Manoj Samanta
Indian-American bioinformatician
Manoj Samanta's AcademicInfluence.com Rankings

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Biology
Manoj Samanta's Degrees
- PhD Bioinformatics Stanford University
- Bachelors Biotechnology University of California, Berkeley
Why Is Manoj Samanta Influential?
(Suggest an Edit or Addition)According to Wikipedia, Manoj Pratim Samanta is an Indian-American scientist and engineer working in the field of bioinformatics. Samanta became interested in mathematics at a young age, and was a member of India's team in the 1989 International Mathematical Olympiad. He subsequently graduated from the Indian Institute of Technology, where he received the institute silver medal. In 1998, he received his Ph.D. in electrical engineering from Purdue University under the supervision of Supriyo Datta. He later conducted research on superconductors before becoming interested in biological systems. He is the founder of the Systemix Institute, a genomics research company based in Redmond, Washington. He formerly worked at NASA's Ames Research Center and Hewlett-Packard. He is also the co-founder of Coding4Medicine, an organization aimed at training young people in computational biology, and maintains the blog Homolog.us.
Manoj Samanta's Published Works
Published Works
- Insights into social insects from the genome of the honeybee Apis mellifera (2006) (1356)
- Global Identification of Human Transcribed Sequences with Genome Tiling Arrays (2004) (1102)
- The Genome of the Sea Urchin Strongylocentrotus purpuratus (2006) (1056)
- The Ectocarpus genome and the independent evolution of multicellularity in brown algae (2010) (803)
- Predicting protein functions from redundancies in large-scale protein interaction networks (2003) (310)
- Whole-genome expression profiling of the marine diatom Thalassiosira pseudonana identifies genes involved in silicon bioprocesses (2008) (250)
- Genome-wide transcriptional analysis of flagellar regeneration in Chlamydomonas reinhardtii identifies orthologs of ciliary disease genes. (2005) (223)
- SpBase: the sea urchin genome database and web site (2008) (200)
- Identification of transcribed sequences in Arabidopsis thaliana by using high-resolution genome tiling arrays. (2005) (158)
- Genomic basis for the convergent evolution of electric organs (2014) (150)
- Issues in the analysis of oligonucleotide tiling microarrays for transcript mapping. (2005) (115)
- Computational and transcriptional evidence for microRNAs in the honey bee genome (2007) (103)
- The Transcriptome of the Sea Urchin Embryo (2006) (103)
- Global identification of noncoding RNAs in Saccharomyces cerevisiae by modulating an essential RNA processing pathway. (2006) (81)
- Second-Generation Linkage Maps for the Pacific Oyster Crassostrea gigas Reveal Errors in Assembly of Genome Scaffolds (2015) (62)
- High resolution mapping of Twist to DNA in Drosophila embryos: Efficient functional analysis and evolutionary conservation. (2011) (52)
- A critical reanalysis of the relationship between genomics and well-being (2014) (48)
- Room temperature Coulomb blockade and Coulomb staircase from self‐assembled nanostructures (1996) (47)
- Global snapshot of a protein interaction network - a percolation based approach (2003) (43)
- Evidence for Antisense Transcription Associated with MicroRNA Target mRNAs in Arabidopsis (2009) (35)
- ELECTRICAL TRANSPORT IN JUNCTIONS BETWEEN UNCONVENTIONAL SUPERCONDUCTORS :APPLICATION OF THE GREEN'S-FUNCTION FORMALISM (1998) (25)
- Research article - The genome of the sea urchin Strongylocentrotus purpuratus (2006) (21)
- Unique patterns of transcript and miRNA expression in the South American strong voltage electric eel (Electrophorus electricus) (2015) (17)
- The Ectocarpus genome and brown algal genomics: the Ectocarpus Genome Consortium (2012) (14)
- Effect of midgap states in d-wave superconductors on the flux quantization in tricrystal rings (1997) (13)
- Cwinnower Algorithm for Finding Fuzzy DNA Motifs (2004) (12)
- The myogenic electric organ of Sternopygus macrurus: a non-contractile tissue with a skeletal muscle transcriptome (2016) (12)
- More Questions than Answers: Continued Critical Reanalysis of Fredrickson et al.’s Studies of Genomics and Well-Being (2016) (12)
- Redundancies in Large-scale Protein Interaction Networks (2003) (10)
- Sequence Analysis and Comparative Study of the Protein Subunits of Archaeal RNase P (2016) (9)
- In-depth query of large genomes using tiling arrays. (2007) (9)
- George MW, Gene ER. Insights into social insects from the genome of the honeybee Apis mellifera. Nature (2006) (8)
- Saccular Transcriptome Profiles of the Seasonal Breeding Plainfin Midshipman Fish (Porichthys notatus), a Teleost with Divergent Sexual Phenotypes (2015) (5)
- Genes Preferring Non-AUG Start Codons in Bacteria (2020) (4)
- Sternopygus macrurus electric organ transcriptome and cell size exhibit insensitivity to short-term electrical inactivity (2016) (4)
- Identification of an in vitro transcription‐based artifact affecting oligonucleotide microarrays (2007) (4)
- Analysis of Antisense Expression by Whole Genome Tiling Microarrays and siRNAs Suggests Mis-Annotation of Arabidopsis Orphan Protein-Coding Genes (2010) (4)
- Nucleotide Distribution Patterns in Insect Genomes (2007) (3)
- Josephson Effect in Unconventional Superconductors (1996) (1)
- Reply to ``Comment on `Electrical transport in junctions between unconventional superconductors: Application of the Green's-function formalism' '' (2000) (1)
- Efficient functional analysis and evolutionary conservation embryos : Drosophila High resolution mapping of Twist to DNA in Material Supplemental (2011) (1)
- Properties of skeletal muscle in the teleost Sternopygus macrurus are unaffected by short-term electrical inactivity. (2016) (1)
- University of Groningen More Questions than (2016) (0)
- The properties of skeletal muscle in the teleost Sternopygus macrurus are 2 unaffected by short-term electrical inactivity 3 4 5 6 (2016) (0)
- Supporting Online Material for The Transcriptome of the Sea Urchin Embryo (2006) (0)
- Feature Evaluation of the Support Vector Machine for micro-RNA Target Site Prediction in Arabidopsis thaliana (2008) (0)
- Website on Protein Interaction and Protein Structure Related Work (2003) (0)
- Ultraconserved Sequences in the Honeybee Genome - Are GC-rich Regions Preferred? (2007) (0)
- Novel features in the I-V characteristics in junctions between d-wave superconductors (1997) (0)
- Searching for Patterns in the Complex World of Protein Interactions (2005) (0)
- Unique patterns of transcript and miRNA expression in the South American strong voltage electric eel (Electrophorus electricus) (2015) (0)
- Normalized Cut Algorithm for Automated Assignment of Protein Domains (2002) (0)
- Modeling of Switching and Hysteresis in Molecular Transport (2002) (0)
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