Kateryna Makova | Academic Influence

Kateryna Makova's AcademicInfluence.com Rankings

Kateryna Makova

Biology

#15119

World Rank

#19034

Historical Rank

Genetics

#1773

World Rank

#1887

Historical Rank

biology Degrees

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Biology

Kateryna Makova's Degrees

PhD Genetics University of California, Berkeley
Masters Genetics University of California, Berkeley
Bachelors Biology University of California, Berkeley

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Why Is Kateryna Makova Influential?

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According to Wikipedia, Kateryna D. Makova is an American biologist, currently the Francis R. and Helen M. Pentz professor of biology in the Eberly College of Science at Pennsylvania State University. She is also a published author, being widely cited by her peers and widely held in libraries.

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Kateryna Makova's Published Works

Number of citations in a given year to any of this author's works

Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author

Published Works

Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution (2004) (2417)
Initial sequence of the chimpanzee genome and comparison with the human genome (2005) (2222)
Genome sequence of the Brown Norway rat yields insights into mammalian evolution (2004) (2053)
Evolutionary and Biomedical Insights from the Rhesus Macaque Genome (2007) (1309)
Towards complete and error-free genome assemblies of all vertebrate species (2020) (557)
Complete Khoisan and Bantu genomes from southern Africa (2010) (448)
Strong male-driven evolution of DNA sequences in humans and apes (2002) (245)
The genome-wide determinants of human and chimpanzee microsatellite evolution. (2007) (244)
The K(A)/K(S) ratio test for assessing the protein-coding potential of genomic regions: an empirical and simulation study. (2002) (234)
Divergence in the spatial pattern of gene expression between human duplicate genes. (2003) (225)
Male-driven evolution. (2002) (223)
The effects of chromatin organization on variation in mutation rates in the genome (2015) (203)
The origin, evolution, and functional impact of short insertion–deletion variants identified in 179 human genomes (2013) (201)
Maternal age effect and severe germ-line bottleneck in the inheritance of human mitochondrial DNA (2014) (192)
Chromosome-wide SNPs reveal an ancient origin for Plasmodium falciparum (2002) (164)
A framework for collaborative analysis of ENCODE data: making large-scale analyses biologist-friendly. (2007) (151)
A genome-wide analysis of common fragile sites: What features determine chromosomal instability in the human genome? (2012) (140)
What Is a Microsatellite: A Computational and Experimental Definition Based upon Repeat Mutational Behavior at A/T and GT/AC Repeats (2010) (119)
Dynamics of mitochondrial heteroplasmy in three families investigated via a repeatable re-sequencing study (2011) (112)
Harnessing cloud computing with Galaxy Cloud (2011) (106)
The Intervention Nurses Start Infants Growing on Healthy Trajectories (INSIGHT) study (2014) (104)
Development and assessment of an optimized next-generation DNA sequencing approach for the mtgenome using the Illumina MiSeq. (2014) (99)
Strong and weak male mutation bias at different sites in the primate genomes: insights from the human-chimpanzee comparison. (2006) (97)
Genome analyses substantiate male mutation bias in many species (2011) (94)
A time- and cost-effective strategy to sequence mammalian Y Chromosomes: an application to the de novo assembly of gorilla Y (2016) (89)
Worldwide polymorphism at the MC1R locus and normal pigmentation variation in humans (2005) (89)
DO VARIATIONS IN SUBSTITUTION RATES AND MALE MUTATION BIAS CORRELATE WITH LIFE‐HISTORY TRAITS? A STUDY OF 32 MAMMALIAN GENOMES (2011) (88)
Genomic Environment Predicts Expression Patterns on the Human Inactive X Chromosome (2006) (87)
Y and W Chromosome Assemblies: Approaches and Discoveries. (2017) (85)
Microsatellites indicate a high frequency of multiple paternity in Apodemus (Rodentia) (1999) (79)
Evolution and Survival on Eutherian Sex Chromosomes (2009) (77)
Accurate typing of short tandem repeats from genome-wide sequencing data and its applications (2015) (72)
Genomic analyses of sex chromosome evolution. (2009) (71)
A matter of life or death: how microsatellites emerge in and vanish from the human genome. (2011) (71)
Episodic evolution of growth hormone in primates and emergence of the species specificity of human growth hormone receptor. (2001) (70)
A Macaque's-Eye View of Human Insertions and Deletions: Differences in Mechanisms (2007) (67)
Mammalian Male Mutation Bias: Impacts of Generation Time and Regional Variation in Substitution Rates (2006) (62)
Distinct Mutational Behaviors Differentiate Short Tandem Repeats from Microsatellites in the Human Genome (2012) (62)
Bottleneck and selection in the germline and maternal age influence transmission of mitochondrial DNA in human pedigrees (2019) (62)
Insertions and deletions are male biased too: a whole-genome analysis in rodents. (2004) (61)
DNA Polymorphism and Selection at the Melanocortin‐1 Receptor Gene in Normally Pigmented Southern African Individuals (2003) (61)
Microsattelite markers in wood mouse and striped field mouse (genus Apodemus) (1998) (58)
Human-macaque comparisons illuminate variation in neutral substitution rates (2008) (58)
Human DNA sequence variation in a 6.6-kb region containing the melanocortin 1 receptor promoter. (2001) (57)
Horse domestication and conservation genetics of Przewalski's horse inferred from sex chromosomal and autosomal sequences. (2009) (52)
Gene Survival and Death on the Human Y Chromosome (2012) (52)
A Massively Parallel Sequencing Approach Uncovers Ancient Origins and High Genetic Variability of Endangered Przewalski's Horses (2011) (51)
Rapid and asymmetric divergence of duplicate genes in the human gene coexpression network (2006) (50)
Investigating mito-nuclear interactions in human admixed populations (2019) (49)
Age-related accumulation of de novo mitochondrial mutations in mammalian oocytes and somatic tissues (2020) (47)
Oscillating Evolution of a Mammalian Locus with Overlapping Reading Frames: An XLαs/ALEX Relay (2005) (46)
The (r)evolution of SINE versus LINE distributions in primate genomes: sex chromosomes are important. (2010) (46)
Artifactual mutations resulting from DNA lesions limit detection levels in ultrasensitive sequencing applications (2016) (45)
Integration and Fixation Preferences of Human and Mouse Endogenous Retroviruses Uncovered with Functional Data Analysis (2016) (43)
Deciphering highly similar multigene family transcripts from Iso-Seq data with IsoCon (2018) (42)
Non-B DNA: a major contributor to small- and large-scale variation in nucleotide substitution frequencies across the genome (2021) (41)
A genome-wide view of mutation rate co-variation using multivariate analyses (2011) (40)
Strong purifying selection at genes escaping X chromosome inactivation. (2010) (39)
Long-read sequencing technology indicates genome-wide effects of non-B DNA on polymerization speed and error rate (2018) (38)
Rescuing Alu: Recovery of New Inserts Shows LINE-1 Preserves Alu Activity through A-Tail Expansion (2012) (36)
Noise-cancelling repeat finder: uncovering tandem repeats in error-prone long-read sequencing data (2018) (35)
The complete sequence of a human Y chromosome (2022) (35)
Child Weight Gain Trajectories Linked To Oral Microbiota Composition (2018) (35)
Coding region structural heterogeneity and turnover of transcription start sites contribute to divergence in expression between duplicate genes (2009) (34)
A Population Phylogenetic View of Mitochondrial Heteroplasmy (2017) (33)
Elevated mitochondrial genome variation after 50 generations of radiation exposure in a wild rodent (2017) (31)
Ride the wavelet: A multiscale analysis of genomic contexts flanking small insertions and deletions. (2009) (31)
Evolution of X-Degenerate Y Chromosome Genes in Greater Apes: Conservation of Gene Content in Human and Gorilla, But Not Chimpanzee (2009) (29)
Microsatellite Interruptions Stabilize Primate Genomes and Exist as Population-Specific Single Nucleotide Polymorphisms within Individual Human Genomes (2014) (27)
Mature Microsatellites: Mechanisms Underlying Dinucleotide Microsatellite Mutational Biases in Human Cells (2013) (24)
Segmenting the human genome based on states of neutral genetic divergence (2013) (23)
High Satellite Repeat Turnover in Great Apes Studied with Short- and Long-Read Technologies (2018) (23)
Deep-Coverage MPS Analysis of Heteroplasmic Variants within the mtGenome Allows for Frequent Differentiation of Maternal Relatives (2018) (23)
Comparative genomics. (2004) (22)
Streamlined analysis of duplex sequencing data with Du Novo (2016) (22)
Controlling for contamination in re-sequencing studies with a reproducible web-based phylogenetic approach. (2014) (21)
Genomic landscape of human, bat, and ex vivo DNA transposon integrations. (2014) (20)
Harnessing cloud-computing for biomedical research with Galaxy Cloud (2011) (17)
Pronounced somatic bottleneck in mitochondrial DNA of human hair (2019) (17)
Complete Khoisan and Bantu genomes from southern (2010) (17)
Dosage regulation, and variation in gene expression and copy number of human Y chromosome ampliconic genes (2019) (15)
RecoverY: k-mer-based read classification for Y-chromosome-specific sequencing and assembly (2018) (15)
Correcting palindromes in long reads after whole-genome amplification (2017) (15)
DiscoverY: a classifier for identifying Y chromosome sequences in male assemblies (2019) (15)
Isolation of binary species-specific PCR-based markers and their value for diagnostic applications. (2000) (14)
Functional data analysis for computational biology (2019) (14)
A computational approach to candidate gene prioritization for X-linked mental retardation using annotation-based binary filtering and motif-based linear discriminatory analysis (2011) (14)
High Levels of Copy Number Variation of Ampliconic Genes across Major Human Y Haplogroups (2018) (13)
Representational difference analysis to distinguish cryptic species (1999) (13)
Dynamic evolution of great ape Y chromosomes (2020) (13)
Reverse Transcription Errors and RNA–DNA Differences at Short Tandem Repeats (2016) (12)
Selection and thermostability suggest G-quadruplexes are novel functional elements of the human genome (2021) (10)
Increased yield of tri- and tetranucleotide heterospecific microsatellites from unenriched small-insert libraries. (1998) (10)
Tetranucleotide microsatellite markers for the Brown-headed Cowbird Molothrus ater (2001) (9)
IWTomics: testing high‐resolution sequence‐based ‘Omics' data at multiple locations and scales (2018) (9)
Family reunion via error correction: an efficient analysis of duplex sequencing data (2018) (8)
Evolution of Microsatellite Alleles in Four Species of Mice (Genus Apodemus) (2000) (8)
Ampliconic Genes on the Great Ape Y Chromosomes: Rapid Evolution of Copy Number but Conservation of Expression Levels (2020) (7)
Advanced age increases frequencies of de novo mitochondrial mutations in macaque oocytes and somatic tissues (2022) (6)
Investigating mitonuclear interactions in human admixed populations (2019) (5)
Metabolomic profiling of stool of two‐year old children from the INSIGHT study reveals links between butyrate and child weight outcomes (2021) (5)
High inter- and intraspecific turnover of satellite repeats in great apes (2018) (4)
Human L1 Transposition Dynamics Unraveled with Functional Data Analysis. (2020) (3)
Mitochondrial Genome: Clues about the Evolution of Extant Equids and Genomic Diversity of Horse Breeds (2013) (3)
Polygenic risk score based on weight gain trajectories is predictive of childhood obesity (2019) (2)
Constructing a polygenic risk score for childhood obesity using functional data analysis (2021) (2)
Using Statistics to Shed Light on the Dynamics of the Human Genome: A Review (2015) (2)
Distinct mutational behaviors distinguish short tandem repeats from microsatellites in the human genome (2012) (2)
Domain Duplication and Gene Elongation (2006) (2)
Associations between stool micro-transcriptome, gut microbiota, and infant growth (2021) (2)
Distinct sequencing success at non-B-DNA motifs (2022) (2)
RecoverY: K-mer based read classification for Y-chromosome specific sequencing and assembly (2017) (2)
Mito-nuclear effects uncovered in admixed populations (2018) (1)
Development and assessment of an optimized next-generation DNA sequencing approach for the mtgenome using the Illumina (2015) (1)
correction: Chromosome-wide SNPs reveal an ancient origin for Plasmodium falciparum (2002) (1)
Microsatellite evolution in mice (Apodemus): origin of alleles, multiple paternity, and mutation rate at Chernobyl (1999) (1)
C. Thomas Caskey (1938–2022) (2022) (1)
Variation in G-quadruplex sequence and topology differentially impacts human DNA polymerase fidelity. (2022) (1)
Corrigendum: A genome-wide analysis of common fragile sites: What features determine chromosomal instability in the human genome? (2016) (1)
Targeted sequencing of ampliconic gene transcripts from total human male testis RNA (2018) (1)
Copy number variation of ampliconic genes across major human Y haplogroups (2017) (1)
Rapid Evolution of Genes on the Human X-chromosome (2013) (1)
Young sex chromosomes discovered in white-eye birds (2019) (1)
Whole-genome sequence and assembly of the Javan gibbon (Hylobates moloch) (2022) (1)
Infant Weight Gain Trajectories Linked to Oral Microbiome Composition (2017) (1)
Noncanonical DNA structures are drivers of genome evolution. (2023) (1)
determine chromosomal instability in the human genome ? A genome-wide analysis of common fragile sites : What features Material Supplemental (2012) (1)
Non-B DNA affects polymerization speed and error rate in sequencers and living cells (2017) (1)
Correcting palindromes in long reads after whole-genome amplification (2018) (0)
SMBE proposal to the government of Japan. (2012) (0)
Functional data analysis of omics data: how does the genomic landscape influence integration and fixation of endogenous retroviruses? (2017) (0)
Genome analysis Functional data analysis for computational biology (2019) (0)
An evolutionary view of a biomedically important gene family (2020) (0)
Abstract B17: Role of Sall2 transcription factor under genotoxic stress: A transcriptomic approach (2016) (0)
Utilizing comparative genomics to measure male mutation bias : An updated evolutionary approach (2015) (0)
Results of Classification When Only (GATA)n Was Used (2006) (0)
Transcript Isoform Diversity of Ampliconic Genes on the Y Chromosome of Great Apes (2023) (0)
Narayanan large-scale analyses biologist-friendly A framework for collaborative analysis of ENCODE data : Making data (2007) (0)
RUNNING TITLE: EVOLUTIONARY HISTORY OF PRZEWALSKI'S HORSES (2011) (0)
microsatellite evolution The genome-wide determinants of human and chimpanzee Material Supplemental (2007) (0)
Whole-genome amplification (WGA) create specific chimeric fragments, which consist mainly of palindrome sequences. We developed the tool Pacasus to detect and correct these palindromic sequences in long reads, for example from PacBio and Nanopore (2017) (0)
172. Child Weight Gain Trajectories Associated With Oral Microbiota Composition (2019) (0)
IsoCon: Deciphering highly similar multigene family transcripts from Iso-Seq data (2018) (0)
Streamlined analysis of duplex sequencing data with Du Novo (2016) (0)
Title: Non-B DNA affects polymerization speed and error rate in sequencers and living cells (2017) (0)
Exploring the Effects of Mitonuclear Interactions on Mitochondrial DNA Gene Expression in Humans (2022) (0)
Deciphering highly similar multigene family transcripts from Iso-Seq data with IsoCon (2018) (0)
Child Weight Gain Trajectories Linked To Oral Microbiota Composition (2018) (0)
Authors and affiliations (2012) (0)
Transitions at CpG dinucleotides : are replication errors to blame ? (2004) (0)
DiscoverY: a classifier for identifying Y chromosome sequences in male assemblies (2019) (0)
Family reunion via error correction: an efficient analysis of duplex sequencing data (2020) (0)

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