Konstantinos T. Konstantinidis
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Konstantinos T. Konstantinidischemistry Degrees
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Konstantinos T. Konstantinidisengineering Degrees
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Konstantinos T. Konstantinidis's Degrees
- Bachelors Chemical Engineering University of Patras
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(Suggest an Edit or Addition)Konstantinos T. Konstantinidis's Published Works
Number of citations in a given year to any of this author's works
Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- DNA-DNA hybridization values and their relationship to whole-genome sequence similarities. (2007) (3404)
- High throughput ANI analysis of 90K prokaryotic genomes reveals clear species boundaries (2018) (1841)
- Genomic insights that advance the species definition for prokaryotes. (2005) (1656)
- Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea (2017) (990)
- The enveomics collection: a toolbox for specialized analyses of microbial genomes and metagenomes (2016) (804)
- Towards a Genome-Based Taxonomy for Prokaryotes (2005) (724)
- The bacterial species definition in the genomic era (2006) (576)
- Microbial species delineation using whole genome sequences (2015) (537)
- Unexpected nondenitrifier nitrous oxide reductase gene diversity and abundance in soils (2012) (478)
- Strengths and Limitations of 16S rRNA Gene Amplicon Sequencing in Revealing Temporal Microbial Community Dynamics (2014) (463)
- Genomic analysis of the uncultivated marine crenarchaeote Cenarchaeum symbiosum (2006) (454)
- Direct Comparisons of Illumina vs. Roche 454 Sequencing Technologies on the Same Microbial Community DNA Sample (2012) (443)
- Trends between gene content and genome size in prokaryotic species with larger genomes. (2004) (433)
- Dehalococcoides mccartyi gen. nov., sp. nov., obligately organohalide-respiring anaerobic bacteria relevant to halogen cycling and bioremediation, belong to a novel bacterial class, Dehalococcoidia classis nov., order Dehalococcoidales ord. nov. and family Dehalococcoidaceae fam. nov., within the ph (2013) (419)
- Bypassing Cultivation To Identify Bacterial Species: Culture-independent genomic approaches identify credibly distinct clusters, avoid cultivation bias, and provide true insights into microbial species (2014) (381)
- Uncultivated microbes in need of their own taxonomy (2017) (379)
- Microbiome of the upper troposphere: Species composition and prevalence, effects of tropical storms, and atmospheric implications (2012) (374)
- MyTaxa: an advanced taxonomic classifier for genomic and metagenomic sequences (2014) (349)
- Prokaryotic taxonomy and phylogeny in the genomic era: advancements and challenges ahead. (2007) (348)
- Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp genome shaped for versatility (2006) (327)
- The Microbial Genomes Atlas (MiGA) webserver: taxonomic and gene diversity analysis of Archaea and Bacteria at the whole genome level (2018) (324)
- Genome sequencing of environmental Escherichia coli expands understanding of the ecology and speciation of the model bacterial species (2011) (311)
- A genomic catalog of Earth’s microbiomes (2020) (295)
- Bypassing Cultivation To Identify Bacterial Species (2014) (277)
- Tundra soil carbon is vulnerable to rapid microbial decomposition under climate warming (2016) (211)
- Comparative Metagenomic Analysis of a Microbial Community Residing at a Depth of 4,000 Meters at Station ALOHA in the North Pacific Subtropical Gyre (2009) (207)
- Toward a More Robust Assessment of Intraspecies Diversity, Using Fewer Genetic Markers (2006) (186)
- Nonpareil: a redundancy-based approach to assess the level of coverage in metagenomic datasets (2014) (172)
- Bacterial species may exist, metagenomics reveal. (2012) (158)
- Metagenomic Insights into the Evolution, Function, and Complexity of the Planktonic Microbial Community of Lake Lanier, a Temperate Freshwater Ecosystem (2011) (149)
- Giant virus diversity and host interactions through global metagenomics (2020) (147)
- Microbial community successional patterns in beach sands impacted by the Deepwater Horizon oil spill (2015) (143)
- Detecting Nitrous Oxide Reductase (nosZ) Genes in Soil Metagenomes: Method Development and Implications for the Nitrogen Cycle (2014) (143)
- Long-term exposure to benzalkonium chloride disinfectants results in change of microbial community structure and increased antimicrobial resistance. (2013) (140)
- Microbial Community Structure and Activity Linked to Contrasting Biogeochemical Gradients in Bog and Fen Environments of the Glacial Lake Agassiz Peatland (2012) (137)
- Estimating coverage in metagenomic data sets and why it matters (2014) (135)
- Global profiling of Shewanella oneidensis MR-1: expression of hypothetical genes and improved functional annotations. (2005) (126)
- Individual genome assembly from complex community short-read metagenomic datasets (2011) (125)
- SAR11 bacteria linked to ocean anoxia and nitrogen loss (2016) (124)
- Nonpareil 3: Fast Estimation of Metagenomic Coverage and Sequence Diversity (2018) (119)
- Soil Microbial Community Responses to a Decade of Warming as Revealed by Comparative Metagenomics (2013) (117)
- Phylogenetic analyses of ribosomal DNA-containing bacterioplankton genome fragments from a 4000 m vertical profile in the North Pacific Subtropical Gyre. (2008) (109)
- Genomic patterns of recombination, clonal divergence and environment in marine microbial populations (2008) (102)
- Comparative systems biology across an evolutionary gradient within the Shewanella genus (2009) (101)
- Warming enhances old organic carbon decomposition through altering functional microbial communities (2017) (99)
- Roadmap for naming uncultivated Archaea and Bacteria (2020) (98)
- Year-Round Shotgun Metagenomes Reveal Stable Microbial Communities in Agricultural Soils and Novel Ammonia Oxidizers Responding to Fertilization (2017) (96)
- Widely Used Benzalkonium Chloride Disinfectants Can Promote Antibiotic Resistance (2018) (95)
- New insights from the biogas microbiome by comprehensive genome-resolved metagenomics of nearly 1600 species originating from multiple anaerobic digesters (2019) (88)
- Genomic determinants of organohalide-respiration in Geobacter lovleyi, an unusual member of the Geobacteraceae (2012) (85)
- Microbial community adaptation to quaternary ammonium biocides as revealed by metagenomics. (2013) (84)
- Temperature sensitivity of organic matter decomposition of permafrost-region soils during laboratory incubations (2016) (73)
- Meeting report: GenBank microbial genomic taxonomy workshop (12–13 May, 2015) (2016) (69)
- Methods for estimating temperature sensitivity of soil organic matter based on incubation data: A comparative evaluation (2015) (64)
- Classifying the uncultivated microbial majority: A place for metagenomic data in the Candidatus proposal. (2015) (63)
- The Chimeric Genome of Sphaerochaeta: Nonspiral Spirochetes That Break with the Prevalent Dogma in Spirochete Biology (2012) (63)
- Unprecedented levels of horizontal gene transfer among spatially co-occurring Shewanella bacteria from the Baltic Sea (2011) (61)
- Anthropogenic effects on bacterial diversity and function along a river-to-estuary gradient in Northwest Greece revealed by metagenomics. (2016) (58)
- Biofilms on Hospital Shower Hoses: Characterization and Implications for Nosocomial Infections (2016) (58)
- Metagenomics Reveals Pervasive Bacterial Populations and Reduced Community Diversity across the Alaska Tundra Ecosystem (2016) (58)
- Responses of tundra soil microbial communities to half a decade of experimental warming at two critical depths (2019) (58)
- Dehalococcoides mccartyi gen. nov., sp. nov., obligately organohalide-respiring anaerobic bacteria relevant to halogen cycling and bioremediation, belong to a novel bacterial class, Dehalococcoidia classis nov., order Dehalococcoidales ord. nov. and family Dehalococcoidaceae fam. nov., within the ph (2015) (58)
- Microbial Community Degradation of Widely Used Quaternary Ammonium Disinfectants (2014) (53)
- More replenishment than priming loss of soil organic carbon with additional carbon input (2018) (52)
- Warming-induced permafrost thaw exacerbates tundra soil carbon decomposition mediated by microbial community (2020) (52)
- The Great Oxidation Event expanded the genetic repertoire of arsenic metabolism and cycling (2020) (52)
- Implications of Genome-Based Discrimination between Clostridium botulinum Group I and Clostridium sporogenes Strains for Bacterial Taxonomy (2015) (51)
- How Much Do rRNA Gene Surveys Underestimate Extant Bacterial Diversity? (2018) (51)
- The Reliability of Metagenome-Assembled Genomes (MAGs) in Representing Natural Populations: Insights from Comparing MAGs against Isolate Genomes Derived from the Same Fecal Sample (2021) (50)
- Inter-phylum HGT has shaped the metabolism of many mesophilic and anaerobic bacteria (2014) (47)
- Gene-informed decomposition model predicts lower soil carbon loss due to persistent microbial adaptation to warming (2020) (46)
- Detection and Diversity of Fungal Nitric Oxide Reductase Genes (p450nor) in Agricultural Soils (2016) (46)
- Drinking Water Microbiome Project: Is it Time? (2019) (46)
- ROCker: accurate detection and quantification of target genes in short-read metagenomic data sets by modeling sliding-window bitscores (2016) (46)
- Correction: Corrigendum: Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea (2018) (43)
- Genomic Diversity of Escherichia Isolates from Diverse Habitats (2012) (43)
- Metagenomics of Two Severe Foodborne Outbreaks Provides Diagnostic Signatures and Signs of Coinfection Not Attainable by Traditional Methods (2016) (43)
- The low diverse gastric microbiome of the jellyfish Cotylorhiza tuberculata is dominated by four novel taxa (2017) (43)
- Quantifying the Importance of the Rare Biosphere for Microbial Community Response to Organic Pollutants in a Freshwater Ecosystem (2017) (43)
- Gene expression analysis of E. coli strains provides insights into the role of gene regulation in diversification (2014) (42)
- Experimental warming reveals positive feedbacks to climate change in the Eurasian Steppe (2017) (41)
- Design and testing of 'genome-proxy' microarrays to profile marine microbial communities. (2008) (40)
- Dynamic models of the complex microbial metapopulation of lake mendota (2016) (40)
- Toward unrestricted use of public genomic data (2019) (40)
- 'Candidatus Dichloromethanomonas elyunquensis' gen. nov., sp. nov., a dichloromethane-degrading anaerobe of the Peptococcaceae family. (2017) (39)
- Evaluation of metatranscriptomic protocols and application to the study of freshwater microbial communities. (2014) (35)
- A user's guide to quantitative and comparative analysis of metagenomic datasets. (2013) (35)
- Similar Microbial Consortia and Genes Are Involved in the Biodegradation of Benzalkonium Chlorides in Different Environments. (2016) (34)
- Single cell genomic and transcriptomic evidence for the use of alternative nitrogen substrates by anammox bacteria (2018) (34)
- Identification of Potential Therapeutic Targets for Burkholderia cenocepacia by Comparative Transcriptomics (2010) (34)
- Genomic Insights into the Convergence and Pathogenicity Factors of Campylobacter jejuni and Campylobacter coli Species (2009) (33)
- Beyond denitrification: The role of microbial diversity in controlling nitrous oxide reduction and soil nitrous oxide emissions (2021) (31)
- “Candidatus Macondimonas diazotrophica”, a novel gammaproteobacterial genus dominating crude-oil-contaminated coastal sediments (2019) (31)
- Correction: Corrigendum: Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea (2018) (31)
- Intensive allochthonous inputs along the Ganges River and their effect on microbial community composition and dynamics (2018) (31)
- Genomic and Transcriptomic Insights into How Bacteria Withstand High Concentrations of Benzalkonium Chloride Biocides (2018) (31)
- Niche differentiation among annually recurrent coastal Marine Group II Euryarchaeota (2019) (29)
- Winter warming in Alaska accelerates lignin decomposition contributed by Proteobacteria (2020) (29)
- Anaerobic degradation of hexadecane and phenanthrene coupled to sulfate reduction by enriched consortia from northern Gulf of Mexico seafloor sediment (2019) (28)
- Decomposition of sediment-oil-agglomerates in a Gulf of Mexico sandy beach (2019) (28)
- High throughput ANI analysis of 90K prokaryotic genomes reveals clear species boundaries (2017) (27)
- Stability, genotypic and phenotypic diversity of Shewanella baltica in the redox transition zone of the Baltic Sea. (2014) (27)
- Comparison of closely related, uncultivated Coxiella tick endosymbiont population genomes reveals clues about the mechanisms of symbiosis (2018) (27)
- Quantifying the changes in genetic diversity within sequence-discrete bacterial populations across a spatial and temporal riverine gradient (2018) (26)
- Microbial Taxonomy Run Amok. (2021) (26)
- Phosphate addition increases tropical forest soil respiration primarily by deconstraining microbial population growth (2019) (25)
- Genomic Characterization and Copy Number Variation of Bacillus anthracis Plasmids pXO1 and pXO2 in a Historical Collection of 412 Strains (2018) (25)
- Metagenomic Signatures of Gut Infections Caused by Different Escherichia coli Pathotypes (2019) (24)
- Ecogenomic characterization of widespread, closely-related SAR11 clades of the freshwater genus "Candidatus Fonsibacter" and proposal of Ca. Fonsibacter lacus sp. nov. (2019) (24)
- MicrobeAnnotator: a user-friendly, comprehensive functional annotation pipeline for microbial genomes (2021) (23)
- Iterative Subtractive Binning of Freshwater Chronoseries Metagenomes Identifies over 400 Novel Species and their Ecologic Preferences. (2020) (23)
- Biotic responses buffer warming‐induced soil organic carbon loss in Arctic tundra (2018) (22)
- Long-Term Warming in Alaska Enlarges the Diazotrophic Community in Deep Soils (2019) (22)
- Microbial functional diversity covaries with permafrost thaw‐induced environmental heterogeneity in tundra soil (2018) (22)
- Glucose addition increases the magnitude and decreases the age of soil respired carbon in a long-term permafrost incubation study (2019) (21)
- Correction: Direct Comparisons of Illumina vs. Roche 454 Sequencing Technologies on the Same Microbial Community DNA Sample (2012) (21)
- SeqCode: a nomenclatural code for prokaryotes described from sequence data (2022) (21)
- The anaerobic digestion microbiome: a collection of 1600 metagenome-assembled genomes shows high species diversity related to methane production (2019) (20)
- imGLAD: accurate detection and quantification of target organisms in metagenomes (2018) (19)
- Reply to: “Re-evaluating the evidence for a universal genetic boundary among microbial species” (2021) (19)
- Genome Sequencing of Five Shewanella baltica Strains Recovered from the Oxic-Anoxic Interface of the Baltic Sea (2012) (18)
- Tundra microbial community taxa and traits predict decomposition parameters of stable, old soil organic carbon (2019) (18)
- A Rieske-Type Oxygenase of Pseudomonas sp. BIOMIG1 Converts Benzalkonium Chlorides to Benzyldimethyl Amine. (2017) (17)
- Comparative Genomics and Phylogenomic Analysis of the Genus Salinivibrio (2019) (17)
- The Role of the Gut Microbiome in Resisting Norovirus Infection as Revealed by a Human Challenge Study (2020) (17)
- Draft Genome Sequence of a Strictly Anaerobic Dichloromethane-Degrading Bacterium (2016) (17)
- The Bacterial Symbionts of Closely Related Hydrothermal Vent Snails With Distinct Geochemical Habitats Show Broad Similarity in Chemoautotrophic Gene Content (2019) (17)
- Phosphorus-related gene content is similar in Prochlorococcus populations from the North Pacific and North Atlantic Oceans (2011) (17)
- Environmental stability impacts the differential sensitivity of marine microbiomes to increases in temperature and acidity (2020) (17)
- Draft Genome Sequence of Bacillus cereus LA2007, a Human-Pathogenic Isolate Harboring Anthrax-Like Plasmids (2017) (16)
- Do airborne microbes matter for atmospheric chemistry and cloud formation? (2014) (16)
- Hidden Diversity within Common Protozoan Parasites as Revealed by a Novel Genomotyping Scheme (2021) (15)
- Effects of timber harvesting on the genetic potential for carbon and nitrogen cycling in five North American forest ecozones (2018) (15)
- Non-denitrifier nitrous oxide reductases dominate marine biomes. (2020) (15)
- Genome sequencing reveals the environmental origin of enterococci and potential biomarkers for water quality monitoring. (2014) (15)
- Genome Repository of Oil Systems (GROS): an interactive and searchable database that expands the catalogued diversity of crude oil-associated microbes. (2020) (15)
- Prevalence of viral photosynthesis genes along a freshwater to saltwater transect in Southeast USA. (2019) (14)
- A novel droplet digital PCR human mtDNA assay for fecal source tracking (2020) (14)
- Genomic comparison between members of the Salinibacteraceae family, and description of a new species of Salinibacter (Salinibacter altiplanensis sp. nov.) isolated from high altitude hypersaline environments of the Argentinian Altiplano. (2018) (13)
- Evaluating the Performance of Oligonucleotide Microarrays for Bacterial Strains with Increasing Genetic Divergence from the Reference Strain (2010) (13)
- Metagenomics as a Public Health Risk Assessment Tool in a Study of Natural Creek Sediments Influenced by Agricultural and Livestock Runoff: Potential and Limitations (2020) (13)
- Using flow cytometry and light-induced fluorescence to characterize the variability and characteristics of bioaerosols in springtime in Metro Atlanta, Georgia (2020) (12)
- Predominance of deterministic microbial community dynamics in salterns exposed to different light intensities. (2019) (11)
- Comparison of vaginal microbiota in gynecologic cancer patients pre‐ and post‐radiation therapy and healthy women (2019) (11)
- Integrated omics elucidate the mechanisms driving the rapid biodegradation of Deepwater Horizon oil in intertidal sediments undergoing oxic-anoxic cycles. (2020) (11)
- Impact of an Urban Sanitation Intervention on Enteric Pathogen Detection in Soils (2021) (11)
- Model-based Comparisons of the Abundance Dynamics of Bacterial Communities in Two Lakes (2020) (10)
- MetaPop: a pipeline for macro- and microdiversity analyses and visualization of microbial and viral metagenome-derived populations (2020) (10)
- Advantages outweigh concerns about using genome sequence as type material for prokaryotic taxonomy. (2020) (10)
- Metagenomic Insights into Bacterial Species (2011) (10)
- Metagenomic insights into the effect of sulfate on enhanced biological phosphorus removal (2021) (10)
- First description of two moderately halophilic and psychrotolerant Mycoplasma species isolated from cephalopods and proposal of Mycoplasma marinum sp. nov. and Mycoplasma todarodis sp. nov. (2019) (10)
- Draft Genome Sequence of Catellicoccus marimammalium, a Novel Species Commonly Found in Gull Feces (2013) (9)
- Genomic Variations Underlying Speciation and Niche Specialization of Shewanella baltica (2019) (8)
- Comparing DNA, RNA and protein levels for measuring microbial dynamics in soil microcosms amended with nitrogen fertilizer (2019) (8)
- Reply to the commentary “Uncultivated microbes—in need of their own nomenclature?” (2018) (8)
- Development of the SeqCode: A proposed nomenclatural code for uncultivated prokaryotes with DNA sequences as type. (2022) (8)
- Divergence in Gene Regulation Contributes to Sympatric Speciation of Shewanella baltica Strains (2017) (7)
- Judicial Opinions 103-111. (2022) (7)
- Description of Candidatus Mesopelagibacter carboxydoxydans and Candidatus Anoxipelagibacter denitrificans: Nitrate-reducing SAR11 genera that dominate mesopelagic and anoxic marine zones. (2021) (7)
- Distinct ecotypes within a natural haloarchaeal population enable adaptation to changing environmental conditions without causing population sweeps (2020) (6)
- Judicial Opinions 112-122. (2022) (6)
- Bacteria Make a Living Breathing the Nitroheterocyclic Insensitive Munitions Compound 3-Nitro-1,2,4-triazol-5-one (NTO). (2021) (6)
- Potential and limitations of metagenomics as a public health risk assessment tool in a study of natural creek sediments influenced by agricultural and livestock runoff. (2020) (5)
- Diversity of microbial communities and genes involved in nitrous oxide emissions in Antarctic soils impacted by marine animals as revealed by metagenomics and 100 metagenome-assembled genomes. (2021) (5)
- Microbial Diversity and Genomics (2005) (5)
- Toward quantifying the adaptive role of bacterial pangenomes during environmental perturbations (2021) (5)
- Changes in the Vaginal Microbiome and Associated Toxicities Following Radiation Therapy for Gynecologic Cancers (2021) (4)
- First record of facultative paedomorphosis in the Macedonian crested newt ( Triturus macedonicus ) and an additional record for the Greek smooth newt ( Lissotriton vulgaris ) from Greece: implications on species conservation and preservation of alternative ontogenetic trajectories (2017) (4)
- Giant virus diversity and host interactions through global metagenomics (2020) (4)
- Predicting sigma28 promoters in eleven Shewanella genomes. (2008) (4)
- Genomic comparisons confirm Giardia duodenalis sub-assemblage AII as a unique species (2022) (4)
- A novel, divergent alkane monooxygenase (alkB) clade involved in crude oil biodegradation. (2021) (4)
- Toward shotgun metagenomic approaches for microbial source tracking sewage spills based on laboratory mesocosms. (2021) (4)
- Opinion: Response to concerns about the use of DNA sequences as types in the nomenclature of prokaryotes. (2020) (4)
- Author Correction: Roadmap for naming uncultivated Archaea and Bacteria (2020) (4)
- Consent insufficient for data release—Response (2019) (4)
- High Arsenic Levels Increase Activity Rather than Diversity or Abundance of Arsenic Metabolism Genes in Paddy Soils (2021) (4)
- Classifying prokaryotic genomes using the Microbial Genomes Atlas (MiGA) webserver (2020) (3)
- MetaPop: a pipeline for macro- and microdiversity analyses and visualization of microbial and viral metagenome-derived populations (2022) (3)
- Reply to Smith and Griffin: Methods, air flows, and conclusions are robust in the DeLeon-Rodriguez et al. study (2013) (3)
- Genome Repository of Oiled Systems (GROS): an interactive and searchable database that expands the catalogued diversity of crude oil-associated microbes (2019) (3)
- Solar salterns as model systems to study the units of bacterial diversity that matter for ecosystem functioning. (2021) (3)
- 'Candidatus ferrigenium straubiae' sp. nov., 'Candidatus ferrigenium bremense' sp. nov., 'Candidatus ferrigenium altingense' sp. nov., are autotrophic Fe(II)-oxidizing bacteria of the family Gallionellaceae. (2022) (3)
- Judicial Opinions 123-127. (2022) (3)
- Time series metagenomic sampling of the Thermopyles, Greece, geothermal springs reveals stable microbial communities dominated by novel sulfur-oxidizing chemoautotrophs. (2020) (3)
- ROCker Models for Reliable Detection and Typing of Short-Read Sequences Carrying β-Lactamase Genes (2020) (2)
- Beach sand oil spills select for generalist microbial populations (2021) (2)
- Gut Microbiome Changes with Acute Diarrheal Disease in Urban Versus Rural Settings in Northern Ecuador. (2021) (2)
- Moving the cataloguing of the "uncultivated majority" forward. (2019) (2)
- Using flow cytometry and light-induced fluorescence technique to characterizethe variability and characteristics of bioaerosols in springtime at Metro Atlanta, Georgia (2018) (2)
- Metagenomic Characterization of Soil Microbial Communities in the Luquillo Experimental Forest (Puerto Rico) and Implications for Nitrogen Cycling (2020) (2)
- Metagenome-based comparisons of decay rates and host-specificity of fecal microbial communities for improved microbial source tracking (2021) (2)
- Dissecting the Species-Specific Virome in Culicoides of Thrace (2022) (2)
- Microbial Diversity in a Military Impacted Lagoon (Vieques, Puerto Rico) as Revealed by Metagenomics (2018) (2)
- Comparing DNA, RNA and protein levels for measuring microbial activity in nitrogen-amended soils (2018) (2)
- RecruitPlotEasy: An Advanced Read Recruitment Plot Tool for Assessing Metagenomic Population Abundance and Genetic Diversity (2022) (2)
- Parallel deployment of passive and composite samplers for surveillance and variant profiling of SARS-CoV-2 in sewage (2022) (2)
- Metagenomics indicate that public health risk may be higher from flooding following dry versus rainy periods. (2022) (2)
- MicrobeAnnotator: a user-friendly, comprehensive microbial genome annotation pipeline (2020) (2)
- Time series metagenomic sampling of the Thermopyles, Greece, geothermal springs reveals stable microbial communities dominated by novel sulfur-oxidizing chemoautotrophs (2020) (2)
- The influence of alfalfa-switchgrass intercropping on microbial community structure and function. (2021) (1)
- Metagenomics-informed soil biogeochemical models projected less carbon loss in tropical soils in response to climate warming (2021) (1)
- Identification and Classification of Prokaryotes using whole-genome sequences. (2021) (1)
- On the Estimation of the Molecular Inaccessible Volume and the Molecular Accessible Surface of a Ligand in Protein Ligand Systems (2021) (1)
- A natural definition for a bacterial strain and clonal complex (2022) (1)
- Erratum for Patin et al., “The Role of the Gut Microbiome in Resisting Norovirus Infection as Revealed by a Human Challenge Study” (2021) (1)
- Genomic analysis of the symbiotic marine crenarchaeon, Cenarchaeumsymbiosum (2006) (1)
- Warming-induced permafrost thaw exacerbates tundra soil carbon decomposition mediated by microbial community (2020) (1)
- Quinone Moieties Link the Microbial Respiration of Natural Organic Matter to the Chemical Reduction of Diverse Nitroaromatic Compounds. (2022) (1)
- Gut microbiome, enteric infections and child growth across a rural–urban gradient: protocol for the ECoMiD prospective cohort study (2021) (1)
- How to Maintain a Healthy Gut Microbiome in Children with Cancer? Gut Microbiome Association with Diet in Children with Solid Tumors Postchemotherapy. (2022) (1)
- Integrating "Omics" Data Into A Biogeochemical Model: A New Model Scheme To Predict Climate Feedbacks From Microbial Function In Tropical Ecosystems (2016) (1)
- Higher pathogen load in children from Mozambique vs. USA revealed by comparative fecal microbiome profiling (2022) (1)
- Minireview Bacterial species may exist, metagenomics reveal (2011) (1)
- Meeting report: GenBank microbial genomic taxonomy workshop (12–13 May, 2015) (2016) (1)
- GSearch: Ultra-Fast and Scalable Microbial Genome Search by Combining Kmer Hashing with Hierarchical Navigable Small World Graphs (2022) (0)
- ZWA: Viral genome assembly and characterization hindrances from virus-host chimeric reads; a refining approach (2021) (0)
- Microbial Motility at the Bottom of North America: Digital Holographic Microscopy and Genomic Motility Signatures in Badwater Spring, Death Valley National Park. (2023) (0)
- Anaerobic degradation of hexadecane and phenanthrene coupled to sulfate reduction by enriched consortia from northern Gulf of Mexico seafloor sediment (2019) (0)
- More replenishment than priming loss of soil organic carbon with additional carbon input (2018) (0)
- Model-based Comparisons of the Abundance Dynamics of Bacterial Communities in Two Lakes (2020) (0)
- Associations between Dietary Intakes and the Gut Microbiome in Children with Solid Tumors after Chemotherapy and Healthy Controls (2021) (0)
- Single cell genomic and transcriptomic evidence for the use of alternative nitrogen substrates by anammox bacteria (2018) (0)
- Transcriptomic and rRNA:rDNA signatures of environmental vs. enteric Enterococcus faecalis isolates under oligotrophic freshwater conditions (2021) (0)
- The evolution of microbial species - a view through the genomic lens (2014) (0)
- Towards estimating the number of strains that make up a natural bacterial population (2023) (0)
- Soil microbes ready to stoke global warming (2020) (0)
- MicrobeAnnotator: a user-friendly, comprehensive functional annotation pipeline for microbial genomes (2021) (0)
- Parallel Deployment of Passive and Automated Samplers in a University Campus for Surveillance and Variant Profiling of SARS-CoV-2 in Sewage Reveals the Usefulness of the Former (2022) (0)
- Effects of timber harvesting on the genetic potential for carbon and nitrogen cycling in five North American forest ecozones (2018) (0)
- Census data for "Beyond denitrification: the role of microbial diversity in controlling nitrous oxide reduction and soil nitrous oxide emissions" (2021) (0)
- Transcriptomic and rRNA:rDNA Signatures of Environmental versus Enteric Enterococcus faecalis Isolates under Oligotrophic Freshwater Conditions (2021) (0)
- Upscaling Strategies for Quantitative Modeling of Soil Microbial Metagenomics in a Biogeochemical Model (2018) (0)
- Metagenomic characterization of creek sediment microbial communities from a major agricultural region in Salinas, California (2019) (0)
- “Candidatus Macondimonas diazotrophica”, a novel gammaproteobacterial genus dominating crude-oil-contaminated coastal sediments (2019) (0)
- Decomposition of sediment-oil-agglomerates in a Gulf of Mexico sandy beach (2019) (0)
- Guidelines for interpreting the International Code of Nomenclature of Prokaryotes and for preparing a Request for an Opinion. (2023) (0)
- Comparative genomic hybridizations using oligonucleotide microarrays to analyze conserved gene content in closely related Burkholderia strains (2007) (0)
- Genomic determinants of organohalide-respiration in Geobacter lovleyi, an unusual member of the Geobacteraceae (2012) (0)
- Metagenomic insights into the effect of sulfate on enhanced biological phosphorus removal (2021) (0)
- A Novel Droplet Digital PCR Human mtDNA Assay for Global Fecal Source Tracking (2019) (0)
- Lower Soil Carbon Loss Due to Persistent Microbial Adaptation to Climate Warming (2020) (0)
- Abstract 720: Comparison of the gut microbiome between children with solid tumor receiving chemotherapy and healthy children (2022) (0)
- Microbial Diversity in a Military Impacted Lagoon (Vieques, Puerto Rico) and description of “Candidatus Biekeibacterium resiliens” gen. nov., sp. nov. comprising a new bacterial family (2021) (0)
- METAGENOME ANALYSIS OF AN ENRICHMENT CULTURE THAT DEGRADES THE 3-NITRO-1,2,4-TRIAZOL-5-ONE (NTO) EXPLOSIVE (2020) (0)
- Reply to the commentary “Uncultivated microbes—in need of their own nomenclature?” (2018) (0)
- Oral Session I 10 : 15 AM-12 : 30 PM Saturday March 12 McClung Auditorium 10 : 00 AM – Coffee Break 10 : 15 AM 1 : Metabolic Pathways Of Hydrocarbon-degrading Bacteria From The Deepwater Horizon Oil Spill (2016) (0)
- Hungry microbes in melting tundra could accelerate greenhouse effect (2020) (0)
- Supplementary material to "Using flow cytometry and light-induced fluorescence technique to characterizethe variability and characteristics of bioaerosols in springtime at Metro Atlanta, Georgia" (2018) (0)
- Study design and rationale for the PAASIM project: a matched cohort study on urban water supply improvements and infant enteric pathogen infection, gut microbiome development and health in Mozambique (2022) (0)
- Does microbial diversity in nitrous oxide reducers regulate soil nitrous oxide emissions (2019) (0)
- Rapid changes in coastal ocean microbiomes uncoupled with shifts in environmental variables. (2022) (0)
- Novel municipal sewage-associated bacterial genomes and their potential in source tracking (2021) (0)
- Impact of Glucocorticoids on the Gut Microbiome with or without Anti-PD-L1 (2019) (0)
- Title Stability , genotypic and phenotypic diversity of Shewanella baltica in the redox transition zone of the Baltic Sea Permalink (2014) (0)
- Roadmap for naming uncultivated Archaea and Bacteria (2020) (0)
- Bacterial species may exist , metagenomics revealemi (2011) (0)
- Author Correction: A genomic catalog of Earth’s microbiomes (2021) (0)
- From qualitative to quantitative insect metabarcoding: an in tandem multilocus mosquito identification methodology (2020) (0)
- Measuring the CCN and IN ability of bacterial isolates: implications for the southeastern United States and Puerto Rico (2015) (0)
- Genomics Tools to Understand Microbial Responses to Oiling in Coastal Ecosystems (2021) (0)
- Discovery of the Streamlined Haloarchaeon Halorutilus salinus, Comprising a New Order Widespread in Hypersaline Environments across the World (2023) (0)
- Microbially enhanced methane uptake under warming enlarges ecosystem carbon sink in a Tibetan alpine grassland (2022) (0)
- Judicial Opinion 128. (2023) (0)
- Environmental stability impacts the differential sensitivity of marine microbiomes to increases in temperature and acidity (2020) (0)
- Incorporating Functional Gene Quantification into Traditional Decomposition Models (2014) (0)
- Accelerated soil carbon loss by biological changes under warming in Alaskan tundra (2016) (0)
- Author Correction: Roadmap for naming uncultivated Archaea and Bacteria (2020) (0)
- How Systematic and Applied Microbiology will deal with two nomenclature codes (ICNP and SeqCode) for prokaryotes, and which classification standards are recommended for new taxa descriptions. (2022) (0)
- Publisher Correction: A genomic catalog of Earth’s microbiomes (2020) (0)
- Genome-Wide Proteomics and Quantitative Analyses on Halophilic Archaea (2008) (0)
- PUNCS: Towards Predictive Understanding of Nitrogen Cycling in Soils (2015) (0)
- Genomics Tools and Microbiota: Applications to Response in Coastal Ecosystems (2021) (0)
- Experimental warming reveals positive feedbacks to climate change in the Eurasian Steppe (2016) (0)
- Sulfur oxidation and reduction are coupled to nitrogen fixation in the roots of a salt marsh foundation plant species (2023) (0)
- Abstract LB-362: Vaginal microbiome associated with patient-reported sexual dysfunction and physician-reported vaginal adverse events in gynecologic cancer women across radiotherapy (2020) (0)
- Erratum to "First description of two moderately halophilic and psychrotolerant Mycoplasma species isolated from cephalopods and proposal of Mycoplasma marinum sp. nov. and Mycoplasma todarod is sp. nov" [Syst. Appl. Microbiol. 42 (2019) 457-467]. (2019) (0)
- Quantifying the changes in genetic diversity within sequence-discrete bacterial populations across a spatial and temporal riverine gradient (2018) (0)
- Additional file 1: Figure S1. of Meeting report: GenBank microbial genomic taxonomy workshop (12â 13 May, 2015) (2016) (0)
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What Schools Are Affiliated With Konstantinos T. Konstantinidis?
Konstantinos T. Konstantinidis is affiliated with the following schools:
