Joanna Sułkowska

Q: What Schools Are Affiliated With Joanna Sułkowska

Joanna Sułkowska is affiliated with the following schools: California Institute of Technology, University of Warsaw

Joanna Sułkowska's AcademicInfluence.com Rankings

Joanna Sułkowska

Chemistry

#5259

World Rank

#6408

Historical Rank

Quantum Chemistry

#77

World Rank

#77

Historical Rank

Physical Chemistry

#940

World Rank

#1010

Historical Rank

chemistry Degrees

Joanna Sułkowska

Physics

#6469

World Rank

#8416

Historical Rank

physics Degrees

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Chemistry
Physics

Joanna Sułkowska's Degrees

PhD Chemistry University of Warsaw
Masters Physics University of Warsaw

Why Is Joanna Sułkowska Influential?

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According to Wikipedia, Joanna Ida Sułkowska is a Polish physicist and chemist who specializes in biophysics and protein molecular biophysics and theory. She is an assistant professor in the Faculty of Chemistry and the Center of New Technologies at the University of Warsaw.

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Joanna Sułkowska's Published Works

Number of citations in a given year to any of this author's works

Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author

Published Works

Genomics-aided structure prediction (2012) (210)
Conservation of complex knotting and slipknotting patterns in proteins (2012) (210)
KnotProt: a database of proteins with knots and slipknots (2014) (157)
Dodging the crisis of folding proteins with knots (2009) (156)
A Stevedore's Protein Knot (2010) (150)
Mechanical stretching of proteins—a theoretical survey of the Protein Data Bank (2007) (131)
Selection of optimal variants of Gō-like models of proteins through studies of stretching. (2008) (114)
On the remarkable mechanostability of scaffoldins and the mechanical clamp motif (2009) (113)
Stabilizing effect of knots on proteins (2008) (111)
Mechanical Strength of 17 134 Model Proteins and Cysteine Slipknots (2009) (107)
Slipknotting upon native-like loop formation in a trefoil knot protein (2010) (101)
Topological knots and links in proteins (2017) (93)
Energy landscape of knotted protein folding (2012) (88)
Tightening of knots in proteins. (2007) (79)
Identifying knots in proteins. (2013) (65)
Complex lasso: new entangled motifs in proteins (2016) (64)
Methyl transfer by substrate signaling from a knotted protein fold (2016) (64)
Knotting a Protein in Explicit Solvent (2013) (59)
KnotProt 2.0: a database of proteins with knots and other entangled structures (2018) (53)
Hysteresis as a Marker for Complex, Overlapping Landscapes in Proteins. (2013) (51)
In Search of Functional Advantages of Knots in Proteins (2016) (49)
LassoProt: server to analyze biopolymers with lassos (2016) (46)
The Unique Cysteine Knot Regulates the Pleotropic Hormone Leptin (2012) (44)
Stretching to understand proteins - a survey of the protein data bank. (2008) (43)
Untying knots in proteins. (2010) (42)
Knotting pathways in proteins. (2013) (42)
Jamming proteins with slipknots and their free energy landscape. (2009) (41)
To Tie or Not to Tie? That Is the Question (2017) (40)
Pierced Lasso Bundles Are a New Class of Knot-like Motifs (2014) (39)
Connecting thermal and mechanical protein (un)folding landscapes. (2014) (36)
BSDB: the biomolecule stretching database (2010) (35)
LinkProt: a database collecting information about biological links (2016) (34)
On folding of entangled proteins: knots, lassos, links and θ-curves. (2020) (31)
Topoly: Python package to analyze topology of polymers (2020) (30)
Thermal unfolding of proteins. (2005) (28)
Proteins' Knotty Problems. (2019) (26)
Predicting the order in which contacts are broken during single molecule protein stretching experiments (2008) (25)
Protein Knotting by Active Threading of Nascent Polypeptide Chain Exiting from the Ribosome Exit Channel. (2018) (25)
PyLasso: a PyMOL plugin to identify lassos (2017) (22)
PDBe-KB: collaboratively defining the biological context of structural data (2021) (22)
The exclusive effects of chaperonin on the behavior of proteins with 52 knot (2018) (22)
Prediction of the optimal set of contacts to fold the smallest knotted protein (2015) (21)
Knot localization in proteins. (2013) (20)
TrmD: A Methyl Transferase for tRNA Methylation With m1G37. (2017) (19)
Knotting and unknotting proteins in the chaperonin cage: Effects of the excluded volume (2017) (19)
PconsFam: An Interactive Database of Structure Predictions of Pfam Families. (2019) (17)
SARS-CoV-2 Papain-Like Protease Potential Inhibitors—In Silico Quantitative Assessment (2021) (15)
KnotGenome: a server to analyze entanglements of chromosomes (2018) (11)
PyLink: a PyMOL plugin to identify links (2019) (11)
GapRepairer: a server to model a structural gap and validate it using topological analysis (2018) (9)
Knot_pull—python package for biopolymer smoothing and knot detection (2019) (9)
θ-curves in proteins (2019) (8)
Restriction of S-adenosylmethionine conformational freedom by knotted protein binding sites (2019) (8)
DCA-MOL: A PyMOL Plugin To Analyze Direct Evolutionary Couplings (2019) (7)
Entangled Proteins: Knots, Slipknots, Links, and Lassos (2018) (7)
Genus for biomolecules (2019) (6)
Genus trace reveals the topological complexity and domain structure of biomolecules (2018) (6)
Supercoiling in a Protein Increases its Stability. (2019) (6)
GLN: a method to reveal unique properties of lasso type topology in proteins (2020) (6)
Mg2+-Dependent Methyl Transfer by a Knotted Protein: A Molecular Dynamics Simulation and Quantum Mechanics Study (2020) (6)
Statistical Properties of Lasso-Shape Polymers and Their Implications for Complex Lasso Proteins Function (2019) (6)
Structure-Based Models of Biomolecules: Stretching of Proteins, Dynamics of Knots, Hydrodynamic Effects, and Indentation of Virus Capsids (2011) (5)
The Folding of Knotted Proteins: Distinguishing the Distinct Behavior of Shallow and Deep Knots (2020) (5)
Tests of the Structure-Based Models of Proteins (2009) (5)
Defining and detecting links in chromosomes (2019) (4)
New 63 knot and other knots in human proteome from AlphaFold predictions (2022) (2)
AlphaKnot: server to analyze entanglement in structures predicted by AlphaFold methods (2022) (2)
The APS-bracket – A topological tool to classify lasso proteins, RNAs and other tadpole-like structures (2018) (2)
Identification of CB1 Ligands among Drugs, Phytochemicals and Natural-Like Compounds: Virtual Screening and In Vitro Verification (2022) (2)
$\theta$-curves in proteins (2019) (2)
Lasso Proteins—Unifying Cysteine Knots and Miniproteins (2021) (2)
Jamming Proteins with Slipknots and Their Free Energy Landscape (2010) (2)
Slipknotted and unknotted monovalent cation-proton antiporters evolved from a common ancestor (2021) (1)
First crystal structure of double knotted protein TrmD-Tm1570 – inside from degradation perspective (2023) (1)
The Exclusive Effects of Chaperonin on the Free Energy Landscape of Proteins with Complex Knots (2018) (1)
DETERMINING CRITICAL AMINO ACID CONTACTS FOR KNOTTED PROTEIN FOLDING (2014) (1)
Amino acid variants of SARS-CoV-2 papain-like protease have impact on drug binding (2022) (1)
A Stevedore's Protein Knot The Harvard community has made this article openly available. Please share how this access benefits you. Your story matters (2010) (0)
Abstract Submitted for the MAR09 Meeting of The American Physical Society (2008) (0)
Chapter 8 Entangled Proteins : Knots , Slipknots , Links , and Lassos (2018) (0)
Current approaches to disentagle the mystery of knotted protein folding (2016) (0)
Stretching of the knotted protein YibK and its unknotted constructs(Knots and soft-matter physics: Topology of polymers and related topics in physics, mathematics and biology) (2009) (0)
AlphaFold predicts novel human proteins with knots (2023) (0)
The Force-Induced Activation of Talin in a Structure-Based Model Simulation (2012) (0)
Protein Knot Forming, Terminal-Through-Loop Threading Events can Occur on the Microsecond (<10) Timescale (2012) (0)
Identification of Novel CB2 Ligands through Virtual Screening and In Vitro Evaluation (2023) (0)
Nucleolar Essential Protein 1 (Nep1): Elucidation of Enzymatic Catalysis Mechanism by Combined Molecular Dynamics Simulation and Quantum Chemical Calculations (2023) (0)
Characterization of substrate binding and function of a knotted protein (2018) (0)
Genus trace reveals the topological complexity and domain structure of biomolecules (2018) (0)
Molecular Dynamics and structural comparison approach to understanding the role of knots in proteins (2016) (0)
Structure Based Protein Models and In Vitro Experiments to Investigate the Folding Landscape of the Human Obesity Protein Leptin (2012) (0)

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Other Resources About Joanna Sułkowska

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What Schools Are Affiliated With Joanna Sułkowska?

Joanna Sułkowska is affiliated with the following schools:

Joanna Sułkowska's Academic­Influence.com Rankings

Joanna Sułkowska's Degrees

Why Is Joanna Sułkowska Influential?

Joanna Sułkowska's Published Works

Published Works

Other Resources About Joanna Sułkowska

What Schools Are Affiliated With Joanna Sułkowska?

Joanna Sułkowska's AcademicInfluence.com Rankings