatula1[w] (2005) (141)
- Global Changes in the Transcript and Metabolic Profiles during Symbiotic Nitrogen Fixation in Phosphorus-Stressed Common Bean Plants1[W][OA] (2009) (140)
- Nonsupervised construction and application of mass spectral and retention time index libraries from time-of-flight gas chromatography-mass spectrometry metabolite profiles. (2007) (137)
- Nutrimetabolomics: An Integrative Action for Metabolomic Analyses in Human Nutritional Studies. (2018) (135)
- Phospholipase C is required for the control of stomatal aperture by ABA. (2003) (134)
- Metabolic profiling of 'Conference' pears under low oxygen stress. (2009) (133)
- A new synthetic biology approach allows transfer of an entire metabolic pathway from a medicinal plant to a biomass crop (2016) (132)
- Comparative metabolomics of drought acclimation in model and forage legumes. (2012) (131)
- Predicting Arabidopsis Freezing Tolerance and Heterosis in Freezing Tolerance from Metabolite Composition (2009) (131)
- Transcriptome and metabolome reprogramming in Vitis vinifera cv. Trincadeira berries upon infection with Botrytis cinerea. (2015) (129)
- Gas chromatography mass spectrometry (2006) (128)
- Comparative ionomics and metabolomics in extremophile and glycophytic Lotus species under salt stress challenge the metabolic pre-adaptation hypothesis. (2011) (128)
- Molecular and enzymatic characterization of three phosphoinositide-specific phospholipase C isoforms from potato. (1998) (124)
- The Golm Metabolome Database: a database for GC-MS based metabolite profiling (2007) (123)
- COordination of Standards in MetabOlomicS (COSMOS): facilitating integrated metabolomics data access (2015) (121)
- Dissecting Rice Polyamine Metabolism under Controlled Long-Term Drought Stress (2013) (120)
- Profiling of diurnal patterns of metabolite and transcript abundance in potato (Solanum tuberosum) leaves (2005) (119)
- Inter-laboratory reproducibility of fast gas chromatography–electron impact–time of flight mass spectrometry (GC–EI–TOF/MS) based plant metabolomics (2009) (117)
- Identification of Drought Tolerance Markers in a Diverse Population of Rice Cultivars by Expression and Metabolite Profiling (2013) (114)
- Increasing Sucrose Uptake Capacity of Wheat Grains Stimulates Storage Protein Synthesis1[W] (2009) (114)
- Comparative Functional Genomics of Salt Stress in Related Model and Cultivated Plants Identifies and Overcomes Limitations to Translational Genomics (2011) (113)
- Discovering plant metabolic biomarkers for phenotype prediction using an untargeted approach. (2010) (110)
- Systems Analysis of the Response of Photosynthesis, Metabolism, and Growth to an Increase in Irradiance in the Photosynthetic Model Organism Chlamydomonas reinhardtii[C][W][OPEN] (2014) (105)
- Extensive metabolic cross-talk in melon fruit revealed by spatial and developmental combinatorial metabolomics. (2011) (103)
- GC-EI-TOF-MS analysis of in vivo carbon-partitioning into soluble metabolite pools of higher plants by monitoring isotope dilution after 13CO2 labelling. (2007) (102)
- Metabolic labeling of plant cell cultures with K15NO3 as a tool for quantitative analysis of proteins and metabolites (2006) (92)
- Potato guard cells respond to drying soil by a complex change in the expression of genes related to carbon metabolism and turgor regulation. (1997) (91)
- Comparative Metabolome Analysis of the Salt Response in Breeding Cultivars of Rice (2007) (89)
- Metabolic and Transcriptomic Phenotyping of Inorganic Carbon Acclimation in the Cyanobacterium Synechococcus elongatus PCC 79421[W] (2011) (89)
- Systems-Wide Analysis of Acclimation Responses to Long-Term Heat Stress and Recovery in the Photosynthetic Model Organism Chlamydomonas reinhardtii[W][OPEN] (2014) (88)
- Simultaneous interaction of Arabidopsis thaliana with Bradyrhizobium Sp. strain ORS278 and Pseudomonas syringae pv. tomato DC3000 leads to complex transcriptome changes. (2008) (87)
- Plant metabolomics and its potential for systems biology research background concepts, technology, and methodology. (2011) (86)
- Modulation of the Major Paths of Carbon in Photorespiratory Mutants of Synechocystis (2011) (84)
- Metabolome Phenotyping of Inorganic Carbon Limitation in Cells of the Wild Type and Photorespiratory Mutants of the Cyanobacterium Synechocystis sp. Strain PCC 68031[W] (2008) (84)
- TagFinder: preprocessing software for the fingerprinting and the profiling of gas chromatography-mass spectrometry based metabolome analyses. (2012) (83)
- Metabolic contribution to salt stress in two maize hybrids with contrasting resistance. (2015) (81)
- Metabolic Changes in Synechocystis PCC6803 upon Nitrogen-Starvation: Excess NADPH Sustains Polyhydroxybutyrate Accumulation (2013) (75)
- Macromolecular recognition directs calcium ions to coccolith mineralization sites (2016) (74)
- A plastid-localized glycogen synthase kinase 3 modulates stress tolerance and carbohydrate metabolism (2007) (73)
- Characterization of leaf apoplastic peroxidases and metabolites in Vigna unguiculata in response to toxic manganese supply and silicon (2009) (72)
- Metabolome and water status phenotyping of Arabidopsis under abiotic stress cues reveals new insight into ESK1 function. (2009) (69)
- An automated GCxGC‐TOF‐MS protocol for batch‐wise extraction and alignment of mass isotopomer matrixes from differential 13C‐labelling experiments: a case study for photoautotrophic‐mixotrophic grown Chlamydomonas reinhardtii cells (2009) (66)
- Recent Applications of Metabolomics Toward Cyanobacteria (2013) (66)
- Identification of brassinosteroid-related genes by means of transcript co-response analyses (2005) (64)
- A rapid approach for phenotype‐screening and database independent detection of cSNP/protein polymorphism using mass accuracy precursor alignment (2008) (63)
- Polyamine oxidase 5 loss-of-function mutations in Arabidopsis thaliana trigger metabolic and transcriptional reprogramming and promote salt stress tolerance. (2016) (62)
- Search for Transcriptional and Metabolic Markers of Grape Pre-Ripening and Ripening and Insights into Specific Aroma Development in Three Portuguese Cultivars (2013) (61)
- Photosynthesis and metabolism interact during acclimation of Arabidopsis thaliana to high irradiance and sulphur depletion. (2010) (61)
- Mining for robust transcriptional and metabolic responses to long-term salt stress: a case study on the model legume Lotus japonicus. (2010) (61)
- Autoinducers Act as Biological Timers in Vibrio harveyi (2012) (61)
- Regulation of arbuscular mycorrhization by apoplastic invertases: enhanced invertase activity in the leaf apoplast affects the symbiotic interaction. (2007) (60)
- Metabolic profiling of Arabidopsis thaliana epidermal cells (2010) (60)
- High night temperature strongly impacts TCA cycle, amino acid and polyamine biosynthetic pathways in rice in a sensitivity-dependent manner (2015) (58)
- Metabolite Profiling Reveals a Role for Atypical Cinnamyl Alcohol Dehydrogenase CAD1 in the Synthesis of Coniferyl Alcohol in Tobacco Xylem (2005) (56)
- Dynamic transcriptional and metabolic responses in yeast adapting to temperature stress. (2010) (56)
- Primed primary metabolism in systemic leaves: a functional systems analysis (2018) (55)
- Cyanobacterial Lactate Oxidases Serve as Essential Partners in N2 Fixation and Evolved into Photorespiratory Glycolate Oxidases in Plants[w] (2011) (55)
- Ca2+/phospholipid-binding (C2) domain in multiple plant proteins: novel components of the calcium-sensing apparatus (1998) (53)
- Metabolite and transcript markers for the prediction of potato drought tolerance (2017) (53)
- Molecular signatures associated with increased freezing tolerance due to low temperature memory in Arabidopsis. (2018) (53)
- Modification of OsSUT1 gene expression modulates the salt response of rice Oryza sativa cv. Taipei 309. (2012) (52)
- Systems analysis of ethanol production in the genetically engineered cyanobacterium Synechococcus sp. PCC 7002 (2017) (50)
- Rapid transcriptional and metabolic regulation of the deacclimation process in cold acclimated Arabidopsis thaliana (2017) (50)
- Low-carbon acclimation in carboxysome-less and photorespiratory mutants of the cyanobacterium Synechocystis sp. strain PCC 6803. (2012) (50)
- The drought response of potato reference cultivars with contrasting tolerance. (2016) (49)
- Isolation and characterization of three new PGPR and their effects on the growth of Arabidopsis and Datura plants (2017) (47)
- Metabolic responses of rice cultivars with different tolerance to combined drought and heat stress under field conditions (2019) (47)
- Identification of Arabidopsis Mutants Impaired in the Systemic Regulation of Root Nitrate Uptake by the Nitrogen Status of the Plant1[C][W] (2010) (46)
- Induced, Imprinted, and Primed Responses to Changing Environments: Does Metabolism Store and Process Information? (2019) (46)
- Insights into isoprene production using the cyanobacterium Synechocystis sp. PCC 6803 (2016) (46)
- Overexpression of Sinapine Esterase BnSCE3 in Oilseed Rape Seeds Triggers Global Changes in Seed Metabolism1[W][OA] (2011) (45)
- A genomics and multi-platform metabolomics approach to identify new traits of rice quality in traditional and improved varieties (2012) (44)
- Physiologic and metabolic responses of wheat seedlings to elevated and super-elevated carbon dioxide (2008) (44)
- Discovery of food identity markers by metabolomics and machine learning technology (2019) (43)
- Analysis of in vivo levels of acyl-thioesters with gas chromatography/mass spectrometry of the butylamide derivative. (1995) (43)
- Genetic and genomic analysis of legume flowers and seeds. (2006) (43)
- Highly Resolved Systems Biology to Dissect the Etioplast-to-Chloroplast Transition in Tobacco Leaves1[OPEN] (2019) (42)
- Integrated analysis of rice transcriptomic and metabolomic responses to elevated night temperatures identifies sensitivity- and tolerance-related profiles. (2017) (41)
- Light modulated activity of root alkaline/neutral invertase involves the interaction with 14-3-3 proteins. (2014) (41)
- Hypothesis-driven approach to predict transcriptional units from gene expression data (2004) (41)
- Plant metabolomics coming of age. (2007) (40)
- Mass spectral search and analysis using the Golm Metabolome Database (2012) (40)
- Integrated Transcriptomic and Metabolomic Characterization of the Low-Carbon Response Using an ndhR Mutant of Synechocystis sp. PCC 68031 (2015) (40)
- PaVESy: Pathway Visualization and Editing System (2004) (39)
- Erratum to: COordination of Standards in MetabOlomicS (COSMOS): facilitating integrated metabolomics data access (2015) (39)
- Arabidopsis thaliana Glyoxalase 2-1 Is Required during Abiotic Stress but Is Not Essential under Normal Plant Growth (2014) (38)
- Metabolite profiling reveals novel multi-level cold responses in the diploid model Fragaria vesca (woodland strawberry). (2012) (37)
- Profiling methods to identify cold-regulated primary metabolites using gas chromatography coupled to mass spectrometry. (2014) (37)
- Metabolic pathway relationships revealed by an integrative analysis of the transcriptional and metabolic temperature stress-response dynamics in yeast. (2010) (37)
- Methods, applications and concepts of metabolite profiling: primary metabolism. (2007) (36)
- Global Metabolic Profiling of Arabidopsis Polyamine Oxidase 4 (AtPAO4) Loss-of-Function Mutants Exhibiting Delayed Dark-Induced Senescence (2016) (35)
- Both cold and sub-zero acclimation induce cell wall modification and changes in the extracellular proteome in Arabidopsis thaliana (2019) (35)
- Time course effects on primary metabolism of potato (Solanum tuberosum) tuber tissue after mechanical impact (2010) (34)
- Erratum: Metabolite profiling for plant functional genomics (Nat. Biotechnol. (2000) 18: 1157-1161) (2001) (34)
- Multi-platform metabolomics analyses of a broad collection of fragrant and non-fragrant rice varieties reveals the high complexity of grain quality characteristics (2016) (33)
- Hybrid weakness controlled by the dosage-dependent lethal (DL) gene system in common bean (Phaseolus vulgaris) is caused by a shoot-derived inhibitory signal leading to salicylic acid-associated root death. (2007) (33)
- Annotating unknown components from GC/EI-MS-based metabolite profiling experiments using GC/APCI(+)-QTOFMS (2014) (33)
- Dissection of jasmonate functions in tomato stamen development by transcriptome and metabolome analyses (2015) (32)
- Systematic Review of Plant Ribosome Heterogeneity and Specialization (2020) (32)
- Effects of Inorganic Carbon Limitation on the Metabolome of the Synechocystis sp. PCC 6803 Mutant Defective in glnB Encoding the Central Regulator PII of Cyanobacterial C/N Acclimation (2014) (31)
- Plant Temperature Acclimation and Growth Rely on Cytosolic Ribosome Biogenesis Factor Homologs1[OPEN] (2018) (31)
- Central metabolite and sterol profiling divides tobacco male gametophyte development and pollen tube growth into eight metabolic phases (2017) (31)
- Composite Medicago truncatula plants harbouring Agrobacterium rhizogenes-transformed roots reveal normal mycorrhization by Glomus intraradices (2009) (30)
- Metabolic and transcriptional transitions in barley glumes reveal a role as transitory resource buffers during endosperm filling (2015) (29)
- Functional associations between the metabolome and manganese tolerance in Vigna unguiculata (2011) (29)
- Complementary DNAs Encoding Eukaryotic-Type Cytidine-5[prime]-Diphosphate-Diacylglycerol Synthases of Two Plant Species (1997) (29)
- Comparative Metabolomics and Molecular Phylogenetics of Melon (Cucumis melo, Cucurbitaceae) Biodiversity (2020) (27)
- Selective induction and subcellular distribution of ACONITASE 3 reveal the importance of cytosolic citrate metabolism during lipid mobilization in Arabidopsis. (2014) (26)
- Multi-omics reveals mechanisms of total resistance to extreme illumination of a desert alga (2020) (25)
- CyAbrB2 Contributes to the Transcriptional Regulation of Low CO2 Acclimation in Synechocystis sp. PCC 6803. (2016) (25)
- Transcriptomic and Metabolic Changes Associated with Photorespiratory Ammonium Accumulation in the Model Legume Lotus japonicus1[W] (2013) (25)
- Cell wall modification by the xyloglucan endotransglucosylase/hydrolase XTH19 influences freezing tolerance after cold and sub-zero acclimation. (2020) (24)
- Metabolic Flexibility Underpins Growth Capabilities of the Fastest Growing Alga (2017) (24)
- Metabolomics Identifies a Biomarker Revealing In Vivo Loss of Functional β-Cell Mass Before Diabetes Onset (2019) (23)
- The REIL1 and REIL2 Proteins of Arabidopsis thaliana Are Required for Leaf Growth in the Cold1[W][OPEN] (2013) (23)
- Metabolome-ionome-biomass interactions (2008) (23)
- Integrated Analysis of Engineered Carbon Limitation in a Quadruple CO2/HCO3− Uptake Mutant of Synechocystis sp. PCC 68031[OPEN] (2015) (22)
- Application of gas chromatography-mass spectrometry metabolite profiling techniques to the analysis of heathland plant diets of sheep. (2007) (22)
- Rationales and Approaches for Studying Metabolism in Eukaryotic Microalgae (2014) (21)
- Integrative “omic” analysis reveals distinctive cold responses in leaves and roots of strawberry, Fragaria × ananassa ‘Korona’ (2015) (21)
- Global mapping of protein–metabolite interactions in Saccharomyces cerevisiae reveals that Ser-Leu dipeptide regulates phosphoglycerate kinase activity (2021) (21)
- Impact of seasonal warming on overwintering and spring phenology of blackcurrant (2017) (20)
- Consequences of induced brassinosteroid deficiency in Arabidopsis leaves (2014) (20)
- Ion-dependent metabolic responses of Vicia faba L. to salt stress. (2018) (20)
- Symbiosis dependent accumulation of primary metabolites in arbuscule-containing cells (2015) (19)
- Quantification of stable isotope label in metabolites via mass spectrometry. (2014) (19)
- Corrigendum: Gas chromatography mass spectrometry–based metabolite profiling in plants (2015) (19)
- Characterization of the Wheat Leaf Metabolome during Grain Filling and under Varied N-Supply (2017) (19)
- Salt stress responses in a geographically diverse collection of Eutrema/Thellungiella spp. accessions. (2016) (19)
- Extrafloral nectar secretion from wounds of Solanum dulcamara (2016) (18)
- Volatiles of rhizobacteria Serratia and Stenotrophomonas alter growth and metabolite composition of Arabidopsis thaliana. (2018) (18)
- Can cyanobacteria serve as a model of plant photorespiration? - a comparative meta-analysis of metabolite profiles. (2016) (17)
- NLR Mutations Suppressing Immune Hybrid Incompatibility and Their Effects on Disease Resistance1[OPEN] (2018) (17)
- Assessment of drought tolerance and its potential yield penalty in potato. (2015) (17)
- Season Affects Yield and Metabolic Profiles of Rice (Oryza sativa) under High Night Temperature Stress in the Field (2020) (16)
- The iron‐stress activated RNA 1 (IsaR1) coordinates osmotic acclimation and iron starvation responses in the cyanobacterium Synechocystis sp. PCC 6803 (2018) (15)
- Metabolic responses of rice source and sink organs during recovery from combined drought and heat stress in the field (2019) (15)
- Integrated pathway modules using time-course metabolic profiles and EST data from Milnesium tardigradum (2012) (15)
- Acquisition of Volatile Compounds by Gas Chromatography-Mass Spectrometry (GC-MS). (2018) (14)
- Transcriptional, hormonal, and metabolic changes in susceptible grape berries under powdery mildew infection. (2021) (14)
- Arabidopsis REI-LIKE proteins activate ribosome biogenesis during cold acclimation (2020) (14)
- Riboswitch-mediated inducible expression of an astaxanthin biosynthetic operon in plastids. (2021) (14)
- Natural Variation in Freezing Tolerance and Cold Acclimation Response in Arabidopsis thaliana and Related Species. (2018) (14)
- Comprehensive Metabolomics Studies of Plant Developmental Senescence. (2018) (14)
- Systemic Potato virus X infection induces defence gene expression and accumulation of β-phenylethylamine-alkaloids in potato. (2006) (13)
- Carbon flux through photosynthesis and central carbon metabolism show distinct patterns between algae, C3 and C4 plants (2021) (13)
- Imbalanced Regulation of Fungal Nutrient Transports According to Phosphate Availability in a Symbiocosm Formed by Poplar, Sorghum, and Rhizophagus irregularis (2019) (12)
- Underground isoleucine biosynthesis pathways in E. coli (2020) (12)
- Metabolome analysis using GC-MS (2005) (12)
- Functional specialization of one copy of glutamine phosphoribosyl pyrophosphate amidotransferase in ureide production from symbiotically fixed nitrogen in Phaseolus vulgaris. (2016) (12)
- Membrane-Enriched Proteomics Link Ribosome Accumulation and Proteome Reprogramming With Cold Acclimation in Barley Root Meristems (2021) (11)
- Unravelling the Metabolic and Hormonal Machinery During Key Steps of Somatic Embryogenesis: A Case Study in Coffee (2019) (11)
- Physiological and molecular attributes contribute to high night temperature tolerance in cereals. (2021) (10)
- Conducting molecular biomarker discovery studies in plants. (2012) (10)
- Teaching (and learning from) metabolomics: the 2006 PlantMetaNet ETNA Metabolomics Research School. (2007) (10)
- Separation and Paired Proteome Profiling of Plant Chloroplast and Cytoplasmic Ribosomes (2020) (9)
- Rapid in situ 13C tracing of sucrose utilization in Arabidopsis sink and source leaves (2017) (9)
- The fungal endophyte Fusarium solani provokes differential effects on the fitness of two Lotus species. (2019) (9)
- Plant chromatin, metabolism and development - an intricate crosstalk. (2021) (9)
- Progress in Chemometrics and Biostatistics for Plant Applications, or: A Good Red Wine is a Bad White Wine (2011) (9)
- Increasing abscisic acid levels by immunomodulation in barley grains induces precocious maturation without changing grain composition (2016) (9)
- Multiplexed Profiling and Data Processing Methods to Identify Temperature-Regulated Primary Metabolites Using Gas Chromatography Coupled to Mass Spectrometry. (2020) (8)
- Assessing Dynamic Changes of Taste-Related Primary Metabolism During Ripening of Durian Pulp Using Metabolomic and Transcriptomic Analyses (2021) (8)
- The Impact of Metabolic Scion–Rootstock Interactions in Different Grapevine Tissues and Phloem Exudates (2021) (8)
- Establishment of a GC-MS-based 13 C-positional isotopomer approach suitable for investigating metabolic fluxes in plant primary metabolism. (2021) (8)
- Design of Metabolite Recovery by Variations of the Metabolite Profiling Protocol (2007) (8)
- Acyl carrier proteins from developing seeds of Cuphea lanceolata Ait (1993) (8)
- REIL proteins of Arabidopsis thaliana interact in yeast-2-hybrid assays with homologs of the yeast Rlp24, Rpl24A, Rlp24B, Arx1, and Jjj1 proteins (2014) (7)
- Oviposition by Spodoptera exigua on Solanum dulcamara Alters the Plant’s Response to Herbivory and Impairs Larval Performance (2018) (7)
- Acclimatisation of guard cell metabolism to long-term salinity. (2020) (6)
- Gene expression Non-linear PCA : a missing data approach (2005) (6)
- Editorial overview: Plant synthetic and systems biology. (2017) (6)
- Characterization of the Heat-Stable Proteome during Seed Germination in Arabidopsis with Special Focus on LEA Proteins (2021) (6)
- Can Metabolite- and Transcript-Based Selection for Drought Tolerance in Solanum tuberosum Replace Selection on Yield in Arid Environments? (2020) (6)
- Metabolomic and Proteomic Analysis of Manganese Sensitivity and Tolerance in the Tropical Legume Cowpea (Vigna unguiculata L.) (2009) (5)
- Metabolite Profiling Reveals Sensitivity-Dependent Metabolic Shifts in Rice (Oryza Sativa L.) Cultivars under High Night Temperature Stress (2015) (5)
- Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory. (2022) (5)
- The Synechocystis sp. PCC 6803 Genome Encodes Up to Four 2-Phosphoglycolate Phosphatases (2018) (5)
- Metabolic, Transcriptional and Proteomic Profiling of Cold Response in Fragaria vesca (2009) (5)
- Untargeted metabolomics as a hypothesis-generation tool in plant protection product discovery: Highlighting the potential of trehalose and glycerol metabolism of fungal conidiospores as novel targets (2020) (4)
- Cysteine and Methionine Biosynthetic Enzymes Have Distinct Effects on Seed Nutritional Quality and on Molecular Phenotypes Associated With Accumulation of a Methionine-Rich Seed Storage Protein in Rice (2020) (4)
- Focus Issue Editorial: Synthetic Biology (2019) (4)
- The metabolic response of suspension-cultured cells from blast-resistant and -susceptible rice (Oryza sativa L.) genotypes to a Pyricularia oryzae elicitor (2019) (4)
- Spatially Enriched Paralog Rearrangements Argue Functionally Diverse Ribosomes Arise during Cold Acclimation in Arabidopsis (2021) (4)
- Effect of Senescence Phenotypes and Nitrate Availability on Wheat Leaf Metabolome during Grain Filling (2019) (4)
- From systems biology to systems chemistry: metabolomic procedures enable insight into complex chemical reaction networks in water (2014) (4)
- Integration of relative metabolomics and transcriptomics time-course data in a metabolic model pinpoints effects of ribosome biogenesis defects on Arabidopsis thaliana metabolism (2021) (3)
- Editorial: Metabolome Informatics and Statistics: Current State and Emerging Trends (2016) (3)
- CSB . DB : the Golm Metabolome Database (2005) (3)
- Mass appeal: metabolite identification in mass spectrometry-focused untargeted metabolomics (2012) (3)
- Regulation of Arbuscular Mycorrhiza by Apoplastic Invertases : Increased Invertase Activity in the Leaves Affects the Symbiotic Interaction (2007) (3)
- Metabolic Profiling and Metabolite Correlation Network Analysis Reveal That Fusarium solani Induces Differential Metabolic Responses in Lotus japonicus and Lotus tenuis against Severe Phosphate Starvation (2021) (3)
- Genome-Wide Approach to Identify Quantitative Trait Loci for Drought Tolerance in Tetraploid Potato (Solanum tuberosum L.) (2021) (3)
- Lotus metabolome analysis using GC-MS (2005) (2)
- Could ethanolic fermentation during cold shock be a novel plant cold stress coping strategy (2009) (2)
- Author response: A new synthetic biology approach allows transfer of an entire metabolic pathway from a medicinal plant to a biomass crop (2016) (2)
- New advances on ectomycorrhizal establishment : learning from transcriptome and metabolome analysis (2011) (1)
- Metabolome analysis of the interaction between perennial ryegrass (Lolium perenne) and the fungal endophyte [Abstract]. (2005) (1)
- Metabolic profiling of Conference pears under oxygen stress (2008) (1)
- Ion Homeostasis and Metabolome Analysis of Arabidopsis 14-3-3 Quadruple Mutants to Salt Stress (2021) (1)
- Co‐expression networks of deacclimation‐impaired transcription factor mutants identified complex regulation of the cold stress release response (2022) (1)
- Both cold and sub-zero acclimation induce cell wall modification and changes in the extracellular proteome in Arabidopsis thaliana (2019) (1)
- Molecular signatures of increased freezing tolerance due to low temperature memory in Arabidopsis (2018) (1)
- Purification and Characterization of 2 Acyl Carrier Proteins from Cuphea-Lanceolata Seeds (1991) (1)
- Homologs of Circadian Clock Proteins Impact the Metabolic Switch Between Light and Dark Growth in the Cyanobacterium Synechocystis sp. PCC 6803 (2021) (1)
- COordination of Standards in MetabOlomicS (COSMOS): facilitating integrated metabolomics data access (2015) (1)
- Unravelling Differences in Candidate Genes for Drought Tolerance in Potato (Solanum tuberosum L.) by Use of New Functional Microsatellite Markers (2021) (1)
- The fungal endophyte Fusarium solani provokes differential effects on the energy balance of two Lotus species (2019) (1)
- Application of GCMS-TOF metabolite profiling techniques to the analysis of heathland plant diets of sheep (2006) (1)
- Consequences of induced brassinosteroid deficiency in Arabidopsis leaves (2014) (0)
- \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$${\text{COSNet}}_i$$\end{document}COSNeti: ComplexOme-Structural Networ (2021) (0)
- COSNeti: ComplexOme-Structural Network Interpreter used to study spatial enrichment in metazoan ribosomes (2021) (0)
- The Sporisorium reilianum Effector Vag2 Promotes Head Smut Disease via Suppression of Plant Defense Responses (2022) (0)
- Insights into nodule physiology and metabolism from transcriptomics, metabolomics, bioinformatics, and genetics (2006) (0)
- UvA-DARE (Digital Polyamine metabolism and activation of lipid signalling pathways in Arabidopsis thaliana (2017) (0)
- Multi-platform metabolomics analyses of a broad collection of fragrant and non-fragrant rice varieties reveals the high complexity of grain quality characteristics (2016) (0)
- Cellular inventory: A joint initiative of the comprehensive systems-biology database [CSB. DB], the Golm Metabolite Database [GMD] and MapMan (2005) (0)
- $${\text{COSNet}}_i$$ COSNet i : ComplexOme-Structural Network Interpreter used to study spatial enrichment in metazoan ribosomes (2021) (0)
- Differentiation of the High Night Temperature Response in Leaf Segments of Rice Cultivars with Contrasting Tolerance (2021) (0)
- Chapter 5 Ion homeostasis and metabolome analysis of salt stressed Arabidopsis 14-3-3 quadruple mutants (2016) (0)
- A genomics and multi-platform metabolomics approach to identify new traits of rice quality in traditional and improved varieties (2011) (0)
- Spring phenology, cropping performance and expression of genes involved in flower development in blackcurrant are affected by a slight increase in winter season temperatures (2016) (0)
- Chapter 3 Light modulated activity of root alkaline / neutral invertase involves the interaction with 14-3-3 proteins (2016) (0)
- Rate of 13 C accumulation during a 0.5–10.0 min 13 C i -VHC pulse using 2% (w/w) 13 C-NaHCO 3 and 13 C enrichment at maximum labelling (20–60 min) in the pools of 3-phosphoglycerate (3PGA) and phosphoenolpyruvate (PEP). (2011) (0)
- ff ect of Senescence Phenotypes and Nitrate Availability on Wheat Leaf Metabolome during Grain Filling (2019) (0)
- Discovery of food identity markers by metabolomics and machine learning technology (2019) (0)
- Identification of molecular determinants of low temperature memory and triggering in Arabidopsis (2018) (0)
- Running head : Carbon regulation in Synechocystis (2015) (0)
- Symbiosis dependent accumulation of primary metabolites in arbuscule-containing cells (2015) (0)
- Molecular signatures for low temperature memory in Arabidopsis (2019) (0)
- MOESM7 of Insights into isoprene production using the cyanobacterium Synechocystis sp. PCC 6803 (2016) (0)
- Metabolic profiling of heathland plants in the diet of sheep (2005) (0)
- Cold acclimation, deacclimation and memory in Arabidopsis (2018) (0)
- Rapid transcriptional and metabolic regulation of the deacclimation process in cold acclimated Arabidopsis thaliana (2017) (0)
- Global mapping of protein–metabolite interactions in Saccharomyces cerevisiae reveals that Ser-Leu dipeptide regulates phosphoglycerate kinase activity (2021) (0)
- Aalborg Universitet Rapid transcriptional and metabolic regulation of the deacclimation process in cold acclimated Arabidopsis (2017) (0)
- Author response: Underground isoleucine biosynthesis pathways in E. coli (2020) (0)
- A method for finding the function of a gene (2004) (0)
- Relationship between grazing lamb growth rate and blood plasma analytes as profiled by gas chromatography with time-of-flight mass spectrometry (GC-TOF/MS). (2010) (0)
- Technological and Physiological Aspects of GC-MS Based Metabolite Profiling for Plant Stress Responses (2012) (0)
- Carbon flux through photosynthesis and central carbon metabolism show distinct patterns between algae, C3 and C4 plants (2021) (0)
- Rapid in situ 13C tracing of sucrose utilization in Arabidopsis sink and source leaves (2017) (0)
- Sugar Starvation of Rice Anthers is a Factor in Reproductive Failure under Heat and Drought Stress, as shown by Metabolite and Transcript Profiling (2015) (0)
- Running head : Intracellular Carbon Limitation in Synechocystis 1 2 (2015) (0)
- Specific Proteome in Proliferating 2 Plant Tissue during Cold (0)
- Low temperature priming, memory and triggering in Arabidopsis (2017) (0)
- Analysis of Fatty-Acid Biosynthesis in Transgenic Plants with Modified Oil Composition (1994) (0)
- Phosphoinositide signal transduction in guard cells. (1998) (0)
- Drought tolerance in potato (Solanum tuberosum L.): Marker development for potential candidate genes (2016) (0)
- Convergence and molecular evolution of floral fragrance after independent transitions to self–fertilization (2022) (0)
- Distinct metabolic flux modes through the tricarboxylic acid cycle in mesophyll and guard cells revealed by GC-MS-based 13C-positional isotopomer analysis (2021) (0)
- I . 1 Gas Chromatography Mass Spectrometry (2019) (0)
- Processes for extraction and analysis of content materials of organic material (2002) (0)
- Authenticity assessment of commercial bakery products with chia, flax and sesame seeds: Application of targeted and untargeted metabolomics results from seeds and lab-scale cookies. (2022) (0)
- Research erratum (2001) (0)
- PEPc-mediated CO2 assimilation provides carbons to gluconeogenesis and the TCA cycle in both dark-exposed and illuminated guard cells (2021) (0)
- The metabolic response of suspension-cultured cells from blast-resistant and -susceptible rice (Oryza sativa L.) genotypes to a Pyricularia oryzae elicitor (2019) (0)
- Erratum to: COordination of Standards in MetabOlomicS (COSMOS): facilitating integrated metabolomics data access (2015) (0)
- Dissection of jasmonate functions in tomato stamen development by transcriptome and metabolome analyses (2015) (0)
- Process for the extraction of ingredients of organic material. (2002) (0)
- Title : The iron-stress activated RNA 1 ( IsaR 1 ) coordinates osmotic acclimation and iron starvation responses in the cyanobacterium Synechocystis sp . PCC 6803 (2018) (0)
- Metabolomics: Comprehensive analysis of metabolism (2006) (0)
- Chapter 6 14-3-3 Positively regulates alkaline / neutral invertases (2014) (0)
- Virulence-related metabolism is activated in Botrytis cinerea mostly in the interaction with tolerant green grapes that remain largely unaffected in contrast with susceptible green grapes (2022) (0)
- Discovery of Transcript and Metabolite Markers for the Breeding of Drought Tolerant Potato cultivars using High Throughput Technologies (2015) (0)
- Univariate statistical analysis of gas chromatography – mass spectrometry fingerprints analyses (2021) (0)
- XEML Interactive designer (2014) (0)
- DESIGN OF METABOLITE RECOVERY PROFILING PROTOCOL (2007) (0)
- Breeding of Persian melon: Purpose to increase volatile compounds in melon ( Cucumis melo ) intergroup F1 cross population (2023) (0)
- Annotating unknown components from GC/EI-MS-based metabolite profiling experiments using GC/APCI(+)-QTOFMS (2013) (0)
- Primed primary metabolism in systemic leaves: a functional systems analysis (2018) (0)
- Transcript, lipid and metabolite changes contribute to low temperature memory in Arabidopsis (2018) (0)
This paper list is powered by the following services:
What Schools Are Affiliated With Joachim Kopka?
Joachim Kopka is affiliated with the following schools:
