John McCaskill
Australian chemist
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Chemistry
John McCaskill's Degrees
- PhD Chemistry University of Melbourne
Why Is John McCaskill Influential?
(Suggest an Edit or Addition)According to Wikipedia, John S. McCaskill is an Australian chemist who works in a wide variety of fields ranging from theoretical biochemistry to novel computation to artificial life. Biography After graduating from Sydney University in 1978 and obtaining his PhD in 1982 as a Rhodes Scholar at New College, Oxford, McCaskill joined the group of Nobel prize-winner Manfred Eigen at the Max Planck Institute for Biophysical Chemistry in Göttingen, Germany. He became Professor for Theoretical Biochemistry at the Friedrich Schiller University Jena in 1992, founding a multidisciplinary research group in Biomolecular Information Processing at the Institute for Molecular Biotechnology , a field which he pioneered for 25 years while holding positions at the GMD , the Fraunhofer Society, Ruhr University Bochum, the Santa Fe Institute, and the European Centre for Living Technology at the Ca' Foscari University of Venice.
John McCaskill's Published Works
Published Works
- The equilibrium partition function and base pair binding probabilities for RNA secondary structure (1990) (1327)
- Molecular quasi-species. (1988) (726)
- Open Problems in Artificial Life (2000) (325)
- The molecular quasi-species (2007) (178)
- Replication of viruses in a growing plaque: a reaction-diffusion model. (1992) (108)
- Living Technology: Exploiting Life's Principles in Technology (2010) (97)
- Fokker-Planck interpretation of picosecond intramolecular dynamics in solutions (1979) (73)
- A molecular predator and its prey: coupled isothermal amplification of nucleic acids. (1997) (63)
- Artificial Life VII: Proceedings of the Seventh International Conference on Artificial Life (2000) (63)
- Optically programming DNA computing in microflow reactors. (2001) (59)
- Traveling waves of in vitro evolving RNA. (1989) (54)
- Evolving Reaction-Diffusion Ecosystems with Self-Assembling Structures in Thin Films (1998) (51)
- Error threshold for spatially resolved evolution in the quasispecies model. (2001) (50)
- Cooperative amplification of templates by cross-hybridization (CATCH). (1997) (47)
- Neutral search spaces for artificial evolution: a lesson from life (2000) (44)
- Spatially resolved in vitro molecular ecology. (1997) (40)
- Evolutionary self-organization of cell-free genetic coding (2001) (40)
- DNA computing in microreactors (2001) (40)
- RNA multi-structure landscapes (1993) (39)
- Images of evolution: origin of spontaneous RNA replication waves. (1993) (39)
- A stochastic theory of macromolecular evolution (1984) (34)
- Template-directed and template-free RNA synthesis by Q beta replicase. (1993) (31)
- Chemical evolution among artificial proto-cells (2000) (31)
- In vitro DNA-based predator-prey system with oscillatory kinetics (1998) (30)
- On demand nanoliter-scale microfluidic droplet generation, injection, and mixing using a passive microfluidic device. (2015) (28)
- In vitro evolution of molecular cooperation in CATCH, a cooperatively coupled amplification system. (1998) (27)
- The Stochastic Evolution of Catalysts in Spatially Resolved Molecular Systems (2001) (27)
- Connectivity and Catastrophe — Towards a General Theory of Evolution (2000) (24)
- Introduction to Recent Developments in Living Technology (2013) (22)
- From Directed to Open-Ended Evolution in a Complex Simulation Model (2000) (21)
- End-specific covalent photo-dependent immobilisation of synthetic DNA to paramagnetic beads. (2000) (20)
- Evolutionary self-organization in complex fluids (2007) (20)
- Parallel random number generator for inexpensive configurable hardware cells (2001) (20)
- Biological and Chemical Information Technologies (2011) (20)
- Evolving Solutions of the Density Classification Task in 1D Cellular Automata, Guided by Parameters that Estimate their Dynamic Behaviour (2000) (20)
- Art and Artificial Life—A Coevolutionary Approach (2000) (20)
- Microfabrication of a BioModule composed of microfluidics and digitally controlled microelectrodes for processing biomolecules (2003) (19)
- Addressing, amplifying and switching DNAzyme functions by electrochemically-triggered release of metal ions (2015) (19)
- DNA with 3'-5'-disulfide links--rapid chemical ligation through isosteric replacement. (2014) (19)
- Painlevé solution of the poisson-boltzmann equation for a cylindrical polyelectrolyte in excess salt solution (1988) (19)
- Optimization and design of oligonucleotide setup for strand displacement amplification. (2005) (18)
- Evolutionary Neural Topiary: Growing and Sculpting Artificial Neurons to Order (2000) (18)
- A Less Abstract Artificial Chemistry (2000) (18)
- Monitoring the amplification of CATCH, a 3SR based cooperatively coupled isothermal amplification system, by fluorimetric methods. (1997) (18)
- An Electronically Controlled Microfluidic Approach towards Artificial Cells (2006) (17)
- Connecting Brains to Robots: The Development of a Hybrid System for the Study of Learning in Neural Tissues (2000) (17)
- Evolutionary Design of a DDPD Model of Ligation (2005) (17)
- Graph Replacement Chemistry for DNA Processing (2000) (17)
- From Reconfigurability to Evolution in Construction Systems: Spanning the Electronic, Microfluidic and Biomolecular Domains (2000) (17)
- The cultural evolution of syntactic constraints in phonology. (2000) (16)
- Hardware Evolution with a Massively Parallel Dynamically Reconfigurable Computer: POLYP (1998) (15)
- A parallel hardware evolvable computer POLYP (1997) (15)
- Microscale Chemically Reactive Electronic Agents (2012) (15)
- Electronically programmable membranes for improved biomolecule handling in micro-compartments on-chip (2008) (14)
- Using flocks to drive a Geographical Analysis Engine (2000) (14)
- Hybrid poly(dimethylsiloxane)-silicon microreactors used for molecular computing (2002) (14)
- Ultra low-power, -area and -frequency CMOS thyristor based oscillator for autonomous microsystems (2016) (14)
- Development and Differentiation (2000) (14)
- Field programmable chemistry: Integrated chemical and electronic processing of informational molecules towards electronic chemical cells (2012) (14)
- NGEN: A Massively Parallel Reconfigurable Computer for Biological Simulation: Towards a Self-Organizing Computer (1996) (14)
- Emergence of Coding and its Specificity as a Physico-Informatic Problem (2015) (13)
- NGEN-Configurable computer hardware to similate long-time self organization of biopolymers (1994) (13)
- A roadmap to protocells (2008) (13)
- Review article:electronic transport in short mean-free path liquid metals (1982) (13)
- Artificial Life VII (2000) (13)
- Cellular Automata Model Of Emergent Collective Bi-Directional Pedestrian Dynamics (2000) (13)
- Spatially resolved simulations of membrane reactions and dynamics: Multipolar reaction DPD (2009) (12)
- Developmental Insights into Evolving Systems: Roles of Diversity, Non-Selection, Self-Organization, Symbiosis (2000) (12)
- Searching for Rhythms in Asynchronous Random Boolean Networks (2000) (12)
- DNA-library assembly programmed by on-demand nano-liter droplets from a custom microfluidic chip. (2015) (12)
- Evolving Inductive Generalization via Genetic Self-Assembly (2006) (12)
- Electronic pH switching of DNA triplex reactions (2015) (12)
- Emergent Design: Artificial Life for Architecture Design (2000) (11)
- Folding Stabilizes the Evolution of Catalysts (2004) (11)
- Evolutionary stabilization of generous replicases by complex formation (2004) (11)
- Molecular systems on-chip (MSoC) steps forward for programmable biosystems (2004) (11)
- Evolution im Laboratorium (1989) (10)
- Cascadable Hybridisation Transfer of Specific DNA between Microreactor Selection Modules (2001) (10)
- Complex patterns predicted in an in vitro experimental model system for the evolution of molecular cooperation. (1999) (9)
- A Microfow Reactor for Two Dimensional Investigations of In Vitro Amplification Systems (1998) (9)
- Influence of chance, history and adaptation on evolution in Digitalia (2000) (9)
- Finite concentration fluorescence quenching in the presence of diffusion (1983) (9)
- On the theory of the Stern-Volmer coefficient for dense fluids (1981) (8)
- Reducing Collective Behavioural Complexity through Heterogeneity (2000) (8)
- General-Purpose, Parallel and Reversible Microfluidic Interconnects (2015) (8)
- Spatially resolved evolution studies in an open reactor (1994) (8)
- Simulation Models as Opaque Thought Experiments (2000) (8)
- Exploring Gaia Theory: Artificial Life on a Planetary Scale (2000) (8)
- Interactions between Learning and Evolution: The Outstanding Strategy Generated by the Baldwin Effect (2000) (8)
- Evolving Physical Creatures (2000) (8)
- John von Neumann and the Evolutionary Growth of Complexity: Looking Backwards, Looking Forwards... (2000) (7)
- Evolvability Analysis: Distribution of Hyperbiobs in a Variable-Length Protein Genotype Space (2000) (7)
- Analysing Emergent Dynamics of Evolving Computation in 2D Cellular Automata (2019) (7)
- Real artificial life: Where we may be (2000) (6)
- The role of bound states in electronic transport (1984) (6)
- Artificial Evolution: creativity and the possible (2000) (6)
- Evolution of Differentiation in Multithreaded Digital Organisms (2000) (6)
- Advanced Simulation in the Configurable Massively Parallel Hardware MereGen (2002) (6)
- Flows in micro fluidic networks: From theory to experiment (2004) (6)
- A CMOS 16k microelectrode array as docking platform for autonomous microsystems (2016) (5)
- Steady Flow Micro-Reactor Module for Pipelined DNA Computations (2000) (5)
- Open flow microreactors (1996) (5)
- Studying Attention Dynamics of a Predator in a Prey-Predator System (2000) (5)
- Sympatric Speciation from Interaction-induced Phenotype Differentiation (2000) (5)
- Sequence‐specific nucleic acid mobility using a reversible block copolymer gel matrix and DNA amphiphiles (lipid‐DNA) in capillary and microfluidic electrophoretic separations (2015) (5)
- Evolutionary Microfluidic Complementation Toward Artificial Cells (2008) (5)
- Self-Organisation in Micro-Configurable Hardware (2000) (5)
- Complex patterns in a trans-cooperatively coupled DNA amplification system (2000) (5)
- A 200~µm by 100~µm Smart Submersible System With an Average Current Consumption of 1.3nA and a Compatible Voltage Converter. (2017) (4)
- Evolution of genetic code through isologous diversification of cellular states (2000) (4)
- Open Problems in Artificial Life Mark A. Bedau (2001) (4)
- Modeling Emergence of Complexity: the Application of Complex System and Origin of Life Theory to Interactive Art on the Internet (2000) (4)
- Self-Replicating Worms That Increase Structural Complexity through Gene Transmission (2000) (3)
- A 200 μm by 100 μm Smart Dust system with an average current consumption of 1.3 nA (2016) (3)
- Biochemical Amplification Waves in a One-Dimensional Microflow System (2002) (3)
- Synthetic Harmonies: an approach to musical semiosis by means of cellular automata (2000) (3)
- A search for multiple autocatalytic sets in artificial chemistries based on boolean networks (2000) (3)
- Surface friction constant and range of dynamical interaction between adatoms on metal surfaces (1983) (3)
- Optomagnetic detection of DNA triplex nanoswitches. (2017) (3)
- A massively parallel computer with user configurable hardware (1994) (2)
- Flows in micro fluidic networks: from theory to simulation (2003) (2)
- Evolution of Cooperation in Social Dilemma — Dynamical Systems Game Approach (2000) (2)
- Reaction Mechanisms in the OO Chemistry (2000) (2)
- Engineering, Emergent Engineering, and Artificial Life: Unsurprise, Unsurprising Surprise, and Surprising Surprise (2000) (2)
- On the Emergence of Possession Norms in Agent Societies (2000) (2)
- Artificial Life as a bridge between Science and Philosophy (2000) (2)
- Encoding and Representation of Information Processing in Irregular Computational Matter (2018) (2)
- A ‘Fitness Landscaping’ Comparison of Evolved Robot Control Systems (2000) (2)
- Modeling the Role of Neutral and Selective Mutations in Cancer (2000) (2)
- A Co-evolution model of Scores and Strategies in IPD games: toward the understanding of the emergence of the social morals (2000) (2)
- Molecular Graph Reaction Networks (1996) (2)
- Robots and Autonomous Agents (2000) (2)
- Isothermal Biochemical Amplification in Miniaturized Reactors with Integrated Microvalves (2000) (1)
- Correction: Electronic pH switching of DNA triplex reactions (2015) (1)
- Ultra low-power, -area and -frequency CMOS thyristor based oscillator for autonomous microsystems (2016) (1)
- Coevolving Mutualists Guide Simulated Evolution (2000) (1)
- Ecology and Extinction — Macroevolutionary Extinction Dynamics in a Simulated Ecosystem (2000) (1)
- From quasispecies to quasispaces: coding and cooperation in chemical and electronic systems (2018) (1)
- Autonomous lablet locomotion and active docking by sensomotory electroosmotic drive (2015) (1)
- A Self-Replicating Universal Turing Machine: From von Neumann's Dream to New Embryonic Circuits (2000) (1)
- A $200~\mu \text{m}$ by $100~\mu \text{m}$ Smart Submersible System With an Average Current Consumption of 1.3nA and a Compatible Voltage Converter (2017) (1)
- A. S. Mikhailov: Foundations of Synergetics I Distributed Active Systems. Vol. 51 from: Springer Series in Synergetics. Springer Verlag, Berlin, ISBN 3-540-52775-3, 1990. 187 Pages, Price: DM 110, – (1991) (1)
- Levels of Compartmentalization in Alife (2000) (1)
- Aintz: A study of emergent properties in a model of ant foraging (2000) (1)
- Dynamics of adatoms interacting with metals and metal surfaces: The validity of the description given by Kramers' equation (2009) (1)
- Integrated production/computation IT Architecture for MATCHIT (2013) (1)
- Evolutionary construction algorithms for topology conserving neural nets (1992) (1)
- Evolutionary and Adaptive Dynamics (2000) (1)
- Molecular Quasi-Speciest (2001) (1)
- Microarray of programmable electrochemically active elements (2016) (1)
- Optomagnetic studies of ph-switchable nanoparticle agglutination via triplex dna formation (2016) (1)
- Towards a comprehensive Alife-model of the evolution of the nervous system and adaptive behavior (2000) (1)
- Should seeds fly or not (2000) (1)
- Emergent SMA-Net Robot Control by Coupled Oscillator System (2000) (1)
- Semiotic schemata: Selection units for linguistic cultural evolution (2000) (1)
- Multipolar Reactive DPD: A Novel Tool for Spatially Resolved Systems Biology (2007) (1)
- Living Technology Artificial Systems Embodied Evolution Fet Consultation Workshop @bullet@bullet@bullet Future and Emerging Technologies Fet Consultation Meeting: Living Technology – Artificial Systems – Embodied Evolution Fet Consultation Meeting: Living Technology – Artificial Systems – Embodied E (2011) (0)
- A Discussion of the Use of Artificial Life Models to Evaluate Gould's Hypothesis about Progress in Evolution (2000) (0)
- Artificial Neural Development for Pulsed Neural Network Design (2000) (0)
- Mate Choice: Simple or Complex? * (2000) (0)
- Market-Based Call Routing in Telecommunications Networks using Adaptive Pricing (2000) (0)
- Simulation of evolving systems using FPGA technology (2002) (0)
- Complex organization in multicellularity as a necessity in evolution (2000) (0)
- Equilibrium Distribution of Secondary Structures for Large RNA (1993) (0)
- Reviewers for volume 19 (2017) (0)
- What Can We Learn from the First Evolutionary Simulation Model (2000) (0)
- From quasispecies to quasispaces: coding and cooperation in chemical and electronic systems (2018) (0)
- On the Effect of “Stock Alerts” in an Agent-Based Model of a Financial Market (2000) (0)
- TM-66 swiFFT DSP chip: architecture, algorithms, and applications (1996) (0)
- On permutations derived from integer powers $x^n$ (2019) (0)
- Emergence of Coding and its Specificity as a Physico-Informatic Problem (2015) (0)
- An Ecolab Perspective on the Bedau Evolutionary Statistics (2000) (0)
- Communication., Cooperation., and Collective Behavior (2000) (0)
- Design by Morphogenesis (2000) (0)
- Optomagnetic studies of triplex dna nanoswitches (2016) (0)
- Department of Molecular Information Processing (0)
- Construction of an integrated biomodule composed of microfluidics and digitally controlled microelectrodes for processing biomolecules. (2003) (0)
- Investigating the Mechanisms Underlying Cooperation in Viscous Population Multi-Agent Systems (2000) (0)
- Architecture and a method for configuring a parallel computer (1993) (0)
- Quantification of Microscopic Events in the Process of Long-Term Evolutionary Dynamics (2000) (0)
- The Broader Context (2000) (0)
- Reviewers for Volume 21 (2008) (0)
- Paving the Way for Future Emerging DNA-based Technologies: Computer-Aided Design and Manufacturing of DNA libraries (2012) (0)
- Reviewers of Volume 7 (1980) (0)
- Creating a Physically-based, Virtual-Metabolism with Solid Cellular Automata (2000) (0)
- Editorial (2015) (0)
- Mutualism, Parasitism, and Evolutionary Adaptation (2000) (0)
- Origin of Life, Self-Organization, and Self-Replication (2000) (0)
- From Individuals to Populations, Approaches to the Study of Biological Emergent Phenomena (2000) (0)
- Optomagnetic detection of DNA nanoswitches (2016) (0)
- A minimal artificial subcellular matrix (2012) (0)
- Evolving Insect Locomotion using Non-uniform Cellular Automata (2000) (0)
- A cooperatively coupled system based on the 3SR-reaction (1996) (0)
- Methodological and Technological Applications (2000) (0)
- MoietyProperties.doc 21 References (2002) (0)
- Corrigendum to: "Field programmable chemistry: Integrated chemical and electronic processing of informational molecules towards electronic chemical cells" [Biosystems, (2012) 109: 2-17] (2015) (0)
- Self-organization of biopolymers. Joint Meeting and International Bunsen Discussion Meeting of the Deutsche Bunsen-Gesellschaft für Physikalische Chemie, Jena, April 10–13th, 1994 (1994) (0)
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