Katerina Kechris
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American statistician, professor of biostatistics
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Katerina Kechrismathematics Degrees
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Katerina Kechris's Degrees
- PhD Biostatistics University of Washington
- Masters Biostatistics University of Washington
- Bachelors Mathematics University of Washington
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Why Is Katerina Kechris Influential?
(Suggest an Edit or Addition)According to Wikipedia, Katerina Joanna Kechris is an American statistician, a professor of biostatistics and informatics in the Colorado School of Public Health, and a regional president of the International Biometric Society. Her research focuses on the use of omics data to study relations between genetics and disease.
Katerina Kechris's Published Works
Number of citations in a given year to any of this author's works
Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- The multiMiR R package and database: integration of microRNA–target interactions along with their disease and drug associations (2014) (311)
- Comb-p: software for combining, analyzing, grouping and correcting spatially correlated P-values (2012) (297)
- Genetical genomic determinants of alcohol consumption in rats and humans (2009) (148)
- Plasma sphingolipids associated with chronic obstructive pulmonary disease phenotypes. (2015) (118)
- Meta-analysis of epigenome-wide association studies in neonates reveals widespread differential DNA methylation associated with birthweight (2019) (117)
- Regulation of cellular plasticity in Drosophila imaginal disc cells by the Polycomb group, trithorax group and lama genes (2005) (110)
- Peripheral blood mononuclear cell gene expression in chronic obstructive pulmonary disease. (2013) (104)
- Biomarkers Predictive of Exacerbations in the SPIROMICS and COPDGene Cohorts (2017) (99)
- Structural and functional characterization of endothelial microparticles released by cigarette smoke (2016) (98)
- Multiple biomarkers predict disease severity, progression and mortality in COPD (2017) (92)
- Cohort Profile: Pregnancy And Childhood Epigenetics (PACE) Consortium (2017) (90)
- Narrow Band Ultraviolet B Treatment for Human Vitiligo Is Associated with Proliferation, Migration, and Differentiation of Melanocyte Precursors. (2015) (87)
- The value of blood cytokines and chemokines in assessing COPD (2017) (85)
- Transcriptional Adaptation of Drug-tolerant Mycobacterium tuberculosis During Treatment of Human Tuberculosis. (2015) (84)
- Perfluoroalkyl Substances during Pregnancy and Offspring Weight and Adiposity at Birth: Examining Mediation by Maternal Fasting Glucose in the Healthy Start Study (2017) (76)
- The genomic determinants of alcohol preference in mice (2008) (73)
- Common Genetic Polymorphisms Influence Blood Biomarker Measurements in COPD (2016) (66)
- Exposure to Maternal Diabetes in Utero and DNA Methylation Patterns in the Offspring. (2013) (64)
- The association of plasma biomarkers with computed tomography-assessed emphysema phenotypes (2014) (63)
- Hepatitis C virus RNA: dinucleotide frequencies and cleavage by RNase L. (2007) (60)
- Metabolomics and transcriptomics pathway approach reveals outcome-specific perturbations in COPD (2018) (54)
- The PhenoGen Informatics website: tools for analyses of complex traits (2007) (50)
- A systems genetic analysis of alcohol drinking by mice, rats and men: Influence of brain GABAergic transmission (2011) (49)
- Hypertensive Disorders of Pregnancy and DNA Methylation in Newborns (2019) (49)
- MSPrep - Summarization, normalization and diagnostics for processing of mass spectrometry-based metabolomic data (2014) (48)
- The association of adiponectin with computed tomography phenotypes in chronic obstructive pulmonary disease. (2013) (47)
- Genomic Insights into Acute Alcohol Tolerance (2008) (47)
- Blood Transcriptional Biomarkers for Active Tuberculosis among Patients in the United States: a Case-Control Study with Systematic Cross-Classifier Evaluation (2015) (46)
- Gene expression changes in C57BL/6J and DBA/2J mice following prenatal alcohol exposure. (2012) (45)
- Quantitative exploration of the occurrence of lateral gene transfer by using nitrogen fixation genes as a case study. (2006) (44)
- Joint MiRNA/mRNA Expression Profiling Reveals Changes Consistent with Development of Dysfunctional Corpus Luteum after Weight Gain (2015) (42)
- Finding important sites in protein sequences (2002) (41)
- Maternal obesity alters fatty acid oxidation, AMPK activity, and associated DNA methylation in mesenchymal stem cells from human infants (2017) (40)
- High-Risk Human Papillomavirus E7 Alters Host DNA Methylome and Represses HLA-E Expression in Human Keratinocytes (2017) (39)
- Epigenetic marks of in utero exposure to gestational diabetes and childhood adiposity outcomes: the EPOCH study (2018) (37)
- Hedgehog targets in the Drosophila embryo and the mechanisms that generate tissue-specific outputs of Hedgehog signaling (2010) (37)
- Generalizing Moving Averages for Tiling Arrays Using Combined P-Value Statistics (2010) (34)
- Prenatal exposure to per- and polyfluoroalkyl substances and infant growth and adiposity: the Healthy Start Study. (2019) (33)
- Whole Brain and Brain Regional Coexpression Network Interactions Associated with Predisposition to Alcohol Consumption (2013) (33)
- Detecting DNA regulatory motifs by incorporating positional trends in information content (2004) (33)
- Movement decline across lifespan of Caenorhabditis elegans mutants in the insulin/insulin‐like signaling pathway (2017) (32)
- Metabolite-related dietary patterns and the development of islet autoimmunity (2019) (29)
- Integrative omics approach identifies interleukin-16 as a biomarker of emphysema. (2013) (28)
- The discordant method: a novel approach for differential correlation (2016) (25)
- Prenatal Exposure to Per- and Polyfluoroalkyl Substances, Umbilical Cord Blood DNA Methylation, and Cardio-Metabolic Indicators in Newborns: The Healthy Start Study (2020) (25)
- Biphasic pro-melanogenic and pro-apoptotic effects of all-trans-retinoic acid (ATRA) on human melanocytes: time-course study. (2013) (24)
- Longitudinal DNA methylation differences precede type 1 diabetes (2020) (23)
- Multiple Amino Acid Sequence Alignment Nitrogenase Component 1: Insights into Phylogenetics and Structure-Function Relationships (2013) (22)
- The dilemma of choosing the ideal permutation strategy while estimating statistical significance of genome-wide enrichment (2014) (21)
- Metabolomic similarities between bronchoalveolar lavage fluid and plasma in humans and mice (2017) (20)
- Differential correlation for sequencing data (2017) (20)
- A prospective study of associations between in utero exposure to gestational diabetes mellitus and metabolomic profiles during late childhood and adolescence (2019) (20)
- Predictive Modeling for Metabolomics Data. (2020) (19)
- Bronchoalveolar Lavage Fluid from COPD Patients Reveals More Compounds Associated with Disease than Matched Plasma (2019) (19)
- Unsupervised discovery of phenotype-specific multi-omics networks (2019) (18)
- A Practical Guide to Metabolomics Software Development (2021) (18)
- Disease Progression Modelling in Chronic Obstructive Pulmonary Disease (COPD). (2020) (18)
- Meta-analysis of peripheral blood gene expression modules for COPD phenotypes (2017) (17)
- Gene and metabolite time-course response to cigarette smoking in mouse lung and plasma (2017) (17)
- Soluble receptor for advanced glycation end products (sRAGE) as a biomarker of COPD (2020) (17)
- Identifying Protein–metabolite Networks Associated with COPD Phenotypes (2020) (15)
- Conserved Amino Acid Sequence Features in the α Subunits of MoFe, VFe, and FeFe Nitrogenases (2009) (14)
- Aptardi predicts polyadenylation sites in sample-specific transcriptomes using high-throughput RNA sequencing and DNA sequence (2021) (14)
- Condition-adaptive fused graphical lasso (CFGL): An adaptive procedure for inferring condition-specific gene co-expression network (2018) (14)
- Adaptation of Mycobacterium tuberculosis to Impaired Host Immunity in HIV-Infected Patients. (2016) (14)
- A Bayesian Approach for Learning Gene Networks Underlying Disease Severity in COPD (2018) (14)
- Using the Phenogen website for ‘in silico’ analysis of morphine‐induced analgesia: identifying candidate genes (2011) (13)
- Plasma Metabolomic Signatures of Chronic Obstructive Pulmonary Disease and the Impact of Genetic Variants on Phenotype-Driven Modules (2020) (12)
- Prediction of alternatively skipped exons and splicing enhancers from exon junction arrays (2008) (12)
- Patterns of relatedness and genetic diversity inferred from whole genome sequencing of archival blood fluke miracidia (Schistosoma japonicum) (2021) (11)
- Uncovering the liver’s role in immunity through RNA co-expression networks (2016) (11)
- The oxylipin profile is associated with development of type 1 diabetes: the Diabetes Autoimmunity Study in the Young (DAISY) (2021) (11)
- Metabolomic Profiling Reveals Sex Specific Associations with Chronic Obstructive Pulmonary Disease and Emphysema (2021) (11)
- A2ML1 and otitis media: novel variants, differential expression, and relevant pathways (2019) (11)
- Qualitative Differences Between the IFNα subtypes and IFNβ Influence Chronic Mucosal HIV-1 Pathogenesis (2020) (11)
- Model based heritability scores for high-throughput sequencing data (2017) (11)
- Hands-on Workshops as An Effective Means of Learning Advanced Technologies Including Genomics, Proteomics and Bioinformatics (2013) (11)
- Analysis of SARS-CoV-2 Mutations Over Time Reveals Increasing Prevalence of Variants in the Spike Protein and RNA-Dependent RNA Polymerase (2021) (10)
- Longitudinal analysis of SARS-CoV-2 spike and RNA-dependent RNA polymerase protein sequences reveals the emergence and geographic distribution of diverse mutations (2021) (10)
- Bayesian inference of networks across multiple sample groups and data types. (2018) (10)
- Vitamin D deficiency is associated with respiratory symptoms and airway wall thickening in smokers with and without COPD: a prospective cohort study (2020) (9)
- Genetics of gene expression characterizes response to selective breeding for alcohol preference (2014) (9)
- Genetical Genomic Analysis of Complex Phenotypes Using the PhenoGen Website (2010) (9)
- Metabolomics‐related nutrient patterns at seroconversion and risk of progression to type 1 diabetes (2020) (9)
- MCMSeq: Bayesian hierarchical modeling of clustered and repeated measures RNA sequencing experiments (2020) (8)
- miR-MaGiC improves quantification accuracy for small RNA-seq (2018) (8)
- Pre-analytic Considerations for Mass Spectrometry-Based Untargeted Metabolomics Data. (2019) (7)
- Reproducibility of mass spectrometry based metabolomics data (2021) (7)
- Multi-omics subtyping pipeline for chronic obstructive pulmonary disease (2021) (7)
- Sex-specific metabolite biomarkers of NAFLD in youth: a prospective study in the EPOCH cohort. (2020) (7)
- Distribution and Ecological Niches of Nitrogenases (2015) (7)
- tidyMicro: a pipeline for microbiome data analysis and visualization using the tidyverse in R (2021) (6)
- An effective processing pipeline for harmonizing DNA methylation data from Illumina’s 450K and EPIC platforms for epidemiological studies (2020) (6)
- MSCAT: A Machine Learning Assisted Catalog of Metabolomics Software Tools (2021) (6)
- Mucus plugging on computed tomography and chronic bronchitis in chronic obstructive pulmonary disease (2021) (6)
- Predictive modeling of miRNA-mediated predisposition to alcohol-related phenotypes in mouse (2018) (6)
- Biomarkers Predictive of Exacerbations in the SPIROMICS and COPDGene Cohorts. (2020) (6)
- A graphical model method for integrating multiple sources of genome-scale data (2013) (5)
- Prediction of Motifs Based on a Repeated-Measures Model for Integrating Cross-Species Sequence and Expression Data (2009) (5)
- Identifying miRNA-mRNA Networks Associated With COPD Phenotypes (2021) (5)
- Phospholipid Levels at Seroconversion Are Associated With Resolution of Persistent Islet Autoimmunity: The Diabetes Autoimmunity Study in the Young (2021) (4)
- c-REDUCE: Incorporating sequence conservation to detect motifs that correlate with expression (2008) (4)
- Insight into genetic regulation of miRNA in mouse brain (2019) (4)
- Placental Insulin/IGF-1 Signaling, PGC-1α, and Inflammatory Pathways Are Associated With Metabolic Outcomes at 4–6 Years of Age: The ECHO Healthy Start Cohort (2021) (4)
- Estimating Motifs Under Order Restrictions (2005) (4)
- Human Mobility Associated with Risk of Schistosoma japonicum Infection in Sichuan, China. (2021) (4)
- Mining Discriminative Distance Context of Transcription Factor Binding Sites on ChIP Enriched Regions (2007) (3)
- Epigenome-Wide Association Study of Infant Feeding and DNA Methylation in Infancy and Childhood in a Population at Increased Risk for Type 1 Diabetes (2021) (3)
- DNA methylation near the INS gene is associated with INS genetic variation (rs689) and type 1 diabetes in the Diabetes Autoimmunity Study in the Young (2020) (3)
- Genetic analysis of a murine QTL for diet restriction on chromosome 15 (2015) (3)
- Mechanism-aware imputation: a two-step approach in handling missing values in metabolomics (2022) (2)
- An Augmented High-Dimensional Graphical Lasso Method to Incorporate Prior Biological Knowledge for Global Network Learning (2022) (2)
- Metabolomic Profiles in Childhood and Adolescence Are Associated with Fetal Overnutrition (2022) (2)
- Translational Metabolomics And Genomics For Chronic Obstructive Pulmonary Disease (COPD): Discovering A Promising Role For Sphingolipids (2012) (2)
- Predictors of bovine Schistosoma japonicum infection in rural sichuan, china. (2022) (2)
- A Metabolomic Severity Score for Airflow Obstruction and Emphysema (2022) (2)
- Post-GWAS Prioritization Through Data Integration Provides Novel Insights on Chronic Obstructive Pulmonary Disease (2017) (2)
- Lawrence Berkeley National Laboratory Lawrence Berkeley National Laboratory Title Detecting DNA regulatory motifs by incorporating positional trends in information content Permalink (2004) (2)
- Changes in the Co-Expression of Innate Immunity Genes During Persistent Islet Autoimmunity are Associated with Progression of Islet Autoimmunity: The Diabetes Autoimmunity Study in the Young (DAISY). (2022) (2)
- Bayesian Analysis of High-Throughput Quantitative Measurement of Protein-DNA Interactions (2011) (2)
- Novel Metabolic Subtypes in Pregnant Women and Risk of Early Childhood Obesity in Offspring (2023) (1)
- PaIRKAT: A pathway integrated regression-based kernel association test with applications to metabolomics and COPD phenotypes (2021) (1)
- Semi-Supervised Learning Using Hierarchical Mixture Models: Gene Essentiality Case Study (2021) (1)
- Metabolomic Profiling Reveals Sex Specific Associations with COPD and Emphysema (2020) (1)
- Reproducibility of mass spectrometry based metabolomics data (2021) (1)
- The Discordant Method: A Novel Approach for Differential Correlation. (2015) (1)
- Uncovering the liver’s role in immunity through RNA co-expression networks (2016) (1)
- Associations between the activity of placental nutrient-sensing pathways and neonatal and postnatal metabolic health: the ECHO Healthy Start cohort (2020) (1)
- Comparing Statistical Tests for Differential Network Analysis of Gene Modules (2021) (1)
- miRNA‐regulated transcription associated with mouse strains predisposed to hypnotic effects of ethanol (2018) (1)
- Molecular Evolution , Substitution Models , and Phylogenies (1)
- Development of a tissue augmented Bayesian model for expression quantitative trait loci analysis (2019) (1)
- Using a spatial point process framework to characterize lung computed tomography scans. (2019) (1)
- Modeling considerations for using expression data from multiple species (2013) (1)
- Fat content in infant mesenchymal stem cells prospectively associates with childhood adiposity and fasting glucose (2022) (1)
- A Mediation Approach to Discovering Causal Relationships between the Metabolome and DNA Methylation in Type 1 Diabetes (2021) (1)
- Meta-analysis of epigenome-wide association studies in neonates reveals widespread differential DNA methylation associated with birthweight (2019) (1)
- Sex-Specific Differences in MicroRNA Expression During Human Fetal Lung Development (2022) (1)
- An Oxylipin-Related Nutrient Pattern and Risk of Type 1 Diabetes in the Diabetes Autoimmunity Study in the Young (DAISY) (2023) (1)
- Inverse probability weighting is an effective method to address selection bias during the analysis of high dimensional data (2021) (1)
- Lung tissue shows divergent gene expression between chronic obstructive pulmonary disease and idiopathic pulmonary fibrosis (2022) (1)
- 351-OR: Investigation of Novel Vitamin D Metabolites and Risk of Islet Autoimmunity and Progression to Type 1 Diabetes (2022) (1)
- Alcohol Use Disorders are Associated with a Unique Impact on Airways Epithelial Cell Gene Expression. (2020) (1)
- Ambient air pollution during pregnancy and DNA methylation in umbilical cord blood, with potential mediation of associations with infant adiposity: The Healthy Start study. (2022) (1)
- A Bayesian Approach for Learning Gene Networks Underlying Disease Severity in COPD (2016) (0)
- Abstract 2899: Significance of microRNA:target interaction in bladder cancer metastasis. (2013) (0)
- Effect of In Utero Smoke Exposure on MicroRNA Expression in Human Lung Development (2019) (0)
- Abstract 3391: Interaction of microRNAs and target genes in bladder cancer metastasis (2012) (0)
- DNA Methylation at Birth Is Associated with Adiposity and Infant Growth during the First Six Months of Life in the Healthy Start Study (2018) (0)
- Model based heritability scores for high-throughput sequencing data (2017) (0)
- Effective Subject Representation based on Multi-omics Disease Networks using Graph Embedding (2022) (0)
- miR-MaGiC improves quantification accuracy for small RNA-seq (2018) (0)
- MRI data harmonization across sites using ComBat enhances classification of meningioma and glioma brain-tumors in dogs: a case study (2022) (0)
- Works Title Genetical genomic determinants of alcohol consumption in rats and humans (2009) (0)
- RCFGL: Rapid Condition adaptive Fused Graphical Lasso and application to modeling brain region co-expression networks (2022) (0)
- Intrauterine Smoke Exposure, microRNA Expression during Human Lung Development, and Childhood Asthma (2023) (0)
- Developing a Metabolomic Risk Score for Forced Expiratory Volume in One Second (FEV1) in COPD (2022) (0)
- Latent Space Semi-Supervised Time Series Data Clustering (2021) (0)
- Longitudinal DNA methylation differences precede type 1 diabetes (2020) (0)
- Prenatal exposures to perfluoroalkyl and polyfluoroalkyl substances are associated with sex-specific differences in infant size and body composition: The Healthy Start Study (2016) (0)
- Upregulation of Oxidative Stress Genes in the Airway Epithelium in Alcohol Use Disorders (2019) (0)
- Venn Diagrams for Total Differentially Expressed Genes by Diet, Weight Gain and Fat Mass. (2015) (0)
- Discussion on ‘Statistical contributions to bioinformatics: Design, modelling, structure learning and integration’ by Jeffrey S. Morris and Veerabhadran Baladandayuthapani (2017) (0)
- Proteomic Fingerprinting: A novel privacy concern (2022) (0)
- MCMSeq: Bayesian hierarchical modeling of clustered and repeated measures RNA sequencing experiments (2020) (0)
- Chronic Marijuana Use Is Associated with Gene Expression Changes in BAL (2022) (0)
- The Impact of Regulatory Genetic Variants on the Developing Human Lung (2019) (0)
- Prevalence of abnormal spirometry in individuals with a smoking history and no known obstructive lung disease (2023) (0)
- An effective processing pipeline for harmonizing DNA methylation data from Illumina’s 450K and EPIC platforms for epidemiological studies (2021) (0)
- Genetic analysis of a murine QTL for diet restriction on chromosome 15 (2015) (0)
- Semi-supervised Embedding for Scalable and Accurate Time Series Clustering (2022) (0)
- Granzyme B+ CD4 T cells accumulate in the colon during chronic HIV-1 infection (2022) (0)
- Altered Immunoglobulin Repertoire and Decreased IgA Somatic Hypermutation in the Gut during Chronic HIV-1 Infection (2022) (0)
- tidyMicro: a pipeline for microbiome data analysis and visualization using the tidyverse in R (2021) (0)
- The discordant method: a novel approach for differential correlation. (2017) (0)
- Sex-Specific Impact of Intrauterine Smoke Exposure on MicroRNA Expression During Human Lung Development (2022) (0)
- High-Risk Human Papillomavirus E7 Alters Host DNA Methylome and Represses HLA-E Expression in Human Keratinocytes (2017) (0)
- Metabolomics and transcriptomics pathway approach reveals outcome-specific perturbations in COPD (2018) (0)
- Deep learning on graphs for multi-omics classification of COPD (2023) (0)
- Significant Subgraph Detection in Multi-omics Networks for Disease Pathway Identification (2022) (0)
- Assessing physical and environmental predictors of bovine Schistosoma japonicum infection in rural China (2021) (0)
- Differential correlation for sequencing data (2017) (0)
- Alkynyl arachidonic acid promotes anti-inflammatory M 2 polarization of macrophages against acute myocardial infarction via attenuating the expression of iNOS and PKM 2 (2016) (0)
- Predictive modeling of miRNA-mediated predisposition to alcohol-related phenotypes in mouse (2018) (0)
- Systems genetics analysis of the LXS recombinant inbred mouse strains:Genetic and molecular insights into acute ethanol tolerance (2020) (0)
- NetSHy: network summarization via a hybrid approach leveraging topological properties (2022) (0)
- Genome-wide analysis of oxylipins and oxylipin profiles in a pediatric population (2023) (0)
- The Impact of Vaping on Lung Function and Nasal Epithelial Gene Expression in Adolescents (2022) (0)
- Sex-based differences in placental DNA methylation profiles related to gestational age: an NIH ECHO meta-analysis (2023) (0)
- Metabolomic similarities between bronchoalveolar lavage fluid and plasma in humans and mice (2017) (0)
- Insight into genetic regulation of miRNA in mouse brain (2019) (0)
- Unsupervised Discovery of Gene Expression Networks Associated With Pulmonary Function, Emphysema, and Smoking in COPDGene (2023) (0)
- Effect of microRNA expression on alcoholism : A study in a panel of recombinant inbred mouse strains (2016) (0)
- The Discordant R Package: A Novel Approach to Differential Correlation (2017) (0)
- marr: Maximum Rank Reproducibility (2021) (0)
- Interleukin-16 Expression Is Down Regulated In Peripheral Blood Mononuclear Cells From Patients With COPD (2011) (0)
- Chronic Obstructive Pulmonary Disease (COPD) Is Associated With Differential Gene Expression Of Lymphocyte Subsets In Peripheral Blood Mononuclear Cells (2011) (0)
- Mechanism-aware imputation: a two-step approach in handling missing values in metabolomics (2022) (0)
- Deep reinforcement learning based valve scheduling for pollution isolation in water distribution network. (2019) (0)
- Composition of Control and High Fat High Fructose (HFHF) Experimental Diets. (2015) (0)
- Differentially Expressed Corpus Luteum miRNAs after High Fat High Fructose Diet. (2015) (0)
- Post-GWAS Prioritization Through Data Integration Provides Novel Insights on Chronic Obstructive Pulmonary Disease (2016) (0)
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