Linda Petzold

Q: What Schools Are Affiliated With Linda Petzold

Linda Petzold is affiliated with the following schools: University of California, Santa Barbara, University of Illinois Urbana-Champaign

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Linda Petzold

Computer Science

#2552

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#2665

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#1108

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Database

#935

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#983

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#280

USA Rank

computer-science Degrees

Linda Petzold

Engineering

#1891

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#2688

Historical Rank

#670

USA Rank

Mechanical Engineering

#102

World Rank

#124

Historical Rank

#43

USA Rank

engineering Degrees

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Why Is Linda Petzold Influential?

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According to Wikipedia, Linda Ruth Petzold is a professor of computer science and mechanical engineering at the University of California, Santa Barbara, where she is also listed as affiliated faculty in the department of mathematics. Her research concerns differential algebraic equations and the computer simulation of large real-world social and biological networks.

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Linda Petzold's Published Works

Number of citations in a given year to any of this author's works

Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author

Published Works

Numerical solution of initial-value problems in differential-algebraic equations (1996) (2464)
Computer methods for ordinary differential equations and differential-algebraic equations (1998) (2326)
Automatic Selection of Methods for Solving Stiff and Nonstiff Systems of Ordinary Differential Equations (1983) (840)
A description of dassl: a differential/algebraic system solver (1982) (739)
Efficient step size selection for the tau-leaping simulation method. (2006) (604)
The slow-scale stochastic simulation algorithm. (2005) (536)
Differential/Algebraic Equations are not ODE's (1982) (492)
ODE METHODS FOR THE SOLUTION OF DIFFERENTIAL/ALGEBRAIC SYSTEMS (1984) (477)
Stiffness in stochastic chemically reacting systems: The implicit tau-leaping method (2003) (466)
Efficient formulation of the stochastic simulation algorithm for chemically reacting systems. (2004) (457)
Using Krylov Methods in the Solution of Large-Scale Differential-Algebraic Systems (1994) (445)
A New Look at Proper Orthogonal Decomposition (2003) (438)
Improved leap-size selection for accelerated stochastic simulation (2003) (435)
Adjoint Sensitivity Analysis for Differential-Algebraic Equations: The Adjoint DAE System and Its Numerical Solution (2002) (363)
Differential-algebraic equations (2008) (324)
Perspective: Stochastic algorithms for chemical kinetics. (2013) (294)
Avoiding negative populations in explicit Poisson tau-leaping. (2005) (254)
Numerical methods and software for sensitivity analysis of differential-algebraic systems (1986) (246)
Integrating machine learning and multiscale modeling—perspectives, challenges, and opportunities in the biological, biomedical, and behavioral sciences (2019) (246)
Multiscale stochastic simulation algorithm with stochastic partial equilibrium assumption for chemically reacting systems (2005) (220)
Adaptive explicit-implicit tau-leaping method with automatic tau selection. (2007) (194)
Rheology of reconstituted type I collagen gel in confined compression (1997) (185)
Stabilization of Constrained Mechanical Systems with DAEs and Invariant Manifolds (1995) (182)
Sensitivity analysis of discrete stochastic systems. (2005) (179)
Algorithms and Software for Stochastic Simulation of Biochemical Reacting Systems (2008) (175)
Projected implicit Runge-Kutta methods for differential-algebraic equations (1990) (166)
A multiscale measure for mixing (2005) (164)
Numerical solution of nonlinear differential equations with algebraic constraints I: Convergence results for backward differentiation formulas (1986) (163)
Model reduction for chemical kinetics: an optimization approach (1999) (155)
Multiscale Modeling Meets Machine Learning: What Can We Learn? (2019) (149)
Numerical solution of highly oscillatory ordinary differential equations (1997) (149)
StochKit2: software for discrete stochastic simulation of biochemical systems with events (2011) (148)
Stochastic modelling of gene regulatory networks (2005) (143)
Consistent Initial Condition Calculation for Differential-Algebraic Systems (1998) (138)
Error Estimation for Reduced-Order Models of Dynamical Systems (2003) (132)
Numerical solution of nonlinear differential equations with algebraic contraints II: practical implications (1986) (131)
An efficient numerical method for highly oscillatory ordinary differential equations. (1978) (121)
CANONICAL FORMS AND SOLVABLE SINGULAR SYSTEMS OF DIFFERENTIAL EQUATIONS (1983) (119)
Design of new Daspk for Sensitivity Analysis (1999) (119)
A neuropeptide speeds circadian entrainment by reducing intercellular synchrony (2013) (119)
Stability of Computational Methods for Constrained Dynamics Systems (1991) (114)
Accuracy limitations and the measurement of errors in the stochastic simulation of chemically reacting systems (2006) (108)
The numerical solution of delay-differential-algebraic equations of retarded and neutral type (1995) (107)
Legitimacy of the stochastic Michaelis-Menten approximation. (2011) (106)
Adjoint sensitivity analysis for differential-algebraic equations: algorithms and software☆ (2002) (104)
Order results for implicit Runge-Kutta methods applied to differential/algebraic systems (1986) (103)
Sensitivity analysis of differential-algebraic equations and partial differential equations (2005) (103)
Optimal control of mixing in Stokes fluid flows (2006) (100)
Approximation methods for the consistent initialization of differential-algebraic equations (1988) (99)
Consistency and Stability of Tau-Leaping Schemes for Chemical Reaction Systems (2005) (99)
Software and algorithms for sensitivity analysis of large-scale differential algebraic systems (2000) (98)
Observations on an adaptive moving grid method for one-dimensional systems of partial differential equations (1987) (96)
Efficient Parallelization of the Stochastic Simulation Algorithm for Chemically Reacting Systems On the Graphics Processing Unit (2010) (95)
Regulation of Cell-Type-Specific Transcriptomes by miRNA Networks During Human Brain Development (2018) (89)
Logarithmic Direct Method for Discrete Stochastic Simulation of Chemically Reacting Systems ∗ (2006) (89)
The numerical stability of leaping methods for stochastic simulation of chemically reacting systems. (2004) (87)
Sensitivity analysis of differential-algebraic equations: A comparison of methods on a special problem ✩ (2000) (86)
Moving Mesh Methods with Upwinding Schemes for Time-Dependent PDEs (1997) (86)
Simulation of fluid slip at 3D hydrophobic microchannel walls by the lattice Boltzmann method (2005) (85)
Algorithms and software for ordinary differential equations and differential-algebraic equations, part II: higher-order methods and software packages (1995) (84)
Accelerated stochastic simulation of the stiff enzyme-substrate reaction. (2005) (84)
The diffusive finite state projection algorithm for efficient simulation of the stochastic reaction-diffusion master equation. (2010) (84)
Linear noise approximation is valid over limited times for any chemical system that is sufficiently large. (2012) (82)
Kinetic modeling of biological systems. (2009) (82)
Adjoint sensitivity analysis for time-dependent partial differential equations with adaptive mesh refinement (2004) (81)
Halo orbit mission correction maneuvers using optimal control (2002) (78)
Stability of Moving Mesh Systems of Partial Differential Equations (1998) (77)
An SQP method for the optimal control of large-scale dynamical systems (2000) (75)
A Posteriori Error Estimation and Global Error Control for Ordinary Differential Equations by the Adjoint Method (2005) (74)
The multinomial simulation algorithm for discrete stochastic simulation of reaction-diffusion systems. (2009) (73)
Detection of a MicroRNA Signal in an In Vivo Expression Set of mRNAs (2007) (73)
Reaction-diffusion master equation in the microscopic limit. (2011) (72)
Differential/algebraic systems and matrix pencils (1983) (68)
Dynamic Iteration Using Reduced Order Models: A Method for Simulation of Large Scale Modular Systems (2002) (67)
Sensitivity Measures for Oscillating Systems: Application to Mammalian Circadian Gene Network (2008) (66)
Asymptotic stability of linear delay differential-algebraic equations and numerical methods (1997) (66)
Research and Education in Computational Science and Engineering (2016) (60)
Spatial Stochastic Dynamics Enable Robust Cell Polarization (2013) (59)
The numerical solution of higher index differential/algebraic equations by implicit methods (1989) (59)
Functional network inference of the suprachiasmatic nucleus (2016) (55)
Stochastic Simulation Service: Bridging the Gap between the Computational Expert and the Biologist (2016) (54)
Automated estimation of rare event probabilities in biochemical systems. (2011) (53)
Accelerated maximum likelihood parameter estimation for stochastic biochemical systems (2012) (52)
Core module biomarker identification with network exploration for breast cancer metastasis (2012) (50)
A hybrid multiscale kinetic Monte Carlo method for simulation of copper electrodeposition (2008) (50)
Ontogeny of Circadian Rhythms and Synchrony in the Suprachiasmatic Nucleus (2017) (47)
On order reduction for Runge-Kutta methods applies to differential algebraic systems and to stiff systems of ODEs (1990) (47)
Efficient integration over discontinuities for differential-algebraic systems (2002) (47)
for Using Stochastic Epidemiological Models to Evaluate Conservation Strategies for Endangered Amphibians published in Journal of the Royal Society Interface (2017) (46)
Synchrony and entrainment properties of robust circadian oscillators (2008) (46)
Refining the weighted stochastic simulation algorithm. (2009) (46)
WAVOS: a MATLAB toolkit for wavelet analysis and visualization of oscillatory systems (2012) (45)
Slow Scale Tau-leaping Method. (2008) (43)
Numerical Optimal Control of Parabolic PDES Using DASOPT (1997) (42)
Numerical solution of differential-algebraic equations in mechanical systems simulation (1992) (42)
Numerical Simulation of an Electroosmotic Micromixer (2003) (42)
Reaction rates for mesoscopic reaction-diffusion kinetics. (2014) (42)
DASPK: A new high order and adaptive time-integration technique with applications to mantle convection with strongly temperature-and pressure-dependent rheology (1995) (41)
Inferring single-cell gene expression mechanisms using stochastic simulation (2015) (38)
Applied Mathematics at the U.S. Department of Energy: Past, Present and a View to the Future (2008) (37)
A Numerical Study of Transient Ignition in a Counterflow Nonpremixed Methane-Air Flame Using Adaptive Time Integration (2000) (37)
GillesPy: A Python Package for Stochastic Model Building and Simulation (2016) (37)
Numerical solution of boundary value problems in differential-algebraic systems (1989) (36)
Simulation of the transient, compressible, gas-dynamic behavior of catalytic-combustion ignition in stagnation flows (1998) (36)
State-dependent doubly weighted stochastic simulation algorithm for automatic characterization of stochastic biochemical rare events. (2011) (35)
Projected collocation for higher-order higher-index differential-algebraic equations (1992) (35)
GPU-based simulations of fracture in idealized brick and mortar composites (2015) (35)
COOPT — a software package for optimal control of large-scale differential—algebraic equation systems (2001) (34)
Computational Algorithm for Dynamic Optimization of Chemical Vapor Deposition Processes in Stagnation Flow Reactors (2000) (34)
Parallel simulation for a fish schooling model on a general‐purpose graphics processing unit (2009) (34)
Stochastic Modeling of Gene Regulatory Networks † (2005) (33)
How the Spatial Position of Individuals Affects Their Influence on Swarms: A Numerical Comparison of Two Popular Swarm Dynamics Models (2013) (32)
Algorithms and software for ordinary differential equations and differential-algebraic equations, part I: Euler methods and error estimation (1995) (32)
Oscillator model reduction preserving the phase response: application to the circadian clock. (2008) (32)
An Efficient Newton-Type Iteration for the Numerical Solution of Highly Oscillatory Constrained Multibody Dynamic Systems (1998) (32)
Macromolecular Crowding Regulates the Gene Expression Profile by Limiting Diffusion (2016) (31)
Implicit Methods in Combustion and Chemical Kinetics Modeling (1985) (31)
The Role of Dimerisation and Nuclear Transport in the Hes1 Gene Regulatory Network (2014) (30)
Wavelet Measurement Suggests Cause of Period Instability in Mammalian Circadian Neurons (2011) (30)
Proceedings of the Sixth SIAM Conference on Parallel Processing for Scientific Computing, PPSC 1993, Norfolk, Virginia, USA, March 22-24, 1993 (1993) (30)
The subtle business of model reduction for stochastic chemical kinetics. (2009) (29)
MOLNs: A cloud platform for interactive, reproducible and scalable spatial stochastic computational experiments in systems biology using PyURDME (2015) (29)
Stochastic Modeling of Gene Regulatory Networks y (2005) (29)
An adaptive moving mesh method with static rezoning for partial differential equations (2003) (28)
Numerical Methods for Differential-Algebraic Equations (1998) (28)
Validity conditions for stochastic chemical kinetics in diffusion-limited systems. (2014) (28)
Runge-Kutta-Chebyshev projection method (2006) (27)
Recent developments in the numerical solution of differential/algebraic systems (1989) (27)
State-dependent biasing method for importance sampling in the weighted stochastic simulation algorithm. (2010) (26)
Velocity Response Curves Support the Role of Continuous Entrainment in Circadian Clocks (2010) (26)
Core modular blood and brain biomarkers in social defeat mouse model for post traumatic stress disorder (2013) (25)
Regularization of Higher-Index Differential-Algebraic Equations with Rank-Deficient Constraints (1997) (25)
Experimentally Validated Reconstruction and Analysis of a Genome-Scale Metabolic Model of an Anaerobic Neocallimastigomycota Fungus (2021) (25)
Stochastic Algorithms for Chemical Kinetics (2013) (25)
Bayesian inference of elastic properties with resonant ultrasound spectroscopy. (2017) (25)
Undergraduate Computational Science and Engineering Education (2011) (24)
Systems biology approach to understanding post-traumatic stress disorder. (2015) (24)
Asymptotic stability of Hessenberg delay differential-algebraic equations of retarded or neutral type (1998) (23)
Adaptive algorithms for optimal control of time‐dependent partial differential‐algebraic equation systems (2003) (22)
OPUS: A Fortran Program for Unsteady Opposed-Flowed Flames (2000) (22)
Graph-based semi-supervised learning with genomic data integration using condition-responsive genes applied to phenotype classification (2018) (22)
Bitsliced High-Performance AES-ECB on GPUs (2015) (22)
Mechanical feedback coordinates cell wall expansion and assembly in yeast mating morphogenesis (2018) (22)
Finite Difference Methods for Boundary Value Problems (1998) (22)
OPTIMAL PERFORMANCE OF THE HEAT-SHOCK GENE REGULATORY NETWORK (2005) (22)
Quantitative Biology: Theory, Computational Methods, and Models (2018) (21)
A Subspace Error Estimate for Linear Systems (2002) (21)
The impact of stochastic microstructures on the macroscopic fracture properties of brick and mortar composites (2015) (21)
An iterative method for simulation of large scale modular systems using reduced order models (2000) (20)
Computational Challenges in Mechanical Systems Simulation (1994) (19)
Accuracy of the Michaelis–Menten approximation when analysing effects of molecular noise (2015) (19)
Improving the Identifiability of Neural Networks for Bayesian Inference (2017) (19)
Effect of reactant size on discrete stochastic chemical kinetics. (2007) (19)
Local error estimates for adaptive simulation of the reaction-diffusion master equation via operator splitting (2013) (19)
Confidence from uncertainty - A multi-target drug screening method from robust control theory (2010) (18)
Examination of the Slip Boundary Condition by µ-PIV and Lattice Boltzmann Simulations (2002) (18)
In Silico Identification of Microbial Partners to Form Consortia with Anaerobic Fungi (2018) (18)
The time dependent propensity function for acceleration of spatial stochastic simulation of reaction-diffusion systems (2014) (16)
BiP Clustering Facilitates Protein Folding in the Endoplasmic Reticulum (2014) (16)
Functional neuronal circuitry and oscillatory dynamics in human brain organoids (2022) (16)
Methods and Software for Differential-Algebraic Systems (1990) (15)
A multiscale measure for mixing and its applications (2003) (15)
A stepsize control strategy for stiff systems of ordinary differential equations (1994) (15)
An exact and efficient first passage time algorithm for reaction-diffusion processes on a 2D-lattice (2014) (15)
A stabilized explicit Lagrange multiplier based domain decomposition method for parabolic problems (2008) (15)
The Effect of Problem Perturbations on Nonlinear Dynamical Systems and their Reduced-Order Models (2005) (15)
The effect of cell geometry on polarization in budding yeast (2018) (15)
A framework for discrete stochastic simulation on 3D moving boundary domains (2016) (14)
Elastic Properties of Novel Co- and CoNi-Based Superalloys Determined through Bayesian Inference and Resonant Ultrasound Spectroscopy (2018) (14)
Identification of influential proteins in the classical retinoic acid signaling pathway (2018) (14)
SOI Processing of a Ring Electrokinetic Chaotic Micromixer (2003) (14)
Language and Runtime Support for Automatic Configuration and Deployment of Scientific Computing Software over Cloud Fabrics (2012) (14)
Bayesian Inference over the Stiefel Manifold via the Givens Representation (2017) (13)
Michaelis-Menten speeds up tau-leaping under a wide range of conditions. (2011) (13)
Numerical Methods and Software for Sensitivity Analysis of Diierential-algebraic Systems (1995) (13)
Parallel solution of large-scale differential-algebraic systems (1995) (13)
A top-down approach to mechanistic biological modeling: application to the single-chain antibody folding pathway. (2008) (13)
I act, therefore I judge: Network sentiment dynamics based on user activity change (2013) (12)
Comment on "nested stochastic simulation algorithm for chemical kinetic systems with disparate rates" [J. Chem. Phys. 123, 194107 (2005)]. (2007) (12)
Systems Analysis of the Insulin Signaling Pathway (2008) (12)
Automatic identification of model reductions for discrete stochastic simulation. (2012) (12)
Using stochastic epidemiological models to evaluate conservation strategies for endangered amphibians (2017) (12)
High-performance simulation of fracture in idealized ‘brick and mortar’ composites using adaptive Monte Carlo minimization on the GPU (2016) (12)
Stochastic Simulation of Biochemical Systems on the Graphics Processing Unit (2007) (11)
Control of neural systems at multiple scales using model-free, deep reinforcement learning (2018) (11)
Description of DASPKADJOINT: An Adjoint Sensitivity Solver for Difierential-Algebraic Equations (2001) (11)
The Role of Chromatin Density in Cell Population Heterogeneity during Stem Cell Differentiation (2017) (11)
An algorithm for simulation of electrochemical systems with surface-bulk coupling strategies (2009) (11)
Control over single-cell distribution of G1 lengths by WNT governs pluripotency (2019) (11)
Conditions controlling kink crack nucleation out of, and delamination along, a mixed-mode interface crack (2018) (10)
Adaptive mesh methods and software for time-dependent partial differential equations (1998) (10)
Reaction rates for a generalized reaction-diffusion master equation. (2015) (10)
Mesoscopic-microscopic spatial stochastic simulation with automatic system partitioning. (2017) (9)
Parallel sensitivity analysis for DAEs with many parameters (1999) (9)
Regularization of index-1 differential-algebraic equations with rank-deficient constraints (1998) (9)
Advances in Deep Space Exploration via Simulators & Deep Learning (2020) (9)
An efficient, scalable numerical algorithm for the simulation of electrochemical systems on irregular domains (2007) (9)
Optimal control for halo orbit missions (2000) (9)
Reducing Complexity in Management of eScience Computations (2012) (8)
Automatic and portable cloud deployment for scientific simulations (2014) (8)
Regulation of CSF and brain tissue sodium levels by the blood-CSF and blood-brain barriers during migraine (2019) (8)
Reaction rates for reaction-diffusion kinetics on unstructured meshes. (2016) (8)
An arbitrary Lagrangian Eulerian smoothed particle hydrodynamics (ALE-SPH) method with a boundary volume fraction formulation for fluid-structure interaction. (2021) (8)
BERTSurv: BERT-Based Survival Models for Predicting Outcomes of Trauma Patients (2021) (8)
Time dependent solution for acceleration of tau-leaping (2013) (8)
On the Inference of Functional Circadian Networks Using Granger Causality (2015) (8)
Survival Topic Models for Predicting Outcomes for Trauma Patients (2017) (8)
An error estimate for matrix equations (2004) (8)
Effect of excluded volume on 2D discrete stochastic chemical kinetics (2009) (7)
Solution Adapted Mesh Refinement and Sensitivity Analysis for Parabolic Partial Differential Equation Systems (2003) (7)
Efficient Computation of Sensitivities for Ordinary Differential Equation Boundary Value Problems (2002) (7)
General Bayesian Inference over the Stiefel Manifold via the Givens Transform (2017) (7)
Identification of disease states associated with coagulopathy in trauma (2016) (7)
Implicit Hamiltonian Monte Carlo for Sampling Multiscale Distributions (2019) (7)
Intrinsic network activity in human brain organoids (2021) (7)
On obtaining a consistent set of initial values for a system of differential-algebraic equations (1987) (7)
Ordinary Differential Equations (1998) (6)
Coordinating cell polarization and morphogenesis through mechanical feedback (2020) (6)
A model of macroscale deformation and microvibration in skeletal muscle tissue (2009) (6)
Sparse Pathway-Induced Dynamic Network Biomarker Discovery for Early Warning Signal Detection in Complex Diseases (2018) (6)
Convergence of the Iterative Methods for Coordinate- Splitting Formulation in Multibody Dynamics. (1996) (6)
Dynamics of algorithms (2000) (6)
Analysis of the role of thrombomodulin in all-trans retinoic acid treatment of coagulation disorders in cancer patients (2019) (6)
Computational Model for Hyperfibrinolytic Onset of Acute Traumatic Coagulopathy (2018) (6)
Adaptive deployment of model reductions for tau-leaping simulation. (2015) (6)
Regulation of CSF and Brain Tissue Sodium Levels by the Blood-CSF and Blood-Brain Barriers During Migraine (2020) (6)
A Monte Carlo simulation study of lipid bilayer formation on hydrophilic substrates from vesicle solutions. (2006) (6)
Epidemiological modeling in StochSS Live! (2021) (6)
Highly Oscillatory Systems And Periodic-Stability (1995) (6)
Computational model of tranexamic acid on urokinase mediated fibrinolysis (2020) (5)
Model-based Inference of a Directed Network of Circadian Neurons (2018) (5)
Abstractions for Scaling eScience Applications to Distributed Computing Environments - A StratUm Integration Case Study in Molecular Systems Biology (2012) (5)
Constraint Partitioning for Stability in Path-Constrained Dynamic Optimization Problems (2000) (5)
Efficient Solution and Sensitivity Analysis of Partial Differential-Algebraic Equation Systems Application to Corrosion Pit Initiation (2005) (5)
Constraint partitioning for structure in path-constrained dynamic optimization problems (2001) (5)
Computational Techniques for Quantification and Optimization of Mixing in Microfluidic Devices (5)
DYNAMIC OPTIMIZATION OF CHEMICALLY REACTING STAGNATION FLOWS (1998) (4)
DDASAC. Double Precision Differential/Algebraic Sensitivity Analysis Code (1995) (4)
Selecting the Metric in Hamiltonian Monte Carlo (2019) (4)
Optimization of Mixing in an Active Micromixing Device (2003) (4)
A hybrid smoothed dissipative particle dynamics (SDPD) spatial stochastic simulation algorithm (sSSA) for advection-diffusion-reaction problems (2019) (4)
Numerical methods for boundary value problems in differential-algebraic equations (1990) (4)
Graphics Processing Unit Efficient Parallelization of the Stochastic Simulation Algorithm for Chemically Reacting Systems On the (2010) (4)
Validation data for a hybrid smoothed dissipative particle dynamics (SDPD) spatial stochastic simulation algorithm (sSSA) method (2018) (4)
Extracellular detection of neuronal coupling (2021) (4)
What Drives Consumer Choices? Mining Aspects and Opinions on Large Scale Review Data Using Distributed Representation of Words (2016) (4)
Deriving user interface requirements from densely interleaved scientific computing applications (2003) (4)
Sources of intraspecific variation in the collective tempo and synchrony of ant societies. (2019) (3)
One-Step Methods (1998) (3)
A Minimum Free Energy Model of Motor Learning (2019) (3)
Human brain organoid networks (2021) (3)
BioSimulators: a central registry of simulation engines and services for recommending specific tools (2022) (3)
Special Issue on Iterative Methods in Numerical Linear Algebra (1992) (3)
Segmentation-free image processing and analysis of precipitate shapes in 2D and 3D (2017) (3)
Real-Time Simulation of Large-Scale Multibody Systems Using Automated Equation Decoupling Techniques (1994) (3)
Computing spacetime curvature via differential algebraic equations (1996) (3)
Identification of dynamic mass-action biochemical reaction networks using sparse Bayesian methods (2022) (3)
Numerical Scaling Studies of Kinetically-Limited Electrochemical Nucleation and Growth with Accelerated Stochastic Simulations (2014) (3)
Singular implicit ordinary differential equations and constraints (1983) (3)
Regulation of cerebrospinal fluid and brain tissue sodium levels by choroid plexus and brain capillary endothelial cell sodium-potassium pumps during migraine (2019) (3)
Associations of longitudinal D-Dimer and Factor II on early trauma survival risk (2021) (3)
Understanding Coagulopathy using Multi-view Data in the Presence of Sub-Cohorts: A Hierarchical Subspace Approach (2017) (3)
COMPUTATIONAL MODELING OF CHAPERONE INTERACTIONS IN THE ENDOPLASMIC RETICULUM OF SACCHAROMYCES CEREVISIAE (2007) (3)
Direct higher order fuzzy rule-based classification system: Application in mortality prediction (2015) (3)
MODEL-BASED THERAPEUTIC TARGET DISCRIMINATION USING STOCHASTIC SIMULATION AND ROBUSTNESS ANALYSIS IN AN INSULIN SIGNALING PATHWAY (2009) (2)
On Problem Stability (1998) (2)
Multivariate soft repulsive system identification for constructing rule-based classification systems: Application to trauma clinical data (2017) (2)
Efficient Parallel Simulation of an Individual-Based Fish Schooling Model on a Graphics Processing Unit (2008) (2)
Modelling of Detailed Insulin Receptor Kinetics Affects Sensitivity and Noise in the Downstream Signalling Pathway (2010) (2)
A Cure Time Model for Joint Prediction of Outcome and Time-to-Outcome (2015) (2)
Probabilistic User-Level Opinion Detection on Online Social Networks (2014) (2)
Spatial localisation of chaperone distribution in the endoplasmic reticulum of yeast. (2012) (2)
Variational optimisatio by the solution of a series of Hamilton—Jacobi equations (2001) (2)
COMPUTATIONAL CHALLENGES IN THE SOLUTION OF NONLINEAR OSCILLATORY MULTIBODY DYNAMICS SYSTEMS (1995) (2)
More on Differential-Algebraic Equations (1998) (2)
Nested stochastic simulation algorithm for chemical kinetic systems with disparate rates ” [ JCP (2007) (2)
A Framework for the Analysis of Second Order Projection Methods ∗ (2006) (2)
How Much Does It Hurt: A Deep Learning Framework for Chronic Pain Score Assessment (2020) (2)
Regulation of cell-type-specific transcriptomes by microRNA networks during human brain development (2018) (2)
Numerical Solution of Nonlinear Oscillatory Multibody Dynamic Systems. (1996) (2)
A Multimetric Evaluation of Stratified Random Sampling for Classification: A Case Study (2016) (2)
ROBUST TIMEKEEPING IN CIRCADIAN NETWORKS: FROM GENES TO CELLS (2007) (2)
Robust and integrative Bayesian neural networks for likelihood-free parameter inference (2021) (2)
Decision Tree Organization for GUI Generation (2)
Improving Medical Predictions by Irregular Multimodal Electronic Health Records Modeling (2022) (1)
ERROR ESTIMATION FOR REDUCED-ORDER MODELS OF (2005) (1)
WAVOS: a MATLAB toolkit for wavelet analysis and visualization of oscillatory systems (2012) (1)
7. The DAE Home Page (1995) (1)
Relating Disparate Measures of Coagulapathy Using Unorthodox Data : A Hybrid Mechanistic-Statistical Approach (2018) (1)
Systems Analysis for Systems Biology (2010) (1)
OASum: Large-Scale Open Domain Aspect-based Summarization (2022) (1)
MEDEA : A Pluggable Middleware System for Interoperable Program Execution Across Cloud Fabrics (2012) (1)
Parallel simulation of fluid slip in a microchannel (2004) (1)
IMECE 2002-33704 EXAMINATION OF THE SLIP BOUNDARY CONDITION BY μ-PIV AND LATTICE BOLTZMANN SIMULATIONS (2002) (1)
LIFE SCIENCES AND MEDICINE (2011) (1)
Domain Adaptation for Trauma Mortality Prediction in EHRs with Feature Disparity (2021) (1)
A Accelerated Maximum Likelihood Estimation for Stochastic Biochemical Systems (1)
Model Optimization for Deep Space Exploration via Simulators and Deep Learning (2020) (1)
Detecting Opinions in a Temporally Evolving Conversation on Twitter (2015) (1)
Multiscale Stochastic Simulation of Surface Diffusion During Early Stages of Electrodeposition (2012) (1)
Correction for Abel et al., Functional network inference of the suprachiasmatic nucleus (2017) (1)
Empirical Quantitative Analysis of COVID-19 Forecasting Models (2021) (1)
Core module network construction for breast cancer metastasis (2012) (1)
MODELING THE IMPACT OF SPATIAL LOCALIZATION OF PROTEIN FUNCTION IN THE ENDOPLASMIC RETICULUM OF YEAST (2009) (1)
Flexible Modeling of Alzheimer ’ s Disease Progression with I-Splines (2018) (1)
Core module biomarker identification with network exploration for breast cancer metastasis (2012) (1)
Accelerated maximum likelihood parameter estimation for stochastic biochemical systems (2012) (1)
Using DASPK on the TMC CM5. Experiences with two programming models (1993) (1)
PcMSP: A Dataset for Scientific Action Graphs Extraction from Polycrystalline Materials Synthesis Procedure Text (2022) (1)
Automated User Interface Requirements Discovery for Scientific Computing (2003) (1)
Integrating Physiological Time Series and Clinical Notes with Transformer for Early Prediction of Sepsis (2022) (1)
Exposition and Streamlined Formulation of Adaptive Explicit-Implicit Tau-Leaping ∗ (2009) (1)
Sensitivity Analysis of Discrete Stochastic Biological Systems (2004) (1)
Effective Numerical Methods for Vehicle Dynamics (1996) (0)
Interpretable Polynomial Neural Ordinary Differential Equations (2022) (0)
The Role of Dimerisation and Nuclear Transport in the Hes1 Gene Regulatory Network (2013) (0)
Predicting the need for blood transfusion in intensive care units with reinforcement learning (2022) (0)
Enhance Computer Vision (2018) (0)
For Review O nly Identifying Learning in a Visuomotor Skill (2011) (0)
Identification of influential proteins in the classical retinoic acid signaling pathway (2018) (0)
An Analysis of Relation Extraction within Sentences from Wet Lab Protocols (2021) (0)
A Deep Learning Framework for Classification of in vitro Multi-Electrode Array Recordings (2019) (0)
Are Large Language Models Ready for Healthcare? A Comparative Study on Clinical Language Understanding (2023) (0)
2. Theory of DAE's (1995) (0)
Accelerated regression-based summary statistics for discrete stochastic systems via approximate simulators (2021) (0)
Dynamic Phase Extraction: Applications in Pulse Rate Variability (2022) (0)
4. One-Step Methods (1995) (0)
Analysis of the role of thrombomodulin in all-trans retinoic acid treatment of coagulation disorders in cancer patients (2019) (0)
Noise resistant synchronization and collective rhythm switching in a model of animal group locomotion (2022) (0)
Sensitivity analysis and model reduction of nonlinear differential-algebraic systems. Final progress report (1997) (0)
Stochastic simulation service: Towards an integrated development environment for modeling and simulation of stochastic biochemical systems (2012) (0)
Wavelet Analysis Reveals Period Wandering in Circadian Neurons (2009) (0)
Asymptotic expansions and backward analysis for numerical integrators (2017) (0)
Undergraduate Computational Science and Engineering (2011) (0)
A Multiscale Measure for Quantifying Mixing of Passive Scalar Fields (2004) (0)
Asymptotic Stability of Hessenberg DelayDi erential-Algebraic Equations of Retardedor Neutral (1996) (0)
Modeling the neuroanatomic propagation of ALS in the spinal cord (2017) (0)
3. Multistep Methods (1995) (0)
A Multivariate Ensemble Approach for Identification of Biomarkers: Application to Breast Cancer (2014) (0)
Stochastic simulation and systems analysis of insulin-stimulated GLUT4 translocation (2008) (0)
Bayesian Inference over Stiefel Manifold 3 Bayesian Inference of Constrained Parameters Using Transformations (2018) (0)
Mechanical feedback stabilizes budding yeast morphogenesis (2016) (0)
Atomic Scale Resolution for Stochastic Simulations of Electrodeposition at the Micrometer Scale (2013) (0)
On the Numerical Solution ofConstrained (2007) (0)
Computing spacetime curvature via differential-algebraic equations (1996) (0)
Sensitivity analysis and condition estimation of computational models (2003) (0)
Parallel processing for scientific computing: Proceedings. Volume 2 (1993) (0)
Constraint partitioning for solution of path-constrained dynamic optimization problems (2000) (0)
CHEMKIN III. The CHEMKIN-III COLLECTION (1996) (0)
Atomic Scale Resolution for Stochastic Simulations of Electrodeposition Processes At Micrometer Scales (2013) (0)
Spatial stochastic simulation of biochemical systems (2013) (0)
Inference of the Functional Network Controlling Circadian Rhythm (2017) (0)
More Boundary Value Problem Theory and Applications (1998) (0)
5. Software for DAE's (1995) (0)
Wizardry : Automatically Generating Update and Import Wizards for Evolving XML-encoded GUIs (0)
Numerical Methods for Differential-Algebraic Equations in Real-Time Integration of Mechanical Systems. (1996) (0)
Identification of Disease States for Trauma Patients using Commonly Available Hospital Data (2018) (0)
Enhanced Chaperone Clustering Facilitates Protein Folding in the Endoplasmic Reticulum of Yeast (2014) (0)
Systems Biology of Coagulation and Trauma-Induced Coagulopathy (2017) (0)
Asymptotic Stability of Linear Delay Di erentialAlgebraic Equations and Numerical (1996) (0)
An Exponentially Fitted Adams Method of Numerical Integration (1984) (0)
Polarized Stochastic Amplification During Mating in Saccharomyces cerevisiae (2012) (0)
Efficient Solution and Sensitivity Analysis of Partial Differential-Algebraic Equation Systems Modelling Corrosion Pit Initiation (0)
Scalable Bayesian Functional Connectivity Inference for Multi-Electrode Array Recordings (2020) (0)
Basic Methods, Basic Concepts (1998) (0)
Accelerated regression-based summary statistics for discrete stochastic systems via approximate simulators (2021) (0)
Simulations of fracture in coatings with complex microstructures (2014) (0)
Reinforcement Machine Learning (2018) (0)
Dynamic Prompting: A Unified Framework for Prompt Tuning (2023) (0)
Final Technical Report "Multiscale Simulation Algorithms for Biochemical Systems" (2012) (0)
Simulating Yeast Polarization in the Cloud (2015) (0)
Mechanical feedback maintains polarization in budding yeast mating projection growth (2019) (0)
The development of a model of a bacterial phosphorelay signal transduction system (2006) (0)
Linear Multistep Methods (1998) (0)
Final Report: Sensitivity Analysis and Model Reduction of Nonlinear Differential Algebraic Systems, January 1, 1998 - August 31, 1999 (1999) (0)
Chapter 1 Numerical Simulation for Biochemical Kinetics (0)
Stochastic Simulation Service: Towards an Integrated Development Environment for Modeling and Simulation of Biological Processes (2013) (0)
Toward a data-driven model of trauma dynamics (2013) (0)
ABRIDGI G CHEMICAL REACTIO ETWORKS: IT’S A SUBTLE BUSI ESS (2009) (0)
Unraveling the BvgAS Phosphorelay (2006) (0)
Numerical methods for stiff equations and singular perturbation problems: Willard L. Miranker, D. Reidel Publishing Co., Boston 1980, 196pp.; $29.95. (1983) (0)
Empirical Analysis of Machine Learning Configurations for Prediction of Multiple Organ Failure in Trauma Patients (2021) (0)
Decision heuristics in contexts exploiting intrinsic skill (2022) (0)
Multi-View Treelet Transform (2016) (0)
Motor adaptation via distributional learning (2020) (0)
Automated detection of extracellular action potentials from single neurons (2022) (0)
A FORMALISM FOR CONTROL OF ADVECTIVE MIXING (2005) (0)
Associations of longitudinal D-Dimer and Factor II on early trauma survival risk (2021) (0)
MatKB: Semantic Search for Polycrystalline Materials Synthesis Procedures (2023) (0)
Preliminary study: quantification of chronic pain from physiological data (2022) (0)
Few-Shot Document-Level Event Argument Extraction (2022) (0)
Spatial Stochastic Simulation of Polarization in Yeast Mating (2011) (0)
The Role of Chromatin Density in Cell Population Heterogeneity during Stem Cell Differentiation (2017) (0)
VREN: Volleyball Rally Dataset with Expression Notation Language (2022) (0)
Enhancing Transformer Efficiency for Multivariate Time Series Classification (2022) (0)
Multiple Organ Failure Prediction with Classifier-Guided Generative Adversarial Imputation Networks (2021) (0)

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