John Quackenbush
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American bioinformatician
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Why Is John Quackenbush Influential?
(Suggest an Edit or Addition)According to Wikipedia, John Quackenbush is an American computational biologist and genome scientist. He is a professor of biostatistics and computational biology and a professor of cancer biology at the Dana–Farber Cancer Institute , as well as the director of its Center for Cancer Computational Biology . Quackenbush also holds an appointment as a professor of computational biology and bioinformatics in the Department of Biostatistics at the Harvard School of Public Health.
John Quackenbush's Published Works
Published Works
- TM4: a free, open-source system for microarray data management and analysis. (2003) (4801)
- Minimum information about a microarray experiment (MIAME)—toward standards for microarray data (2001) (4145)
- Supervised risk predictor of breast cancer based on intrinsic subtypes. (2009) (3801)
- The complete genome sequence of the gastric pathogen Helicobacter pylori (1997) (3551)
- The Transcriptional Landscape of the Mammalian Genome (2005) (3394)
- Decoding tumour phenotype by noninvasive imaging using a quantitative radiomics approach (2014) (3237)
- Microarray data normalization and transformation (2002) (2063)
- Genomic sequence of a Lyme disease spirochaete, Borrelia burgdorferi (1997) (2043)
- Genesis: cluster analysis of microarray data (2002) (1820)
- 9) TM4 Microarray Software Suite (2006) (1767)
- TIGR Gene Indices clustering tools (TGICL): a software system for fast clustering of large EST datasets (2003) (1716)
- Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs (2002) (1543)
- The molecular portraits of breast tumors are conserved across microarray platforms (2006) (1436)
- Artificial intelligence in radiology (2018) (1426)
- The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus (1997) (1355)
- TM4 microarray software suite. (2006) (1306)
- Identification of conserved gene expression features between murine mammary carcinoma models and human breast tumors (2007) (1247)
- A Gene Map of the Human Genome (1996) (1080)
- A concise guide to cDNA microarray analysis. (2000) (1017)
- Multiple-laboratory comparison of microarray platforms (2005) (898)
- Genome sequence and comparative analysis of the model rodent malaria parasite Plasmodium yoelii yoelii (2002) (729)
- Corrigendum: Decoding tumour phenotype by noninvasive imaging using a quantitative radiomics approach (2014) (704)
- Functional annotation of a full-length mouse cDNA collection (2001) (682)
- Computational genetics: Computational analysis of microarray data (2001) (617)
- A nucleotide substitution in the promoter of human angiotensinogen is associated with essential hypertension and affects basal transcription in vitro. (1997) (563)
- Promoting coherent minimum reporting guidelines for biological and biomedical investigations: the MIBBI project (2008) (543)
- The TIGR Gene Indices: analysis of gene transcript sequences in highly sampled eukaryotic species (2001) (501)
- Microarray analysis and tumor classification. (2006) (475)
- Independence and reproducibility across microarray platforms (2005) (452)
- The transcriptional network that controls growth arrest and differentiation in a human myeloid leukemia cell line (2009) (441)
- Inconsistency in large pharmacogenomic studies (2013) (441)
- Osteopontin identified as lead marker of colon cancer progression, using pooled sample expression profiling. (2002) (425)
- RNA-Seq analysis in MeV (2011) (396)
- Exome sequencing-based copy-number variation and loss of heterozygosity detection: ExomeCNV (2011) (392)
- The TIGR Gene Indices: reconstruction and representation of expressed gene sequences (2000) (369)
- Molecular staging for survival prediction of colorectal cancer patients. (2005) (367)
- survcomp: an R/Bioconductor package for performance assessment and comparison of survival models (2011) (355)
- Within the fold: assessing differential expression measures and reproducibility in microarray assays (2002) (348)
- Integrative Annotation of 21,037 Human Genes Validated by Full-Length cDNA Clones (2004) (346)
- An STS-based radiation hybrid map of the human genome. (1997) (334)
- A function for cyclin D1 in DNA repair uncovered by protein interactome analyses in human cancers (2011) (319)
- Global Transcription Profiling Reveals Comprehensive Insights into Hypoxic Response in Arabidopsis1[w] (2005) (304)
- A three-gene model to robustly identify breast cancer molecular subtypes. (2012) (303)
- Comprehensive Biostatistical Analysis of CpG Island Methylator Phenotype in Colorectal Cancer Using a Large Population-Based Sample (2008) (303)
- Gene Index analysis of the human genome estimates approximately 120,000 genes (2000) (298)
- Open source software for the analysis of microarray data. (2003) (293)
- Exploratory Study to Identify Radiomics Classifiers for Lung Cancer Histology (2016) (284)
- Histone deacetylase 6-mediated selective autophagy regulates COPD-associated cilia dysfunction. (2013) (265)
- Somatic Mutations Drive Distinct Imaging Phenotypes in Lung Cancer. (2017) (245)
- Understanding Tissue-Specific Gene Regulation (2017) (239)
- Multi-platform, multi-site, microarray-based human tumor classification. (2004) (230)
- Challenges and emerging directions in single-cell analysis (2017) (223)
- The TIGR Gene Indices: clustering and assembling EST and known genes and integration with eukaryotic genomes (2004) (220)
- Enrichment of Gene-Coding Sequences in Maize by Genome Filtration (2003) (219)
- MeV: MultiExperiment Viewer (2010) (219)
- Marked genomic differences characterize primary and secondary glioblastoma subtypes and identify two distinct molecular and clinical secondary glioblastoma entities. (2006) (216)
- Gene expression profiling of lymphoblastoid cell lines from monozygotic twins discordant in severity of autism reveals differential regulation of neurologically relevant genes (2006) (213)
- Classification and risk stratification of invasive breast carcinomas using a real-time quantitative RT-PCR assay (2006) (212)
- A simple spreadsheet-based, MIAME-supportive format for microarray data: MAGE-TAB (2006) (212)
- Comparative Analyses of Potato Expressed Sequence Tag Libraries1 (2003) (202)
- Statistical modeling for selecting housekeeper genes (2004) (193)
- What would you do if you could sequence everything? (2008) (192)
- Transcript Annotation in FANTOM3: Mouse Gene Catalog Based on Physical cDNAs (2006) (189)
- Epstein-Barr virus exploits intrinsic B-lymphocyte transcription programs to achieve immortal cell growth (2011) (186)
- Mitochondrial iron chelation ameliorates cigarette-smoke induced bronchitis and emphysema in mice (2015) (177)
- Transparency and reproducibility in artificial intelligence (2020) (167)
- Interpreting cancer genomes using systematic host perturbations by tumour virus proteins (2012) (167)
- Microarrays--Guilt by Association (2003) (159)
- Profiles of Genomic Instability in High-Grade Serous Ovarian Cancer Predict Treatment Outcome (2012) (158)
- Standards for Microarray Data (2002) (157)
- The TIGR rice genome annotation resource: annotating the rice genome and creating resources for plant biologists (2003) (156)
- Effects of ischemia on gene expression. (2001) (156)
- Passing Messages between Biological Networks to Refine Predicted Interactions (2013) (156)
- Assessing unmodified 70-mer oligonucleotide probe performance on glass-slide microarrays (2003) (155)
- An optimized protocol for analysis of EST sequences. (2000) (155)
- Cross-referencing eukaryotic genomes: TIGR Orthologous Gene Alignments (TOGA). (2002) (151)
- Microarray gene expression data analysis - a beginner's guide (2003) (151)
- Proliferative genes dominate malignancy-risk gene signature in histologically-normal breast tissue (2009) (142)
- Erratum: The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus (1998) (138)
- Epithelial progeny of estrogen-exposed breast progenitor cells display a cancer-like methylome. (2008) (136)
- The African trypanosome genome. (2000) (131)
- Exploring the transcriptome of the malaria sporozoite stage (2001) (130)
- Sex Differences in Gene Expression and Regulatory Networks across 29 Human Tissues. (2020) (129)
- Variance of Gene Expression Identifies Altered Network Constraints in Neurological Disease (2011) (128)
- Seeded Bayesian Networks: Constructing genetic networks from microarray data (2008) (128)
- Relationship of DNA methylation and gene expression in idiopathic pulmonary fibrosis. (2014) (127)
- Eμ-TCL1 mice represent a model for immunotherapeutic reversal of chronic lymphocytic leukemia-induced T-cell dysfunction (2009) (126)
- Orthologous gene-expression profiling in multi-species models: search for candidate genes (2004) (126)
- RESOURCERER: a database for annotating and linking microarray resources within and across species (2001) (125)
- Submission of Microarray Data to Public Repositories (2004) (121)
- Uneven chromosome contraction and expansion in the maize genome. (2006) (120)
- Identification of tumor markers in models of human colorectal cancer using a 19,200-element complementary DNA microarray. (2001) (117)
- Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Tissue Samples (2009) (116)
- Minimum information specification for in situ hybridization and immunohistochemistry experiments (MISFISHIE) (2008) (115)
- Molecular networks in Network Medicine: Development and applications (2020) (115)
- The generation and utilization of a cancer-oriented representation of the human transcriptome by using expressed sequence tags (2003) (115)
- Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. (2001) (113)
- GeneSigDB: a manually curated database and resource for analysis of gene expression signatures (2011) (112)
- Sequence analysis of a rainbow trout cDNA library and creation of a gene index (2004) (111)
- Discrimination of Non-Protein-Coding Transcripts from Protein-Coding mRNA (2006) (111)
- TNF receptor I sensitizes neurons to erythropoietin- and VEGF-mediated neuroprotection after ischemic and excitotoxic injury (2008) (107)
- Viral Perturbations of Host Networks Reflect Disease Etiology (2012) (106)
- GeneSigDB—a curated database of gene expression signatures (2009) (105)
- Angiogenic mRNA and microRNA Gene Expression Signature Predicts a Novel Subtype of Serous Ovarian Cancer (2012) (102)
- Genes transcribed in the salivary glands of female Rhipicephalus appendiculatus ticks infected with Theileria parva. (2004) (102)
- Elevated expression of protein biosynthesis genes in liver and muscle of hibernating black bears (Ursus americanus). (2009) (101)
- An improved empirical bayes approach to estimating differential gene expression in microarray time-course data: BETR (Bayesian Estimation of Temporal Regulation) (2009) (101)
- Data Analysis Strategies in Medical Imaging (2018) (98)
- Genome-wide siRNA screen for mediators of NF-κB activation (2012) (98)
- Data-driven normalization strategies for high-throughput quantitative RT-PCR (2009) (96)
- Regulation of caspase expression and apoptosis by adenomatous polyposis coli. (2003) (95)
- Identification of Src transformation fingerprint in human colon cancer (2002) (92)
- AvGI, an index of genes transcribed in the salivary glands of the ixodid tick Amblyomma variegatum. (2002) (90)
- Integrated Genomics Reveals Convergent Transcriptomic Networks Underlying Chronic Obstructive Pulmonary Disease and Idiopathic Pulmonary Fibrosis. (2016) (90)
- Erratum: The complete genome sequence of the gastric pathogen Helicobacter pylori (Nature (1997) 388 (539-547)) (1997) (89)
- Identification of Novel Kinase Targets for the Treatment of Estrogen Receptor–Negative Breast Cancer (2009) (85)
- HPV16 E7 oncogene expression in normal human epithelial cells causes molecular changes indicative of an epithelial to mesenchymal transition. (2009) (85)
- Enhancing reproducibility in cancer drug screening: how do we move forward? (2014) (84)
- Sources of variation in baseline gene expression levels from toxicogenomics study control animals across multiple laboratories (2008) (84)
- Estimating Sample-Specific Regulatory Networks (2015) (83)
- Cardiac transcriptional response to acute and chronic angiotensin II treatments. (2004) (81)
- BmiGI: a database of cDNAs expressed in Boophilus microplus, the tropical/southern cattle tick. (2005) (81)
- Microarray analysis of the in vivo effects of hypophysectomy and growth hormone treatment on gene expression in the rat. (2001) (81)
- A Genome-Wide Aberrant RNA Splicing in Patients with Acute Myeloid Leukemia Identifies Novel Potential Disease Markers and Therapeutic Targets (2013) (81)
- Grape-seed derived procyanidins interfere with adipogenesis of 3T3-L1 cells at the onset of differentiation (2005) (81)
- Functional interactors of three genome-wide association study genes are differentially expressed in severe chronic obstructive pulmonary disease lung tissue (2017) (80)
- Porcine gene discovery by normalized cDNA-library sequencing and EST cluster assembly (2002) (79)
- Molecular processes during fat cell development revealed by gene expression profiling and functional annotation (2005) (78)
- MicroRNA paraffin-based studies in osteosarcoma reveal reproducible independent prognostic profiles at 14q32 (2013) (77)
- Universal RNA reference materials for gene expression. (2004) (77)
- Genomics. Microarrays--guilt by association. (2003) (76)
- DNA methylation profiling in human lung tissue identifies genes associated with COPD (2016) (74)
- Comparative gene expression analysis in mouse models for multiple sclerosis, Alzheimer's disease and stroke for identifying commonly regulated and disease-specific gene changes. (2010) (73)
- Exploring regulation in tissues with eQTL networks (2017) (72)
- Data standards for Omics data: the basis of data sharing and reuse. (2011) (70)
- Agreement in breast cancer classification between microarray and quantitative reverse transcription PCR from fresh-frozen and formalin-fixed, paraffin-embedded tissues. (2007) (70)
- Data standards for 'omic' science (2004) (65)
- Section 7: Bioinformatics: Computational Approaches to Analysis of DNA Microarray Data (2006) (65)
- Smooth Quantile Normalization (2016) (62)
- A network model for angiogenesis in ovarian cancer (2015) (62)
- Research and applications: Comparison and validation of genomic predictors for anticancer drug sensitivity (2013) (61)
- COLD-PCR enrichment of rare cancer mutations prior to targeted amplicon resequencing. (2012) (61)
- Merkel Cell Polyomavirus Small T Antigen Promotes Pro-Glycolytic Metabolic Perturbations Required for Transformation (2016) (59)
- Papers on normalization, variable selection, classification or clustering of microarray data (2009) (59)
- Gene Regulatory Network Analysis Identifies Sex-Linked Differences in Colon Cancer Drug Metabolism. (2018) (59)
- Helping people adjust to the death of a pet. (1984) (59)
- Analysis of bovine mammary gland EST and functional annotation of the Bos taurus gene index (2002) (58)
- Haploinsufficiency of Hedgehog interacting protein causes increased emphysema induced by cigarette smoke through network rewiring (2015) (58)
- Toward clinical genomics in everyday medicine: perspectives and recommendations (2016) (57)
- Gender-Specific Molecular and Clinical Features Underlie Malignant Pleural Mesothelioma. (2016) (57)
- Functional classification analysis of somatically mutated genes in human breast and colorectal cancers. (2008) (57)
- Helsinki discord? A controversial declaration. (2000) (56)
- Osteopontin identified as colon cancer tumor progression marker. (2003) (55)
- Synchronous global assessment of gene and protein expression in colorectal cancer progression. (2005) (55)
- Murine Macrophage Transcriptional Responses to Bacillus anthracis Infection and Intoxication (2005) (55)
- Epstein–Barr virus nuclear antigen leader protein localizes to promoters and enhancers with cell transcription factors and EBNA2 (2013) (54)
- High‐throughput amplicon scanning of the TP53 gene in breast cancer using high‐resolution fluorescent melting curve analyses and automatic mutation calling (2008) (53)
- Living-Donor Transplants Reexamined (2003) (52)
- ESR1 gene amplification in breast cancer: a common phenomenon? (2008) (52)
- Transcriptional divergence of the duplicated oxidative stress-responsive genes in the Arabidopsis genome. (2004) (52)
- Extracting biology from high-dimensional biological data (2007) (52)
- Physiogenomic resources for rat models of heart, lung and blood disorders (2006) (52)
- Characterization and Clinical Evaluation of CD10+ Stroma Cells in the Breast Cancer Microenvironment (2012) (51)
- iBBiG: iterative binary bi-clustering of gene sets (2012) (51)
- Defining an informativeness metric for clustering gene expression data (2011) (50)
- Human Lung DNA Methylation Quantitative Trait Loci Colocalize with Chronic Obstructive Pulmonary Disease Genome‐Wide Association Loci (2018) (49)
- Epstein–Barr virus nuclear antigen 3C regulated genes in lymphoblastoid cell lines (2010) (49)
- Rice bioinformatics. analysis of rice sequence data and leveraging the data to other plant species. (2001) (49)
- Revisiting inconsistency in large pharmacogenomic studies (2015) (48)
- Testing CP and CPT violation in the neutral kaon system at a phi factory. (1992) (48)
- Left ventricular global transcriptional profiling in human end-stage dilated cardiomyopathy. (2009) (48)
- Anchoring of rice BAC clones to the rice genetic map in silico. (2000) (48)
- Career issues. (1994) (47)
- Cancer subtype identification using somatic mutation data (2017) (47)
- Viscoelastic behaviour in indium-tin alloys over a wide range of frequencies and times (1996) (47)
- Continued discovery of transcriptional units expressed in cells of the mouse mononuclear phagocyte lineage. (2003) (46)
- Shear-induced Cyclooxygenase-2 via a JNK2/c-Jun-dependent Pathway Regulates Prostaglandin Receptor Expression in Chondrocytic Cells* (2003) (46)
- attract: A Method for Identifying Core Pathways That Define Cellular Phenotypes (2011) (46)
- Genetic control of gene expression at novel and established chronic obstructive pulmonary disease loci. (2015) (46)
- Gene expression analysis uncovers novel hedgehog interacting protein (HHIP) effects in human bronchial epithelial cells. (2013) (45)
- Epigenetic remodeling regulates transcriptional changes between ovarian cancer and benign precursors. (2016) (45)
- Sexually-dimorphic targeting of functionally-related genes in COPD (2014) (45)
- Bipartite Community Structure of eQTLs (2015) (45)
- Ovarian reserve status in young women is associated with altered gene expression in membrana granulosa cells. (2012) (44)
- Inference and validation of predictive gene networks from biomedical literature and gene expression data. (2014) (43)
- Tissue-aware RNA-Seq processing and normalization for heterogeneous and sparse data (2016) (43)
- Zero-for-Three? (2002) (43)
- Bioinformatics for next generation sequencing. (2009) (42)
- Data standards: a call to action. (2006) (42)
- Gene Expression Signature of Normal Cell-of-Origin Predicts Ovarian Tumor Outcomes (2013) (41)
- Decomposition of Gene Expression State Space Trajectories (2009) (41)
- Stem Cell-Like Gene Expression in Ovarian Cancer Predicts Type II Subtype and Prognosis (2013) (41)
- Revisiting inconsistency in large pharmacogenomic studies (2015) (41)
- CRX Is a Diagnostic Marker of Retinal and Pineal Lineage Tumors (2009) (41)
- Living-donor transplants reexamined: experts cite growing concerns about safety of donors. (2003) (41)
- Multisystem Analysis of Mycobacterium tuberculosis Reveals Kinase-Dependent Remodeling of the Pathogen-Environment Interface (2018) (41)
- Standardizing the standards (2006) (41)
- An open letter to the scientific journals (2002) (40)
- Microarray Analysis of the in Vivo Effects of Hypophysectomy and Growth Hormone Treatment on Gene Expression in the Rat. (2001) (40)
- Obesity Is Now on Everyone's Plate. (2004) (40)
- The TIGR Maize Database (2005) (40)
- Development and evaluation of an automated annotation pipeline and cDNA annotation system. (2003) (39)
- CGHAnalyzer: a stand-alone software package for cancer genome analysis using array-based DNA copy number data (2005) (39)
- Genome-Wide Sex and Gender Differences in Cancer (2020) (39)
- Integrated Analysis of Multiple Microarray Datasets Identifies a Reproducible Survival Predictor in Ovarian Cancer (2011) (39)
- NOTCH2 and FLT3 gene mis-splicings are common events in patients with acute myeloid leukemia (AML): new potential targets in AML. (2014) (39)
- Regulatory network changes between cell lines and their tissues of origin (2017) (38)
- Use of RNA and genomic DNA references for inferred comparisons in DNA microarray analyses. (2002) (38)
- Gene expression analyses of Arabidopsis chromosome 2 using a genomic DNA amplicon microarray. (2003) (38)
- Confounding effects in "A six-gene signature predicting breast cancer lung metastasis". (2009) (37)
- First-Principles Free-Vortex Wake Analysis for Helicopters and Tiltrotors (2003) (37)
- Canonical NF-κB Activation Is Essential for Epstein-Barr Virus Latent Membrane Protein 1 TES2/CTAR2 Gene Regulation (2011) (37)
- Poised to challenge need for sleep, "wakefulness enhancer" rouses concerns. (2004) (36)
- Characterization of a Vibrio vulnificus LysR homologue, HupR, which regulates expression of the haem uptake outer membrane protein, HupA. (2001) (36)
- Novel application of structural equation modeling to correlation structure analysis of CpG island methylation in colorectal cancer. (2010) (36)
- BatchQC: interactive software for evaluating sample and batch effects in genomic data (2016) (36)
- The limits of log-ratios (2004) (36)
- A robust method for the amplification of RNA in the sense orientation (2005) (35)
- Analyzing networks of phenotypes in complex diseases: methodology and applications in COPD (2014) (35)
- A cricket Gene Index: a genomic resource for studying neurobiology, speciation, and molecular evolution (2007) (34)
- Plasma Exosome Profiling of Cancer Patients by a Next Generation Systems Biology Approach (2017) (34)
- Genetic regulation of endotoxin-induced airway disease. (2004) (34)
- The death of a pet. How it can affect owners. (1985) (34)
- Significance Analysis of Prognostic Signatures (2013) (33)
- Predictive networks: a flexible, open source, web application for integration and analysis of human gene networks (2011) (32)
- Integrative and comparative genomics analysis of early hepatocellular carcinoma differentiated from liver regeneration in young and old (2010) (32)
- WebMeV: A Cloud Platform for Analyzing and Visualizing Cancer Genomic Data. (2017) (32)
- Isolation of circulating microRNAs from microvesicles found in human plasma. (2014) (31)
- Differential connectivity of gene regulatory networks distinguishes corticosteroid response in asthma (2017) (31)
- Biotechnology: Crossing the barrier (2010) (30)
- Pay attention: ritalin acts much like cocaine. (2001) (30)
- Ibogaine Therapy: A 'Vast, Uncontrolled Experiment' (2005) (30)
- The cyclin D1-CDK4 oncogenic interactome enables identification of potential novel oncogenes and clinical prognosis (2014) (29)
- Expression Profiling of Archival Tumors for Long-term Health Studies (2012) (29)
- Experimental drugs take aim at obesity. (2003) (29)
- THE SCHISTOSOMA MANSONI GENE INDEX: GENE DISCOVERY AND BIOLOGY BY RECONSTRUCTION AND ANALYSIS OF EXPRESSED GENE SEQUENCES (2003) (29)
- RamiGO: an R/Bioconductor package providing an AmiGO Visualize interface (2013) (29)
- Assessment of pharmacogenomic agreement (2016) (29)
- Low health literacy called a major problem. (2004) (29)
- Sexual dimorphism in gene expression and regulatory networks across human tissues (2016) (29)
- Assessment of microRNA differential expression and detection in multiplexed small RNA sequencing data (2015) (28)
- Gene discovery in Plasmodium vivax through sequencing of ESTs from mixed blood stages. (2005) (28)
- An imprinted non-coding genomic cluster at 14q32 defines clinically relevant molecular subtypes in osteosarcoma across multiple independent datasets (2017) (28)
- Gene Expression Variability as a Unifying Element of the Pluripotency Network (2014) (28)
- Therapeutic Implications of GIPC1 Silencing in Cancer (2010) (28)
- Novel Eulerian Vorticity Transport Wake Module for Rotorcraft Flow Analysis (2007) (27)
- do not publish (2008) (27)
- Detecting phenotype-driven transitions in regulatory network structure (2018) (26)
- Gaussian and Mixed Graphical Models as (multi-)omics data analysis tools. (2020) (26)
- Development of the Minimum Information Specification for In Situ Hybridization and Immunohistochemistry Experiments (MISFISHIE). (2006) (26)
- Nac1 Coordinates a Sub-network of Pluripotency Factors to Regulate Embryonic Stem Cell Differentiation. (2016) (26)
- Extracting meaning from functional genomics experiments. (2005) (26)
- Serotonin receptor 2B signaling with interstitial cell activation and leaflet remodeling in degenerative mitral regurgitation. (2018) (25)
- Next-generation sequencing and microarray-based interrogation of microRNAs from formalin-fixed, paraffin-embedded tissue: preliminary assessment of cross-platform concordance. (2013) (25)
- The quest for the mechanisms of life (2003) (25)
- Knee Replacement Underused, Says Panel (2004) (25)
- Sequential Binary Gene Ratio Tests Define a Novel Molecular Diagnostic Strategy for Malignant Pleural Mesothelioma (2013) (25)
- Ensemble genomic analysis in human lung tissue identifies novel genes for chronic obstructive pulmonary disease (2018) (25)
- Learning to share. (2014) (25)
- Time‐series integrated “omic” analyses to elucidate short‐term stress‐induced responses in plant liquid cultures (2009) (25)
- Microarray Data Standards: An Open Letter (2004) (25)
- What's the connection? No easy answers for people with eating disorders and drug abuse. (2001) (24)
- Integrating transcriptional and protein interaction networks to prioritize condition-specific master regulators (2015) (24)
- Social work services for bereaved pet owners: a retrospective case study in a veterinary teaching hospital (1983) (24)
- Sonic hedgehog promotes CD4+ T lymphocyte proliferation and modulates the expression of a subset of CD28-targeted genes. (2006) (24)
- Paenibacillus infection with frequent viral coinfection contributes to postinfectious hydrocephalus in Ugandan infants (2020) (24)
- WebMeV: a Cloud Platform for Analyzing and Visualizing Cancer Genomic Data (2017) (23)
- Breast Cancer Racial Gap Examined (2003) (23)
- Microarray blob-defect removal improves array analysis (2007) (23)
- Many say adult stem cell reports overplayed. (2001) (23)
- Suicide prevention plan calls for physicians' help. (2001) (23)
- Top-down standards will not serve systems biology (2006) (23)
- The Impact of Stroma Admixture on Molecular Subtypes and Prognostic Gene Signatures in Serous Ovarian Cancer (2019) (23)
- MeSHer: identifying biological concepts in microarray assays based on PubMed references and MeSH terms (2005) (22)
- Old Drugs for a New Bug (2003) (22)
- Why Is There a Lack of Consensus on Molecular Subgroups of Glioblastoma? Understanding the Nature of Biological and Statistical Variability in Glioblastoma Expression Data (2011) (22)
- High Fidelity Rotor Aerodynamic Module for Real-Time Rotorcraft Flight Simulation (2008) (22)
- POPcorn: An Online Resource Providing Access to Distributed and Diverse Maize Project Data (2011) (22)
- The importance of transparency and reproducibility in artificial intelligence research (2020) (20)
- Scientists find connections in the brain between physical and emotional pain. (2003) (20)
- Poly-ligand profiling differentiates trastuzumab-treated breast cancer patients according to their outcomes (2018) (20)
- From 'omes to biology. (2006) (20)
- Addiction Poorly Understood by Clinicians (2003) (20)
- Differentiating progressive from nonprogressive T1 bladder cancer by gene expression profiling: applying RNA-sequencing analysis on archived specimens. (2014) (20)
- Standards for microarray data: an open letter. (2004) (19)
- Addiction research. Ibogaine therapy: a 'vast, uncontrolled experiment'. (2005) (19)
- Sewage yields clues to SV40 transmission. (2002) (19)
- Nongenic cancer-risk SNPs affect oncogenes, tumour-suppressor genes, and immune function (2019) (19)
- BRCA1 and RNAi factors promote repair mediated by small RNAs and PALB2–RAD52 (2021) (19)
- Cystic Fibrosis Gene Testing a Challenge (2003) (18)
- Using the DFCI Gene Index Databases for Biological Discovery (2003) (18)
- Ecstasy experts want realistic messages. (2001) (18)
- Cancer fraud case stuns research community, prompts reflection on peer review process. (2006) (18)
- New clinical trials policy at FDA (2006) (18)
- Using graph convolutional neural networks to learn a representation for glycans (2021) (18)
- Data reporting standards: making the things we use better (2009) (18)
- GRAND: a database of gene regulatory network models across human conditions (2021) (18)
- HSP-90 inhibitors promise to complement cancer therapies (2006) (18)
- Integrating computationally assembled mouse transcript sequences with the Mouse Genome Informatics (MGI) database (2003) (17)
- Inferring steady state single-cell gene expression distributions from analysis of mesoscopic samples (2006) (17)
- Revisiting inconsistency in large pharmacogenomic studies. (2017) (17)
- Exploring Aerodynamic Methods for Mitigating Brownout (2009) (17)
- Breast cancer racial gap examined: no easy answers to explain disparities in survival. (2003) (17)
- Use of a multi-virus array for the study of human viral and retroviral pathogens: gene expression studies and ChIP-chip analysis (2004) (17)
- Knee replacement underused, says panel: useful option when nonsurgical therapies fail. (2004) (17)
- lionessR: single sample network inference in R (2019) (17)
- Genomics and proteomics of lung disease: conference summary. (2007) (17)
- A guide to microarray experiments-an open letter to the scientific journals (2002) (17)
- Histopathological Image QTL Discovery of Immune Infiltration Variants (2018) (16)
- Estimating drivers of cell state transitions using gene regulatory network models (2016) (16)
- Stem Cells Step Closer to the Clinic (2001) (16)
- Biomarker correlation network in colorectal carcinoma by tumor anatomic location (2017) (16)
- GCOD - GeneChip Oncology Database (2011) (16)
- Clinical and Molecular Analysis of Pathologic Fracture-associated Osteosarcoma: MicroRNA profile Is Different and Correlates with Prognosis. (2019) (15)
- Ebola vaccines tested in humans, monkeys. (2004) (15)
- Easing the elderly online in search of health information. (2001) (15)
- An STS content map of human chromosome 11: localization of 910 YAC clones and 109 islands. (1995) (15)
- Proceedings of the third international molecular pathological epidemiology (MPE) meeting (2016) (15)
- Comparative genome-wide transcriptional analysis of human left and right internal mammary arteries. (2014) (15)
- Hormone replacement therapy falls out of favor with expert committee. (2002) (15)
- Volunteers see the world and help its people. (2002) (15)
- Physical mapping of complex genomes by sampled sequencing: a theoretical analysis. (1995) (14)
- Expression Quantitative Trait loci (QTL) in tumor adjacent normal breast tissue and breast tumor tissue (2017) (14)
- Monitoring of representational difference analysis subtraction procedures by global microarrays. (2002) (14)
- Soy and prostate cancer study results mixed. (2007) (14)
- Tumor associated seizures in glioblastomas are influenced by survival gene expression in a region-specific manner: A gene expression imaging study (2014) (14)
- Does video game violence sow aggression? Studies probe effects of virtual violence on children. (2004) (14)
- FDA considers tightening regulations for direct-to-consumer advertising. (2005) (14)
- Yeast artificial chromosome cloning of 3.2 megabases within chromosomal band 11q24 closely linking c-ets 1 and Fli-1 and encompassing the Ewing sarcoma breakpoint. (1994) (14)
- PyPanda: a Python package for gene regulatory network reconstruction (2016) (13)
- Gene-environment interactions reveal a homeostatic role for cholesterol metabolism during dietary folate perturbation in mice. (2008) (13)
- Multistrain genetic comparisons reveal CCR5 as a receptor involved in airway hyperresponsiveness. (2006) (13)
- Report and abstracts of the Sixth International Workshop on Human Chromosome 21 Mapping 1996. Cold Spring Harbor, New York, USA. May 6-8,1996. (1997) (13)
- New vaccine decreases rate of nosocomial infections. (2001) (13)
- Congressional Autism Hearings Continue (2001) (13)
- Merits of embryo screening debated. (2004) (13)
- The kinetic requirements of extreme qPCR (2019) (13)
- Addiction poorly understood by clinicians: experts say attitudes, lack of knowledge hinder treatment. (2003) (13)
- An open letter on microarray data from the MGED Society. (2004) (13)
- Dynamic Interface Simulation Using a Coupled Vortex-Based Ship Airwake and Rotor Wake Model (2002) (13)
- Experts urge bioterrorism readiness. (2001) (13)
- Nutrients for prevention: negative trials send researchers back to drawing board. (2009) (13)
- Constructing gene regulatory networks using epigenetic data (2020) (12)
- Initial Validation of a Machine Learning-Derived Prognostic Test (KidneyIntelX) Integrating Biomarkers and Electronic Health Record Data To Predict Longitudinal Kidney Outcomes. (2020) (12)
- Football brain injuries draw increased scrutiny. (2002) (12)
- Diet-induced weight loss leads to a switch in gene regulatory network control in the rectal mucosa. (2016) (12)
- PUMA: PANDA Using MicroRNA Associations (2019) (12)
- Old drugs for a new bug: influenza, HIV drugs enlisted to fight SARS. (2003) (12)
- A tiered hidden Markov model characterizes multi-scale chromatin states. (2013) (12)
- Aeromechanical Analysis Tools for Design and Simulation of VTOL UAV Systems (2004) (12)
- Researchers say changes needed in recruitment policies for NIH trials. (2003) (12)
- In-Office Opiate Treatment Not a Panacea (2003) (12)
- The underlying principles of scientific publication. (2002) (12)
- Out of tragedy, identification innovation. (2002) (12)
- At polio's end game, strategies differ. (2001) (11)
- Cystic fibrosis gene testing a challenge: experts say widespread use is creating unnecessary risks. (2003) (11)
- Addiction treatment strives for legitimacy. (2002) (11)
- Estimating gene regulatory networks with pandaR (2017) (11)
- DNA Methylation is Predictive of Mortality in Current and Former Smokers. (2020) (11)
- The social context of pet loss (1982) (11)
- The power of public access: the human genome project and the scientific process (2001) (11)
- Viscoelastic behavior over a wide range of time and frequency in tin alloys : SnCd and SnSb (1996) (10)
- Increasing R01 competition concerns researchers. (2006) (10)
- Cancer Informatics: New Tools for a Data-Driven Age in Cancer Research. (2017) (10)
- Future eye implants focus on neurotransmitters. (2002) (10)
- Melanoma mimic: a case of multiple pagetoid Spitz nevi. (2012) (10)
- Not so fast: research on infectious links to MS questioned. (2001) (10)
- Medicare to cover routine care costs in clinical trials. (2000) (9)
- Study concludes that moderate PSA levels are unrelated to prostate cancer outcomes. (2002) (9)
- High performance computing of gene regulatory networks using a message-passing model (2015) (9)
- Genetic basis of murine antibacterial defense to streptococcal lung infection (2007) (9)
- Recent studies show limited association of fruit and vegetable consumption and cancer risk. (2005) (9)
- Methadone Regulations Overhauled (2001) (9)
- Congressional autism hearings continue: no evidence MMR vaccine causes disorder. (2001) (9)
- Gene chips inch toward the clinic. (2003) (9)
- New diagnostic criteria for MS issued. (2001) (9)
- Mixed message on prescription drug abuse. (2001) (9)
- The genetics of innate immunity in the lung. (2003) (9)
- Mental Health Parity (2003) (9)
- New CAM Database Online (2001) (9)
- Safikhani et al. reply (2016) (9)
- Developing countries face growing cancer burden. (2006) (9)
- MicroRNA-mRNA networks define translatable molecular outcome phenotypes in osteosarcoma (2019) (9)
- Stem cells step closer to the clinic: paralysis partially reversed in rats with ALS-like disease. (2001) (9)
- Concise Guide to cDNA Microarray Analysis – II (2001) (9)
- Corrections: The complete genome sequence of the gastric pathogen Helicobacter pylori (1997) (9)
- Reviewer leaked Avandia study to drug firm (2008) (9)
- Many questions, few answers for testosterone replacement therapy. (2003) (9)
- Experts wrestle with social, ethical implications of human genome research. (2001) (8)
- Predicting genotype-specific gene regulatory networks (2021) (8)
- In-office opiate treatment "not a panacea": physicians slow to embrace therapeutic option. (2003) (8)
- Minimum information about a functional genomics experiment: the state of microarray standards and their extension to other technologies (2004) (8)
- Regulatory Network of PD1 Signaling Is Associated with Prognosis in Glioblastoma Multiforme (2021) (8)
- Gene Regulatory Network Inference as Relaxed Graph Matching (2020) (8)
- Weighing our measures of gene expression (2006) (8)
- High-Throughput Sequencing in Respiratory, Critical Care, and Sleep Medicine Research. An Official American Thoracic Society Workshop Report (2019) (8)
- Open-source software accelerates bioinformatics (2003) (8)
- Perspective: Learning to share (2014) (8)
- Safikhani et al. reply (2016) (8)
- Tea therapy? Out of the cup, into the lab. (1998) (8)
- Plant database resources at The Institute for Genomic Research. (2007) (8)
- On Minimum Induced Power of the Helicopter Rotor (2005) (8)
- Viva la revolution! A report from the FANTOM Meeting (2000) (8)
- Annals of Internal Medicine's Harold Sox, MD, Discusses Physician Charter of Professionalism (2001) (8)
- Proceedings of the fourth international molecular pathological epidemiology (MPE) meeting (2019) (7)
- Kenneth W. Kizer, MD, MPH: Health Care Quality Evangelist (2001) (7)
- NIH launches PubMed Central. (2000) (7)
- Raloxifene prevails in STAR trial, may face easier road to acceptance than previous drugs. (2006) (7)
- HIV vaccine efforts inch forward. (2001) (7)
- Search for antiproton decay at the Fermilab antiproton accumulator. (1994) (7)
- Corrigendum: Multiple-laboratory comparison of microarray platforms (2005) (7)
- Optimized growth conditions for direct amplification of cDNA clone inserts from culture. (2001) (7)
- CDC unveils first report on toxins in people. (2001) (7)
- A network-based approach to eQTL interpretation and SNP functional characterization (2016) (7)
- Testicular cancer seen as "stalking horse" for other cancers. (1999) (7)
- Genome analysis yields mutations linked to hereditary prostate cancer. (2002) (7)
- Medical marijuana center opens doors. (2003) (7)
- Gene Targeting in Disease Networks (2021) (7)
- Imaging studies reveal brain changes in children with bipolar disorder. (2003) (7)
- nEASE: a method for gene ontology subclassification of high-throughput gene expression data (2012) (7)
- Plan B for "Plan B"? FDA denies OTC sales of emergency contraceptive. (2004) (6)
- A microRNA activity map of human mesenchymal tumors: connections to oncogenic pathways; an integrative transcriptomic study (2012) (6)
- Using a Single Daytime Performance Test to Identify Most Individuals at High-Risk for Performance Impairment during Extended Wake (2019) (6)
- Using the TIGR Gene Index Databases for Biological Discovery (2003) (6)
- Relevance of different prior knowledge sources for inferring gene interaction networks (2014) (6)
- Identification of differentially expressed gene sets using the Generalized Berk-Jones statistic (2019) (6)
- Multiple-input multiple-output causal strategies for gene selection (2011) (6)
- Symposium on the human-companion animal bond. (1985) (6)
- EPA feels heat over flame retardant (2008) (6)
- Need for donor organs spurs thought and action. (2002) (6)
- Folate gains momentum as a vehicle for drug delivery. (2000) (6)
- Openness in biomedical research collides with heightened security concerns. (2003) (6)
- Federal plan asks for increased drug treatment. (2000) (6)
- National autism summit charts a path through a scientific, clinical wilderness. (2004) (6)
- Prediction of rapid kidney function decline using machine learning combining blood biomarkers and electronic health record data (2019) (6)
- DRAGON: Determining Regulatory Associations using Graphical models on multi-Omic Networks (2021) (6)
- Preventing prostate cancer: new analyses put finasteride back on the map. (2008) (6)
- 2003 Nobels awarded for pioneering research in MRI, cellular channels. (2003) (6)
- The Bacterial and Viral Complexity of Postinfectious Hydrocephalus in Uganda (2020) (6)
- Catalysis Clustering with GAN by Incorporating Domain Knowledge (2020) (6)
- Response to Shields: 'MIAME, we have a problem'. (2006) (6)
- Transforming Mental Health Care (2003) (5)
- A Clue to Long Life (2002) (5)
- predictionet: Inference for predictive networks designed for (but not limited to) genomic data: R/Bioconductor (2012) (5)
- Department of Pathology, Thom as Jeffe rson University, Identific ation of conserved gene expression features between murine mammary carcinoma models and human breast tumors. (2007) (5)
- Virtual worlds, real science: Epidemiologists, social scientists flock to online world (2009) (5)
- Nursing Shortage Confirmed (2001) (5)
- Wrestling with SUMO and bio-ontologies (2006) (5)
- Leukemia drug heralds molecularly targeted era. (2000) (5)
- Addiction Treatment Strives for Legitimacy (2002) (5)
- Prostate disease begs understanding. (2001) (5)
- Mutational analysis clopidogrel resistance and platelet function in patients scheduled for coronary artery bypass grafting. (2013) (5)
- Medical Error Reporting (2002) (5)
- Small loans yield big health profits. (2004) (5)
- US aims to tighten rules on direct-to-consumer drug ads (2007) (5)
- Alarm Sounded on Fake, Tainted Drugs (2003) (4)
- At the cloning circus sideshows abound, while scientists seek a wider audience. (2001) (4)
- Distributed Multi-Vehicle Simulation Including High-Order Airwake Representation (2004) (4)
- Lung screening study to test popular CT scans. (2002) (4)
- MIACA – Minimum Information About a Cellular Assay: Standardized description of cell-based functional assay projects (2013) (4)
- Experts advise on potassium iodide use: no protection against "dirty bombs". (2003) (4)
- Correction: Statistical modeling for selecting housekeeper genes (2008) (4)
- Group calls for stricter rules for assisted reproduction, ban of "extreme" technologies. (2004) (4)
- Biophysical annotation and representation of CellML models (2009) (4)
- The impact of stroma on the discovery of molecular subtypes and prognostic gene signatures in serous ovarian cancer (2018) (4)
- Garlic Prevents Plaque . . . (2002) (4)
- CXCR4 pathway associated with family history of melanoma (2013) (4)
- Panel backs new NIH center devoted to translational medicine (2011) (4)
- Health agencies update. HIV and heroin interactions. (2001) (4)
- Expression Profiler: A suite of web-based tools for the analysis of microarray gene expression data (2001) (4)
- Characterization of carboxypeptidase I of mung bean seeds (1995) (4)
- UK Licenses Human Embryo Creation (2003) (4)
- Alarm sounded on fake, tainted drugs: some wholesalers are a weak link in a dangerous chain. (2003) (4)
- Breast cancer prevention study aims to overcome drug bias. (2001) (4)
- Policy and regulations (2006) (4)
- Scaling up Continuous-Time Markov Chains Helps Resolve Underspecification (2021) (4)
- Talking With Alan I. Leshner, PhD, National Institute on Drug Abuse Director (2001) (4)
- Decade of work shows depression is physical. (2002) (4)
- The policy outlook from the Hill (2007) (4)
- Education needed to expand SCHIP eligibility. (2002) (4)
- Human Embryos Cloned for Stem Cells (2004) (4)
- A Novel Deep Learning Model by Stacking Conditional Restricted Boltzmann Machine and Deep Neural Network (2020) (4)
- An optimized predictive strategy for interactome mapping. (2008) (4)
- Histone deacetylase 6-mediated selective autophagy regulates COPD-associated cilia dysfunction. (2020) (4)
- Reverse Transcriptase Kinetics for One-step RT-PCR. (2020) (4)
- Correction: Gene Regulatory Network Analysis Identifies Sex-Linked Differences in Colon Cancer Drug Metabolism. (2019) (4)
- Warming to a cold war herb: Soviet secret finds its way west (2009) (3)
- Inconsistency in large pharmacogenomic (2013) (3)
- Autism interventions come of age. (2004) (3)
- NIH Institutes launch joint venture to map cancer genome. (2006) (3)
- Creating a successful after-hours clinic. (2004) (3)
- Shining light on breast tumors. (1999) (3)
- Genome-Wide DNA Methylation Patterns In Interstitial Lung Disease (ild) And Chronic Obstructive Lung Disease (COPD) (2011) (3)
- Naval hospital ship heads for home after treating casualties of Gulf war. (2003) (3)
- Challenges and emerging directions in single-cell analysis (2017) (3)
- Almost serendipity: alcoholism drug reverses drug resistance in vitro. (2000) (3)
- UK licenses human embryo creation: "Dolly" cloner to create embryos for research. (2003) (3)
- Abstract 6569: Regulatory networks of liver carcinoma reveal sex specific patterns of gene regulation (2020) (3)
- Knowledge-Based Access to the Bio-Medical Literature, Ontologically-Grounded Experiments for the TREC 2003 Genomics Track (2003) (3)
- Smoke this: genetics research begins to uncloud who gets hooked. (1998) (3)
- World health focus of Fogarty International Center. (2002) (3)
- HIV and Heroin Interactions (2001) (3)
- An online notebook resource for reproducible inference, analysis and publication of gene regulatory networks (2022) (3)
- Large-scale screening of yeast artificial chromosome libraries using PCR. (1994) (3)
- AI Methods for Analyzing Microarray Data (2009) (3)
- Cascade Size Distributions and Why They Matter (2019) (3)
- Regulation of PD1 signaling is associated with prognosis in glioblastoma multiforme (2021) (3)
- Effect of mifepristone approval on research remains to be seen. (2000) (3)
- Time-Series Integrated Metabolomic and Transcriptional Profiling Analyses (2007) (3)
- CDC unveils SARS plan: emphasizes rapid identification, communication. (2003) (3)
- Detection network gives early cancer tests a push. (2000) (3)
- Private efforts pick up stem cell slack. (2004) (3)
- Transcript annotation in FANTOM 3 (2006) (3)
- Experts Advise on Potassium Iodide Use (2003) (3)
- Multi-omic regulatory networks capture downstream effects of kinase inhibition in Mycobacterium tuberculosis (2019) (3)
- Cascade Size Distributions: Why They Matter and How to Compute Them Efficiently (2021) (3)
- The siren song of disease eradication: is it out of tune with the times? (2003) (3)
- Folic Acid and Parkinson Disease (2002) (3)
- Consumer groups look to improve adverse event reporting systems. (2005) (3)
- Donald M. Berwick, MD, MPP (2004) (3)
- Genomics of Theileria parva (2002) (3)
- Despite finding anthrax vaccine useful, IOM recommends seeking a better one. (2002) (3)
- Variable Fidelity Preliminary Design Tools for Advanced Vertical Flight Vehicles (2010) (3)
- For EGFR research, new targeted drugs mean new questions. (2005) (3)
- Cell Biology Update (2001) (3)
- Comprehensive genomic profiling of the lung transcriptome in emphysema and idiopathic pulmonary fibrosis using RNA-Seq (2012) (3)
- Discovery of widespread transcription initiation at microsatellites predictable by sequence-based deep neural network (2021) (2)
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- Histopathological image QTL discovery of thyroid autoimmune disease variants (2017) (2)
- Tiltrotor/Tiltwing Performance Enhancement Via Active On-Blade Flaps (2010) (2)
- Cause of progeria's premature aging found: expected to provide insight into normal aging process. (2003) (2)
- KTeV design report: Physics goals, technical components, and detector costs (1992) (2)
- Traditional medicine, novel partnership (2006) (2)
- It is time to end the patenting of software (2006) (2)
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- Consensus panel recommendations for treatment of early breast cancer. (2000) (2)
- errata: The yeast genome directory (1997) (2)
- The melting snows of Kilimanjaro (2009) (2)
- Brain sabotages sobriety, right on cue: Pavlov's progeny provide pictures of alcoholism. (2004) (2)
- Thimerosal Provision Repealed (2003) (2)
- Tired out: patients find few easy answers for cancer-related fatigue. (1998) (2)
- Thousands Fall Through HIV Treatment Gap (2004) (2)
- Scientific, political debate continues on methods for estimating fallout exposure. (2005) (2)
- Research unveils the 'who' and 'why' of gefitinib. (2004) (2)
- High dose rate brachytherapy and external beam: long-term results in cancer of the prostate (2003) (2)
- The Siren Song of Disease Eradication (2003) (2)
- Correction: Integrative Annotation of 21,037 Human Genes Validated by Full-Length cDNA Clones (2004) (2)
- Analysis of morphological characteristics of IDH-mutant/wildtype brain tumors using whole-lesion phenotype analysis (2021) (2)
- Soccer "sudden death" given new meaning. (2003) (2)
- Budget cuts put children's health study on chopping block (2006) (2)
- Claude Lenfant, MD (2003) (2)
- Tuft's report backs FDA fast-track, but post-marketing concerns loom (2006) (2)
- Monoclonals expand into neural disorders (2006) (2)
- Cause of Progeria's Premature Aging Found (2003) (2)
- The loss of a companion animal: social work services for bereaved pet owners: A retrospective case study in a veterinary teaching hospital (1983) (2)
- Slow Card Uptake (2004) (2)
- New bioethics council offers no recommendations. (2002) (2)
- Surgery for temporal lobe epilepsy is regaining favor. (2001) (2)
- Supplemental Information Understanding Tissue-Speci fi c Gene Regulation (2017) (2)
- lionessR: single-sample network reconstruction in R (2019) (2)
- Epigenetics is seen as possible key to cloning. (2001) (2)
- Nanotechnology grows into billion-dollar enterprise. (2004) (2)
- Therapeutic Implications of GIPC 1 Silencing in Cancer (2010) (2)
- Assembly work. (2008) (2)
- Resistance to Abstinence Only (2002) (2)
- Transcriptional landscape of cell lines and their tissues of origin (2016) (2)
- Disease detectives celebrate 50 years of successful sleuthing. (2001) (2)
- FDA Chastises Red Cross (2002) (2)
- Pain guidelines encourage vigilance. (2002) (2)
- Scientists concerned about future of atomic bomb survivors project. (2005) (2)
- Nongenic cancer-risk SNPs affect oncogenes, tumour-suppressor genes, and immune function (2018) (2)
- Gene regulatory network analysis identifies sex-linked differences in colon cancer drug metabolism processes (2018) (2)
- Veterans' Health Benefits (2003) (2)
- CDC says rates are up for gonorrhea, down for syphilis. (2001) (2)
- Attention turns to lung cancer in nonsmokers. (2006) (2)
- CDC Unveils SARS Plan (2003) (2)
- gpuZoo: Cost-effective estimation of gene regulatory networks using the Graphics Processing Unit (2021) (2)
- AAMC President Jordan J. Cohen, MD, Discusses Champion of Medical Education (2001) (2)
- Experts weigh prevention, therapy for ocular vaccinia in smallpox vaccinees. (2003) (2)
- FDA Tobacco Regulation (2004) (2)
- More Children on CNS Drugs (2002) (2)
- Rotor Wake Evolution and Vortex Wake Encounter Analysis Methods for Terminal Area Operations (2002) (2)
- Report on uninsured tries to reverse myths. (2001) (2)
- SINGLE CELL ANALYSIS, WHAT IS IN THE FUTURE? (2018) (2)
- Clustering on Sparse Data in Non-overlapping Feature Space with Applications to Cancer Subtyping (2018) (2)
- Cancer Death Rates Decline (2003) (2)
- Anthrax vs Flu Symptoms (2003) (2)
- Afghanistan aid workers struggle through threats. (2001) (2)
- New focus on research participant protection. (2002) (2)
- Protect Our Kids: a novel program bringing hemorrhage control to schools (2021) (2)
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- NIH Budget Doubled Since 1998 (2002) (1)
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- Talking heads, new bodies - millennium predictions for medicine. (2000) (1)
- Cell biology update: a decade of simulating space on earth. (2001) (1)
- Electromagnetic fields in homes carry leukaemia risk for children, WHO agency says. (2001) (1)
- Obesity and Breastfeeding (2003) (1)
- A brief history of the brief history of low-dose transplants. (2000) (1)
- Infectiousl obesity: Adenovirus fattens stem cells (2009) (1)
- Prediabetes Screening Urged (2002) (1)
- Medicare Wrangling Continues (2003) (1)
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- Teenage smoking continues to decrease. (2003) (1)
- Bioterrorism threat calls for revisiting research protections. (2002) (1)
- Device Manufacturer Fees (2002) (1)
- Molecular profiling predicts colon cancer survival better than dukes staging (2004) (1)
- Insure everyone now, urges IOM. (2004) (1)
- Smoke this: Parkinson's is rarer among tobacco users (2009) (1)
- Qualified health claim rulings leave little leeway for label language. (2006) (1)
- SARS attack: reality vs perception collide during students' Beijing visit. (2003) (1)
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- Consistency in drug response profiling (2016) (1)
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- Some promising biomarkers for cancer. (2000) (1)
- Simulation and Control Law Development for Autonomous UAV Artificial Icing Testing (2008) (1)
- Hong Kong flu still poses pandemic threat. (2002) (1)
- Seeding the world with stem cells. (2001) (1)
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- Quitting Smoking Harder for Women (2001) (1)
- Preventing type 1 diabetes may someday become possible. (2002) (1)
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- Connectivity of variants in eQTL networks dictates reproducibility and functionality (2019) (1)
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- Unproven treatments. (2008) (1)
- Brain fix: Stem cells supply missing enzyme (2009) (1)
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- Medicine on the Lewis and Clark Trail (2003) (1)
- AIDS abated: Genome scans illuminate immune control of HIV (2009) (1)
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- Thousands fall through HIV treatment gap: IOM wants new federal program. (2004) (1)
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- Surprise finding spurs Ebola researchers' hopes. (2002) (1)
- Anthrax Genomes Analyzed (2002) (1)
- Ancient ailment?: Early human may have carried tuberculosis (2009) (1)
- Hospitals get safety improvement task list. (2001) (1)
- KNOWLEDGE-DRIVEN ANALYSIS AND DATA INTEGRATION FOR HIGH-THROUGHPUT BIOLOGICAL DATA – Session Introduction (2007) (1)
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- Functional classi fi cation analysis of somatically mutated genes in human breast and colorectal cancers (2008) (1)
- Fear in the Amygdala (2002) (1)
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- Use of the Rat Gene Index to examine gene expression patterns from Src-transformed rat fibroblasts that exhibit broad differences in metastatic potential (1999) (1)
- Consistency in drug response profiling Reply (2016) (1)
- Hepatitis C Consensus (2002) (1)
- Clustering Sparse Data With Feature Correlation With Application to Discover Subtypes in Cancer (2020) (1)
- Public Misled About Post-9/11 Air Quality (2003) (1)
- Supplement Enforcement Tightened (2003) (1)
- "Cipromania" and "superclean" homes are now increasing antibiotic resistance. (2002) (1)
- Abstract B1-20: Gene regulation by transcription factors and microRNAs in ovarian cancer (2015) (1)
- Molecular fingerprints and mechanisms of chemoresistance in ovarian cancer (2008) (1)
- A Case of Multiple Pagetoid Spitz Nevi (2017) (1)
- NCI to lead palliative care improvements. (2001) (1)
- Battlefield uranium doubts linger for troops. (2003) (1)
- current concepts Microarray Analysis and Tumor Classification (2006) (1)
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- Alfimeprase to succeed Genentech's alteplase? (2006) (1)
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- Divergent And Convergent Gene Expression Patterns In Well Phenotyped Patients With COPD And IPF (2011) (1)
- Data, Analysis, and Standardization (2009) (1)
- Safikhani et al. reply (2016) (1)
- Phenotype-driven transitions in regulatory network structure (2017) (1)
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- Guide for Treating Obese Patients (2001) (1)
- Accelerating genomic data publishing and sharing (2013) (1)
- DNA Microarray Technology and Applications — An Overview (2008) (1)
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- Genome-Wide Aberrant Splicing in Patients with Acute Myeloid Leukemia (AML) Indetifies Potential Novel Targets (2011) (1)
- Sixth International Workshop on Human Chromosome 21 Mapping 1996, New York, May 6-8 1996: Report (1997) (1)
- Resources and Opportunities Rice Bioinformatics . Analysis of Rice Sequence Data and Leveraging the Data to Other Plant Species 1 (2001) (1)
- A microRNA activity map of human mesenchymal tumors: connections to oncogenic pathways; an integrative transcriptomic study (2012) (1)
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- RECONSTRUCTION AND ANALYSIS OF EXPRESSED GENE SEQUENCES (2003) (1)
- Using shRNA experiments to validate gene regulatory networks (2015) (1)
- NAS Recommends Creating Homeland Security Institute (2002) (1)
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- Environmental Influences Measured by Epigenetic Clock and Vulnerability Components at Birth Impact Clinical ASD Heterogeneity (2021) (1)
- Federal ruling requires million-year guarantee of safety at Yucca Mountain nuclear waste site. (2004) (1)
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- Big data in health care and biomedical research (2015) (1)
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- Network-based Distance Metric with Application to Discover Disease Subtypes in Cancer (2017) (1)
- Blindness Increasing in Aging (2002) (1)
- Agencies prepare worst-case flu vaccine. (2004) (1)
- 2 Gene expression in mouse models for multiple sclerosis, Alzheimer's disease and stroke (2013) (1)
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- Medicine on the Lewis and Clark Trail: exhibit explores expedition's medical adventures. (2003) (1)
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- Frontiers in science. How did life on Earth get started? (2008) (1)
- Omics and Prognostic Markers (2010) (1)
- Variance due to Smooth Bias in Rat Liver and Kidney Baseline Gene Expression in a Large Multi‐laboratory Data Set (2009) (1)
- HIV Vaccine Study Nixed (2002) (1)
- FDA reviews expanded claims on health benefits of certain foods. (2004) (1)
- Spectral clustering in regression-based biological networks (2019) (1)
- From Blood Cells to Neurons (2003) (1)
- Maternal HIV and Children's Hearts (2002) (1)
- NIH: plan to speed biomedical payoffs. (2003) (1)
- Biologically informed NeuralODEs for genome-wide regulatory dynamics. (2023) (0)
- Steven Mufson, Brian Vastag, and The Washington Post Graphics Staff Receive 2012 David Perlman Award for Excellence in Science Journalism–News: Response (2013) (0)
- NIH Panel Examines Conflicts (2004) (0)
- Universal Coverage Redux (2003) (0)
- Senate Considers VA Request (2003) (0)
- Bad news, good news: ADHD‐risk gene has silver lining (2009) (0)
- Critics Oppose VA Closings (2003) (0)
- Cancer Cells in Sheep's Clothing (2001) (0)
- Cats Trigger Asthma Only Sometimes (2001) (0)
- Radiation Compensation Rules (2002) (0)
- Brundtland continues WHO come-back campaign (1998) (0)
- Autoimmune Disorders and Hormones (2001) (0)
- Grants for Childhood Trauma (2002) (0)
- Risky flames: Firefighter coronaries spike during blazes (2009) (0)
- Brain Disorders: International Ills (2001) (0)
- Asthma zap: Heated scope reduces attacks (2009) (0)
- States' health care budgets faltering. (2004) (0)
- Tinker with our genetic future? Not yet, say experts. (2000) (0)
- Outpatient PID Treatment Works (2002) (0)
- Global Health Web Site (2001) (0)
- Project Bioshield Moves Ahead (2003) (0)
- Easing Foreign Brain Drain (2002) (0)
- Screen for Chlamydia (2001) (0)
- Medicare Reform Signed (2004) (0)
- Easing Cocaine Withdrawal (2001) (0)
- Drug Reimportation Curbed (2003) (0)
- Eosinophils and Food Allergy (2001) (0)
- Drug Discount Cards (2004) (0)
- Garlic and HIV Medication (2002) (0)
- NIH Stem Cell Registry Online (2001) (0)
- Universal Health Coverage (2004) (0)
- Hospital Quality Program (2003) (0)
- Neonatal Lung Treatment Risk (2001) (0)
- Staph Gene Swappers (2001) (0)
- How to slice it? Tissue technologies vie for potentially lucrative market. (1998) (0)
- More Stringent Rules on Accutane (2002) (0)
- Medical Error Bill (2003) (0)
- Medicare Rates Still Uncertain (2002) (0)
- IOM public health report urges massive change. (2002) (0)
- Judges Ban Abortion Ban (2003) (0)
- Fertility Treatment Statistics (2001) (0)
- Viruses Arm Bacteria (2002) (0)
- Medicare Fix on the Way (2003) (0)
- Clinical trials to receive a boost, but how big? (2001) (0)
- Baby Teeth Stem Cells (2003) (0)
- Days, weeks, or months: when to say how long? (1998) (0)
- Arthritis puzzle: two pieces snap into place. (2002) (0)
- Dietary Supplement Framework (2002) (0)
- Visa Restrictions Rejected (2003) (0)
- Pooling Federal Health Care (2002) (0)
- Less is more (bone): Yearly osteoporosis drug reduces fractures (2009) (0)
- Nora Volkow, MD (2003) (0)
- H&HN--eight decades of health care: 80th anniversary. CIOs input key to creating seamless infrastructures. (2007) (0)
- Drug‐resistant flu detected: Japanese strains appear transmissible (2009) (0)
- How low can the doses go? Transplanters look to less toxic future. (2000) (0)
- Waking up: Brain stimulator spurs dramatic improvement years after injury (2009) (0)
- Defense retirees receive better coverage. (2001) (0)
- Health Insurance in Households (2002) (0)
- Aircraft Air Quality Concern (2002) (0)
- Informatics Careers Take Shape in Translational and Clinical Research (2010) (0)
- WebM&M Launched (2003) (0)
- Beware the starlings: Common birds can carry avian influenza (2009) (0)
- Early arrival: HIV came from Haiti to United States (2009) (0)
- PHS Provides Immunoglobulin (2002) (0)
- Bone Density Predicts Breast Cancer (2001) (0)
- No-Discount Cards? (2004) (0)
- States Combat AHPs (2003) (0)
- Employers and Insurance Quality (2001) (0)
- NIH Budget Stalls (2003) (0)
- Industry warily eyes new Medicare drug plan (2006) (0)
- Bush Announces Tax Credits (2004) (0)
- Colossal colon cruises country. (2003) (0)
- NJ insurers agree to pay for trials. (2000) (0)
- Commission Wants Studies of ART Health Effects (2003) (0)
- Rebirth of Prescription Drug Plan (2002) (0)
- Human embryos cloned for stem cells: work not seen as leap toward reproductive cloning. (2004) (0)
- Near-final word on adjuvant chemotherapy for breast cancer is good news. (2005) (0)
- Proteomics for Prostates (2002) (0)
- Dueling Cloning Bills Return (2003) (0)
- Arsenic Inhibits Telomerase (2001) (0)
- Abortion Ban Trial (2004) (0)
- Brain gain: Constant sprouting of neurons attracts scientists, drugmakers (2009) (0)
- Asbestos Fund Challenged (2003) (0)
- HMOs report quality improvements. (2001) (0)
- Late-Term Abortion Ban (2003) (0)
- Kay Redfield Jamison, PhD (2003) (0)
- Light on Fetal Brains (2002) (0)
- High-profile cancer cases prompt awareness efforts. (1999) (0)
- New HELP Chair (2003) (0)
- Physicians Influence Fitness (2001) (0)
- Advertising campaign puts face on prostate cancer. (2006) (0)
- DU Cleanup Bill Introduced (2003) (0)
- Sweeping new congressional plan to fight cancer is previewed. (2002) (0)
- HHS Inspector General to Go (2003) (0)
- Medicare tries to get it right (2004) (0)
- Flawed stem cells yield fragile X clues: Researchers study genetic disorder via discarded embryos (2009) (0)
- Suburbs Are Healthiest (2001) (0)
- Rebuke on SCHIP Waivers (2004) (0)
- FDA Clinical Trial Investigated (2003) (0)
- Gene Therapy for Alcoholism (2001) (0)
- New initiatives highlight world AIDS day. (2003) (0)
- Not yet: CDC panel questions antidepressant gene test (2009) (0)
- Top Researchers Reassure Senate on SARS Threat (2003) (0)
- Report: Restructure NIH (2003) (0)
- Tenacious STD: Drug-resistant gonorrhea is spreading (2009) (0)
- Herbal Remedies Studied (2002) (0)
- Abortion Opponents Win Seats (2002) (0)
- New FDA Commissioner (2002) (0)
- Mixed moniker: 'mini' marrow transplants fuel excitement, concern. (2000) (0)
- First Lady of Hungary Tours NIH (1998) (0)
- UN touts world health success stories. (2001) (0)
- NCI Head Resigns (2001) (0)
- Children's Health Improvement (2001) (0)
- John Quackenbush Talks About the Clinical Promise of Genetic Microarrays (2003) (0)
- The venter decryption: Biologist decodes his own genome (2009) (0)
- 60 Million for Healthy Eating (2004) (0)
- And Supports Liability Reform (2003) (0)
- Psychologist Bridges Clinic and Lab to Untangle Schizophrenia's Roots (2010) (0)
- Genes and Uterine Fibroids (2002) (0)
- Programs Aim to Train Translational Scientists (2008) (0)
- Panel Report on GI Procedure (2002) (0)
- Blame it on the B cells (2010) (0)
- Pain in the Brain (2003) (0)
- Malpractice Limits Uncertain (2003) (0)
- No slippery slope: Physician-aided deaths are rare among those presumed vulnerable (2009) (0)
- Effort launched to study stem cell lines, train researchers how to nurture them. (2003) (0)
- US marijuana laws clamping the lid on pot research (2006) (0)
- Guilt by association: Whole‐genome scans yield disease clues (2009) (0)
- Emergency Medical Treatment (2003) (0)
- Grim reap purr: Nursing home feline senses the end (2009) (0)
- Price Blame Game (2004) (0)
- Expanded Cancer Trials Access (2002) (0)
- Chlamydia Toxin and Chronic Illness (2001) (0)
- Dispute Over Teenage Drinking (2002) (0)
- Multiple Sclerosis Report Released by IOM (2001) (0)
- African AIDS Funding (2004) (0)
- X‐Ray kin: Radiation risk is hereditary (2009) (0)
- Addiction alleviator?: Hallucinogen's popularity grows (2009) (0)
- The long road to beta cells: Quest for type 1 diabetes cure inches forward (2009) (0)
- Smart Bomb for Leukemia (2001) (0)
- Gulf War syndrome not due to wartime stress or psychiatric illness (2004) (0)
- Temporary Artificial Lung (2001) (0)
- SARS Chip Arrives (2003) (0)
- Carbon-capture scheme could cause toxic blooms (2010) (0)
- Organ Registries Still Limited (2002) (0)
- Wrong way: HIV vaccine hinders immunity in mice (2009) (0)
- Finasteride Can Reduce Prostate Cancer Risk (2003) (0)
- Deciphering DNA's Words (2003) (0)
- GAO: Medicare ads were illegal. (2004) (0)
- Generics Get Boost (2003) (0)
- Kay Redfield Jamison, PhD: from an unquiet mind to rational exuberance. (2003) (0)
- Samuel Broder, MD, Reflects on the 30th Anniversary of the National Cancer Act (2001) (0)
- Warfarin = Aspirin for Stroke (2001) (0)
- PTSD and Depression in NYC (2002) (0)
- Possible IVF–Birth Defect Link (2002) (0)
- Northwest passage: Americas populated via Alaska, genetics show (2009) (0)
- DHHS Responds to Attacks (2001) (0)
- P53 for Parkinson Disease (2002) (0)
- NAS recommends creating Homeland Security Institute. National Academy of Sciences. (2002) (0)
- Boomers Don't Raise Potheads (2001) (0)
- Anatomy exhibit shows charm of grotesque. (2002) (0)
- But Lack of Standardized Extracts Foils Clinical Studies (2002) (0)
- The next transplant frontier: treating solid tumors. (2000) (0)
- Accreditation for Clinical Trials (2001) (0)
- Sickle save: Skin cells fix anemia in mice (2009) (0)
- Lack of evidence: Vaccine additive not linked to developmental problems (2009) (0)
- Smallpox Vaccination Compensation in Place (2003) (0)
- The beneficial side of prions (2009) (0)
- Virus spreads by bouncing off infected cells (2010) (0)
- Frontiers in science. Will we soon find life in the heavens? (2008) (0)
- Medicare Campaign Probed (2004) (0)
- Project BioShield on Track (2003) (0)
- Uninsured Tax Breaks (2002) (0)
- NIH Student Loan Program (2003) (0)
- A Matter of Policy (2008) (0)
- NCI extends clinical trials to community oncologists (2004) (0)
- Debate renewed: Diabetes drug ups heart risk (2009) (0)
- New Misconduct Rules (2004) (0)
- Barely alive: Ancient bacteria survive in the slow lane (2009) (0)
- Moving up the charts: Drug-resistant bug invades military, civilian hospitals (2009) (0)
- Medical Illustrations on Display (2003) (0)
- Patient care. A new way of treating today's wounded soldiers. (2007) (0)
- TB picture brightening, but dark spots remain. (2002) (0)
- Medicare Cuts Not Reversed (2003) (0)
- Encouraging Young Nurses (2002) (0)
- Defibrillators Add to Life (2002) (0)
- Reservist Health Benefits (2003) (0)
- Stump, Phantom Pain Differ (2001) (0)
- Gum Overgrowth Mutation (2002) (0)
- Best Acne Treatment Elusive (2001) (0)
- Top Advisors Leave DHHS (2003) (0)
- Grants for Terrorist Attack Ills (2001) (0)
- Asthma Safety Study Stopped (2003) (0)
- Twins Sought for Study of Autoimmune Diseases (2003) (0)
- Trif Triggers Inflammation (2003) (0)
- Medicare Law Investigated (2004) (0)
- Stem Cell Pressure (2004) (0)
- Herb for Minor Depression (2003) (0)
- Bug versus bug: Insect virus makes a viable flu vaccine (2009) (0)
- FDA Cannot Ensure Overseas Protections (2001) (0)
- Erratum: Alfimeprase to succeed Genentech's alteplase? (2006) (0)
- Long-term Care Shortage (2003) (0)
- 100 Million More for Smallpox Vaccinations (2003) (0)
- Grants Made to Treat Adolescent Substance Abuse (2002) (0)
- Stents stumble: Enthusiasm wanes for drug-coated artery tubes (2009) (0)
- Uninsured Worker Rate Rises (2002) (0)
- 846 Million for AIDS Care (2001) (0)
- Diabetes from depression: Older adults face dual risk (2009) (0)
- Low-Birth Weight Equals Higher Health Risks (2003) (0)
- Memory-Blocking Protein (2001) (0)
- Federal Patient Safety Task Force (2001) (0)
- Genome.gov Launched (2002) (0)
- Bold Health Care Initiatives Needed, Says New Report (2002) (0)
- Bush Touts Medicare Plan . . . (2003) (0)
- Nora Volkow, MD: NIDA's new leader: from rejection to direction. (2003) (0)
- Proposal for State Medicaid Autonomy Under Fire (2003) (0)
- Surveillance of New Cigarettes (2001) (0)
- Million-year standard set for nuclear waste facility. (2005) (0)
- FDA to Speed Generics (2003) (0)
- Payment. M+C redux? (2006) (0)
- VA Mismanagement Found (2003) (0)
- Telemedicine's adolescent angst. (2007) (0)
- Measurement and Analysis of High Advance Ratio Helicopter Rotor Performance (2008) (0)
- UAV Flight Control for Artificial Icing Testing (2009) (0)
- A New Main Rotor for the Sikorsky S-61 (2002) (0)
- Constructing gene regulatory networks using epigenetic data (2021) (0)
- Java suite for gene expression data mining (2000) (0)
- BIOINFORMATICS nEASE: a method for gene ontology subclassification of high-throughput gene expression data (2012) (0)
- Department of Pathology, Thomas Jefferson University, Identification of conserved gene expression features between murine mammary carcinoma models and human breast tumors (2020) (0)
- Using Gene Regulatory Networks to Understand Sex Differences in Lung Cancer Gene Regulation (2023) (0)
- The Network Zoo: a multilingual package for the inference and analysis of biological networks (2022) (0)
- Using networks to understand the genotype-phenotype connection (2017) (0)
- Abstract IA11: Extracting predictive networks from high-dimensional data. (2012) (0)
- lionessR: single sample network inference in R (2019) (0)
- Proceedings of the fifth international Molecular Pathological Epidemiology (MPE) meeting (2019) (0)
- Give cancer archival tissues a new life: Unlock with high-throughput technologies (2011) (0)
- SpaCeNet: Spatial Cellular Networks from omics data (2022) (0)
- Multi-omic regulatory networks capture downstream effects of kinase inhibition in Mycobacterium tuberculosis (2021) (0)
- Using Networks to Discover Biology in Complex Systems (2016) (0)
- The Network Zoo: a multilingual package for the inference and analysis of gene regulatory networks (2023) (0)
- Biomarker correlation network in colorectal carcinoma by tumor anatomic location (2017) (0)
- Counting Genes: A Human Genome Conundrum (2022) (0)
- Data-driven validation of gene regulatory networks using knock-down data (2013) (0)
- Investigating cancer risk germline mutations using eQTL networks (2018) (0)
- Biologically informed NeuralODEs for genome-wide regulatory dynamics (2023) (0)
- Large Scale Expression Profiling and Functional Annotation of Adipocyte Differentiation (2004) (0)
- SP 130 Driving discovery through data integration and analysis (2011) (0)
- L8.3 Moving Beyond the Mean: The Role of Variation in Determining Phenotype (2012) (0)
- Estimating gene regulatory networks with pandaR you. (2017) (0)
- Looking back at the first twenty years of genomics (2022) (0)
- Aging and Apoptosis Genes Lose Outgoing Regulatory Network Connections in COPD (2020) (0)
- Breadth-first Search Based Approach to Enumerating Chemical Compounds Containing Outerplanar Fused Benzene Ring Substructures (2015) (0)
- Abstract 2135: Genetic relationships between ovarian and breast cancers (2010) (0)
- Poly-ligand profiling differentiates trastuzumab-treated breast cancer patients according to their outcomes (2018) (0)
- Comprehensive Genomic Profiling Of The Lung Transcriptome In Emphysema And IPF Using RNA-Seq (2012) (0)
- Abstract 1867: The natural product sulforaphane protects epidermal tissue from individuals at increased risk for melanoma from the effects of UV radiation (2011) (0)
- 2 Effect of ecto-5 ’-nucleotidase inhibition on the invasive phenotype of the murine B 16 F 10 melanoma cell line (2011) (0)
- MicroRNA-mRNA networks define translatable molecular outcome phenotypes in osteosarcoma (2020) (0)
- MeV: Software for Next Generation Genomic Data Analysis (2014) (0)
- MRNA And MicroRNA Expression Profiles Indicate Disease Severity In Patients With Idiopathic Pulmonary Fibrosis (2011) (0)
- Appareils pour le traitement des troubles de la colonne vertebrale (2001) (0)
- Procédés et appareil de distribution et de positionnement de matières de type feuille en chirurgie (2012) (0)
- Analysis of Array Data and Clinical Validation of Array-Based Assays (2012) (0)
- Emphysema Gene Expression Signatures (2011) (0)
- Smoking Related Co-Methylation Networks Reveal Checkpoint-Related Signatures of IPF and COPD in Leukocytes and Lung Tissue (2020) (0)
- Sonic hedgehog promotes CD4+ T lymphocyte proliferation by modulating a subset of CD28-targeted genes (2005) (0)
- PAX8 and lineage dependence in high grade serous ovarian cancer (2015) (0)
- Moving beyond gene expression: identification of lung-disease-associated novel transcripts and alternative splicing by RNA sequencing (2012) (0)
- Genome-Wide Analysis Of Somatic Genetic Alterations In Severe Lung Disease (2011) (0)
- Data will Drive the Healthcare Revolution (2020) (0)
- BRCA1 and RNAi factors promote small RNA- and PalB2/Rad52-mediated repair (2021) (0)
- John Quackenbush talks about the clinical promise of genetic microarrays. Interviewed by Brian Vastag. (2003) (0)
- Characterizing The Lung Disease Transcriptome With Next Generation Rna-Sequencing (2011) (0)
- The Expression Of Long Intergenic Noncoding RNAs In Idiopathic Pulmonary Fibrosis And Their Possible Role As Suppressors Of Proliferation (2012) (0)
- Elevated PTX3 Expression Is Specific For Emphysema Severity In Lung Tissue And Plasma Of Patients With COPD (2012) (0)
- Proceedings of the fifth international Molecular Pathological Epidemiology (MPE) meeting (2022) (0)
- Human Cancer Biology Identification of Novel Kinase Targets for the Treatment of Estrogen Receptor – Negative Breast Cancer (2009) (0)
- Abstract 3269: QTLs in breast tumor and breast normal adjacent FFPE specimens from the Nurses’ Health Study (2014) (0)
- Search for anti-proton decay at the Fermilab anti-proton accumulator: Proposal (1992) (0)
- Marqueurs d'emplacement anatomique et méthodes d'utilisation dans le positionnement de matières de type feuille pendant une opération (2012) (0)
- 8. Transcriptomics and Network Medicine (2017) (0)
- Abstract 4612: Genetic variants in epigenetic pathways and risk of multiple cancer types in the GAME-ON consortium (2015) (0)
- Identifying Novel Transcripts And Alternative Splicing Associated With The ILD And COPD Lung Transcriptome Using MRNA-Seq (2011) (0)
- Supplementary Material 18 (2014) (0)
- Cancer subtype identification using somatic mutation data (2018) (0)
- Microrna Expression Profiles In Emphysema (2011) (0)
- CXCR4 pathway associated with family history of melanoma (2013) (0)
- Canonical NF- (cid:1) B Activation Is Essential for Epstein-Barr Virus Latent Membrane Protein 1 TES2/CTAR2 Gene Regulation (cid:1) † (2011) (0)
- Personal report: Richard Mural (2014) (0)
- Somatic Mutations In The Lungs Of Patients With Idiopathic Pulmonary Fibrosis (2011) (0)
- Analysis of BRCA1-related functional associations in sporadic triple negative breast cancer: A network-based approach. (2016) (0)
- TRANSCRIPTOME 2000 : From Functional Genomics to Systems Biology (2018) (0)
- The Human Genome (2011) (0)
- Supplementary Material 12 (2015) (0)
- Genome-Wide Transcriptional Analysis of Human Left and Right Internal Mammary Arteries and their use in Coronary Artery Bypass Grafting (2014) (0)
- Gene expression in mousemodels for multiple sclerosis , Alzheimer ' s disease and stroke (2013) (0)
- Abstract P2-09-09: Polyligand profiling differentiates cancer patients according to their benefit of treatment (2018) (0)
- A Mouse Model for Immunotherapeutic Reversal of Leukemia-Induced T Cell Dysfunction (2008) (0)
- Regulatory network changes between cell lines and their tissues of origin (2017) (0)
- Haploinsufficiency of Hedgehog interacting protein causes increased emphysema induced by cigarette smoke through network rewiring (2015) (0)
- Microarray analysis of the chondrocytic cell line T/C-28a2 under dynamic fluid shear (2002) (0)
- DYNAMIC GENE REGULATION BY HYPOXIA: THE EFFECTS OF INTERMITTENT HYPOXIA ON MACROPHAGE GENE EXPRESSION: 240 (2004) (0)
- Nébuliseur nasal pour transporter et stocker des fluides (2013) (0)
- AdipoChip: Focused Murine cDNA Microarray (2002) (0)
- Abstract 1593: Sulforaphane protects melanocytes and skin from individuals at increased risk for melanoma from the effects of UV radiation: Role of thioredoxin reductase 1. (2012) (0)
- Proceedings of the third international molecular pathological epidemiology (MPE) meeting (2017) (0)
- EXPRESSION PROFILING IDENTIFIES OSTEOPONTIN AS LEADING CANDIDATE TUMOR PROGRESSION MARKER USING POOLED HUMAN COLON CANCER SPECIMENS (2002) (0)
- , Protein 1 TES 2 / CTAR 2 Gene Regulation Epstein-Barr Virus Latent Membrane B Activation Is Essential for κ (2011) (0)
- Artificial intelligence in radiology (2018) (0)
- Unsupervised Combination Of Clinical And Gene Expression Data Elucidates Intermediate Phenotypes In Ild And COPD (2011) (0)
- Transcriptome 2002 Conference (2002) (0)
- 569 Whole-genome sequencing and analysis of an ovarian cancer patient (2010) (0)
- Comprehensive Profiling of the Lung Transcriptome in Emphysema and IPF Using RNA-SEQ (2012) (0)
- Assessment of pharmacogenomic agreement [version 1; peer review: 3 approved] (2022) (0)
- Package 'kohonen' Title Supervised and Unsupervised Self-organising Maps (2011) (0)
- Tissue-aware RNA-Seq processing and normalization for heterogeneous and sparse data (2017) (0)
- Supplementary Material 16 (2012) (0)
- Exploring and Mapping the Life Cycle of Precision Medicine Data (2016) (0)
- 93: A Panel of Potential Diagnostic Biomarkers for Chronic Prostatitis/Chronic Pelvic Pain Syndrome (2007) (0)
- Abstract B8: Why is there no consensus on GBM subgroups? Understanding the nature of biological and statistical variability in The Cancer Genome Atlas GBM data and the implications for molecular tumor classification (2010) (0)
- AGenome-WideAberrantRNASplicing inPatientswithAcute MyeloidLeukemia IdentifiesNovelPotentialDiseaseMarkers and Therapeutic Targets (2014) (0)
- Consistency in large pharmacogenomic studies Reply (2016) (0)
- Package 'rheumaticconditionwollbold' (0)
- cDNA Libraries and Construction of a Gene Index for Cattle Sequence Evaluation of Four Pooled-Tissue Normalized Bovine (2001) (0)
- Abstract 4941: A microRNA activity map of human mesenchymal tumors: An integrative transcriptomic study (2012) (0)
- perturbation in mice for cholesterol metabolism during dietary folate Gene-environment interactions reveal a homeostatic role (2007) (0)
- Blood gene expression risk profiles and interstitial lung abnormalities: COPDGene and ECLIPSE cohort studies (2022) (0)
- Proceedings Twelfth International Conference on Intelligent Systems for Molecular Biology/Third European Conference on Computional Biology 2004 (ISMB/ECCB 2004) (2004) (0)
- Procédés et appareil pour la distribution et le positionnement de matériaux en feuille (2012) (0)
- Sequencing PCR Products (1999) (0)
- Divergent Lung Tissue Methylation Signatures of COPD and Pulmonary Fibrosis (2023) (0)
- Gene Expression Risk Profiles and Interstitial Lung Abnormalities (2022) (0)
- Assessment of pharmacogenomic agreement Please share how this access benefits you. Your story matters (2016) (0)
- MicroRNA paraffin-based studies in osteosarcoma reveal reproducible independent prognostic profiles at 14q32 (2013) (0)
- The TIGR Plant Gene Indices (1999) (0)
- Source Software for the Analysis of Microarray Data (0)
- Microsoft Word-JBC_revision20 (2003) (0)
- Abstract 4922:KRASandBRAFmutations influence correlation structure of locus-specific CpG island methylation and CIMP in colorectal cancer (2010) (0)
- Stochasticity and Networks in Genomic Data. (2007) (0)
- Identification of genes involved in colon cancer metastasis using cDNA microarrays (1999) (0)
- Network Medicine Approaches Reveal Sex-biased Regulation of Extracellular Matrix Pathway in COPD (2023) (0)
- Hypomethylation Of LINE-1 Repeats Is A Predictor Of Carcinogenic Transformation In Normal Histology Lung Tissue (2012) (0)
- A network model for angiogenesis in ovarian cancer (2015) (0)
- An Integrated Program in Microbial Genome Sequencing and Analysis (2005) (0)
- Ensemble genomic analysis in human lung tissue identifies novel genes for chronic obstructive pulmonary disease (2018) (0)
- Multiple-Input Multiple-Output Causal Strategies for Gene Selection you. (2012) (0)
- Diet‐induced Weight Loss Changes in Gene Regulatory Networks in the Rectum: Network Analysis as a Compliment to Traditional Gene Expression Analysis (2015) (0)
- IEEE 7th BIBE Invited Plenary Keynote: Stochasticity and Networks in Genomic Data (2007) (0)
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Other Resources About John Quackenbush
What Schools Are Affiliated With John Quackenbush?
John Quackenbush is affiliated with the following schools:
- George Washington University
- California Institute of Technology
- University of Alberta
- University of California, Los Angeles
- Baylor College of Medicine
- Duke University
- Université libre de Bruxelles
- Aarhus University
- Purdue University
- University of North Carolina at Chapel Hill
- University of Georgia
- Virginia Tech
- University of Utah
- Harvard University