Jose V. Lopez
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Jose V. Lopezcomputer-science Degrees
Computer Science
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Machine Learning
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Artificial Intelligence
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Computer Science
Jose V. Lopez's Degrees
- PhD Computer Science Stanford University
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Why Is Jose V. Lopez Influential?
(Suggest an Edit or Addition)According to Wikipedia, Jose V. Lopez is an American-Filipino Molecular Biologist. He has been a faculty and Professor of Biology at Nova Southeastern University . in Dania Beach, Florida since 2007. Lopez has contributed as co-founder of the Global Invertebrate Genomics Alliance , a community of scientists. He has also participated in the "Porifera - Tree of Life", "Earth Microbiome" and Earth Bio-genome Projects.
Jose V. Lopez's Published Works
Number of citations in a given year to any of this author's works
Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- Numt, a recent transfer and tandem amplification of mitochondrial DNA to the nuclear genome of the domestic cat (1994) (515)
- Complete nucleotide sequences of the domestic cat (Felis catus) mitochondrial genome and a transposed mtDNA tandem repeat (Numt) in the nuclear genome. (1996) (256)
- Rates of nuclear and cytoplasmic mitochondrial DNA sequence divergence in mammals. (1997) (164)
- A molecular systematic survey of cultured microbial associates of deep-water marine invertebrates. (2005) (126)
- Reconstruction of Family-Level Phylogenetic Relationships within Demospongiae (Porifera) Using Nuclear Encoded Housekeeping Genes (2013) (117)
- Gut microbiome diversity is associated with sleep physiology in humans (2019) (115)
- Polyketide Synthase Genes from Marine Dinoflagellates (2003) (104)
- Co-Cultures of Pseudomonas aeruginosa and Roseobacter denitrificans Reveal Shifts in Gene Expression Levels Compared to Solo Cultures (2012) (102)
- Molecular determination of species boundaries in corals: genetic analysis of the Montastraea annularis complex using amplified fragment length polymorphisms and a microsatellite marker. (1999) (98)
- Pyrosequencing of Bacterial Symbionts within Axinella corrugata Sponges: Diversity and Seasonal Variability (2012) (95)
- Rapid evolution of a heteroplasmic repetitive sequence in the mitochondrial DNA control region of carnivores (1994) (83)
- Molecular phylogeny of mitochondrial cytochrome b and 12S rRNA sequences in the Felidae: ocelot and domestic cat lineages. (1996) (72)
- Metabolites from the marine-derived fungus Chromocleista sp. isolated from a deep-water sediment sample collected in the Gulf of Mexico. (2006) (67)
- Localization of polyketide synthase encoding genes to the toxic dinoflagellate Karenia brevis. (2005) (66)
- The Global Invertebrate Genomics Alliance (GIGA): Developing community resources to study diverse invertebrate genomes (2014) (64)
- Dynamics of marine bacterial community diversity of the coastal waters of the reefs, inlets, and wastewater outfalls of southeast Florida (2015) (61)
- The Earth BioGenome Project 2020: Starting the clock (2022) (58)
- The human microbiome: an emerging tool in forensics (2017) (55)
- Population structure and dispersal of the coral‐excavating sponge Cliona delitrix (2015) (49)
- Characterization of genetic markers for in vitro cell line identification of the marine sponge Axinella corrugata. (2002) (48)
- Vibrio caribbeanicus sp. nov., isolated from the marine sponge Scleritoderma cyanea. (2012) (44)
- Fish-T1K (Transcriptomes of 1,000 Fishes) Project: large-scale transcriptome data for fish evolution studies (2016) (44)
- Cooperation and competition shape ecological resistance during periodic spatial disturbance of engineered bacteria (2017) (37)
- Naturally mosaic operons for secondary metabolite biosynthesis: variability and putative horizontal transfer of discrete catalytic domains of the epothilone polyketide synthase locus (2003) (35)
- Two distinct microbial communities revealed in the sponge Cinachyrella (2014) (34)
- Evolution of group I introns in Porifera: new evidence for intron mobility and implications for DNA barcoding (2017) (33)
- Molecular Techniques Reveal Wide Phyletic Diversity of Heterotrophic Microbes Associated with Discodermia spp. (Porifera: Demospongiae) (1999) (33)
- Bleaching events regulate shifts from corals to excavating sponges in algae‐dominated reefs (2018) (32)
- Use of Real-Time qPCR to Quantify Members of the Unculturable Heterotrophic Bacterial Community in a Deep Sea Marine Sponge, Vetulina sp (2008) (30)
- Is there a link between aging and microbiome diversity in exceptional mammalian longevity? (2018) (30)
- Patterns of population structure for inshore bottlenose dolphins along the eastern United States. (2013) (29)
- Population dynamics of Vibrio spp. associated with marine sponge microcosms (2010) (29)
- Discrimination of Species in the Montastrea annularis Complex using Multiple Genetic Loci (1997) (29)
- Ongoing Transposon-Mediated Genome Reduction in the Luminous Bacterial Symbionts of Deep-Sea Ceratioid Anglerfishes (2018) (27)
- Why sequence all eukaryotes? (2022) (25)
- Florida reef sponges harbor coral disease-associated microbes (2010) (24)
- Host population genetics and biogeography structure the microbiome of the sponge Cliona delitrix (2020) (23)
- Diverse Bacterial PKS Sequences Derived From Okadaic Acid-Producing Dinoflagellates (2008) (21)
- Synthesis of (−)-ugandensidial (1990) (21)
- HBMMD: an enhanced database of the microorganisms associated with deeper water marine invertebrates (2004) (19)
- Seasonal Variation of Essential Oil Yield and Composition of Thyme (Thymus vulgaris L.) Grown in Castilla—La Mancha (Central Spain) (2009) (19)
- Asynchronous reproduction and multi-spawning in the coral-excavating sponge Cliona delitrix (2015) (19)
- Diverse deep-sea anglerfishes share a genetically reduced luminous symbiont that is acquired from the environment (2019) (19)
- Isoflavans and a stilbene from wood of the decay-resistant tropical tree Diphysa robinioides (1986) (19)
- Advancing genomics through the Global Invertebrate Genomics Alliance (GIGA) (2017) (19)
- New aporphine alkaloids from Phoebe valeriana (1986) (19)
- Depth-Dependent Environmental Drivers of Microbial Plankton Community Structure in the Northern Gulf of Mexico (2019) (17)
- Inevitable future: space colonization beyond Earth with microbes first (2019) (16)
- Standards recommendations for the Earth BioGenome Project (2022) (16)
- Culture‐independent Characterization of the Microbiome of Healthy Pulp (2018) (16)
- Detecting personal microbiota signatures at artificial crime scenes. (2020) (15)
- Multiple Facets of Marine Invertebrate Conservation Genomics. (2019) (14)
- Combined eDNA and Acoustic Analysis Reflects Diel Vertical Migration of Mixed Consortia in the Gulf of Mexico (2020) (14)
- Using probabilities of enterococci exceedance and logistic regression to evaluate long term weekly beach monitoring data. (2016) (13)
- A Multidisciplinary Approach to Investigate Deep-Pelagic Ecosystem Dynamics in the Gulf of Mexico Following Deepwater Horizon (2020) (13)
- Characterization of the microbiome and bioluminescent symbionts across life stages of Ceratioid Anglerfishes of the Gulf of Mexico (2019) (11)
- Microbiome Analyses Demonstrate Specific Communities Within Five Shark Species (2021) (10)
- Comparison of Bacterial Diversity within the Coral Reef Sponge, Axinella corrugata, and the Encrusting Coral Erythropodium caribaeorum (2008) (8)
- In Vitro Production of Marine-Derived Antitumor Compounds (1998) (7)
- A MOLECULAR SYSTEMATIC SURVEY OF SPONGE-DERIVED MARINE MICROBES (2004) (7)
- Scleractinian Coral Recruitment to Reefs Physically Damaged by Ship Groundings (2008) (6)
- Microbial community shift under exposure of dredged sediments from a eutrophic bay (2020) (6)
- The Application of Novel Research Technologies by the Deep Pelagic Nekton Dynamics of the Gulf of Mexico (DEEPEND) Consortium (2018) (6)
- DEEP-SEA CORAL COLLECTION PROTOCOLS A synthesis of field experience from deep-sea coral researchers, designed to build our national capacity to document deep-sea coral diversity (2006) (6)
- The Aquatic Symbiosis Genomics Project: probing the evolution of symbiosis across the tree of life (2021) (5)
- Phenylpropanoids in alkaloid-free species of Phoebe (1985) (5)
- Microscopic and Genetic Characterization of Bacterial Symbionts With Bioluminescent Potential in Pyrosoma atlanticum (2021) (4)
- Broward County coastal ocean water quality study, 2010-2012 (2015) (4)
- Suppression subtractive hybridization PCR isolation of cDNAs from a Caribbean soft coral (2001) (4)
- Complete Genome Sequence of Microcystis aeruginosa FD4, Isolated from a Subtropical River in Southwest Florida (2020) (4)
- After the Taxonomic Identification Phase: Addressing the Functions of Symbiotic Communities Within Marine Invertebrates (2019) (3)
- Genetic and phylogenetic evidence for horizontal gene transfer among ecologically disparate groups of marine Vibrio (2013) (3)
- A New Prokaryotic Farnesyldiphosphate Synthase from the Octocoral Eunicea Fusca: Differential Display, Inverse PCR, Cloning, and Characterization (2008) (3)
- Complete mitogenome sequences of smooth hammerhead sharks, Sphyrna zygaena, from the eastern and western Atlantic (2017) (3)
- Fine grained compositional analysis of Port Everglades Inlet microbiome using high throughput DNA sequencing (2018) (3)
- Corrigendum to: Advancing genomics through the Global Invertebrate Genomics Alliance (GIGA) (2017) (2)
- Draft genome of Bugula neritina, a colonial animal packing powerful symbionts and potential medicines (2020) (2)
- Microbiome and bacterioplankton rRNA gene sequence data collected from Gulf of Mexico seawater samples, Cruises DP01 and DP02 from May 2015 - August 2015 (2017) (1)
- The Global Invertebrate Genomics Alliance (GIGA) (2013) (1)
- In Vitro Production of Marine-Derived Compounds (1997) (1)
- Analysis of microbial communities reflect diel vertical migration in the Gulf of Mexico (2017) (1)
- Draft Genome Sequence of Nitrosomonas sp. Strain APG5, a Betaproteobacterial Ammonia-Oxidizing Bacterium Isolated from Beach Sand (2019) (1)
- The Many Faces of Gene Expression Profiling: Transcriptome Analyses Applied Towards Elucidating Marine Organismal Interactions and Metabolism. (2009) (1)
- Andros Island Flora and Fauna in the New Millennium (2000) (1)
- Taking a Cat Map: Genome Analysis by Supercomputer (1994) (0)
- Recirculation suction large break LOCA analysis of the Santa Maria De Garona Nuclear Power Plant using TRAC-BF1 (G1J1) (1992) (0)
- Investigating the Microbiota of Stormwater Treatment Areas (2018) (0)
- DEEPEND: Deep-Pelagic Nekton Dynamics of the Gulf of Mexico (2015) (0)
- Some Preservation Techniques for (Deep Water) Coral Samples for Subsequent Molecular Studies: A Special Supplement from Harbor Branch Oceanographic Institute (2006) (0)
- Characterizing Marine Biodiversity through the Global Invertebrate Genomics Alliance (GIGA) (2019) (0)
- Evolution of group I introns in Porifera: new evidence for intron mobility and implications for DNA barcoding (2017) (0)
- Microbiomes and Dynamic Genomes of Anglerfish Bacterial Symbionts in the Gulf of Mexico (2018) (0)
- Three complete mitochondrial genomes of shortfin mako sharks, Isurus oxyrinchus, from the Atlantic and Pacific Oceans (2022) (0)
- Holo-Transcriptome Sequences From the Tropical Marine Sponge Cinachyrella alloclada. (2022) (0)
- An Example of Microbiology Crowdfunding: The Skin Deep MIcrobiome Project (2015) (0)
- Draft genome of Bugula neritina, a colonial animal packing powerful symbionts and potential medicines (2020) (0)
- Change and stasis of distinct sediment microbiomes across Port Everglades Inlet (PEI) and the adjacent coral reefs (2023) (0)
- Updates of the Global Invertebrate Genome Alliance (GIGA) for Comparative Genomics (2016) (0)
- Cooperation and competition shape ecological resistance during periodic spatial disturbance of engineered bacteria (2017) (0)
- Anglerfish Bacterial Symbionts and Seawater from the Northern Gulf of Mexico (2017) (0)
- Editorial: Deep Pelagic Ecosystem Dynamics in a Highly Impacted Water Column: The Gulf of Mexico After Deepwater Horizon (2021) (0)
- Deep-Pelagic Research in the Gulf of Mexico: The DEEPEND Consortium (2017) (0)
- Author response: Diverse deep-sea anglerfishes share a genetically reduced luminous symbiont that is acquired from the environment (2019) (0)
- The Perfect Microbial Symbiosis Hotel: Marine Sponges (2004) (0)
- Two New Species of Viburnum (Viburnaceae) from the Tropical Andes (2017) (0)
- A Local Biotech Experiment: FAU is Administering the Pilot Course While IRCC Provides Classrooms and Labs (2005) (0)
- Morphological and transcriptional effects of crude oil and dispersant exposure on the marine sponge Cinachyrella alloclada. (2023) (0)
- Molecular Evolution of Numt, a Recent Transfer and Tandem Amplification of Mitochondrial DNA into the Nuclear Genome of the Domestic Cat (Felis catus) (1995) (0)
- PICRUSt Analysis of Shallow and Deep-Water Microbial Communities in the Gulf of Mexico (2018) (0)
- Understanding deep-pelagic ecosystem dynamics: A new research initiative in the Gulf of Mexico (DEEPEND). (2015) (0)
- Nitrosomonas supralitoralis sp. nov., an ammonia-oxidizing bacterium from beach sand in a supralittoral zone (2022) (0)
- Complete bacterial symbiont genome sequences from anglerfish Cryptopsaras couesii and Melanocetus johnsonii (2017) (0)
- Holo-Transcriptome Sequences from the Tropical Marine Sponge Cinachyrella alloclada. (2021) (0)
- 1-8-2018 Is There a Link between Aging and Microbiome Diversity in Exceptional Mammalian Longevity ? Graham (2018) (0)
- Metagenomic characterization of the cyanobacterial harmful algal blooms in Lake Okeechobee (2020) (0)
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